BEGAIN-AS1

Summary

BEGAIN-AS1 (BEGAIN antisense RNA 1, HGNC:58465) is a long non-coding RNA gene on chromosome 14q32.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58465
Approved symbol	BEGAIN-AS1
Name	BEGAIN antisense RNA 1
Location	14q32.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259031
Ensembl biotype	lncRNA
Entrez	141858813

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000553301

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000553301 — 2 exons

Exon	Start	End
ENSE00002466361	100538939	100539211
ENSE00002484652	100540130	100540409

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 83.95.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right hemisphere of cerebellum	UBERON:0014890	83.95	gold quality
sural nerve	UBERON:0015488	83.63	gold quality
cerebellar hemisphere	UBERON:0002245	82.52	gold quality
cerebellar cortex	UBERON:0002129	82.38	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.29	silver quality
cerebellum	UBERON:0002037	82.26	gold quality
pituitary gland	UBERON:0000007	73.45	gold quality
body of pancreas	UBERON:0001150	71.85	gold quality
adenohypophysis	UBERON:0002196	71.36	gold quality
pancreas	UBERON:0001264	70.15	gold quality
bone marrow cell	CL:0002092	69.99	silver quality
right frontal lobe	UBERON:0002810	69.08	gold quality
tibial nerve	UBERON:0001323	68.72	gold quality
frontal cortex	UBERON:0001870	67.98	gold quality
prefrontal cortex	UBERON:0000451	67.87	gold quality
mucosa of stomach	UBERON:0001199	67.53	gold quality
cortical plate	UBERON:0005343	67.25	gold quality
brain	UBERON:0000955	67.12	gold quality
left uterine tube	UBERON:0001303	66.34	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	65.61	gold quality
nucleus accumbens	UBERON:0001882	64.88	gold quality
cerebral cortex	UBERON:0000956	64.55	gold quality
anterior cingulate cortex	UBERON:0009835	64.43	gold quality
primary visual cortex	UBERON:0002436	64.16	gold quality
ganglionic eminence	UBERON:0004023	64.12	gold quality
amygdala	UBERON:0001876	63.98	gold quality
bone marrow	UBERON:0002371	63.63	gold quality
Brodmann (1909) area 9	UBERON:0013540	63.62	gold quality
superior frontal gyrus	UBERON:0002661	63.52	gold quality
putamen	UBERON:0001874	63.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.37

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.