BFSP2-AS1

Summary

BFSP2-AS1 (BFSP2 antisense RNA 1, HGNC:28425) is a long non-coding RNA gene on chromosome 3q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:28425
Approved symbol	BFSP2-AS1
Name	BFSP2 antisense RNA 1
Location	3q22.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	MGC2848
Ensembl gene	ENSG00000249993
Ensembl biotype	lncRNA
Entrez	85003
RNAcentral	URS0002853A08 — lncRNA, 1151 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000515542, ENST00000833663, ENST00000833664, ENST00000833665, ENST00000833666, ENST00000833667, ENST00000833668, ENST00000833669, ENST00000833670, ENST00000833671, ENST00000833672, ENST00000833673, ENST00000833674, ENST00000833675, ENST00000833676, ENST00000833677, ENST00000833678, ENST00000833679

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000515542 — 5 exons

Exon	Start	End
ENSE00002019806	133448781	133448895
ENSE00002025033	133455329	133455463
ENSE00002035299	133429269	133429709
ENSE00002045479	133445405	133445575
ENSE00002059208	133455745	133455776

Expression profiles

Bgee: expression breadth ubiquitous, 139 present calls, max score 79.69.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1399 / max 26.0988, expressed in 53 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
44652	0.0746	45
44644	0.0485	8
44645	0.0089	4
44646	0.0080	3

Top tissues by expression

228 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.69	gold quality
bone marrow cell	CL:0002092	67.56	silver quality
cortical plate	UBERON:0005343	63.26	gold quality
oocyte	CL:0000023	62.92	gold quality
secondary oocyte	CL:0000655	62.29	gold quality
corpus epididymis	UBERON:0004359	61.81	silver quality
lymph node	UBERON:0000029	60.35	gold quality
adrenal tissue	UBERON:0018303	60.05	gold quality
ganglionic eminence	UBERON:0004023	59.81	gold quality
endothelial cell	CL:0000115	57.53	gold quality
right hemisphere of cerebellum	UBERON:0014890	56.77	gold quality
small intestine Peyer’s patch	UBERON:0003454	56.28	gold quality
vermiform appendix	UBERON:0001154	55.00	gold quality
small intestine	UBERON:0002108	54.72	gold quality
cerebellar cortex	UBERON:0002129	54.64	gold quality
cerebellar hemisphere	UBERON:0002245	54.64	gold quality
hindlimb stylopod muscle	UBERON:0004252	54.56	gold quality
buccal mucosa cell	CL:0002336	53.94	silver quality
cerebellum	UBERON:0002037	53.56	gold quality
tonsil	UBERON:0002372	53.50	gold quality
calcaneal tendon	UBERON:0003701	53.40	silver quality
monocyte	CL:0000576	53.16	silver quality
parotid gland	UBERON:0001831	52.37	gold quality
muscle of leg	UBERON:0001383	51.55	gold quality
islet of Langerhans	UBERON:0000006	51.53	gold quality
caecum	UBERON:0001153	50.54	gold quality
spleen	UBERON:0002106	50.29	gold quality
gastrocnemius	UBERON:0001388	50.27	gold quality
adenohypophysis	UBERON:0002196	49.77	gold quality
caput epididymis	UBERON:0004358	49.64	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.