BID
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Summary
BID (BH3 interacting domain death agonist, HGNC:1050) is a protein-coding gene on chromosome 22q11.21, encoding BH3-interacting domain death agonist (P55957). Induces caspases and apoptosis.
This gene encodes a death agonist that heterodimerizes with either agonist BAX or antagonist BCL2, and thus regulate apoptosis. The encoded protein is a member of the BCL-2 family of cell death regulators. It is a mediator of mitochondrial damage induced by caspase-8 (CASP8); CASP8 cleaves this encoded protein, and the COOH-terminal part translocates to mitochondria where it triggers cytochrome c release. Multiple alternatively spliced transcript variants have been found.
Source: NCBI Gene 637 — RefSeq curated summary.
At a glance
- GWAS associations: 4
- Clinical variants (ClinVar): 61 total
- Druggable target: yes — 4 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001196
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1050 |
| Approved symbol | BID |
| Name | BH3 interacting domain death agonist |
| Location | 22q11.21 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000015475 |
| Ensembl biotype | protein_coding |
| OMIM | 601997 |
| Entrez | 637 |
Gene structure
Transcript identifiers
Ensembl transcripts: 28 — 24 protein_coding, 2 protein_coding_CDS_not_defined, 2 retained_intron
ENST00000317361, ENST00000342111, ENST00000399765, ENST00000399767, ENST00000473439, ENST00000494097, ENST00000550946, ENST00000551952, ENST00000552886, ENST00000614949, ENST00000622694, ENST00000890844, ENST00000890845, ENST00000890846, ENST00000890847, ENST00000890848, ENST00000890849, ENST00000890850, ENST00000890851, ENST00000890852, ENST00000890853, ENST00000890854, ENST00000890855, ENST00000890856, ENST00000931697, ENST00000931698, ENST00000951445, ENST00000951446
RefSeq mRNA: 7 — MANE Select: NM_001196
NM_001196, NM_001244567, NM_001244569, NM_001244570, NM_001244572, NM_197966, NM_197967
CCDS: CCDS13747, CCDS13748, CCDS13749
Canonical transcript exons
ENST00000622694 — 6 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001540140 | 17774381 | 17774469 |
| ENSE00001946765 | 17734138 | 17735591 |
| ENSE00003526724 | 17750105 | 17750174 |
| ENSE00003542752 | 17738017 | 17738229 |
| ENSE00003565087 | 17743803 | 17744013 |
| ENSE00003689682 | 17739349 | 17739488 |
Expression profiles
Bgee: expression breadth ubiquitous, 253 present calls, max score 96.45.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 49.3738 / max 2151.9431, expressed in 1788 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 193095 | 44.1736 | 1786 |
| 193096 | 4.5852 | 1631 |
| 193094 | 0.3449 | 130 |
| 193093 | 0.2379 | 83 |
| 193092 | 0.0322 | 8 |
Top tissues by expression
284 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| monocyte | CL:0000576 | 96.45 | gold quality |
| leukocyte | CL:0000738 | 96.14 | gold quality |
| mononuclear cell | CL:0000842 | 96.11 | gold quality |
| blood | UBERON:0000178 | 96.02 | gold quality |
| granulocyte | CL:0000094 | 95.97 | gold quality |
| pancreatic ductal cell | CL:0002079 | 93.04 | gold quality |
| bone marrow | UBERON:0002371 | 92.29 | gold quality |
| right frontal lobe | UBERON:0002810 | 91.43 | gold quality |
| cortical plate | UBERON:0005343 | 91.17 | gold quality |
| bone marrow cell | CL:0002092 | 90.87 | gold quality |
| prefrontal cortex | UBERON:0000451 | 90.00 | gold quality |
| periodontal ligament | UBERON:0008266 | 89.98 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 89.96 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 89.76 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 89.58 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 89.58 | gold quality |
| cerebellar cortex | UBERON:0002129 | 89.56 | gold quality |
| right lobe of liver | UBERON:0001114 | 89.53 | gold quality |
| spleen | UBERON:0002106 | 89.31 | gold quality |
| cingulate cortex | UBERON:0003027 | 89.15 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 89.03 | gold quality |
| ganglionic eminence | UBERON:0004023 | 88.92 | gold quality |
| caudate nucleus | UBERON:0001873 | 88.87 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 88.86 | gold quality |
| amygdala | UBERON:0001876 | 88.45 | gold quality |
| nucleus accumbens | UBERON:0001882 | 88.24 | gold quality |
| vermiform appendix | UBERON:0001154 | 88.11 | gold quality |
| putamen | UBERON:0001874 | 87.94 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 87.68 | gold quality |
| cerebellum | UBERON:0002037 | 87.62 | gold quality |
Single-cell (SCXA)
Detected in 10 experiment(s), a significant marker in 10.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-4 | yes | 69.58 |
| E-MTAB-8142 | yes | 63.77 |
| E-CURD-122 | yes | 33.82 |
| E-HCAD-13 | yes | 20.58 |
| E-MTAB-9467 | yes | 19.41 |
| E-HCAD-1 | yes | 18.09 |
| E-CURD-88 | yes | 12.67 |
| E-CURD-112 | yes | 11.04 |
| E-CURD-46 | yes | 9.03 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): E2F1, ETS1, FOXO1, HIF1A, TP53, TP73, ZBTB16
miRNA regulators (miRDB)
65 targeting BID, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-6793-5P | 99.97 | 65.95 | 758 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-3143 | 99.93 | 71.96 | 3104 |
| HSA-MIR-1297 | 99.91 | 73.41 | 3162 |
| HSA-MIR-4493 | 99.90 | 66.48 | 977 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-6783-3P | 99.89 | 67.92 | 2059 |
| HSA-MIR-1343-3P | 99.89 | 66.78 | 1815 |
| HSA-MIR-12119 | 99.87 | 68.35 | 1653 |
| HSA-MIR-579-3P | 99.86 | 71.66 | 3628 |
| HSA-MIR-664B-3P | 99.84 | 71.65 | 3590 |
| HSA-MIR-3133 | 99.81 | 70.92 | 3506 |
| HSA-MIR-4694-3P | 99.79 | 69.53 | 2640 |
| HSA-MIR-26A-5P | 99.78 | 73.52 | 2303 |
| HSA-MIR-26B-5P | 99.78 | 73.51 | 2305 |
| HSA-MIR-2681-5P | 99.75 | 67.64 | 1655 |
| HSA-MIR-4465 | 99.71 | 72.56 | 2096 |
| HSA-MIR-4502 | 99.65 | 66.99 | 1021 |
| HSA-MIR-6757-3P | 99.63 | 66.88 | 1089 |
| HSA-MIR-7152-5P | 99.60 | 69.33 | 2094 |
| HSA-MIR-4649-3P | 99.56 | 66.90 | 1783 |
Literature-anchored findings (GeneRIF, showing 40)
- tBid-induced permeabilization of the outer membrane permits release of cytochrome c and Smac/DIABLO from all domains of intermembrane space. tBid-induced loss of DeltaPsi(m) occurs after cytochrome c release and reflects impairment of oxidative metabolism (PMID:11741882)
- Cytochrome c release upon Fas receptor activation on translocation of full-length bid (PMID:11790791)
- tBID Homooligomerizes in the mitochondrial membrane to induce apoptosis (PMID:11805084)
- calpain-mediated Bid cleavage and calpain-independent Bak modulation: two separate pathways in cisplatin-induced apoptosis (PMID:11940658)
- These data strongly suggest that in TNF-induced apoptosis, Hsp72 specifically interferes with the Bid-dependent apoptotic pathway via inhibition of JNK. (PMID:11971973)
- Cleavage of Bid is required for tyrosine and phenylalanine deficiency-induced apoptosis of human A375 melanoma cells (PMID:12061801)
- Bax oligomerization in mitochondrial membranes requires tBid (caspase-8-cleaved Bid) and a mitochondrial protein (PMID:12193163)
- Bid, Bax, and lipids cooperate to form supramolecular openings in the outer mitochondrial membrane (PMID:12419244)
- one or more distinct cellular mechanisms regulate Bid cleavage by caspases 8 and 3 in situ. (PMID:12598529)
- identified for the first time a predominant role for the caspase-8/Bid pathway in signaling associated with hyperoxic lung injury and cell death in vivo and in vitro (PMID:12754217)
- The helix H6 of tBid controls mitochondrial binding. A 33 amino acid long domain, which encompassed H6 and H7, behaved as the minimum domain in tBid that was sufficient for mitochondrial binding. (PMID:12766488)
- BID cleavage requires caspase 8 in the course of p53-dependent apoptosis triggered by fast neutrons in lymphoid cells (PMID:12804595)
- Bid-mediated apoptosis requires Bax and Bak (PMID:12808108)
- Bid cleavage by granzyme B is prevented during blockage of CD8T cell lysis by herpes simplex virus-1 Us3 protein kinase (PMID:12934063)
- BID has a role in mediating apoptosis induced by lysosomal disruption (PMID:14581476)
- three novel endogenously expressed isoforms of Bid are distinct in their expression, their cellular localization, and their effects upon cellular apoptosis (PMID:14583606)
- H pylori may enhance Bid, Bax and Bcl-2 mRNA levels and cause deregulation of these apoptosis-associated genes expressions, which may play a role during development of gastric adenocarcinoma induced by H pylori. (PMID:14716828)
- BID is a target of PLZF repression and a candidate gene to mediate the PLZF-induced resistance to apoptosis (PMID:14769944)
- Data show that oxygen deprivation cancer cells provoked decreased mRNA and protein levels of proapoptotic Bid and Bad, and that hypoxia-inducible factor 1 (HIF-1) was dispensable for the down-regulation of Bad but required for that of Bid. (PMID:15024076)
- Bid, cleaved by an undefined aspartate-specific protease, can be a key mediator of the apoptotic response to DNA-damaging anticancer regimens (PMID:15117953)
- Data report the characterization and conformation of tBid protein in lipid membrane environments. (PMID:15123718)
- BID cleavage requires caspase 2 (PMID:15173176)
- The amphipathic helix alpha 7 of Bid inserts in membranes as part of the alpha 6-alpha 7 hairpins in a model chimeric system, showing direct potentiality for this Bid fragment to acquire a membrane inserted state. (PMID:15323553)
- a more detailed model for the reorganization of the structure of BID on membranes (PMID:15501827)
- a specific interaction between Bax Halpha1 and their BH3 domains allows Bid and PUMA to function as “death agonists” of Bax (PMID:15574335)
- Bid mediates apoptotic synergy between TRAIL and DNA damage (PMID:15615731)
- removal of N-terminal domains of Bid by caspase-8 and Mcl-1 by caspase-3 enables the maximal mitochondrial perturbation that potentiates TRAIL-induced apoptosis (PMID:15637055)
- phosphatidylethanolamine could not induce dissociation of caspase-8 cleavage product, tBid, from the amino terminal fragment, nBid (PMID:15809076)
- Cathepsin B substrate, BID, serves as molecular switch between apotosis and autophagy in camptothecin treated breast cancer cells. (PMID:16077201)
- proteolytic activation of Bid and the subsequent induction of the mitochondrial apoptotic pathway through Bax/Bak is essential for apoptosis triggered by caspase-2 (PMID:16172118)
- Data demonstrate a novel regulation of tBid by Mcl-1 through protein-protein interaction in apoptotic signaling from death receptors to mitochondria. (PMID:16380381)
- Peptide = to BH3 region of proapoptotic protein BID, bound in cleft of antiapoptotic protein BCL-w. Binding induced major conformational rearrangements in both peptide & protein components & led to displacement & unfolding of BCL-w C-terminal alpha-helix. (PMID:16475813)
- MAPK pathway inhibits TRAIL-induced apoptosis in MCF-7 cells by prohibiting anchoring of tBid to the mitochondrial membrane. (PMID:16485030)
- Acyl coenzyme A-binding protein has a role in augmenting bid-induced mitochondrial damage and cell death by activating mu-calpain (PMID:16908521)
- Bid was cleaved upon ASC activation, and suppression of endogenous Bid expression using small-interfering RNAs in type-II cells reduced the ASC-mediated apoptosis (PMID:16964285)
- tBID engages BAX to trigger its pro-apoptotic activity (PMID:16987815)
- membrane targeting of stapled BID BH3 optimizes its ability to activate BAX, supporting a model in which BID directly engages BAX to trigger mitochondrial apoptosis (PMID:17052454)
- Activator BH3-only occupation of BCL2 may prime cancer cells for death, offering a potential explanation for the marked chemosensitivity of certain cancers. (PMID:17200714)
- These findings indicate that phosphorylation of PLS3 by PKC-delta induces PLS3 activation to facilitate mitochondrial targeting of tBid and apoptosis. (PMID:17226776)
- results indicate that BH3-only proteins induce apoptosis at least primarily by engaging the multiple pro-survival relatives guarding Bax and Bak (PMID:17289999)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Bid | ENSMUSG00000004446 |
| rattus_norvegicus | Bid | ENSRNOG00000012439 |
Protein
Protein identifiers
BH3-interacting domain death agonist — P55957 (reviewed: P55957)
Alternative names: p22 BID
All UniProt accessions (3): P55957, A8ASI8, B2ZP79
UniProt curated annotations — full annotation on UniProt →
Function. Induces caspases and apoptosis. Counters the protective effect of BCL2. Induces caspase activation and apoptosis. Translocates to mitochondria following cleavage and disrupts the outer mitochondrial membrane leading to the release of cytochrome c. Induces ICE-like proteases and apoptosis. Induces ICE-like proteases and apoptosis. Does not induce apoptosis. Induces ICE-like proteases and apoptosis.
Subunit / interactions. Forms heterodimers either with the pro-apoptotic protein BAX or the anti-apoptotic protein BCL2. Interacts with PLEKHN1. Interacts with humanin; forms fibers with humanin which results in BID conformational changes and sequestering of BID into the fibers, preventing BID activation. Interacts with ITCH. Interacts with humanin; the interaction prevents BID-induced apoptosis. Interacts with MTCH2.
Subcellular location. Cytoplasm. Mitochondrion membrane. Mitochondrion outer membrane Mitochondrion membrane Mitochondrion membrane Cytoplasm Cytoplasm Mitochondrion membrane.
Tissue specificity. Expressed in spleen, pancreas and placenta (at protein level). Expressed in lung, pancreas and spleen (at protein level). Expressed in lung and pancreas (at protein level).
Post-translational modifications. TNF induces caspase-mediated cleavage into a major p15 and minor p13 and p11 products. Cleaved by CASP6 or CASP8 into a major p15 and minor p13 products, leading to release of cytochrome c. Also cleaved by GZMK to generate p15. Ubiquitinated by ITCH; ubiquitination results in proteasome-dependent degradation.
Domain organisation. Intact BH3 motif is required by BIK, BID, BAK, BAD and BAX for their pro-apoptotic activity and for their interaction with anti-apoptotic members of the Bcl-2 family.
Isoforms (4)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P55957-1 | 1, BID(L) | yes |
| P55957-2 | 2, BID(EL) | |
| P55957-3 | 3, BID(S) | |
| P55957-4 | 4, BID(ES) |
RefSeq proteins (7): NP_001187, NP_001231496, NP_001231498, NP_001231499, NP_001231501, NP_932070, NP_932071 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR010479 | BID | Family |
| IPR020728 | Bcl2_BH3_motif_CS | Conserved_site |
| IPR036834 | Bcl-2-like_sf | Homologous_superfamily |
Pfam: PF06393
UniProt features (31 total): helix 10, chain 4, splice variant 4, modified residue 3, sequence variant 3, site 3, strand 2, turn 1, short sequence motif 1
Structure
Experimental structures (PDB)
17 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7QTW | X-RAY DIFFRACTION | 1.41 |
| 5C3F | X-RAY DIFFRACTION | 1.43 |
| 7M5A | X-RAY DIFFRACTION | 1.5 |
| 5AJJ | X-RAY DIFFRACTION | 1.75 |
| 4ZEQ | X-RAY DIFFRACTION | 1.8 |
| 7M5B | X-RAY DIFFRACTION | 1.85 |
| 4QVE | X-RAY DIFFRACTION | 2.05 |
| 4ZII | X-RAY DIFFRACTION | 2.19 |
| 4ZIG | X-RAY DIFFRACTION | 2.2 |
| 4BD2 | X-RAY DIFFRACTION | 2.21 |
| 8SM5 | X-RAY DIFFRACTION | 2.61 |
| 7P33 | X-RAY DIFFRACTION | 2.79 |
| 1ZY3 | SOLUTION NMR | |
| 2BID | SOLUTION NMR | |
| 2KBW | SOLUTION NMR | |
| 2M5B | SOLUTION NMR | |
| 2M5I | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P55957-F1 | 63.12 | 0.00 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 60–61 (cleavage; by casp6); 75–76 (cleavage;by casp6); 99–100 (cleavage)
Post-translational modifications (3): 78, 1, 54
Function
Pathways and Gene Ontology
Reactome pathways
15 pathways
| ID | Pathway |
|---|---|
| R-HSA-111447 | Activation of BAD and translocation to mitochondria |
| R-HSA-111452 | Activation and oligomerization of BAK protein |
| R-HSA-111453 | BH3-only proteins associate with and inactivate anti-apoptotic BCL-2 members |
| R-HSA-114294 | Activation, translocation and oligomerization of BAX |
| R-HSA-6803204 | TP53 Regulates Transcription of Genes Involved in Cytochrome C Release |
| R-HSA-75108 | Activation, myristolyation of BID and translocation to mitochondria |
| R-HSA-109581 | Apoptosis |
| R-HSA-109606 | Intrinsic Pathway for Apoptosis |
| R-HSA-114452 | Activation of BH3-only proteins |
| R-HSA-212436 | Generic Transcription Pathway |
| R-HSA-3700989 | Transcriptional Regulation by TP53 |
| R-HSA-5357801 | Programmed Cell Death |
| R-HSA-5633008 | TP53 Regulates Transcription of Cell Death Genes |
| R-HSA-73857 | RNA Polymerase II Transcription |
| R-HSA-74160 | Gene expression (Transcription) |
MSigDB gene sets: 438 (showing top):
RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_CELL_CYCLE_PHASE_TRANSITION, GOBP_PROTEIN_TARGETING, GOBP_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, DARWICHE_SKIN_TUMOR_PROMOTER_DN, DARWICHE_PAPILLOMA_RISK_LOW_DN, DARWICHE_PAPILLOMA_RISK_HIGH_UP, DARWICHE_SQUAMOUS_CELL_CARCINOMA_UP, GOBP_ESTABLISHMENT_OF_PROTEIN_LOCALIZATION_TO_ORGANELLE, RAMJAUN_APOPTOSIS_BY_TGFB1_VIA_MAPK1_DN, GOBP_POSITIVE_REGULATION_OF_ORGANELLE_ORGANIZATION, GOBP_REGULATION_OF_CELLULAR_COMPONENT_BIOGENESIS, GOBP_NEGATIVE_REGULATION_OF_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_IN_RESPONSE_TO_DNA_DAMAGE, GOBP_MITOCHONDRIAL_TRANSPORT, GOBP_POSITIVE_REGULATION_OF_RELEASE_OF_CYTOCHROME_C_FROM_MITOCHONDRIA
GO Biological Process (32): release of cytochrome c from mitochondria (GO:0001836), obsolete protein targeting to mitochondrion (GO:0006626), extrinsic apoptotic signaling pathway via death domain receptors (GO:0008625), apoptotic mitochondrial changes (GO:0008637), positive regulation of mitochondrial membrane potential (GO:0010918), positive regulation of protein-containing complex assembly (GO:0031334), regulation of T cell proliferation (GO:0042129), signal transduction in response to DNA damage (GO:0042770), mitochondrial ATP synthesis coupled electron transport (GO:0042775), positive regulation of apoptotic process (GO:0043065), regulation of epithelial cell proliferation (GO:0050678), neuron apoptotic process (GO:0051402), protein-containing complex assembly (GO:0065003), establishment of protein localization to membrane (GO:0090150), positive regulation of release of cytochrome c from mitochondria (GO:0090200), hepatocyte apoptotic process (GO:0097284), mitochondrial outer membrane permeabilization (GO:0097345), supramolecular fiber organization (GO:0097435), negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (GO:1902230), regulation of G1/S transition of mitotic cell cycle (GO:2000045), positive regulation of fibroblast apoptotic process (GO:2000271), positive regulation of extrinsic apoptotic signaling pathway (GO:2001238), positive regulation of intrinsic apoptotic signaling pathway (GO:2001244), apoptotic process (GO:0006915), cellular response to stress (GO:0033554), intracellular signal transduction (GO:0035556), regulation of apoptotic process (GO:0042981), extrinsic apoptotic signaling pathway (GO:0097191), regulation of mitochondrial membrane permeability involved in apoptotic process (GO:1902108), regulation of intracellular signal transduction (GO:1902531), regulation of apoptotic signaling pathway (GO:2001233), positive regulation of apoptotic signaling pathway (GO:2001235)
GO Molecular Function (4): death receptor binding (GO:0005123), ubiquitin protein ligase binding (GO:0031625), cysteine-type endopeptidase regulator activity involved in apoptotic process (GO:0043028), protein binding (GO:0005515)
GO Cellular Component (6): mitochondrion (GO:0005739), mitochondrial outer membrane (GO:0005741), cytosol (GO:0005829), membrane (GO:0016020), cytoplasm (GO:0005737), mitochondrial membrane (GO:0031966)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Intrinsic Pathway for Apoptosis | 5 |
| Activation of BH3-only proteins | 1 |
| TP53 Regulates Transcription of Cell Death Genes | 1 |
| Programmed Cell Death | 1 |
| Apoptosis | 1 |
| RNA Polymerase II Transcription | 1 |
| Generic Transcription Pathway | 1 |
| Transcriptional Regulation by TP53 | 1 |
| Gene expression (Transcription) | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| apoptotic process | 3 |
| cellular anatomical structure | 3 |
| apoptotic signaling pathway | 2 |
| mitochondrion | 2 |
| cytoplasm | 2 |
| apoptotic mitochondrial changes | 1 |
| extrinsic apoptotic signaling pathway | 1 |
| mitochondrion organization | 1 |
| positive regulation of membrane potential | 1 |
| regulation of mitochondrial membrane potential | 1 |
| regulation of protein-containing complex assembly | 1 |
| positive regulation of cellular component biogenesis | 1 |
| positive regulation of cellular component organization | 1 |
| protein-containing complex assembly | 1 |
| T cell proliferation | 1 |
| regulation of lymphocyte proliferation | 1 |
| regulation of T cell activation | 1 |
| DNA damage response | 1 |
| intracellular signal transduction | 1 |
| ATP synthesis coupled electron transport | 1 |
| regulation of apoptotic process | 1 |
| positive regulation of programmed cell death | 1 |
| regulation of cell population proliferation | 1 |
| epithelial cell proliferation | 1 |
| cellular component assembly | 1 |
| protein-containing complex organization | 1 |
| establishment of protein localization | 1 |
| localization within membrane | 1 |
| release of cytochrome c from mitochondria | 1 |
| positive regulation of organelle organization | 1 |
| regulation of release of cytochrome c from mitochondria | 1 |
| epithelial cell apoptotic process | 1 |
| positive regulation of mitochondrial membrane permeability involved in apoptotic process | 1 |
| cellular component organization | 1 |
| intrinsic apoptotic signaling pathway in response to DNA damage | 1 |
| regulation of intrinsic apoptotic signaling pathway in response to DNA damage | 1 |
| negative regulation of intrinsic apoptotic signaling pathway | 1 |
| G1/S transition of mitotic cell cycle | 1 |
| regulation of mitotic cell cycle phase transition | 1 |
| regulation of cell cycle G1/S phase transition | 1 |
Protein interactions and networks
STRING
750 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| BID | BCL2 | P10415 | 921 |
| BID | BAX | P55269 | 914 |
| BID | CASP8 | Q14790 | 817 |
| BID | BCL2L11 | O43521 | 737 |
| BID | DIABLO | Q9NR28 | 725 |
| BID | MCL1 | Q07820 | 724 |
| BID | MTCH2 | Q9Y6C9 | 710 |
| BID | CYCS | P00001 | 685 |
| BID | NOD2 | Q9HC29 | 680 |
| BID | BAD | Q92934 | 678 |
| BID | BAK1 | Q16611 | 656 |
| BID | ATP6V1E1 | P36543 | 649 |
| BID | CFLAR | O15519 | 646 |
| BID | CASP9 | P55211 | 644 |
| BID | BBC3 | Q96PG8 | 627 |
IntAct
90 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| BCL2L1 | TP53 | psi-mi:“MI:0915”(physical association) | 0.880 |
| BID | BCL2 | psi-mi:“MI:0407”(direct interaction) | 0.870 |
| BCL2 | BID | psi-mi:“MI:0915”(physical association) | 0.870 |
| BID | BCL2 | psi-mi:“MI:0915”(physical association) | 0.870 |
| BID | BCL2 | psi-mi:“MI:0914”(association) | 0.870 |
| BCL2L1 | BCL2L11 | psi-mi:“MI:0914”(association) | 0.870 |
| BCL2L1 | BID | psi-mi:“MI:0407”(direct interaction) | 0.860 |
| BID | BCL2L1 | psi-mi:“MI:0407”(direct interaction) | 0.860 |
| BAX | BID | psi-mi:“MI:0915”(physical association) | 0.820 |
| BAX | BID | psi-mi:“MI:0407”(direct interaction) | 0.820 |
| BID | BAX | psi-mi:“MI:0915”(physical association) | 0.820 |
| BAX | BID | psi-mi:“MI:2364”(proximity) | 0.820 |
| BID | BAX | psi-mi:“MI:0407”(direct interaction) | 0.820 |
| BCL2L2 | BID | psi-mi:“MI:0407”(direct interaction) | 0.810 |
| BID | BCL2L2 | psi-mi:“MI:0407”(direct interaction) | 0.810 |
| BID | BAK1 | psi-mi:“MI:0407”(direct interaction) | 0.760 |
| BAK1 | BID | psi-mi:“MI:0407”(direct interaction) | 0.760 |
| BID | BAK1 | psi-mi:“MI:0915”(physical association) | 0.760 |
| BCL2L1 | BID | psi-mi:“MI:0407”(direct interaction) | 0.750 |
| BID | BCL2L1 | psi-mi:“MI:2364”(proximity) | 0.750 |
BioGRID (194): BID (Protein-peptide), BCL2 (Reconstituted Complex), BID (Affinity Capture-Western), BID (Affinity Capture-Western), BID (Co-fractionation), REL (Two-hybrid), AHCYL1 (Two-hybrid), BID (Affinity Capture-RNA), BID (Affinity Capture-RNA), BAK1 (Protein-peptide), BID (Protein-peptide), BID (Protein-peptide), BID (Protein-peptide), BID (Protein-peptide), BID (Protein-peptide)
ESM2 similar proteins: A0JMW6, A1L1L2, A1L2I9, A1L3G9, A4FV45, A7Z033, E7FE40, F1QB30, O02703, O08734, O77737, P53563, P55957, P70345, P70444, Q07812, Q07813, Q07816, Q07817, Q0II48, Q16611, Q1M161, Q1RMX3, Q45T69, Q568Z0, Q5BLE2, Q5EAU9, Q63690, Q64373, Q6DC66, Q6GR21, Q6NRB7, Q7T381, Q8BK03, Q8BM55, Q8BXV2, Q8JGM8, Q8K1H7, Q8N4U5, Q8WY22
Diamond homologs: P55957, P70444, Q4JHS0, Q8JGM8, Q9JLT6
SIGNOR signaling
32 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| BID | up-regulates | BAK1 | binding |
| BID | up-regulates | BAX | binding |
| MTCH2 | up-regulates | BID | relocalization |
| MTCH2 | up-regulates | BID | binding |
| “ER stress” | up-regulates | BID | |
| BID | “down-regulates activity” | BCL2L1 | binding |
| CSNK1A1 | “up-regulates activity” | BID | phosphorylation |
| CSNK1E | “up-regulates activity” | BID | phosphorylation |
| CSNK2A1 | “up-regulates activity” | BID | phosphorylation |
| CSNK2A2 | “up-regulates activity” | BID | phosphorylation |
| CSNK2B | “up-regulates activity” | BID | phosphorylation |
| “Caspase 8 complex” | “up-regulates activity” | BID | cleavage |
| “Caspase-2 PIDDosome” | “up-regulates activity” | BID | cleavage |
| “HIF-1 complex” | “down-regulates quantity by repression” | BID | “transcriptional regulation” |
| ITCH | “down-regulates quantity by destabilization” | BID | ubiquitination |
| hsa-miR-491-5p | “up-regulates quantity by expression” | BID | “post transcriptional regulation” |
| MAPK8 | “up-regulates activity” | BID | phosphorylation |
| MAPK9 | “up-regulates activity” | BID | phosphorylation |
| ATM | “down-regulates activity” | BID | phosphorylation |
| BID | “up-regulates activity” | CYCS | |
| CASP8 | “up-regulates activity” | BID | cleavage |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 56 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Intrinsic Pathway for Apoptosis | 7 | 55.4× | 2e-08 |
| Apoptosis | 7 | 31.8× | 5e-07 |
| Programmed Cell Death | 7 | 27.7× | 1e-06 |
| Interleukin-4 and Interleukin-13 signaling | 5 | 13.9× | 1e-03 |
| Cytokine Signaling in Immune system | 7 | 7.7× | 1e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| release of cytochrome c from mitochondria | 8 | 117.0× | 6e-13 |
| motor neuron apoptotic process | 5 | 117.0× | 7e-08 |
| negative regulation of anoikis | 5 | 92.4× | 2e-07 |
| extrinsic apoptotic signaling pathway in absence of ligand | 9 | 87.8× | 4e-13 |
| B cell homeostasis | 5 | 58.5× | 2e-06 |
| regulation of mitochondrial membrane potential | 5 | 56.6× | 2e-06 |
| intrinsic apoptotic signaling pathway in response to DNA damage | 8 | 54.0× | 3e-10 |
| positive regulation of intrinsic apoptotic signaling pathway | 5 | 50.1× | 3e-06 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
61 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 46 |
| Likely benign | 5 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1226 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 22:17735590:CCCT:C | acceptor_loss | 1.0000 |
| 22:17738015:A:AC | donor_gain | 1.0000 |
| 22:17738016:C:CC | donor_gain | 1.0000 |
| 22:17738016:CATTT:C | donor_gain | 1.0000 |
| 22:17738227:GTCC:G | acceptor_loss | 1.0000 |
| 22:17738228:TCC:T | acceptor_loss | 1.0000 |
| 22:17738229:CCT:C | acceptor_loss | 1.0000 |
| 22:17738230:C:CA | acceptor_loss | 1.0000 |
| 22:17738231:T:G | acceptor_loss | 1.0000 |
| 22:17739346:CA:C | donor_loss | 1.0000 |
| 22:17739347:A:AC | donor_gain | 1.0000 |
| 22:17739347:ACCT:A | donor_gain | 1.0000 |
| 22:17739348:C:CC | donor_gain | 1.0000 |
| 22:17739348:CCT:C | donor_gain | 1.0000 |
| 22:17739348:CCTC:C | donor_gain | 1.0000 |
| 22:17739485:GAAT:G | acceptor_gain | 1.0000 |
| 22:17739488:TC:T | acceptor_loss | 1.0000 |
| 22:17739489:C:CC | acceptor_gain | 1.0000 |
| 22:17739496:C:CT | acceptor_gain | 1.0000 |
| 22:17739497:A:T | acceptor_gain | 1.0000 |
| 22:17739500:C:CT | acceptor_gain | 1.0000 |
| 22:17739501:A:T | acceptor_gain | 1.0000 |
| 22:17739506:C:CT | acceptor_gain | 1.0000 |
| 22:17739507:G:T | acceptor_gain | 1.0000 |
| 22:17734809:A:C | acceptor_gain | 0.9900 |
| 22:17735588:TCCC:T | acceptor_gain | 0.9900 |
| 22:17735589:CCC:C | acceptor_gain | 0.9900 |
| 22:17735589:CCCC:C | acceptor_gain | 0.9900 |
| 22:17735590:CC:C | acceptor_gain | 0.9900 |
| 22:17735590:CCC:C | acceptor_gain | 0.9900 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000025988 (22:17765441 T>A,C), RS1000051641 (22:17755792 T>C), RS1000105028 (22:17771021 T>C), RS1000108780 (22:17749653 TA>T), RS1000210491 (22:17738882 T>C), RS1000218164 (22:17744357 G>A), RS1000226247 (22:17747567 C>G), RS1000357876 (22:17754616 C>T), RS1000449662 (22:17744131 C>A), RS1000450741 (22:17752712 C>G), RS1000454177 (22:17769402 G>A), RS1000580281 (22:17763676 G>A), RS1000613175 (22:17753054 C>T), RS1000955679 (22:17738656 C>G,T), RS1000972825 (22:17769539 A>AGC)
Disease associations
OMIM: gene MIM:601997 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002875_64 | Diisocyanate-induced asthma | 1.000000e-06 |
| GCST010988_512 | Adult body size | 2.000000e-08 |
| GCST90002400_498 | Plateletcrit | 3.000000e-11 |
| GCST90002402_638 | Platelet count | 1.000000e-10 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0006995 | response to diisocyanate |
| EFO:0007985 | platelet crit |
| EFO:0004309 | platelet count |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (7): CHEMBL1250414 (SINGLE PROTEIN), CHEMBL3430886 (PROTEIN-PROTEIN INTERACTION), CHEMBL3883285 (PROTEIN-PROTEIN INTERACTION), CHEMBL5169265 (PROTEIN-PROTEIN INTERACTION), CHEMBL5169268 (PROTEIN-PROTEIN INTERACTION), CHEMBL5169271 (PROTEIN-PROTEIN INTERACTION), CHEMBL5169272 (PROTEIN-PROTEIN INTERACTION)
Molecules with ChEMBL bioactivity
4 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 50,454 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3137309 | VENETOCLAX | 4 | 9,389 |
| CHEMBL297453 | EPIGALOCATECHIN GALLATE | 3 | 22,804 |
| CHEMBL51483 | GOSSYPOL | 3 | 13,973 |
| CHEMBL376408 | ABT 737 | 1 | 4,288 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
154 potent at pChembl≥5 of 168 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
119 with measured affinity, of 184 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2R)-2-[5-[3-chloro-2-methyl-4-[2-(4-methylpiperazin-1-yl)ethoxy]phenyl]-6-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4-yl]oxy-3-[2-[[2-(2-methoxyphenyl)pyrimidin-4-yl]methoxy]phenyl]propanoic acid | 2066216: Inhibition of MCL-1 (unknown origin)/FAM-BID (unknown origin) interaction measured by fluorescence polarization assay | ki | 0.0001 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147947: Binding affinity to human BID incubated for 45 mins by Kinobead based pull down assay | kd | 0.0091 | uM |
| 3-methyl-5-propan-2-yl-2-(1,4,6,7-tetrahydroxy-3-methyl-5-propan-2-ylnaphthalen-2-yl)naphthalene-1,4,6,7-tetrone | 1858754: Inhibition of Mcl-1/Bid (unknown origin) by fluorescence polarization assay | ic50 | 0.0250 | uM |
| 4-[4-[[2-(4-chlorophenyl)phenyl]methyl]piperazin-1-yl]-N-[4-[[(2R)-4-(dimethylamino)-1-phenylsulfanylbutan-2-yl]amino]-3-nitrophenyl]sulfonylbenzamide | 515599: Inhibition of GST-tagged Bcl-xl/FITC-conjugated Bid interaction by fluorescence polarisation assay | ic50 | 0.0485 | uM |
| 3-oxo-7-thiomorpholin-4-ylphenalene-1,2-dicarbonitrile | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.0580 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-2-(1H-pyrrolo[2,3-b]pyridin-5-yloxy)benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1050 | uM |
| (2R,4aR,5S,8aR)-5-[(E)-2-(4-carboxyphenyl)prop-1-enyl]-7-methyl-2-[2-(4-pyridin-3-yloxybenzoyl)oxyethyl]-2,5,8,8a-tetrahydro-1H-naphthalene-4a-carboxylic acid | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.1060 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-[ethyl(prop-2-enoyl)amino]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1100 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-[prop-2-enoyl(propyl)amino]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1240 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-2-(1H-pyrrolo[2,3-b]pyridin-5-yloxy)benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1270 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-[propan-2-yl(prop-2-enoyl)amino]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1400 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-2-(1-methylpyrrolo[2,3-b]pyridin-5-yl)oxybenzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1450 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1580 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-2-phenylbenzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.1780 | uM |
| 2-hydroxy-6-[(Z)-tridec-8-enyl]benzoic acid | 1635029: Inhibition of His-tagged Mcl-1/5-carboxyfluorescein-Bid (unknown origin) after 1 hr by fluorescence polarization assay | ki | 0.2000 | uM |
| 2-hydroxy-6-tridecylbenzoic acid | 1635029: Inhibition of His-tagged Mcl-1/5-carboxyfluorescein-Bid (unknown origin) after 1 hr by fluorescence polarization assay | ki | 0.2000 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-[methyl(prop-2-enoyl)amino]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.2180 | uM |
| 4-[4-[[1-(4-chloro-2-methylphenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.2510 | uM |
| 4-[4-[[1-(2,4-dichlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.2560 | uM |
| ethyl (2Z,5R)-5-(3-acetylphenyl)-2-[(1-benzylindol-3-yl)methylidene]-3-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxylate | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.2900 | uM |
| methyl (2Z,5S)-5-(4-acetylphenyl)-2-[(1-benzylindol-3-yl)methylidene]-3-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxylate | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.3200 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-[[methyl(prop-2-enoyl)amino]methyl]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.3260 | uM |
| 1-[3,5-bis(trifluoromethyl)phenyl]-3-[2-[[3-[2-(3,4-dihydroxyphenoxy)phenyl]thiophen-2-yl]sulfonylamino]ethyl]urea | 1858827: Binding affinity to Mcl-1/Bid (unknown origin) by fluorescence polarization assay | ki | 0.3300 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-[[ethyl(prop-2-enoyl)amino]methyl]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.3350 | uM |
| (2Z,5R)-2-[(1-benzylindol-3-yl)methylidene]-3-oxo-N,5-diphenyl-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxamide | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.3600 | uM |
| [(2R,3R)-5,7-dihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-3-yl] 3,4,5-trihydroxybenzoate | 1858784: Inhibition of Bcl-B/Bid (unknown origin) | ic50 | 0.3600 | uM |
| 4-[4-[[1-(4-chloro-2-fluorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.3610 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-2-pyridin-4-ylbenzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.3700 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-[methyl(prop-2-enoyl)amino]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.3730 | uM |
| 3-chloro-1-(3,4-dichlorophenyl)-4-(4-methylpiperazin-1-yl)pyrrole-2,5-dione | 2066207: Inhibition of BFL-1 (unknown origin)/FITC-conjugated Bid BH3 peptide (unknown origin) interaction by fluorescence polarization assay | ic50 | 0.4000 | uM |
| 4-[4-[[1-(2-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.4090 | uM |
| methyl (2Z,5R)-5-(4-acetylphenyl)-2-[(1-benzylindol-3-yl)methylidene]-3-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxylate | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.4200 | uM |
| (NE)-4-methyl-N-[4-oxo-3-(1H-1,2,4-triazol-5-ylsulfanyl)naphthalen-1-ylidene]benzenesulfonamide | 1858838: Inhibition of Mcl-1/FITC-labelled Bid (unknown origin) protein protein interaction incubated for 20 to 60 mins by fluorescence polarisation binding assay | ic50 | 0.4500 | uM |
| 1-[4-[2-benzyl-6-(3-fluorophenyl)indazol-3-yl]piperazin-1-yl]prop-2-en-1-one | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.4650 | uM |
| 1-[4-[(3-chlorophenyl)methoxy]phenyl]sulfonylindole-2-carboxylic acid | 1858808: Binding affinity to Mcl-1/FAM-labelled Bid (unknown origin) incubated for 1 min by fluorescence polarization assay | ki | 0.4800 | uM |
| 2-[4-[(3-bromophenyl)sulfonylamino]-1-hydroxynaphthalen-2-yl]sulfanylacetic acid | 1858752: Binding affinity to Mcl-1/Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.4900 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.5250 | uM |
| 6,10-dichloro-5-(2-nitrophenyl)sulfanyl-1-azapentacyclo[10.6.1.03,7.08,19.013,17]nonadeca-8,10,12(19),14-tetraene-2-carboxylic acid | 1858827: Binding affinity to Mcl-1/Bid (unknown origin) by fluorescence polarization assay | ki | 0.5300 | uM |
| ethyl (2Z,5S)-5-(3-acetylphenyl)-2-[(1-benzylindol-3-yl)methylidene]-3-oxo-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxylate | 1858807: Binding affinity to Bcl-2 /Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.5900 | uM |
| 2-[[4-[(4-tert-butylphenyl)methyl]piperazin-1-yl]sulfonylamino]-5-(2-phenylethylsulfanyl)benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.6450 | uM |
| 2-hydroxy-6-undecylbenzoic acid | 1635029: Inhibition of His-tagged Mcl-1/5-carboxyfluorescein-Bid (unknown origin) after 1 hr by fluorescence polarization assay | ki | 0.7000 | uM |
| 4-[4-[[1-(3-methoxyphenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.7230 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-2-[3-(dimethylamino)propyl-methylamino]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.7740 | uM |
| 4-[4-[[1-phenyl-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.7810 | uM |
| (2Z,5S)-2-[(1-benzylindol-3-yl)methylidene]-3-oxo-N,5-diphenyl-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxamide | 1858807: Binding affinity to Bcl-2 /Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 0.8100 | uM |
| 4-[4-[[1-(4-chlorophenyl)-6-[(prop-2-enoylamino)methyl]-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.9130 | uM |
| 4-[4-[[1-(4-chloro-2-ethylphenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]-N-[3-nitro-4-(oxan-4-ylmethylamino)phenyl]sulfonyl-2-(1H-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.9490 | uM |
| 4-[4-[[1-(4-chloro-2-methoxyphenyl)-6-(prop-2-enoylamino)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.9590 | uM |
| 4-[4-[[6-[(2-chloroacetyl)amino]-1-(4-chlorophenyl)-3,4-dihydronaphthalen-2-yl]methyl]piperazin-1-yl]benzoic acid | 2066213: Inhibition of BFL-1 (unknown origin)/ fluorescein-tagged Bid BH3 peptide (79 to 99) (unknown origin) interaction measured after 24 hrs incubation by fluorescence polarization assay | ki | 0.9970 | uM |
| (2Z)-5-(4-fluorophenyl)-2-[[1-[(2-fluorophenyl)methyl]indol-3-yl]methylidene]-3-oxo-N-phenyl-5H-[1,3]thiazolo[3,2-a]pyrimidine-6-carboxamide | 1858805: Binding affinity to human N-terminal 8xHis tagged Mcl-1/5-FAM-tagged Bid (unknown origin) assessed as inhibition constant by fluorescence polarization assay | ki | 1.0500 | uM |
CTD chemical–gene interactions
312 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Arsenic Trioxide | affects cleavage, affects cotreatment, increases expression, decreases expression, increases cleavage (+3 more) | 20 |
| Cisplatin | decreases expression, decreases reaction, increases expression, affects expression, increases cleavage (+2 more) | 11 |
| Resveratrol | decreases expression, increases activity, increases localization, affects cotreatment, increases expression (+1 more) | 10 |
| Vorinostat | decreases reaction, increases cleavage, increases reaction, increases expression, affects cotreatment (+1 more) | 10 |
| Plant Extracts | decreases reaction, increases activity, increases cleavage, affects cotreatment, increases expression (+1 more) | 8 |
| Quercetin | affects cotreatment, increases cleavage, decreases expression, increases reaction, increases expression | 8 |
| Valproic Acid | increases cleavage, decreases expression, increases expression, affects expression, affects cotreatment | 8 |
| Bortezomib | affects cotreatment, decreases expression, increases cleavage, increases reaction, increases activity (+1 more) | 7 |
| Acetylcysteine | decreases expression, decreases abundance, decreases reaction, increases cleavage, affects cotreatment | 7 |
| Doxorubicin | increases localization, increases reaction, decreases reaction, increases activity, increases cleavage (+4 more) | 7 |
| alvocidib | increases cleavage, decreases expression, decreases reaction, increases activity, affects cotreatment | 5 |
| Genistein | affects binding, decreases expression, affects cotreatment, increases cleavage, increases activity (+1 more) | 5 |
| sodium arsenite | decreases expression, increases response to substance, affects cotreatment, increases abundance, increases expression | 4 |
| Fluorouracil | increases reaction, decreases reaction, increases response to substance, decreases response to substance, affects cotreatment (+3 more) | 4 |
| Paraquat | affects cotreatment, increases expression, decreases expression, increases cleavage | 4 |
| Particulate Matter | decreases reaction, increases expression, decreases expression | 4 |
| trichostatin A | increases expression, affects expression, affects localization, increases reaction | 3 |
| benzyloxycarbonyl-isoleucyl-glutamyl-threonyl-aspartic acid fluoromethyl ketone | decreases reaction, increases cleavage, increases activity | 3 |
| Celecoxib | increases cleavage, increases reaction, affects cotreatment | 3 |
| Arsenic | increases abundance, affects expression, increases expression, affects cotreatment | 3 |
| Benzo(a)pyrene | increases expression, decreases reaction, decreases expression | 3 |
| Cadmium | decreases reaction, increases cleavage, affects cotreatment, decreases expression, increases abundance (+1 more) | 3 |
| Copper | increases cleavage, decreases expression, affects binding, increases expression, affects cotreatment | 3 |
| Estradiol | affects cotreatment, decreases expression, decreases reaction, increases expression | 3 |
| Tretinoin | decreases expression, affects cotreatment, increases cleavage | 3 |
| Reactive Oxygen Species | decreases abundance, increases cleavage, increases abundance, increases expression, decreases reaction (+5 more) | 3 |
| Cadmium Chloride | decreases expression, affects cotreatment, increases abundance, increases expression | 3 |
| bisphenol A | decreases expression, decreases methylation, increases expression | 2 |
| lonidamine | affects cotreatment, increases activity, increases cleavage | 2 |
| sulforaphane | affects cotreatment, increases cleavage, increases expression | 2 |
ChEMBL screening assays
44 unique, capped per target: 44 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4477674 | Binding | Binding affinity to Bid (unknown origin) assessed as micelles formation at 0.25 to 5 equivalent by 1H NMR spectra analysis | Anacardic Acids from Knema hookeriana as Modulators of Bcl-xL/Bak and Mcl-1/Bid Interactions. — J Nat Prod |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_E1GH | Abcam SW480 BID KO | Cancer cell line | Male |
| CVCL_KT40 | HeLa SilenciX BID | Cancer cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): asthma