BIRC5

gene
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Also known as EPR-1survivin

Summary

BIRC5 (baculoviral IAP repeat containing 5, HGNC:593) is a protein-coding gene on chromosome 17q25.3, encoding Baculoviral IAP repeat-containing protein 5 (O15392). Multitasking protein that has dual roles in promoting cell proliferation and preventing apoptosis. In precision oncology, BIRC5 NUCLEAR EXPRESSION confers sensitivity to Platinum Compound + Taxane Compound in Lung Non-small Cell Carcinoma (CIViC Level B); 1 further curated variant–drug associations are listed below. It is a common-essential gene (DepMap: required in 99.7% of cancer cell lines).

This gene is a member of the inhibitor of apoptosis (IAP) gene family, which encode negative regulatory proteins that prevent apoptotic cell death. IAP family members usually contain multiple baculovirus IAP repeat (BIR) domains, but this gene encodes proteins with only a single BIR domain. The encoded proteins also lack a C-terminus RING finger domain. Gene expression is high during fetal development and in most tumors, yet low in adult tissues. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.

Source: NCBI Gene 332 — RefSeq curated summary.

At a glance

  • GWAS associations: 2
  • Clinical variants (ClinVar): 30 total — 1 likely-pathogenic
  • Druggable target: yes — 2 molecules with ChEMBL bioactivity
  • Precision-oncology evidence (CIViC): 2 curated variant–drug associations
  • Cancer dependency (DepMap): dependent in 99.7% of screened cell lines (common-essential)
  • MANE Select transcript: NM_001168

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:593
Approved symbolBIRC5
Namebaculoviral IAP repeat containing 5
Location17q25.3
Locus typegene with protein product
StatusApproved
AliasesEPR-1, survivin
Ensembl geneENSG00000089685
Ensembl biotypeprotein_coding
OMIM603352
Entrez332

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 7 protein_coding, 3 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined, 1 retained_intron

ENST00000301633, ENST00000350051, ENST00000374948, ENST00000586192, ENST00000587746, ENST00000589892, ENST00000590449, ENST00000590925, ENST00000591800, ENST00000592115, ENST00000592734, ENST00000917427

RefSeq mRNA: 3 — MANE Select: NM_001168 NM_001012270, NM_001012271, NM_001168

CCDS: CCDS11755, CCDS32751, CCDS32752

Canonical transcript exons

ENST00000350051 — 4 exons

ExonStartEnd
ENSE000013058797821425378214427
ENSE000034985927821468078214789
ENSE000036728517821666478216781
ENSE000038489747822346578225635

Expression profiles

Bgee: expression breadth ubiquitous, 194 present calls, max score 96.49.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 64.6074 / max 515.8674, expressed in 1538 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter IDTPM avgSamples expressed
16304355.16361519
1630449.44381270

Top tissues by expression

289 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
ventricular zoneUBERON:000305396.49gold quality
ganglionic eminenceUBERON:000402393.54gold quality
embryoUBERON:000092293.47gold quality
primordial germ cell in gonadCL:0000670 ∩ UBERON:000099189.95gold quality
left testisUBERON:000453387.59gold quality
right testisUBERON:000453487.19gold quality
testisUBERON:000047386.71gold quality
mucosa of transverse colonUBERON:000499186.30gold quality
bone marrowUBERON:000237186.28gold quality
trabecular bone tissueUBERON:000248385.60gold quality
stromal cell of endometriumCL:000225584.99gold quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047384.63gold quality
bone elementUBERON:000147484.52gold quality
bone marrow cellCL:000209282.45gold quality
thymusUBERON:000237082.41gold quality
tongue squamous epitheliumUBERON:000691981.91silver quality
esophagus mucosaUBERON:000246981.59gold quality
lower esophagus mucosaUBERON:003583480.67gold quality
secondary oocyteCL:000065580.18gold quality
vermiform appendixUBERON:000115479.57gold quality
rectumUBERON:000105278.63gold quality
ileal mucosaUBERON:000033178.19gold quality
esophagus squamous epitheliumUBERON:000692076.58gold quality
epithelium of esophagusUBERON:000197676.31gold quality
caecumUBERON:000115376.16gold quality
lymph nodeUBERON:000002975.65gold quality
adrenal tissueUBERON:001830374.90gold quality
squamous epitheliumUBERON:000691474.68gold quality
oral cavityUBERON:000016774.34gold quality
gingival epitheliumUBERON:000194973.31silver quality

Single-cell (SCXA)

Detected in 27 experiment(s), a significant marker in 22.

ExperimentMarker?Max mean expression
E-MTAB-7051yes4309.11
E-GEOD-75140yes1210.20
E-MTAB-9435yes1004.08
E-GEOD-110499yes761.70
E-MTAB-10662yes759.52
E-ENAD-20yes675.25
E-MTAB-7249yes645.33
E-MTAB-7052yes374.16
E-MTAB-8530yes328.08
E-MTAB-9067yes298.22
E-MTAB-6678yes155.99
E-HCAD-1yes41.47
E-CURD-112yes39.35
E-HCAD-10yes39.04
E-HCAD-13yes25.28

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): APC, BHLHE40, CTNNB1, CTNNBL1, DNMT1, E2F1, E2F2, E2F3, E2F4, EGR1, EHMT2, EP300, ESR1, ESR2, FHIT, FOXC1, FOXM1, FOXO1, FOXO3, GATA1, GATA3, GFI1, GTF3A, HDAC1, HIF1A, HLF, ILF3, IRF1, KLF4, KLF5, LEF1, MYBL2, MYC, MYCN, NFKB1, NFKB, NONO, NR4A1, PARP1, PAX1

miRNA regulators (miRDB)

52 targeting BIRC5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-3613-3P100.0076.367965
HSA-MIR-4283100.0066.422097
HSA-MIR-548AA99.9670.643753
HSA-MIR-548AP-3P99.9670.643753
HSA-MIR-548T-3P99.9670.643753
HSA-MIR-218-5P99.9372.222103
HSA-MIR-3529-3P99.9073.553045
HSA-MIR-548D-3P99.8770.674362
HSA-MIR-548BB-3P99.8670.584354
HSA-MIR-548AC99.8470.774351
HSA-MIR-548H-3P99.8470.804349
HSA-MIR-548Z99.8470.804349
HSA-MIR-4713-5P99.7867.801794
HSA-MIR-4766-5P99.7569.232662
HSA-MIR-7856-5P99.7569.992901
HSA-MIR-494-3P99.7071.452795
HSA-MIR-64699.6867.841645
HSA-MIR-5003-5P99.6169.131624
HSA-MIR-497-3P99.6169.711990
HSA-MIR-888-3P99.5369.771057
HSA-MIR-360999.5269.892587
HSA-MIR-548AH-5P99.5269.732626
HSA-MIR-432599.4972.201342
HSA-MIR-4735-5P99.4368.491780
HSA-MIR-4722-3P99.3565.221099
HSA-MIR-542-3P99.3467.581270
HSA-MIR-504-3P99.3067.181745
HSA-MIR-3688-5P99.1269.671091
HSA-MIR-29B-1-5P98.8668.351364
HSA-MIR-6873-5P98.4566.141417

Functional genomics

DepMap (CRISPR cell-line fitness): dependent in 99.7% of screened cell lines, common-essential.

Literature-anchored findings (GeneRIF, showing 40)

  • Relative levels of expression of survivin mRNA and survivin protein increased after low- and high-dose CDDP treatment. Survivin mRNA was not detected in normal gastric mucosas. (PMID:11712083)
  • data demonstrate a crucial role of PI3-kinase/Akt/NF-kappaB/survivin signaling in tubular morphogenesis of HCAEC triggered by hypoxic preconditioning. (PMID:11728454)
  • Expression of survivin mRNA and protein in gastric cancer cell line (MKN-45) during cisplatin treatment (PMID:11773702)
  • Survivin was expressed in all thymocyte subsets but its expression level was developmentally regulated. (PMID:11821157)
  • expression associated with reduced survival and reduced apoptotic capacity in gliomas (PMID:11844831)
  • Data demonstrate that the primary survivin pool in mitotic cells is associated with microtubules and participates in the assembly of a bipolar mitotic spindle. (PMID:11861764)
  • expression of alternative survivin splice varients related to gastric tumor progression (PMID:11875736)
  • The ratio of survivin to Fas in primary tumors may be used to predict the risk for recurrent disease in patients with neuroblastoma. (PMID:11877677)
  • survivin may represent a novel neuroendocrine marker for chromaffin cell tumors, survivin does not appear to reliably distinguish benign from malignant pheochromocytomas/paragangliomas and thus does not identify patients at risk of recurrent disease (PMID:11888845)
  • This nuclear shuttling protein is exported actively from the nucleus via the CRM1-dependent pathway. (PMID:11925104)
  • Expression in primary glioblastomas. (PMID:12073047)
  • survivin expression freqently seen in gastric cancer patients and first-degree relatives; co-expression with cyclooxygenase-2 suggests multiple pathways contributing to apoptosis inhibition in gastric cancer (PMID:12085263)
  • expression of functionally different survivin splice variants suggests a role in the progression and clinical behavior of human renal cell carcinomas (PMID:12115583)
  • Survivin expression was significantly associated with PCNA-labeling index, clinical stage, histological grade, clinical outcome, and survival rate in ovarian epithelial carcinomas. (PMID:12119561)
  • Higher expression level of surviving mRNA in primary leukemic cells from acute leukemia patients may be one of the reasons that leukemic cells are insensitive to chemotherapy. (PMID:12133447)
  • Survivin was not likely to be related with an inhibition of apoptosis or induction of telomerase but may have some role in gastric cancer extension. (PMID:12143224)
  • comparative study of expression of survivin in primary and metastatic colonic adenocarcinomas (PMID:12168867)
  • expression in laryngeal squamous cell carcinomas and its prognostic implications (PMID:12174930)
  • studies define a novel p53-survivin signaling pathway activated by DNA damage that results in down-regulation of survivin, cell cycle arrest, and apoptosis (PMID:12235242)
  • cellular studies and clinical data suggest a direct link between survivin expression and tumour cell susceptibility to taxol (PMID:12363043)
  • survivin not only suppresses apoptosis but also accelerates cancer cell-proliferative activity and plays an important role in tumor progression in hepatocellular carcinoma (PMID:12374680)
  • Reovirus-induced apoptosis involves reduction of cellular survivin levels (PMID:12388702)
  • findings suggest that activated STAT3 signaling directly contributes to malignant progression of primary effusion lymphoma by preventing apoptosis, acting through the prosurvival protein survivin (PMID:12393476)
  • These results indicate that survivin stimulates Aurora-B kinase activity and helps correctly target Aurora-B to its substrates during the cell cycle, thus providing a mechanism as to how survivin exerts its function in human cells. (PMID:12419797)
  • Survivin may be actively involved in regulating cell viability during HIV-1 infection (PMID:12510154)
  • Suppression of phosphorylation on Thr34 by flavopiridol enhances tumor cell apoptosis. (PMID:12517802)
  • the determination of nuclear survivin expression could be used to individualise therapeutic strategies in oesophageal squamous cell cancer in the future. (PMID:12556969)
  • Survivin expression in astrocytic tumors varies with histologic malignancy and may play an important role in the oncogenesis and progression of astrocytic tumors (PMID:12569609)
  • The level of survivin was decreased after thapsigargin treatment in hepatoma cell lines indicating that survivin plays an important role in endoplasmic reticulum stress-mediated apoptosis. (PMID:12609713)
  • We conclude that the changes in the level of caspase-3 and survivin play an important role in the transformation from normal gastric mucosa to gastric cancer. (PMID:12643601)
  • Survivin is an important inhibitor of apoptosis in colorectal cancer cell lines. (PMID:12654446)
  • role in pathological conditions-REVIEW (PMID:12678716)
  • Survivin is expressed in embryonic tissues as well as in the majority of human cancers, but is not expressed in most normal adult tissues. (PMID:12709681)
  • Survivin-HBXIP complexes, but neither survivin nor HBXIP individually, bind pro-caspase-9, preventing its recruitment to Apaf1, and thereby selectively suppressing apoptosis. (PMID:12773388)
  • survivin may play an important role in transition from intraductal papillary-mucinous tumor of the pancreas adenoma to carcinoma in situ (PMID:12794243)
  • Data show that mammalian cells lacking survivin are unable to align their chromosomes, fail to recruit Aurora B to kinetochores and become polyploid at a very high frequency. (PMID:12805209)
  • survivin is upregulated by oncogenic c-H-Ras in tumor cells (PMID:12833149)
  • survivin plays an important role in the onset of gastric carcinoma and that high survivin expression is an early event of gastric carcinoma. (PMID:12854136)
  • survivin has a role in the dedifferentiation of thyroid carcinoma (PMID:12883703)
  • Expression of non-destructible beta catenin mutants increased survivin expression and protected against ultraviolet-B-induced apoptosis. (PMID:12885482)

Cross-species orthologs

5 orthologs

OrganismSymbolGene ID
danio_reriobirc5aENSDARG00000075621
mus_musculusBirc5ENSMUSG00000017716
rattus_norvegicusBirc5ENSRNOG00000050819
drosophila_melanogasterDiap2FBGN0015247
caenorhabditis_elegansWBGENE00000250

Paralogs (7): BIRC3 (ENSG00000023445), NLRC4 (ENSG00000091106), BIRC7 (ENSG00000101197), XIAP (ENSG00000101966), BIRC2 (ENSG00000110330), BIRC6 (ENSG00000115760), NAIP (ENSG00000249437)

Protein

Protein identifiers

Baculoviral IAP repeat-containing protein 5O15392 (reviewed: O15392)

Alternative names: Apoptosis inhibitor 4, Apoptosis inhibitor survivin

All UniProt accessions (6): O15392, A0A0B4J1S3, H3BLT4, K7ELG2, K7EMW2, K7EP76

UniProt curated annotations — full annotation on UniProt →

Function. Multitasking protein that has dual roles in promoting cell proliferation and preventing apoptosis. Component of a chromosome passage protein complex (CPC) which is essential for chromosome alignment and segregation during mitosis and cytokinesis. Acts as an important regulator of the localization of this complex; directs CPC movement to different locations from the inner centromere during prometaphase to midbody during cytokinesis and participates in the organization of the center spindle by associating with polymerized microtubules. Involved in the recruitment of CPC to centromeres during early mitosis via association with histone H3 phosphorylated at ‘Thr-3’ (H3pT3) during mitosis. The complex with RAN plays a role in mitotic spindle formation by serving as a physical scaffold to help deliver the RAN effector molecule TPX2 to microtubules. May counteract a default induction of apoptosis in G2/M phase. The acetylated form represses STAT3 transactivation of target gene promoters. May play a role in neoplasia. Inhibitor of CASP3 and CASP7. Essential for the maintenance of mitochondrial integrity and function. Isoform 2 and isoform 3 do not appear to play vital roles in mitosis. Isoform 3 shows a marked reduction in its anti-apoptotic effects when compared with the displayed wild-type isoform.

Subunit / interactions. Monomer or homodimer. Exists as a homodimer in the apo state and as a monomer in the CPC-bound state. The monomer protects cells against apoptosis more efficiently than the dimer. Only the dimeric form is capable of enhancing tubulin stability in cells. When phosphorylated, interacts with LAMTOR5/HBXIP; the resulting complex binds pro-CASP9, as well as active CASP9, but much less efficiently. Component of the chromosomal passenger complex (CPC) composed of at least BIRC5/survivin, CDCA8/borealin, INCENP, AURKB or AURKC; in the complex forms a triple-helix bundle-based subcomplex with INCENP and CDCA8. Interacts with JTB. Interacts (via BIR domain) with histone H3 phosphorylated at ‘Thr-3’ (H3pT3). Interacts with EVI5. Interacts with GTP-bound RAN in both the S and M phases of the cell cycle. Interacts with USP9X. Interacts with tubulin. Interacts with BIRC2/c-IAP1. The acetylated form at Lys-129 interacts with STAT3. The monomeric form deacetylated at Lys-129 interacts with XPO1/CRM1. The monomeric form interacts with XIAP/BIRC4. Both the dimeric and monomeric form can interact with DIABLO/SMAC. Interacts with BIRC6/bruce. Interacts with FBXL7; this interaction facilitates the polyubiquitination and subsequent proteasomal degradation of BIRC5 by the SCF(FBXL7) E3 ubiquitin-protein ligase complex. (Microbial infection) Interacts with Epstein-Barr virus (EBV) EBNA1; this interaction is probably important for EBV episome maintenance in Burkitt’s lymphoma cells.

Subcellular location. Cytoplasm. Nucleus. Chromosome. Centromere. Cytoskeleton. Spindle. Kinetochore. Midbody.

Tissue specificity. Expressed only in fetal kidney and liver, and to lesser extent, lung and brain. Abundantly expressed in adenocarcinoma (lung, pancreas, colon, breast, and prostate) and in high-grade lymphomas. Also expressed in various renal cell carcinoma cell lines. Expressed in cochlea including the organ of Corti, the lateral wall, the interdental cells of the Limbus as well as in Schwann cells and cells of the cochlear nerve and the spiral ganglions (at protein level). Not expressed in cells of the inner and outer sulcus or the Reissner’s membrane (at protein level).

Post-translational modifications. Ubiquitinated by the Cul9-RING ubiquitin-protein ligase complex, leading to its degradation. Ubiquitination is required for centrosomal targeting. Deubiquitinated by USP35 or USP38; leading to stabilization. In vitro phosphorylation at Thr-117 by AURKB prevents interaction with INCENP and localization to mitotic chromosomes. Phosphorylation at Thr-48 by CK2 is critical for its mitotic and anti-apoptotic activities. Phosphorylation at Thr-34 by CDK15 is critical for its anti-apoptotic activity. Phosphorylation at Ser-20 by AURKC is critical for regulation of proper chromosome alignment and segregation, and possibly cytokinesis. Acetylation at Lys-129 by CBP results in its homodimerization, while deacetylation promotes the formation of monomers which heterodimerize with XPO1/CRM1 which facilitates its nuclear export. The acetylated form represses STAT3 transactivation. The dynamic equilibrium between its acetylation and deacetylation at Lys-129 determines its interaction with XPO1/CRM1, its subsequent subcellular localization, and its ability to inhibit STAT3 transactivation.

Domain organisation. The BIR repeat is necessary and sufficient for LAMTOR5 binding.

Induction. Up-regulated by COMP.

Similarity. Belongs to the IAP family.

Isoforms (7)

UniProt IDNamesCanonical?
O15392-11, Alphayes
O15392-22, 2B, Beta
O15392-33, DeltaEx3
O15392-44, 3B
O15392-55, SI
O15392-66, 3 alpha
O15392-77, 2 alpha

RefSeq proteins (3): NP_001012270, NP_001012271, NP_001159* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR001370BIR_rptRepeat
IPR051190Baculoviral_IAPFamily

Pfam: PF00653

UniProt features (65 total): mutagenesis site 22, modified residue 11, helix 7, splice variant 6, strand 5, binding site 4, sequence conflict 3, turn 3, chain 1, repeat 1, sequence variant 1, site 1

Structure

Experimental structures (PDB)

36 structures, top 30 by resolution.

PDBMethodResolution (Å)
2QFAX-RAY DIFFRACTION1.4
9TPIX-RAY DIFFRACTION1.8
6YIFX-RAY DIFFRACTION1.81
9TPHX-RAY DIFFRACTION2
3UECX-RAY DIFFRACTION2.18
2RAWX-RAY DIFFRACTION2.4
3UIGX-RAY DIFFRACTION2.4
3UIHX-RAY DIFFRACTION2.4
8RUPELECTRON MICROSCOPY2.42
3UEFX-RAY DIFFRACTION2.45
7LBOX-RAY DIFFRACTION2.5
6YIHX-RAY DIFFRACTION2.55
1F3HX-RAY DIFFRACTION2.58
3UEHX-RAY DIFFRACTION2.6
3UIIX-RAY DIFFRACTION2.6
7LBPX-RAY DIFFRACTION2.6
4A0IX-RAY DIFFRACTION2.6
3UEEX-RAY DIFFRACTION2.61
7LBQX-RAY DIFFRACTION2.69
3UEDX-RAY DIFFRACTION2.7
3UEIX-RAY DIFFRACTION2.7
7LBKX-RAY DIFFRACTION2.7
3UIKX-RAY DIFFRACTION2.7
3UIJX-RAY DIFFRACTION2.71
1E31X-RAY DIFFRACTION2.71
4A0NX-RAY DIFFRACTION2.74
3UEGX-RAY DIFFRACTION2.8
4A0JX-RAY DIFFRACTION2.8
9SI3ELECTRON MICROSCOPY2.83
9SJ5ELECTRON MICROSCOPY2.85

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-O15392-F195.070.91

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (1): 126 (interaction with fbxl7)

Ligand- & substrate-binding residues (4): 57; 60; 77; 84

Post-translational modifications (11): 48, 90, 110, 112, 115, 117, 121, 129, 20, 23, 34

Mutagenesis-validated functional residues (22):

PositionPhenotype
18disrupts interaction with histone h3pt3, no effect on interaction with incenp.
23increases ubiquitination and blocks dissociation from centromeres; when associated with r-62; r-78 and r-79.
25disrupts interaction with histone h3pt3, no effect on interaction with incenp.
33disrupts interaction with histone h3pt3, no effect on interaction with incenp.
34loss of lamtor5 binding.
34higher affinity for lamtor5 binding.
48localizes normally during mitosis but cannot support cell proliferation. increased affinity for cdca8/borealin.
57disrupts interaction with histone h3pt3, no effect on interaction with incenp.
62increases ubiquitination and blocks dissociation from centromeres; when associated with r-23; r-78 and r-79.
65almost abolishes ran-binding. does not disrupt binding to aurkb or cdca8. disrupts mitotic spindle assembly. does not di
67disrupts interaction with histone h3pt3, no effect on interaction with incenp.
70no change. loss of interaction with aurkb; when associated with a-71.
71no change. loss of interaction with aurkb; when associated with a-70.
78increases ubiquitination and blocks dissociation from centromeres; when associated with r-23; r-62 and r-79.
79increases ubiquitination and blocks dissociation from centromeres; when associated with r-23; r-62 and r-78.
84loss of cytoprotection.
90–91loss of fbxl7 mediated polyubiquitination.
117prevents phosphorylation by aurkb. still able to localize correctly but prevents interaction with incenp.
117mimics phosphorylation. disrupts subcellular localization during mitosis and prevents interaction with incenp.
126loss of fbxl7 binding.
129mimics acetylation. localization primarily within the nucleus.
129loss of acetylation. localization primarily within the cytoplasm.

Function

Pathways and Gene Ontology

Reactome pathways

34 pathways

IDPathway
R-HSA-141444Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
R-HSA-2467813Separation of Sister Chromatids
R-HSA-2500257Resolution of Sister Chromatid Cohesion
R-HSA-4615885SUMOylation of DNA replication proteins
R-HSA-5663220RHO GTPases Activate Formins
R-HSA-6785807Interleukin-4 and Interleukin-13 signaling
R-HSA-6803205TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain
R-HSA-68877Mitotic Prometaphase
R-HSA-8951664Neddylation
R-HSA-9648025EML4 and NUDC in mitotic spindle formation
R-HSA-1280215Cytokine Signaling in Immune system
R-HSA-141424Amplification of signal from the kinetochores
R-HSA-162582Signal Transduction
R-HSA-1640170Cell Cycle
R-HSA-168256Immune System
R-HSA-194315Signaling by Rho GTPases
R-HSA-195258RHO GTPase Effectors
R-HSA-212436Generic Transcription Pathway
R-HSA-2555396Mitotic Metaphase and Anaphase
R-HSA-2990846SUMOylation
R-HSA-3108232SUMO E3 ligases SUMOylate target proteins
R-HSA-3700989Transcriptional Regulation by TP53
R-HSA-392499Metabolism of proteins
R-HSA-449147Signaling by Interleukins
R-HSA-5633008TP53 Regulates Transcription of Cell Death Genes
R-HSA-597592Post-translational protein modification
R-HSA-68882Mitotic Anaphase
R-HSA-68886M Phase
R-HSA-69278Cell Cycle, Mitotic
R-HSA-69618Mitotic Spindle Checkpoint

MSigDB gene sets: 548 (showing top): GNF2_CKS1B, GOBP_MITOTIC_CYTOKINESIS, GOBP_CHROMOSOME_ORGANIZATION, GOBP_ATTACHMENT_OF_SPINDLE_MICROTUBULES_TO_KINETOCHORE, GOBP_REGULATION_OF_CELL_CYCLE_CHECKPOINT, HORIUCHI_WTAP_TARGETS_DN, BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN, KANG_DOXORUBICIN_RESISTANCE_UP, GNF2_CENPF, SEMBA_FHIT_TARGETS_DN, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_REGULATION_OF_NUCLEAR_DIVISION, GOBP_SENSORY_PERCEPTION_OF_MECHANICAL_STIMULUS, GOBP_CHROMOSOME_LOCALIZATION, GOBP_CELL_CYCLE_PHASE_TRANSITION

GO Biological Process (29): G2/M transition of mitotic cell cycle (GO:0000086), mitotic cell cycle (GO:0000278), mitotic cytokinesis (GO:0000281), apoptotic process (GO:0006915), mitotic spindle organization (GO:0007052), chromosome segregation (GO:0007059), mitotic spindle assembly checkpoint signaling (GO:0007094), sensory perception of sound (GO:0007605), positive regulation of cell population proliferation (GO:0008284), protein-containing complex localization (GO:0031503), positive regulation of exit from mitosis (GO:0031536), negative regulation of apoptotic process (GO:0043066), negative regulation of DNA-templated transcription (GO:0045892), positive regulation of mitotic cell cycle (GO:0045931), chromosome localization (GO:0050000), mitotic spindle midzone assembly (GO:0051256), cell division (GO:0051301), positive regulation of mitotic cell cycle spindle assembly checkpoint (GO:0090267), mitotic spindle assembly (GO:0090307), positive regulation of mitotic sister chromatid separation (GO:1901970), positive regulation of attachment of mitotic spindle microtubules to kinetochore (GO:1902425), positive regulation of mitotic cytokinesis (GO:1903490), microtubule cytoskeleton organization (GO:0000226), meiosis I (GO:0007127), regulation of mitotic cell cycle (GO:0007346), regulation of apoptotic process (GO:0042981), negative regulation of neuron apoptotic process (GO:0043524), regulation of insulin secretion involved in cellular response to glucose stimulus (GO:0061178), regulation of type B pancreatic cell proliferation (GO:0061469)

GO Molecular Function (15): cysteine-type endopeptidase inhibitor activity (GO:0004869), microtubule binding (GO:0008017), zinc ion binding (GO:0008270), tubulin binding (GO:0015631), enzyme binding (GO:0019899), small GTPase binding (GO:0031267), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), cysteine-type endopeptidase inhibitor activity involved in apoptotic process (GO:0043027), metal ion binding (GO:0046872), protein heterodimerization activity (GO:0046982), cobalt ion binding (GO:0050897), protein-folding chaperone binding (GO:0051087), protein binding (GO:0005515), peptidase inhibitor activity (GO:0030414)

GO Cellular Component (21): nuclear chromosome (GO:0000228), chromosome, centromeric region (GO:0000775), kinetochore (GO:0000776), nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), centriole (GO:0005814), cytosol (GO:0005829), microtubule (GO:0005874), spindle microtubule (GO:0005876), cytoplasmic microtubule (GO:0005881), microtubule cytoskeleton (GO:0015630), midbody (GO:0030496), interphase microtubule organizing center (GO:0031021), chromosome passenger complex (GO:0032133), protein-containing complex (GO:0032991), spindle midzone (GO:0051233), survivin complex (GO:1990713), chromosome (GO:0005694), spindle (GO:0005819), cytoskeleton (GO:0005856)

Reactome top-level categories

Rollup of top-14 pathways:

CategoryPathways
Mitotic Prometaphase2
M Phase2
Post-translational protein modification2
Amplification of signal from the kinetochores1
Mitotic Anaphase1
SUMO E3 ligases SUMOylate target proteins1
RHO GTPase Effectors1
Signaling by Interleukins1
TP53 Regulates Transcription of Cell Death Genes1
Immune System1
Mitotic Spindle Checkpoint1
Signaling by Rho GTPases, Miro GTPases and RHOBTB31
Signaling by Rho GTPases1
RNA Polymerase II Transcription1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
mitotic cell cycle5
cellular anatomical structure5
intracellular membraneless organelle4
mitotic nuclear division3
protein binding3
mitotic cell cycle process2
transition metal ion binding2
protein dimerization activity2
nuclear lumen2
microtubule organizing center2
cytoplasm2
microtubule cytoskeleton2
spindle2
microtubule2
mitotic cell cycle phase transition1
cell cycle G2/M phase transition1
cell cycle1
cytoskeleton-dependent cytokinesis1
programmed cell death1
apoptotic signaling pathway1
execution phase of apoptosis1
spindle organization1
microtubule cytoskeleton organization involved in mitosis1
cell cycle process1
negative regulation of mitotic metaphase/anaphase transition1
spindle assembly checkpoint signaling1
mitotic spindle checkpoint signaling1
sensory perception of mechanical stimulus1
cell population proliferation1
regulation of cell population proliferation1
positive regulation of cellular process1
macromolecule localization1
regulation of exit from mitosis1
exit from mitosis1
positive regulation of mitotic cell cycle phase transition1
apoptotic process1
regulation of apoptotic process1
negative regulation of programmed cell death1
DNA-templated transcription1
regulation of DNA-templated transcription1

Protein interactions and networks

STRING

3746 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
BIRC5CDCA8Q53HL2997
BIRC5AURKBQ96GD4997
BIRC5INCENPQ9NQS7995
BIRC5CCNB2O95067892
BIRC5CDK1P06493890
BIRC5CCNB1P14635885
BIRC5AURKAO14965866
BIRC5BUB1O43683866
BIRC5XIAPP98170855
BIRC5CENPEQ02224834
BIRC5BUB1BO60566834
BIRC5TOP2AP11388829
BIRC5CENPFP49454826
BIRC5BIRC7Q96CA5821
BIRC5UBE2CO00762820

IntAct

171 interactions, top by confidence:

ABTypeScore
BIRC5CDCA8psi-mi:“MI:0407”(direct interaction)0.960
CDCA8BIRC5psi-mi:“MI:0914”(association)0.960
CDCA8BIRC5psi-mi:“MI:0915”(physical association)0.960
CDCA8BIRC5psi-mi:“MI:0407”(direct interaction)0.960
BIRC5CDCA8psi-mi:“MI:0915”(physical association)0.960
BIRC5CDCA8psi-mi:“MI:0403”(colocalization)0.960
BIRC5CDCA8psi-mi:“MI:2364”(proximity)0.960
AURKBBIRC5psi-mi:“MI:0914”(association)0.950
BIRC5AURKBpsi-mi:“MI:0915”(physical association)0.950
AURKBBIRC5psi-mi:“MI:0915”(physical association)0.950
BIRC5AURKBpsi-mi:“MI:0217”(phosphorylation reaction)0.950
AURKBBIRC5psi-mi:“MI:2364”(proximity)0.950
AURKBBIRC5psi-mi:“MI:0407”(direct interaction)0.950
INCENPBIRC5psi-mi:“MI:0914”(association)0.920

BioGRID (305): AIP (Affinity Capture-Western), BIRC5 (Affinity Capture-Western), BIRC5 (Affinity Capture-MS), BIRC5 (Reconstituted Complex), DIABLO (Reconstituted Complex), DIABLO (FRET), BIRC5 (Affinity Capture-Western), BIRC5 (Reconstituted Complex), BIRC5 (Reconstituted Complex), BIRC5 (Reconstituted Complex), RAN (Co-localization), RAN (Affinity Capture-Western), BIRC5 (Proximity Label-MS), CASP9 (Co-localization), BIRC5 (Affinity Capture-Western)

ESM2 similar proteins: A1A5G2, B3DLA6, E1BGQ2, E3SCZ8, O15392, O70201, O88597, O95453, P23727, P26450, P27986, P42694, P61798, P69341, Q13572, Q14457, Q4A1L4, Q4A1L5, Q5F407, Q5F480, Q5M939, Q5R685, Q5R878, Q5RAH9, Q5RC51, Q5ZIA0, Q5ZKS6, Q63787, Q6DC64, Q6DDJ3, Q6DFV5, Q6DJB3, Q6GP52, Q6GR37, Q6I6F4, Q6J1J1, Q6NRC7, Q6NYU2, Q7T0P6, Q80YV4

Diamond homologs: A1E2V0, A1L020, A1L3F4, A5D8Q0, A9JTP3, A9ULZ2, D3ZDI6, E3SCZ8, O08863, O10296, O10324, O14064, O15392, O62640, O70201, O88738, P40629, P41435, P41436, P41437, P41454, P47732, P98170, Q05AK5, Q0WPJ7, Q13489, Q13490, Q28ER3, Q28H51, Q50L39, Q557E7, Q5BKL8, Q5R881, Q5RAH9, Q60989, Q62210, Q69Z36, Q6I6F4, Q6J1J1, Q6NTT6

SIGNOR signaling

21 interactions.

AEffectBMechanism
TP53down-regulatesBIRC5binding
CDK1up-regulatesBIRC5phosphorylation
TP53“down-regulates quantity by repression”BIRC5“transcriptional regulation”
BIRC5up-regulatesXIAPbinding
AURKBdown-regulatesBIRC5phosphorylation
BIRC5down-regulatesDIABLObinding
DIABLOdown-regulatesBIRC5binding
FHIT“down-regulates quantity by repression”BIRC5“transcriptional regulation”
PLK1up-regulatesBIRC5phosphorylation
STAT3“up-regulates quantity by expression”BIRC5“transcriptional regulation”
“sepantronium bromide”“down-regulates activity”BIRC5“chemical inhibition”
BIRC5“form complex”CPCbinding
CUL9“down-regulates quantity”BIRC5ubiquitination
BIRC5down-regulatesCASP3binding
BIRC5down-regulatesCASP9binding
FBXL7“down-regulates quantity by destabilization”BIRC5binding
“Cullin 1-RBX1-Skp1”“down-regulates quantity by destabilization”BIRC5polyubiquitination
E2F4“down-regulates quantity by repression”BIRC5“transcriptional regulation”

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 45 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal517.7×4e-04
Resolution of Sister Chromatid Cohesion615.7×2e-04
EML4 and NUDC in mitotic spindle formation514.1×9e-04
Mitotic Prometaphase612.6×4e-04
RHO GTPases Activate Formins511.8×2e-03
Separation of Sister Chromatids59.2×4e-03
Cell Cycle, Mitotic57.3×8e-03

GO biological processes:

GO termPartnersFoldFDR
mitotic cell cycle721.8×6e-06
negative regulation of gene expression58.0×8e-03
cell division77.5×2e-03
negative regulation of apoptotic process75.7×5e-03

Disease & clinical

Cancer significance

Clinical variants and AI predictions

ClinVar

30 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic1
Uncertain significance19
Likely benign6
Benign1

Top pathogenic / likely-pathogenic (1)

Variant IDHGVSClassification
146403GRCh38/hg38 17q25.3(chr17:78225356-80099979)x1Likely pathogenic

SpliceAI

1253 predictions. Top by Δscore:

VariantEffectΔscore
17:78214424:GCGG:Gdonor_gain1.0000
17:78214425:CGGG:Cdonor_loss1.0000
17:78214426:GGGTG:Gdonor_loss1.0000
17:78214427:GGTGA:Gdonor_loss1.0000
17:78214428:G:GAdonor_loss1.0000
17:78214674:TTGCA:Tacceptor_loss1.0000
17:78214676:GCAG:Gacceptor_loss1.0000
17:78214678:A:AGacceptor_gain1.0000
17:78214678:AGAT:Aacceptor_gain1.0000
17:78214679:G:GGacceptor_gain1.0000
17:78214679:GAT:Gacceptor_gain1.0000
17:78214679:GATG:Gacceptor_gain1.0000
17:78214785:CCCAT:Cdonor_gain1.0000
17:78214786:CCAT:Cdonor_gain1.0000
17:78214787:CAT:Cdonor_gain1.0000
17:78214788:AT:Adonor_gain1.0000
17:78214788:ATG:Adonor_loss1.0000
17:78214789:TGT:Tdonor_loss1.0000
17:78214790:G:GGdonor_gain1.0000
17:78214791:T:Gdonor_loss1.0000
17:78216778:AATT:Adonor_gain1.0000
17:78216782:G:GGdonor_gain1.0000
17:78223462:CAG:Cacceptor_loss1.0000
17:78223463:A:ACacceptor_loss1.0000
17:78223463:A:AGacceptor_gain1.0000
17:78223464:G:GGacceptor_gain1.0000
17:78214426:GG:Gdonor_gain0.9900
17:78214427:GG:Gdonor_gain0.9900
17:78214428:G:GGdonor_gain0.9900
17:78214429:T:Adonor_loss0.9900

AlphaMissense

953 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
17:78214767:T:AW67R1.000
17:78214767:T:CW67R1.000
17:78214769:G:CW67C1.000
17:78214769:G:TW67C1.000
17:78214768:G:CW67S0.999
17:78214389:T:AW25R0.998
17:78214389:T:CW25R0.998
17:78214391:G:CW25C0.998
17:78214391:G:TW25C0.998
17:78214693:G:AG42D0.998
17:78214696:T:CF43S0.998
17:78214737:T:CC57R0.998
17:78214768:G:TW67L0.998
17:78214746:T:CC60R0.997
17:78214759:T:CL64P0.997
17:78214786:C:AP73H0.997
17:78214681:T:CM38T0.996
17:78214692:G:CG42R0.996
17:78214693:G:TG42V0.996
17:78214748:C:GC60W0.996
17:78214764:G:CG66R0.996
17:78214767:T:GW67G0.996
17:78214368:C:AR18S0.995
17:78214395:T:CF27L0.995
17:78214397:C:AF27L0.995
17:78214397:C:GF27L0.995
17:78214695:T:CF43L0.995
17:78214697:C:AF43L0.995
17:78214697:C:GF43L0.995
17:78214737:T:AC57S0.995

dbSNP variants (sampled 300 via entrez): RS1000008750 (17:78216533 C>A,G,T), RS1000274575 (17:78221364 G>T), RS1000353713 (17:78215741 ATTC>A), RS1000691506 (17:78217062 T>A), RS1000964020 (17:78215365 C>A,T), RS1001078706 (17:78215199 C>T), RS1001124830 (17:78221332 G>A), RS1001193535 (17:78215838 G>A), RS1001260510 (17:78216280 A>G), RS1001304179 (17:78221117 G>A), RS1001406089 (17:78222096 G>A,C), RS1001428077 (17:78221894 G>A), RS1001514296 (17:78216168 G>A,C), RS1001564658 (17:78217419 A>C,G), RS1002813236 (17:78220808 C>A,G)

Disease associations

OMIM: gene MIM:603352 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

2 associations (top):

StudyTraitp-value
GCST002039_1Blood trace element (Se levels)5.000000e-06
GCST002127_11Periodontitis (Mean PAL)1.000000e-06

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5989 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

2 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,707 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL232201BENZIODARONE41,341
CHEMBL2105734SEPANTRONIUM BROMIDE2366

Clinical evidence (CIViC)

Drug × variant × indication: 2 predictive associations from 2 curated evidence items.

VariantTherapyIndicationEffectLevelCIViC
BIRC5 NUCLEAR EXPRESSIONPlatinum Compound + Taxane CompoundLung Non-small Cell CarcinomaSensitivity/ResponseCIViC BEID874
BIRC5 OverexpressionTrastuzumabHer2-receptor Positive Breast CancerResistanceCIViC BEID1449

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB variants

1 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs9904341BIRC50.000

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: other protein — Inhibitors of apoptosis (IAP) protein family

Most potent curated ligand interactions (1 total), top 1:

LigandActionAffinityParameter
compound III [PMID: 24080463]Inhibition4.6pIC50

ChEMBL bioactivities

39 potent at pChembl≥5 of 41 total, top 39 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
8.55IC502.8nMSEPANTRONIUM BROMIDE
8.52IC503nMSEPANTRONIUM BROMIDE
8.36IC504.4nMSEPANTRONIUM BROMIDE
8.10IC507.9nMSEPANTRONIUM BROMIDE
8.05IC508.9nMSEPANTRONIUM BROMIDE
7.86IC5013.9nMSEPANTRONIUM BROMIDE
7.47Kd34nMCHEMBL4793552
7.43Kd37nMCHEMBL234358
7.36Kd44nMCHEMBL234358
7.32Kd48nMCHEMBL233848
7.22Kd60nMCHEMBL272921
7.19Kd64nMCHEMBL234330
7.12Kd76nMCHEMBL234040
7.07Kd86nMCHEMBL232404
7.00Kd100nMCHEMBL234421
6.70Kd200nMCHEMBL234041
6.66Kd220nMCHEMBL396856
6.62Kd240nMCHEMBL4637348
6.58Kd260nMCHEMBL394046
6.36Kd440nMCHEMBL428195
6.31Kd490nMCHEMBL236619
6.29Kd510nMCHEMBL232402
6.28Kd530nMCHEMBL392286
6.28Kd520nMCHEMBL236620
6.21Kd620nMCHEMBL392285
6.16Kd700nMCHEMBL391681
6.16Kd700nMCHEMBL391106
6.10Kd800nMCHEMBL393124
6.09Kd810nMCHEMBL393124
6.06Kd880nMCHEMBL234608
5.93Kd1170nMCHEMBL236829
5.53Kd2980nMCHEMBL234852
5.37Kd4270nMCHEMBL4862376
5.30Kd5000nMCHEMBL391586
5.30Kd5000nMCHEMBL233218
5.24Kd5700nMCHEMBL391586
5.12Kd7560nMCHEMBL399196
5.10Kd8000nMBENZIODARONE
5.00Kd1e+04nMCHEMBL397092

PubChem BioAssay actives

41 with measured affinity, of 155 total; 33 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl)benzo[f]benzimidazol-3-ium-4,9-dione bromide2196883: Inhibition of survivin in Melphalan Resistant human RPMI-8226 cells assessed as reduction of cell growth incubated for 72 hrs by CellTiter 96 aqueous one solution cell proliferation assayic500.0028uM
N-[[5-chloro-3-[5-cyano-4-[2-iodo-5-(trifluoromethyl)phenyl]-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methyl-1-propylpiperidine-4-carboxamide1685623: Binding affinity to recombinant full length N-terminal GST-tagged human survivin expressed in Escherichia coli BL21 incubated for 1 hr under shaking condition by fluorescence microplate reader assaykd0.0340uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methyl-1-propylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.0370uM
1-acetyl-N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]piperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.0480uM
1-butanoyl-N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.0600uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-1-(2-methoxyacetyl)-N-methylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.0640uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methyl-3-morpholin-4-ylpropanamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.0760uM
1-acetyl-N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.0860uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-1-(cyclohexanecarbonyl)-N-methylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.1000uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-4-methoxy-N-methylcyclohexane-1-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.2000uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methyl-1-pentylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.2200uM
3-[5-[(E)-[[6-(2,3-dimethylanilino)-[1,2,5]oxadiazolo[3,4-b]pyrazin-5-yl]hydrazinylidene]methyl]furan-2-yl]benzoic acid2025456: Binding affinity to Survivin (unknown origin) assessed as dissociation constant by fluorogenic assaykd0.2400uM
tert-butyl 4-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl-methylcarbamoyl]piperidine-1-carboxylate295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.2600uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methyl-3-pyrrolidin-1-ylpropanamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.4400uM
6-(5-bromo-2-hydroxyphenyl)-4-[2-chloro-5-(trifluoromethyl)phenyl]-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.4900uM
6-(5-cyclopentyl-2-hydroxyphenyl)-4-(2,5-dichlorophenyl)-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.5100uM
6-(5-chloro-2-hydroxyphenyl)-4-[2-chloro-5-(trifluoromethyl)phenyl]-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.5200uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methylpiperidine-4-carboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.5300uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]-N-methylcyclohexanecarboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.6200uM
4-(2,5-dichlorophenyl)-6-(2-hydroxy-5-phenylphenyl)-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.7000uM
6-(5-bromo-2-hydroxyphenyl)-4-(2,4-dimethylphenyl)-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.7000uM
6-(5-bromo-2-hydroxyphenyl)-4-(2,5-dichlorophenyl)-2-oxo-1H-pyridine-3-carbonitrile437473: Inhibition of survivinkd0.8000uM
N-[[5-chloro-3-[4-[2-chloro-5-(trifluoromethyl)phenyl]-5-cyano-6-oxo-1H-pyridin-2-yl]-2-hydroxyphenyl]methyl]cyclohexanecarboxamide295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd0.8800uM
6-(5-bromo-2-hydroxyphenyl)-4-(2,5-dimethylphenyl)-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd1.1700uM
6-(5-cyclohexyl-2-hydroxyphenyl)-4-(2,5-dichlorophenyl)-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd2.9800uM
7-(piperidin-1-ylmethyl)-5-[[4-[4-(trifluoromethyl)phenyl]triazol-2-yl]methyl]quinolin-8-ol1770548: Binding affinity to human survivin expressed in Escherichia coli BL21 assessed as dissociation constant measured by Surface plasmon resonancekd4.2700uM
6-(5-bromo-2-hydroxyphenyl)-2-oxo-4-phenyl-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd5.0000uM
1-(4-chlorophenyl)indole295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd5.0000uM
4-(2,5-dichlorophenyl)-6-[2-hydroxy-5-(2-methylpropyl)phenyl]-2-oxo-1H-pyridine-3-carbonitrile295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd7.5600uM
(2-ethyl-1-benzofuran-3-yl)-(4-hydroxy-3,5-diiodophenyl)methanone295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd8.0000uM
3-(3-bromophenyl)quinoline295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd10.0000uM
3-[(2Z)-2-hydroxyimino-3-[4-[4-(trifluoromethoxy)phenyl]phenoxy]propyl]-5,5-dimethylimidazolidine-2,4-dione295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd10.0000uM
N-(3-chlorophenyl)naphthalen-2-amine295444: Binding affinity to human survivin expressed in Escherichia coli BL21 cells after 30 minskd10.0000uM

CTD chemical–gene interactions

436 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Arsenic Trioxideaffects expression, increases response to substance, affects response to substance, decreases expression, affects cotreatment (+4 more)35
Resveratrolincreases reaction, decreases reaction, affects cotreatment, decreases expression, increases expression28
Cisplatinincreases expression, increases phosphorylation, increases reaction, decreases response to substance, affects cotreatment (+2 more)19
Doxorubicinincreases response to substance, decreases expression, affects binding, increases reaction, affects cotreatment (+6 more)19
bisphenol Aaffects expression, decreases expression, increases expression, affects cotreatment14
Fluorouracildecreases response to substance, affects cotreatment, increases expression, decreases expression, decreases reaction (+2 more)13
sodium arsenitedecreases reaction, increases expression, decreases expression, affects expression, increases activity (+1 more)12
Curcuminaffects cotreatment, decreases expression, decreases reaction, increases expression12
Quercetinaffects cotreatment, affects binding, increases expression, decreases expression, decreases reaction12
Tretinoindecreases expression, increases reaction, affects cotreatment12
Paclitaxeldecreases response to substance, affects reaction, affects response to substance, decreases reaction, increases expression (+2 more)12
2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-oneaffects cotreatment, decreases expression, decreases reaction, increases expression, increases reaction9
benzyloxycarbonylleucyl-leucyl-leucine aldehydeaffects cotreatment, decreases reaction, increases ubiquitination, decreases expression, increases degradation (+2 more)8
Bortezomibdecreases expression, increases reaction, increases expression, affects cotreatment, increases cleavage8
Estradioldecreases reaction, increases expression, increases reaction, affects expression, decreases expression8
Celecoxibaffects binding, decreases expression, increases expression, decreases reaction, increases activity7
Sorafenibaffects cotreatment, decreases expression, decreases reaction, increases expression, decreases activity7
Vorinostatdecreases phosphorylation, affects expression, decreases reaction, increases expression, affects cotreatment (+2 more)7
(+)-JQ1 compounddecreases expression, increases reaction, decreases reaction, affects expression, affects cotreatment6
Etoposidedecreases reaction, increases response to substance, affects cotreatment, decreases response to substance, increases expression (+1 more)6
Niclosamideincreases expression, decreases expression, increases reaction, affects expression, decreases reaction6
Sulindacaffects cotreatment, increases abundance, decreases expression, decreases reaction6
alvocidibaffects cotreatment, decreases expression, decreases reaction, increases expression, increases phosphorylation (+1 more)5
SB 203580affects cotreatment, affects expression, affects reaction, decreases expression, decreases reaction (+1 more)5
Acetylcysteinedecreases expression, decreases reaction5
Benzo(a)pyrenedecreases expression, increases methylation, decreases reaction5
Oxygenincreases expression, affects cotreatment, decreases expression, increases reaction, affects expression (+2 more)5
Plant Extractsaffects cotreatment, decreases expression, decreases reaction, increases expression5
methylselenic acidaffects cotreatment, decreases expression, affects binding, decreases reaction4
deguelindecreases reaction, increases expression, decreases expression4

ChEMBL screening assays

65 unique, capped per target: 63 binding, 2 functional

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1056061BindingInhibition of survivinDiscovery of colon tumor cell growth inhibitory agents through a combinatorial approach. — Eur J Med Chem
CHEMBL4618209FunctionalIn vivo inhibition of survivin in NSG mouse xenografted in human PC3 cells assessed as reduction in survivin expression at 100 mg/kg, po administered via gavage every other day for 10 times and measured post last dose by Western blot analysSynthesis and Identification of a Novel Lead Targeting Survivin Dimerization for Proteasome-Dependent Degradation. — J Med Chem

Cellosaurus cell lines

1 cell lines: 1 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_A8ULHEK293-SurvivinTransformed cell lineFemale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.