BIRC6
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Also known as BRUCE
Summary
BIRC6 (baculoviral IAP repeat containing 6, HGNC:13516) is a protein-coding gene on chromosome 2p22.3, encoding Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6 (Q9NR09). Anti-apoptotic protein known as inhibitor of apoptosis (IAP) which can regulate cell death by controlling caspases and by acting as an E3 ubiquitin-protein ligase. It is a selective cancer dependency (DepMap: 27.4% of cell lines).
This gene encodes a protein with a BIR (baculoviral inhibition of apoptosis protein repeat) domain and a UBCc (ubiquitin-conjugating enzyme E2, catalytic) domain. This protein inhibits apoptosis by facilitating the degradation of apoptotic proteins by ubiquitination.
Source: NCBI Gene 57448 — RefSeq curated summary.
At a glance
- GWAS associations: 9
- Clinical variants (ClinVar): 742 total — 7 pathogenic, 2 likely-pathogenic
- Phenotypes (HPO): 1
- Cancer driver (intOGen): loss-of-function (tumor-suppressor-like) across 15 cancer types
- Cancer dependency (DepMap): dependent in 27.4% of screened cell lines
- MANE Select transcript:
NM_016252
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:13516 |
| Approved symbol | BIRC6 |
| Name | baculoviral IAP repeat containing 6 |
| Location | 2p22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | BRUCE |
| Ensembl gene | ENSG00000115760 |
| Ensembl biotype | protein_coding |
| OMIM | 605638 |
| Entrez | 57448 |
Gene structure
Transcript identifiers
Ensembl transcripts: 15 — 9 retained_intron, 5 protein_coding, 1 nonsense_mediated_decay
ENST00000421745, ENST00000431454, ENST00000444173, ENST00000461788, ENST00000462504, ENST00000465130, ENST00000466527, ENST00000470250, ENST00000471232, ENST00000483194, ENST00000496555, ENST00000497023, ENST00000648282, ENST00000700518, ENST00000700519
RefSeq mRNA: 2 — MANE Select: NM_016252
NM_001378125, NM_016252
CCDS: CCDS33175
Canonical transcript exons
ENST00000421745 — 74 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000743520 | 32357023 | 32357486 |
| ENSE00000743524 | 32377588 | 32377769 |
| ENSE00000743528 | 32380153 | 32380290 |
| ENSE00000743532 | 32388750 | 32388943 |
| ENSE00000743537 | 32401163 | 32401385 |
| ENSE00000743538 | 32401463 | 32401623 |
| ENSE00000743539 | 32406499 | 32406557 |
| ENSE00000743540 | 32414769 | 32416163 |
| ENSE00000743541 | 32429146 | 32429295 |
| ENSE00000743542 | 32430865 | 32431090 |
| ENSE00000743543 | 32433644 | 32433804 |
| ENSE00000743544 | 32435496 | 32435585 |
| ENSE00000743545 | 32436053 | 32436184 |
| ENSE00000743547 | 32441329 | 32441462 |
| ENSE00000743551 | 32442324 | 32442455 |
| ENSE00000743552 | 32443491 | 32443588 |
| ENSE00000743556 | 32463194 | 32463381 |
| ENSE00000743557 | 32464509 | 32464823 |
| ENSE00000743558 | 32465065 | 32465164 |
| ENSE00000743559 | 32467525 | 32467739 |
| ENSE00000743560 | 32467903 | 32468111 |
| ENSE00000743561 | 32468437 | 32468783 |
| ENSE00000743563 | 32469395 | 32469614 |
| ENSE00000743564 | 32470168 | 32470301 |
| ENSE00000743565 | 32471014 | 32471124 |
| ENSE00000743566 | 32473112 | 32473239 |
| ENSE00000743567 | 32476213 | 32476344 |
| ENSE00000743569 | 32477368 | 32477583 |
| ENSE00000743570 | 32478635 | 32478818 |
| ENSE00000743572 | 32479462 | 32479617 |
| ENSE00000743574 | 32481320 | 32481453 |
| ENSE00000743578 | 32485643 | 32485759 |
| ENSE00000743580 | 32487647 | 32487801 |
| ENSE00000743583 | 32488588 | 32488714 |
| ENSE00000743585 | 32490041 | 32490151 |
| ENSE00000743588 | 32491425 | 32491558 |
| ENSE00000743591 | 32493540 | 32493667 |
| ENSE00000743593 | 32499547 | 32500109 |
| ENSE00000743595 | 32501713 | 32501888 |
| ENSE00000743597 | 32502795 | 32502891 |
| ENSE00000743604 | 32505005 | 32505205 |
| ENSE00000743607 | 32507980 | 32508259 |
| ENSE00000743610 | 32509738 | 32509994 |
| ENSE00000743616 | 32512933 | 32513154 |
| ENSE00000743619 | 32514990 | 32515770 |
| ENSE00000743629 | 32524888 | 32525019 |
| ENSE00000809493 | 32448795 | 32448928 |
| ENSE00000809494 | 32482429 | 32482582 |
| ENSE00001189810 | 32453808 | 32453942 |
| ENSE00001504515 | 32518817 | 32518946 |
| ENSE00001652421 | 32439508 | 32439686 |
| ENSE00001846447 | 32617725 | 32618878 |
| ENSE00003459762 | 32392039 | 32392150 |
| ENSE00003460510 | 32611448 | 32611582 |
| ENSE00003469795 | 32510526 | 32510634 |
| ENSE00003475481 | 32442065 | 32442226 |
| ENSE00003478034 | 32445521 | 32445668 |
| ENSE00003494267 | 32599739 | 32599900 |
| ENSE00003513036 | 32543241 | 32543541 |
| ENSE00003527613 | 32547850 | 32548014 |
| ENSE00003532910 | 32545643 | 32545860 |
| ENSE00003553771 | 32603006 | 32603083 |
| ENSE00003561761 | 32503042 | 32503236 |
| ENSE00003562657 | 32597751 | 32597968 |
| ENSE00003576196 | 32575156 | 32575366 |
| ENSE00003621497 | 32607455 | 32607643 |
| ENSE00003628338 | 32595034 | 32595144 |
| ENSE00003645442 | 32395511 | 32395593 |
| ENSE00003665324 | 32531355 | 32531551 |
| ENSE00003674432 | 32518254 | 32518397 |
| ENSE00003677966 | 32525464 | 32525628 |
| ENSE00003681985 | 32593915 | 32594060 |
| ENSE00003685003 | 32529651 | 32529824 |
| ENSE00003686812 | 32549313 | 32549481 |
Expression profiles
Bgee: expression breadth ubiquitous, 256 present calls, max score 98.48.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 41.6838 / max 677.8579, expressed in 1820 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 19641 | 39.5726 | 1818 |
| 19639 | 1.3789 | 735 |
| 19642 | 0.3738 | 161 |
| 19640 | 0.2830 | 118 |
| 202150 | 0.0754 | 22 |
Top tissues by expression
256 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| epithelial cell of pancreas | CL:0000083 | 98.48 | gold quality |
| oviduct epithelium | UBERON:0004804 | 98.23 | gold quality |
| calcaneal tendon | UBERON:0003701 | 97.90 | gold quality |
| pancreatic ductal cell | CL:0002079 | 97.76 | gold quality |
| adrenal tissue | UBERON:0018303 | 97.42 | gold quality |
| ileal mucosa | UBERON:0000331 | 97.18 | gold quality |
| tibialis anterior | UBERON:0001385 | 97.04 | gold quality |
| bone marrow cell | CL:0002092 | 96.93 | gold quality |
| colonic epithelium | UBERON:0000397 | 96.10 | gold quality |
| corpus callosum | UBERON:0002336 | 95.83 | gold quality |
| upper arm skin | UBERON:0004263 | 95.80 | gold quality |
| cortical plate | UBERON:0005343 | 95.66 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 95.31 | gold quality |
| cauda epididymis | UBERON:0004360 | 94.73 | gold quality |
| colonic mucosa | UBERON:0000317 | 94.64 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 94.53 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 94.39 | gold quality |
| seminal vesicle | UBERON:0000998 | 94.23 | gold quality |
| tendon | UBERON:0000043 | 94.15 | gold quality |
| ganglionic eminence | UBERON:0004023 | 94.04 | gold quality |
| tonsil | UBERON:0002372 | 93.98 | gold quality |
| sural nerve | UBERON:0015488 | 93.97 | gold quality |
| ventricular zone | UBERON:0003053 | 93.95 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 93.86 | gold quality |
| buccal mucosa cell | CL:0002336 | 93.83 | gold quality |
| deltoid | UBERON:0001476 | 93.80 | gold quality |
| skin of hip | UBERON:0001554 | 93.69 | gold quality |
| jejunal mucosa | UBERON:0000399 | 93.65 | gold quality |
| upper leg skin | UBERON:0004262 | 93.47 | gold quality |
| corpus epididymis | UBERON:0004359 | 93.35 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 9.91 |
| E-CURD-135 | no | 813.58 |
| E-GEOD-100618 | no | 547.95 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
132 targeting BIRC6, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3925-3P | 100.00 | 69.95 | 1237 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4789-5P | 99.98 | 70.76 | 2721 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-568 | 99.98 | 69.86 | 2084 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-1229-3P | 99.97 | 66.49 | 906 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-548AA | 99.96 | 70.64 | 3753 |
| HSA-MIR-548AP-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-548T-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-3910 | 99.95 | 71.13 | 2227 |
| HSA-MIR-9718 | 99.94 | 68.91 | 918 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-4760-3P | 99.93 | 70.50 | 2385 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 27.4% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- Overexpression of Nrdp1 promotes ubiquitination and proteasomal degradation of BRUCE. (PMID:14765125)
- Apollon binds to, ubiquitinates and facilitates proteasomal degradation of SMAC and caspase-9, results suggesting that Apollon has an essential function in preventing SMAC-induced apoptosis (PMID:15300255)
- the ability of BRUCE to antagonize both the precursor and mature forms of Smac and caspase-9 is an important mechanism for the prevention of apoptosis under normal conditions (PMID:15507451)
- Study identifies BRUCE, a 528 kDa multifunctional protein, which processes ubiquitin-conjugating activity, as a major regulator of abscission; during cytokinesis, BRUCE moves from the vesicular system to the midbody ring. (PMID:18329369)
- p53 stabilisation and caspase-3 activation concur to determine the apoptotic response mediated by Apollon knockdown in breast cancer cells. (PMID:19223905)
- Gene knockdown of apollon inhibits cell proliferation, induces apoptosis, arrests cell cycle at S phase, and enhances the chemo-sensitivity of colorectal cancer Lovo cells to 5-FU, DDP and EPI. (PMID:21542283)
- Based on the data presented here we propose that BIRC6 protects the cancer stem cell fraction of colorectal tumors against oxaliplatin and cisplatin (PMID:21788403)
- Dowregulating Apollon with siRNA can enhance the chemosensitivity of hepatocellular carcinoma cells in vitro. (PMID:22027771)
- BIRC6 gene expression could be considered as an adverse risk factor in childhood acute leukemia (PMID:22085301)
- results indicated that Apollon plays a relevant role in melanoma resistance to apoptosis by antitumor agents that trigger the intrinsic or the extrinsic apoptosis pathways (PMID:22553342)
- Knockdown experiments were performed using BIRC6 lentiviral shRNA and phenotype responses were analyzed by Western blot and MTT-assays.Upon silencing of BIRC6 by shRNA, DIABLO protein levels increased and cells went into apoptosis. (PMID:22788920)
- Elevated expression of BIRC6 protein in non-small-cell lung cancers is associated with cancer recurrence and chemoresistance. (PMID:23287853)
- APPOLON to be a novel regulator of mitotic CYCLIN A degradation independent of SAC. (PMID:24302728)
- The expression of BIRC6 in the cytoplasm is associated with epithelial ovarian cancer (EOC) differentiation and may be a novel predictor for poor prognosis of EOC patients after curative resection. (PMID:24453032)
- The study demonstrates that the T allele of the rs2754511 in the BIRC6 gene plays a protective role in pseudoexfoliative glaucoma patients of the Pakistani population. (PMID:25118708)
- Humanin signaling pathway via htHNR/JAKs/STAT3 increased the expression levels of mRNA and protein of Apollon/Bruce, an unusual member of the inhibitors of apoptosis proteins (PMID:25138702)
- findings demonstrate that BIRC6 overexpression in hepatocellular carcinoma specimens is indicative of poor prognosis and that its interaction with p53 facilitates the degradation of p53 (PMID:25196217)
- BRUCE acts as a scaffold, bridging the ubiquitin-specific peptidase 8 (USP8) and BRIT1 in a complex to coordinate USP8-catalyzed deubiquitination of BRIT1. (PMID:25733871)
- BIRC6 overexpression is a predictor of poor prognosis in colorectal cancer and could be a potential target for colorectal cancer therapy. (PMID:25933218)
- Results show that in addition to the scaffolding function in complex formation, BRUCE has an E3 ligase function to promote BRIT1 deubiquitination by USP8 leading to accumulation of BRIT1 at DNA double-strand break. (PMID:26683461)
- Apollon gene silencing can induce apoptosis and growth impairment in HeLa cells. In this regard, apollon can be considered a candidate therapeutic target in HeLa cells as a positive human papillomavirus cancer cell line. (PMID:26748613)
- AVEN and BIRC6 are inhibited by combination therapy of miR-30e and proanthocyanidin in glioblastoma stem cells (PMID:27388765)
- Apollon expression is associated with the biological characteristics of esophageal squamous cell carcinoma (ESCC), and may be a valuable prognostic factor and a novel chemotherapeutic target for ESCC treatment. (PMID:27432467)
- Since specific expression of BRUCE protein was revealed in majority of gastric carcinoma tissues, BRUCE protein may be a useful therapeutic target for cancer therapy. (PMID:27614745)
- BRUCE protein was detected in 82% of tumors and tumor progression stage and invasion depth correlated significantly with BRUCE protein expression (PMID:27649954)
- BIRC6 targeting inhibited the growth of enzalutamide-resistant castration-resistant prostate cancer models and may represent a new option for clinical treatment of advanced, enzalutamide-resistant prostate cancer (PMID:27663589)
- Apollon role in the multidrug resistance of human chronic myelogenous leukemia cells (PMID:28358418)
- circBIRC6 and circCORO1C are functionally associated with the pluripotent state in undifferentiated human embryonic stem cells (PMID:29074849)
- Data indicate BRUCE/Apollon/Birc6, an inhibitor of apoptosis protein (IAP), as a new autophagy regulator. (PMID:29426817)
- Our study shows that BIRC6 is upregulated in prostate cancer and is associated with aggressive tumor progression. Moreover, elevated level of BIRC6 predicts poor prognosis for prostate cancer patients, and BIRC6 can regulate prostate cancer cell proliferation and apoptosis in vitro. (PMID:29429983)
- The miR-204 may play an anti-carcinogenic role in AML and function as a novel biomarker and therapeutic target for the treatment of this disease. (PMID:29764561)
- Circ-BIRC6 is upregulated in hepatocellular carcinoma tissues and is associated with poor prognosis of hepatocellular carcinoma patients, and promotes hepatocellular carcinoma progression by targeting the miR-3918/Bcl2 axis. (PMID:30931701)
- These findings demonstrate that UBA6 and BIRC6 negatively regulate autophagy by limiting the availability of LC3B. (PMID:31692446)
- MALAT1 knockdown inhibits prostate cancer progression by regulating miR-140/BIRC6 axis. (PMID:31935634)
- Besides the anti-apoptotic functions, recent discoveries have revealed that XIAP, survivin, and BRUCE also exhibit regulatory functions for autophagy in cells. As the role of autophagy in human diseases has already been discussed extensively in different reviews, this review will discuss the emerging autophagic role of XIAP, survivin, and BRUCE in cancer cells. (PMID:32019552)
- BIRC6 Is Associated with Vulnerability of Carotid Atherosclerotic Plaque. (PMID:33317170)
- Silencing circBIRC6 inhibits the proliferation, invasion, migration and epithelialmesenchymal transition of bladder cancer cells by targeting the miR4953p/XBP1 signaling axis. (PMID:34542161)
- BIRC6 modifies risk of invasive bacterial infection in Kenyan children. (PMID:35866869)
- Oral Squamous Cell Carcinoma: The Role of BIRC6 Serum Level. (PMID:36033570)
- Exploring the Role of the Inhibitor of Apoptosis BIRC6 in Breast Cancer: A Database Analysis. (PMID:36455174)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | birc6 | ENSDARG00000074166 |
| mus_musculus | Birc6 | ENSMUSG00000024073 |
| rattus_norvegicus | Birc6 | ENSRNOG00000027191 |
| drosophila_melanogaster | Bruce | FBGN0266717 |
| caenorhabditis_elegans | WBGENE00006712 |
Paralogs (7): BIRC3 (ENSG00000023445), BIRC5 (ENSG00000089685), NLRC4 (ENSG00000091106), BIRC7 (ENSG00000101197), XIAP (ENSG00000101966), BIRC2 (ENSG00000110330), NAIP (ENSG00000249437)
Protein
Protein identifiers
Dual E2 ubiquitin-conjugating enzyme/E3 ubiquitin-protein ligase BIRC6 — Q9NR09 (reviewed: Q9NR09)
Alternative names: BIR repeat-containing ubiquitin-conjugating enzyme, Baculoviral IAP repeat-containing protein 6, Ubiquitin-conjugating BIR domain enzyme apollon
All UniProt accessions (6): Q9NR09, A0A3B3IUB9, A0A8V8TQB4, A0A8V8TR92, H7C094, H7C3P0
UniProt curated annotations — full annotation on UniProt →
Function. Anti-apoptotic protein known as inhibitor of apoptosis (IAP) which can regulate cell death by controlling caspases and by acting as an E3 ubiquitin-protein ligase. Unlike most IAPs, does not contain a RING domain and it is not a RING-type E3 ligase. Instead acts as a dual E2/E3 enzyme that combines ubiquitin conjugating (E2) and ubiquitin ligase (E3) activities in a single polypeptide. Ubiquitination is mediated by a non-canonical E1 ubiquitin activating enzyme UBA6. Ubiquitinates CASP3, CASP7 and CASP9 and inhibits their caspase activity; also ubiquitinates their procaspases but to a weaker extent. Ubiquitinates pro-apoptotic factors DIABLO/SMAC and HTRA2. DIABLO/SMAC antagonizes the caspase inhibition activity of BIRC6 by competing for the same binding sites as the caspases. Ubiquitinates the autophagy protein MAP1LC3B; this activity is also inhibited by DIABLO/SMAC. Important regulator for the final stages of cytokinesis. Crucial for normal vesicle targeting to the site of abscission, but also for the integrity of the midbody and the midbody ring, and its striking ubiquitin modification.
Subunit / interactions. Homodimer; antiparallel. Interacts with RNF41. Interacts with DIABLO/SMAC, likely with higher affinity to SMAC dimer than SMAC monomer; this interaction blocks the substrate-binding site and inhibits the caspase inhibition activity of BIRC6. Interacts with KIF23/MKLP1, USP8/UBPY, BIRC5/survivin, MAP2K1/MEK1, RAB8A/RAB8, RAB11A/RAB11, PLK1, EXOC3/SEC6 and EXOC4/SEC8.
Subcellular location. Golgi apparatus. trans-Golgi network membrane. Endosome. Cytoplasm. Cytoskeleton. Spindle pole. Microtubule organizing center. Centrosome. Midbody. Midbody ring.
Tissue specificity. Expressed in brain cancer cells.
Post-translational modifications. Ubiquitinated; mediated by RNF41 E3 ligase and leads to proteasomal degradation, impairing inhibition of apoptosis. Deubiquitinated by USP8/UBPY. Autoubiquitinated; mediated by E1 ubiquitin activating enzyme UBA6. Proteolytically cleaved. Acts as substrate for CASP3, CASP6, CASP7, CASP9 and HTRA2.
Activity regulation. Inhibited by DIABLO/SMAC, which competes for the substrate-binding sites on BIRC6. BIRC6 inhibits caspases and protease by ubiquitination but BIRC6 itself is subjected to protease cleavage by CASP3, CASP6, CASP7, CASP9 and HTRA2 by protease cleavage.
Domain organisation. The BIR domain is essential for its anti-apoptotic function and is important for binding to DIABLO/SMAC and caspases.
Similarity. Belongs to the BIRC6 family.
RefSeq proteins (2): NP_001365054, NP_057336* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000608 | UBC | Domain |
| IPR001370 | BIR_rpt | Repeat |
| IPR016135 | UBQ-conjugating_enzyme/RWD | Homologous_superfamily |
| IPR022103 | BIRC6 | Family |
Pfam: PF00179, PF00653, PF12356
UniProt features (243 total): helix 97, strand 65, turn 25, mutagenesis site 12, modified residue 10, region of interest 9, repeat 8, compositionally biased region 7, binding site 4, domain 2, sequence conflict 2, chain 1, active site 1
Structure
Experimental structures (PDB)
22 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8E2E | ELECTRON MICROSCOPY | 1.98 |
| 3CEG | X-RAY DIFFRACTION | 2.01 |
| 8E2D | ELECTRON MICROSCOPY | 2.07 |
| 8E2H | ELECTRON MICROSCOPY | 2.3 |
| 8E2F | ELECTRON MICROSCOPY | 2.47 |
| 8E2G | ELECTRON MICROSCOPY | 2.99 |
| 8ATO | ELECTRON MICROSCOPY | 3 |
| 8E2I | ELECTRON MICROSCOPY | 3.04 |
| 9QH5 | ELECTRON MICROSCOPY | 3.09 |
| 8E2K | ELECTRON MICROSCOPY | 3.21 |
| 8ATM | ELECTRON MICROSCOPY | 3.3 |
| 8ATU | ELECTRON MICROSCOPY | 3.3 |
| 9QIV | ELECTRON MICROSCOPY | 3.44 |
| 9QIM | ELECTRON MICROSCOPY | 3.57 |
| 9QGW | ELECTRON MICROSCOPY | 3.62 |
| 9QIP | ELECTRON MICROSCOPY | 4.15 |
| 9QIO | ELECTRON MICROSCOPY | 4.22 |
| 9QHI | ELECTRON MICROSCOPY | 4.27 |
| 9QIA | ELECTRON MICROSCOPY | 4.38 |
| 8AUK | ELECTRON MICROSCOPY | 6.2 |
| 8ATX | ELECTRON MICROSCOPY | 7 |
| 8AUW | ELECTRON MICROSCOPY | 7.2 |
Predicted structure (AlphaFold)
No AlphaFold model available for Q9NR09 — AlphaFold DB does not currently provide models for proteins above ~3000 aa.
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 4666 (glycyl thioester intermediate)
Ligand- & substrate-binding residues (4): 328; 331; 348; 355
Post-translational modifications (10): 473, 480, 482, 581, 590, 1710, 2222, 2955, 3931, 4023
Mutagenesis-validated functional residues (12):
| Position | Phenotype |
|---|---|
| 328 | impairs ubiquitination of casp3, casp7 and htra2 mutant ‘a-306’; when associated with s-331. abolishes interaction with |
| 331 | impairs ubiquitination of casp3, casp7 and htra2 mutant ‘a-306’; when associated with s-328. abolishes interaction with |
| 342 | abolishes interaction with casp3 and the caspase inhibition activity on casp3. impairs interaction with casp7 and abolis |
| 342 | fails to ubiquitinate n-degron peptide from htra2. impairs diablo/smac inhibition on the ubiquitination of map1lc3b by b |
| 351 | impairs interaction with casp3 and abolishes the caspase inhibition activity on casp3. impairs interaction with casp7 bu |
| 1616–1666 | slightly impairs interaction with diablo/smac. abolishes interaction with diablo/smac and impairs ubiquitination of diab |
| 2228–2295 | impairs diablo/smac inhibition on the ubiquitination of map1lc3b by birc6. enhances ubiquitination of diablo/smac. sever |
| 3189–3193 | impairs interaction with monomeric diablo/smac ’d-81’ mutant. |
| 3189–3193 | impairs interaction with casp7 and mildly impairs the caspase inhibition activity on casp7. impairs interaction with mon |
| 3190–3193 | no effect on diablo/smac inhibition on the ubiquitination of map1lc3b by birc6. no effect on ubiquitination of diablo/sm |
| 4094–4145 | impairs map1lc3b ubiquitination without disrupting htra2 ubiquitination. |
| 4666 | catalytically inactive; fails to autoubiquitinate in the presence of uba6. |
Function
Pathways and Gene Ontology
Reactome pathways
5 pathways
| ID | Pathway |
|---|---|
| R-HSA-9700645 | ALK mutants bind TKIs |
| R-HSA-9725370 | Signaling by ALK fusions and activated point mutants |
| R-HSA-1643685 | Disease |
| R-HSA-5663202 | Diseases of signal transduction by growth factor receptors and second messengers |
| R-HSA-9700206 | Signaling by ALK in cancer |
MSigDB gene sets: 180 (showing top):
TGGTGCT_MIR29A_MIR29B_MIR29C, GOBP_LABYRINTHINE_LAYER_DEVELOPMENT, GOBP_EMBRYO_DEVELOPMENT_ENDING_IN_BIRTH_OR_EGG_HATCHING, ACTACCT_MIR196A_MIR196B, TGCACTT_MIR519C_MIR519B_MIR519A, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, GOCC_MICROTUBULE_ORGANIZING_CENTER, GOBP_NEGATIVE_REGULATION_OF_EXTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, GOBP_EMBRYONIC_PLACENTA_DEVELOPMENT, GOCC_TRANS_GOLGI_NETWORK, GOBP_IN_UTERO_EMBRYONIC_DEVELOPMENT, GOBP_APOPTOTIC_SIGNALING_PATHWAY, GOBP_CYTOKINESIS, GOBP_REGULATION_OF_CELL_CYCLE
GO Biological Process (13): protein phosphorylation (GO:0006468), apoptotic process (GO:0006915), cell population proliferation (GO:0008283), positive regulation of cell population proliferation (GO:0008284), protein ubiquitination (GO:0016567), regulation of cytokinesis (GO:0032465), regulation of cell population proliferation (GO:0042127), negative regulation of apoptotic process (GO:0043066), cell division (GO:0051301), labyrinthine layer development (GO:0060711), negative regulation of extrinsic apoptotic signaling pathway (GO:2001237), placenta development (GO:0001890), regulation of apoptotic process (GO:0042981)
GO Molecular Function (8): ubiquitin-protein transferase activity (GO:0004842), cysteine-type endopeptidase inhibitor activity (GO:0004869), metal ion binding (GO:0046872), ubiquitin conjugating enzyme activity (GO:0061631), protein binding (GO:0005515), transferase activity (GO:0016740), peptidase inhibitor activity (GO:0030414), ubiquitin protein ligase activity (GO:0061630)
GO Cellular Component (13): spindle pole (GO:0000922), nucleus (GO:0005634), endosome (GO:0005768), trans-Golgi network (GO:0005802), centrosome (GO:0005813), microtubule organizing center (GO:0005815), cytosol (GO:0005829), membrane (GO:0016020), midbody (GO:0030496), Flemming body (GO:0090543), cytoplasm (GO:0005737), Golgi apparatus (GO:0005794), cytoskeleton (GO:0005856)
Reactome top-level categories
Rollup of top-3 pathways:
| Category | Pathways |
|---|---|
| Signaling by ALK in cancer | 2 |
| Disease | 1 |
| Diseases of signal transduction by growth factor receptors and second messengers | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 7 |
| cellular process | 2 |
| cell population proliferation | 2 |
| apoptotic process | 2 |
| ubiquitin-protein transferase activity | 2 |
| intracellular membrane-bounded organelle | 2 |
| endomembrane system | 2 |
| cytoplasm | 2 |
| phosphorylation | 1 |
| protein modification process | 1 |
| programmed cell death | 1 |
| apoptotic signaling pathway | 1 |
| execution phase of apoptosis | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| protein modification by small protein conjugation | 1 |
| cytokinesis | 1 |
| regulation of cell cycle process | 1 |
| regulation of cell division | 1 |
| regulation of cellular process | 1 |
| regulation of apoptotic process | 1 |
| negative regulation of programmed cell death | 1 |
| embryonic placenta development | 1 |
| anatomical structure development | 1 |
| extrinsic apoptotic signaling pathway | 1 |
| negative regulation of apoptotic signaling pathway | 1 |
| regulation of extrinsic apoptotic signaling pathway | 1 |
| animal organ development | 1 |
| regulation of programmed cell death | 1 |
| ubiquitin-like protein transferase activity | 1 |
| cysteine-type endopeptidase activity | 1 |
| endopeptidase inhibitor activity | 1 |
| cation binding | 1 |
| ubiquitin-like protein conjugating enzyme activity | 1 |
| binding | 1 |
| catalytic activity | 1 |
| enzyme inhibitor activity | 1 |
| peptidase activity | 1 |
| peptidase regulator activity | 1 |
| ubiquitin-like protein ligase activity | 1 |
Protein interactions and networks
STRING
5290 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| BIRC6 | BIRC7 | Q96CA5 | 917 |
| BIRC6 | RNF41 | Q9H4P4 | 847 |
| BIRC6 | XIAP | P98170 | 832 |
| BIRC6 | CASP9 | P55211 | 788 |
| BIRC6 | DIABLO | Q9NR28 | 764 |
| BIRC6 | USP8 | P40818 | 722 |
| BIRC6 | KIF23 | Q02241 | 718 |
| BIRC6 | HTRA2 | O43464 | 688 |
| BIRC6 | CASP3 | P42574 | 653 |
| BIRC6 | KCNJ11 | Q14654 | 638 |
| BIRC6 | TTC27 | Q6P3X3 | 566 |
| BIRC6 | DAD1 | P46966 | 533 |
| BIRC6 | MYCBP2 | O75592 | 514 |
| BIRC6 | NEURL4 | Q96JN8 | 463 |
| BIRC6 | UBA6 | A0AVT1 | 450 |
IntAct
202 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CAPN1 | CAPNS1 | psi-mi:“MI:0914”(association) | 0.840 |
| SNX6 | SNX2 | psi-mi:“MI:0914”(association) | 0.800 |
| CCDC22 | VPS26C | psi-mi:“MI:0914”(association) | 0.790 |
| KRT31 | HGS | psi-mi:“MI:0914”(association) | 0.780 |
| LDOC1 | PEG10 | psi-mi:“MI:0914”(association) | 0.740 |
| RPGR | NPHP4 | psi-mi:“MI:2364”(proximity) | 0.730 |
| PSMC5 | PSMD11 | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| TMEM266 | KDM1A | psi-mi:“MI:0914”(association) | 0.670 |
| PLK1 | EVI5 | psi-mi:“MI:0914”(association) | 0.660 |
| AGRP | TK1 | psi-mi:“MI:0914”(association) | 0.640 |
| VEGFD | ADAM9 | psi-mi:“MI:0914”(association) | 0.640 |
| RALBP1 | JUN | psi-mi:“MI:0914”(association) | 0.640 |
| BIRC6 | PLK1 | psi-mi:“MI:0403”(colocalization) | 0.600 |
| BIRC6 | PLK1 | psi-mi:“MI:0915”(physical association) | 0.600 |
| PLK1 | BIRC6 | psi-mi:“MI:0915”(physical association) | 0.600 |
| BIRC6 | EXOC4 | psi-mi:“MI:0403”(colocalization) | 0.560 |
| EXOC4 | BIRC6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| BIRC6 | EXOC4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KIF23 | BIRC6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| BIRC6 | KIF23 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KIF23 | BIRC6 | psi-mi:“MI:0403”(colocalization) | 0.560 |
| NEURL4 | APBB1 | psi-mi:“MI:0914”(association) | 0.530 |
BioGRID (413): BIRC6 (Biochemical Activity), DIABLO (Reconstituted Complex), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS), BIRC6 (Affinity Capture-MS)
ESM2 similar proteins: A0A140LFM6, A0A1B0GUA6, A0JMD2, A2VCZ5, A5WUT8, A6H5Y1, A6NKB5, B8JKP6, D3ZJ47, F1M5M3, F1MJR8, M0R5D6, O14513, O60284, P0CAX8, Q0P4S0, Q15468, Q1LV19, Q1RMQ5, Q4V7H1, Q5DU28, Q5DW34, Q5REU9, Q5SW75, Q5SWW4, Q5U4U4, Q5ZM13, Q60664, Q60988, Q6P9N1, Q6ZPK7, Q76I76, Q76I79, Q80TA9, Q80TY4, Q8BLN6, Q8BYM7, Q8IWB6, Q8JGS1, Q8K2J4
Diamond homologs: A1E2V0, A1L020, A1L3F4, A5D8Q0, A9JTP3, A9ULZ2, D3ZDI6, E3SCZ8, O08863, O10296, O10324, O14064, O15392, O62640, O70201, O88738, P40629, P41435, P41436, P41437, P41454, P47732, P98170, Q05AK5, Q0WPJ7, Q13489, Q13490, Q28ER3, Q28H51, Q50L39, Q557E7, Q5BKL8, Q5R881, Q5RAH9, Q60989, Q62210, Q69Z36, Q6I6F4, Q6J1J1, Q6NTT6
SIGNOR signaling
3 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| BIRC6 | down-regulates | CASP3 | binding |
| “Ub:E1 (UBA1 substrate)” | “up-regulates activity” | BIRC6 | ubiquitination |
| “Ub:E1 (UBA6 substrate)” | “up-regulates activity” | BIRC6 | ubiquitination |
Disease & clinical
Cancer significance
From intOGen — cancer-driver classification: loss-of-function (tumor-suppressor-like) across 15 cancer types — ANSC, BLCA, BRCA, CCRCC, CHOL, COADREAD, DLBCLNOS, HCC, HNSC, LUAD, MGCT, MT…(+3 more).
Clinical variants and AI predictions
ClinVar
742 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 7 |
| Likely pathogenic | 2 |
| Uncertain significance | 527 |
| Likely benign | 53 |
| Benign | 47 |
Top pathogenic / likely-pathogenic (9)
| Variant ID | HGVS | Classification |
|---|---|---|
| 219057 | Single allele | Pathogenic |
| 219060 | Single allele | Pathogenic |
| 219087 | Single allele | Pathogenic |
| 2684431 | GRCh37/hg19 2p23.1-22.3(chr2:32083215-32684402)x1 | Pathogenic |
| 60108 | GRCh38/hg38 2p23.1-22.3(chr2:31370181-32512769)x1 | Pathogenic |
| 625542 | GRCh37/hg19 2p22.3(chr2:32339736-32875274) | Pathogenic |
| 685336 | GRCh37/hg19 2p23.1-22.3(chr2:31958977-33946495)x1 | Pathogenic |
| 545277 | NC_000002.12:g.(?32528746)(32559427_?)del | Likely pathogenic |
| 988099 | NC_000002.11:g.(32289091_32312562)_(32958959_32999928)del | Likely pathogenic |
SpliceAI
12305 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 2:32357484:GTG:G | donor_gain | 1.0000 |
| 2:32357487:G:GA | donor_loss | 1.0000 |
| 2:32357487:G:GG | donor_gain | 1.0000 |
| 2:32357488:T:A | donor_loss | 1.0000 |
| 2:32377586:A:AG | acceptor_gain | 1.0000 |
| 2:32377587:G:GT | acceptor_gain | 1.0000 |
| 2:32377587:GCT:G | acceptor_gain | 1.0000 |
| 2:32377587:GCTA:G | acceptor_gain | 1.0000 |
| 2:32377766:AGAG:A | donor_gain | 1.0000 |
| 2:32377767:GAG:G | donor_gain | 1.0000 |
| 2:32377767:GAGG:G | donor_gain | 1.0000 |
| 2:32377768:AGGT:A | donor_loss | 1.0000 |
| 2:32377769:GGTA:G | donor_loss | 1.0000 |
| 2:32377770:G:C | donor_loss | 1.0000 |
| 2:32377770:G:GG | donor_gain | 1.0000 |
| 2:32377771:T:G | donor_loss | 1.0000 |
| 2:32380286:CTAAG:C | donor_loss | 1.0000 |
| 2:32380287:TAAG:T | donor_loss | 1.0000 |
| 2:32380288:AAGG:A | donor_loss | 1.0000 |
| 2:32380290:GGTAA:G | donor_loss | 1.0000 |
| 2:32380291:G:C | donor_loss | 1.0000 |
| 2:32380292:T:A | donor_loss | 1.0000 |
| 2:32380918:A:G | donor_gain | 1.0000 |
| 2:32380940:GAAAT:G | donor_gain | 1.0000 |
| 2:32388747:CAGT:C | acceptor_loss | 1.0000 |
| 2:32388748:A:AG | acceptor_gain | 1.0000 |
| 2:32388748:AGT:A | acceptor_gain | 1.0000 |
| 2:32388748:AGTG:A | acceptor_gain | 1.0000 |
| 2:32388748:AGTGG:A | acceptor_gain | 1.0000 |
| 2:32388749:G:GT | acceptor_gain | 1.0000 |
AlphaMissense
31644 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 2:32377672:G:T | R137M | 1.000 |
| 2:32380153:G:C | A170P | 1.000 |
| 2:32380232:T:C | L196P | 1.000 |
| 2:32388750:T:A | W216R | 1.000 |
| 2:32388750:T:C | W216R | 1.000 |
| 2:32388752:G:C | W216C | 1.000 |
| 2:32388752:G:T | W216C | 1.000 |
| 2:32388820:T:C | L239P | 1.000 |
| 2:32392064:A:G | R289G | 1.000 |
| 2:32392065:G:C | R289T | 1.000 |
| 2:32392065:G:T | R289I | 1.000 |
| 2:32392066:A:C | R289S | 1.000 |
| 2:32392066:A:T | R289S | 1.000 |
| 2:32392076:T:C | F293L | 1.000 |
| 2:32392077:T:C | F293S | 1.000 |
| 2:32392078:T:A | F293L | 1.000 |
| 2:32392078:T:G | F293L | 1.000 |
| 2:32392085:T:A | W296R | 1.000 |
| 2:32392085:T:C | W296R | 1.000 |
| 2:32392087:G:C | W296C | 1.000 |
| 2:32392087:G:T | W296C | 1.000 |
| 2:32392106:T:A | W303R | 1.000 |
| 2:32392106:T:C | W303R | 1.000 |
| 2:32392108:G:C | W303C | 1.000 |
| 2:32392108:G:T | W303C | 1.000 |
| 2:32392134:C:A | A312D | 1.000 |
| 2:32392136:G:A | G313R | 1.000 |
| 2:32392136:G:C | G313R | 1.000 |
| 2:32392137:G:A | G313E | 1.000 |
| 2:32392137:G:T | G313V | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000012621 (2:32368546 CAAATAAAT>C,CAAAT,CAAATAAATAAAT), RS1000016902 (2:32616415 C>T), RS1000018059 (2:32542320 G>T), RS1000047407 (2:32472688 C>T), RS1000051893 (2:32446056 A>G), RS1000060026 (2:32512609 C>G), RS1000069122 (2:32616071 T>C), RS1000078141 (2:32616073 T>C), RS1000080083 (2:32518111 C>A,T), RS1000083990 (2:32581479 C>T), RS1000108017 (2:32457453 T>A,C,G), RS1000108864 (2:32463643 C>T), RS1000111404 (2:32593028 G>A), RS1000133135 (2:32512875 T>C), RS1000133515 (2:32551482 C>T)
Disease associations
OMIM: gene MIM:605638 | disease phenotypes: MIM:182601, MIM:181500
GenCC curated gene-disease
Mondo (4): hereditary spastic paraplegia 4 (MONDO:0008438), schizophrenia (MONDO:0005090), hereditary breast ovarian cancer syndrome (MONDO:0003582), autism spectrum disorder (MONDO:0005258)
Orphanet (4): Autosomal dominant spastic paraplegia type 4 (Orphanet:100985), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145), NON RARE IN EUROPE: Schizophrenia (Orphanet:3140), NON RARE IN EUROPE: Autism (Orphanet:106)
HPO phenotypes
1 total (1 of 1 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0100753 | Schizophrenia |
GWAS associations
9 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006661_237 | Male-pattern baldness | 7.000000e-26 |
| GCST006661_313 | Male-pattern baldness | 2.000000e-20 |
| GCST006661_314 | Male-pattern baldness | 4.000000e-20 |
| GCST007323_98 | Risk-taking tendency (4-domain principal component model) | 2.000000e-09 |
| GCST007325_39 | General risk tolerance (MTAG) | 4.000000e-08 |
| GCST007576_79 | Chronotype | 4.000000e-09 |
| GCST008526_13 | Coffee consumption | 9.000000e-07 |
| GCST010002_387 | Refractive error | 2.000000e-09 |
| GCST90002404_14 | Red cell distribution width | 5.000000e-19 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008579 | risk-taking behaviour |
| EFO:0008328 | chronotype measurement |
| EFO:0006781 | coffee consumption measurement |
| EFO:0009188 | Red cell distribution width |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D061325 | Hereditary Breast and Ovarian Cancer Syndrome | C04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431 |
| C536865 | Spastic paraplegia 4, autosomal dominant (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — Inhibitors of apoptosis (IAP) protein family
CTD chemical–gene interactions
42 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Cisplatin | affects cotreatment, decreases expression, decreases response to substance | 3 |
| bisphenol A | decreases expression, decreases methylation | 2 |
| Benzo(a)pyrene | affects methylation, increases mutagenesis | 2 |
| Estradiol | increases expression | 2 |
| Fluorouracil | affects response to substance, decreases response to substance | 2 |
| Aflatoxin B1 | increases methylation, decreases methylation | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| triphenyl phosphate | affects expression | 1 |
| propylparaben | increases expression | 1 |
| beta-lapachone | increases expression | 1 |
| arsenite | affects binding, decreases reaction | 1 |
| sodium arsenite | decreases expression, increases abundance | 1 |
| tetrabromobisphenol A | increases expression | 1 |
| manganese chloride | decreases expression, increases abundance | 1 |
| aflatoxin B2 | decreases methylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| K 7174 | increases expression | 1 |
| 2,2’,4,4’-tetrabromodiphenyl ether | increases expression | 1 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| brevetoxin 2 | increases expression | 1 |
| 5-OH-BDE-47 | decreases expression | 1 |
| 6-OH-BDE-47 | decreases expression | 1 |
| Zoledronic Acid | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Arsenic | decreases expression, increases abundance | 1 |
| Atrazine | decreases expression | 1 |
| Caffeine | affects phosphorylation | 1 |
| Dieldrin | increases response to substance | 1 |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_SF21 | HAP1 BIRC6 (-) 1 | Cancer cell line | Male |
| CVCL_SF22 | HAP1 BIRC6 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00000374 | PHASE4 | COMPLETED | Treatment for First-Episode Schizophrenia |
| NCT00001656 | PHASE4 | COMPLETED | Comparison of Clozapine vs Olanzapine in Childhood-Onset Psychotic Disorders |
| NCT00007774 | PHASE4 | COMPLETED | To Determine if Olanzapine is More Cost Effective Than Haloperidol for the Treatment of Schizophrenia |
| NCT00014001 | PHASE4 | COMPLETED | CATIE- Schizophrenia Trial |
| NCT00018668 | PHASE4 | COMPLETED | Antipsychotic Response in Schizophrenia |
| NCT00034801 | PHASE4 | COMPLETED | Olanzapine Versus Active Comparator in the Treatment of Depression in Patients With Schizophrenia |
| NCT00034905 | PHASE4 | COMPLETED | A Comparison of Seroquel vs. Risperidone in Schizophrenia |
| NCT00036088 | PHASE4 | COMPLETED | Olanzapine Versus An Active Comparator in the Treatment of Schizophrenia |
| NCT00044187 | PHASE4 | COMPLETED | The Assessment of a Weight-Gain Agent for the Treatment of Olanzapine-Associated Anti-Obesity Agent in Patients With Schizophrenia, Schizophreniform Disorder, Schizoaffective Disorder, and Bipolar I Disorder |
| NCT00044655 | PHASE4 | COMPLETED | Switching Medication to Treat Schizophrenia |
| NCT00048828 | PHASE4 | COMPLETED | Treating Drug-Resistant Childhood Schizophrenia |
| NCT00053703 | PHASE4 | COMPLETED | Treatment of Early Onset Schizophrenia Spectrum Disorders (TEOSS) |
| NCT00056498 | PHASE4 | COMPLETED | Risperidone Treatment in Schizophrenia Patients Who Are Currently Taking Clozapine |
| NCT00061802 | PHASE4 | COMPLETED | Efficacy and Safety of Two Atypical Antipsychotics vs. Placebo in Patients With an Acute Exacerbation of Either Schizophrenia or Schizoaffective Disorder |
| NCT00080327 | PHASE4 | COMPLETED | Study of Three Doses of Aripiprazole in Patients With Acute Schizophrenia |
| NCT00088049 | PHASE4 | COMPLETED | Study of Olanzapine vs. Aripiprazole in the Treatment of Schizophrenia |
| NCT00090012 | PHASE4 | COMPLETED | Comparison of Continuing Olanzapine to Switching to Quetiapine in Overweight or Obese Patients With Schizophrenia and Schizoaffective Disorder |
| NCT00100776 | PHASE4 | COMPLETED | Efficacy of High Dose Olanzapine for the Treatment of Schizophrenia and Schizoaffective Disorder |
| NCT00103571 | PHASE4 | COMPLETED | Olanzapine Versus Aripiprazole in the Treatment of Acutely Ill Patients With Schizophrenia |
| NCT00108368 | PHASE4 | COMPLETED | The Effects of Risperidone and Olanzapine on Thinking |
| NCT00114595 | PHASE4 | COMPLETED | Ethyl-Eicosapentaenoic Acid and Tardive Dyskinesia |
| NCT00130923 | PHASE4 | COMPLETED | Risperidone Long-acting Versus Oral Risperidone in Patients With Schizophrenia and Alcohol Use Disorder |
| NCT00137020 | PHASE4 | COMPLETED | Clinical Effect Of Cross Titration Of Antipsychotics With Ziprasidone In Schizophrenia Or Schizoaffective Disorder |
| NCT00140166 | PHASE4 | COMPLETED | Treatment of Acute Schizophrenia With Vitamin Therapy |
| NCT00145847 | PHASE4 | COMPLETED | Naltrexone Treatment of Alcohol Abuse in Schizophrenia |
| NCT00148564 | PHASE4 | COMPLETED | Energy Homeostasis Under Treatment With Atypical Antipsychotics |
| NCT00156715 | PHASE4 | COMPLETED | Efficacy of Quetiapine in the Treatment of Patients With Schizophrenia and a Comorbid Substance Use Disorder |
| NCT00158223 | PHASE4 | COMPLETED | Effectiveness of Pimozide in Augmenting the Effects of Clozapine in the Treatment of Schizophrenia |
| NCT00159081 | PHASE4 | COMPLETED | One Year Drug Treatment in First-Episode Schizophrenia |
| NCT00159120 | PHASE4 | COMPLETED | Maintenance Treatment vs. Stepwise Drug Discontinuation in First-Episode Schizophrenia |
| NCT00159133 | PHASE4 | COMPLETED | Prodrome-Based Early Intervention With Antipsychotics vs. Benzodiazepines in First-Episode Schizophrenia |
| NCT00159757 | PHASE4 | TERMINATED | 12 Week Open, Non-Comparative Switch Study Of Oral Ziprazidone In Previously Treated Schizophrenic Patients |
| NCT00167817 | PHASE4 | COMPLETED | Effect of Switch to Aripiprazole on Health and Smoking Parameters in Patients With Schizophrenia: A Pilot Study |
| NCT00169026 | PHASE4 | TERMINATED | Alcoholism and Schizophrenia: Effects of Clozapine |
| NCT00169039 | PHASE4 | TERMINATED | Clozapine Versus Chlorpromazine for Treatment-Unresponsive Schizophrenia |
| NCT00169065 | PHASE4 | COMPLETED | Effectiveness of Clozapine Versus Olanzapine for Treatment-resistant Schizophrenia |
| NCT00169091 | PHASE4 | TERMINATED | Clozapine Versus Haloperidol for Treating the First Episode of Schizophrenia |
| NCT00176423 | PHASE4 | COMPLETED | Efficacy Study of Galantamine for Cognitive Impairments in Schizophrenia |
| NCT00176436 | PHASE4 | COMPLETED | Atomoxetine for Treatment of Weight Gain in Olanzapine or Clozapine Patients |
| NCT00177008 | PHASE4 | COMPLETED | Aripiprazole for the Treatment of Schizophrenia With Co-Morbid Social Anxiety |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): alopecia, hereditary breast ovarian cancer syndrome, hereditary spastic paraplegia 4