BIVM
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Also known as FLJ20159
Summary
BIVM (basic, immunoglobulin-like variable motif containing, HGNC:16034) is a protein-coding gene on chromosome 13q33.1, encoding Basic immunoglobulin-like variable motif-containing protein (Q86UB2).
Predicted to enable DNA endonuclease activity and single-stranded DNA binding activity. Predicted to be involved in DNA metabolic process. Located in extracellular space.
Source: NCBI Gene 54841 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 29 total — 4 pathogenic, 1 likely-pathogenic
- MANE Select transcript:
NM_017693
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:16034 |
| Approved symbol | BIVM |
| Name | basic, immunoglobulin-like variable motif containing |
| Location | 13q33.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ20159 |
| Ensembl gene | ENSG00000134897 |
| Ensembl biotype | protein_coding |
| OMIM | 619006 |
| Entrez | 54841 |
Gene structure
Transcript identifiers
Ensembl transcripts: 70 — 60 protein_coding, 5 nonsense_mediated_decay, 4 protein_coding_CDS_not_defined, 1 retained_intron
ENST00000257336, ENST00000448849, ENST00000474443, ENST00000481069, ENST00000490317, ENST00000491929, ENST00000651008, ENST00000651048, ENST00000651228, ENST00000651808, ENST00000651855, ENST00000651949, ENST00000652006, ENST00000652084, ENST00000652643, ENST00000652766, ENST00000909441, ENST00000909442, ENST00000909443, ENST00000909444, ENST00000909445, ENST00000909446, ENST00000909447, ENST00000909448, ENST00000909449, ENST00000909450, ENST00000909451, ENST00000909452, ENST00000909453, ENST00000909454, ENST00000909455, ENST00000909456, ENST00000909457, ENST00000909458, ENST00000909459, ENST00000909460, ENST00000909461, ENST00000909462, ENST00000909463, ENST00000909464, ENST00000909465, ENST00000909466, ENST00000909467, ENST00000909468, ENST00000909469, ENST00000909470, ENST00000909471, ENST00000918727, ENST00000918728, ENST00000918729, ENST00000918730, ENST00000918731, ENST00000918732, ENST00000918733, ENST00000962128, ENST00000962129, ENST00000962130, ENST00000962131, ENST00000962132, ENST00000962133, ENST00000962134, ENST00000962135, ENST00000962136, ENST00000962137, ENST00000962138, ENST00000962139, ENST00000962140, ENST00000962141, ENST00000962142, ENST00000962143
RefSeq mRNA: 2 — MANE Select: NM_017693
NM_001159596, NM_017693
CCDS: CCDS53879, CCDS9505
Canonical transcript exons
ENST00000257336 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001224347 | 102839572 | 102841533 |
| ENSE00001370952 | 102799119 | 102799521 |
| ENSE00001381074 | 102805307 | 102805390 |
| ENSE00002316723 | 102807146 | 102807745 |
| ENSE00003471807 | 102838643 | 102838739 |
| ENSE00003480959 | 102822065 | 102822159 |
| ENSE00003516453 | 102821743 | 102821847 |
| ENSE00003550235 | 102821037 | 102821132 |
| ENSE00003588928 | 102834466 | 102834552 |
| ENSE00003605795 | 102816428 | 102816554 |
| ENSE00003638954 | 102831565 | 102831697 |
Expression profiles
Bgee: expression breadth ubiquitous, 257 present calls, max score 93.65.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.3107 / max 9.9242, expressed in 134 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 135928 | 6.0895 | 1591 |
| 135929 | 0.3107 | 134 |
Top tissues by expression
263 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left ventricle myocardium | UBERON:0006566 | 93.65 | gold quality |
| tibialis anterior | UBERON:0001385 | 92.51 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 92.44 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 91.64 | gold quality |
| ileal mucosa | UBERON:0000331 | 91.28 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 91.17 | gold quality |
| cerebellar cortex | UBERON:0002129 | 91.15 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 90.82 | gold quality |
| metanephros cortex | UBERON:0010533 | 90.74 | gold quality |
| cortical plate | UBERON:0005343 | 90.66 | gold quality |
| cerebellum | UBERON:0002037 | 90.47 | gold quality |
| kidney epithelium | UBERON:0004819 | 89.84 | gold quality |
| tendon | UBERON:0000043 | 88.89 | gold quality |
| stromal cell of endometrium | CL:0002255 | 88.74 | gold quality |
| cortex of kidney | UBERON:0001225 | 88.70 | gold quality |
| body of pancreas | UBERON:0001150 | 88.47 | gold quality |
| cardiac atrium | UBERON:0002081 | 87.86 | gold quality |
| right atrium auricular region | UBERON:0006631 | 87.72 | gold quality |
| muscle of leg | UBERON:0001383 | 87.67 | gold quality |
| ganglionic eminence | UBERON:0004023 | 87.56 | gold quality |
| embryo | UBERON:0000922 | 87.55 | gold quality |
| deltoid | UBERON:0001476 | 87.53 | silver quality |
| gastrocnemius | UBERON:0001388 | 87.48 | gold quality |
| endometrium | UBERON:0001295 | 87.10 | gold quality |
| muscle organ | UBERON:0001630 | 87.04 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 87.04 | gold quality |
| heart left ventricle | UBERON:0002084 | 87.00 | gold quality |
| calcaneal tendon | UBERON:0003701 | 87.00 | gold quality |
| right lobe of liver | UBERON:0001114 | 86.91 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 86.84 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.33 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
98 targeting BIVM, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-146A-5P | 99.96 | 68.93 | 988 |
| HSA-MIR-146B-5P | 99.96 | 69.13 | 977 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-551B-5P | 99.96 | 71.28 | 3493 |
| HSA-MIR-767-5P | 99.95 | 70.85 | 993 |
| HSA-MIR-7153-5P | 99.94 | 68.89 | 1006 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
| HSA-MIR-381-3P | 99.93 | 71.87 | 2854 |
| HSA-MIR-300 | 99.92 | 71.76 | 2856 |
| HSA-MIR-7-1-3P | 99.91 | 71.53 | 4384 |
| HSA-MIR-7-2-3P | 99.91 | 71.40 | 4394 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-8063 | 99.91 | 69.76 | 3146 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-3065-3P | 99.87 | 70.25 | 1407 |
Literature-anchored findings (GeneRIF, showing 1)
- Identification of genetic susceptibility in preterm newborns with bronchopulmonary dysplasia by whole-exome sequencing: BIVM gene may play a role. (PMID:36757497)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | bivm | ENSDARG00000061409 |
| mus_musculus | Ercc5 | ENSMUSG00000026048 |
| mus_musculus | Bivm | ENSMUSG00000041684 |
| rattus_norvegicus | Ercc5 | ENSRNOG00000022812 |
| rattus_norvegicus | Bivm | ENSRNOG00000022894 |
Paralogs (1): ERCC5 (ENSG00000134899)
Protein
Protein identifiers
Basic immunoglobulin-like variable motif-containing protein — Q86UB2 (reviewed: Q86UB2)
All UniProt accessions (8): A0A494BZX4, A0A494C000, A0A494C0D0, A0A494C0F9, A0A494C0L8, A0A494C1A7, A0A494C1S8, Q86UB2
UniProt curated annotations — full annotation on UniProt →
Subcellular location. Cytoplasm. Nucleus.
Tissue specificity. Widely expressed. Expressed at higher level in spleen, ovary, small intestine, colon, peripheral blood leukocytes and liver. Also expressed in testis, ovary, aorta, appendix, trachea, pituitary gland, bladder, uterus, spinal cord, salivary gland, stomach, mammary gland and bone marrow. Weakly or not expressed in fetal spleen, adult thymus and certain cancer cell lines.
Similarity. Belongs to the BIVM family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q86UB2-1 | 1 | yes |
| Q86UB2-2 | 2 |
RefSeq proteins (2): NP_001153068, NP_060163* (*=MANE)
Domains & families (InterPro)
UniProt features (10 total): region of interest 3, compositionally biased region 3, splice variant 2, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q86UB2-F1 | 66.50 | 0.43 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 120 (showing top):
GOMF_ENDONUCLEASE_ACTIVITY, GOMF_NUCLEASE_ACTIVITY, TTTGTAG_MIR520D, MODULE_239, JAATINEN_HEMATOPOIETIC_STEM_CELL_UP, AGCTCCT_MIR28, GOMF_DNA_ENDONUCLEASE_ACTIVITY, GOMF_SINGLE_STRANDED_DNA_BINDING, SANSOM_APC_MYC_TARGETS, SANSOM_APC_TARGETS_REQUIRE_MYC, GOBP_DNA_METABOLIC_PROCESS, GEORGES_TARGETS_OF_MIR192_AND_MIR215, MODULE_533, HORIUCHI_WTAP_TARGETS_UP, MIKKELSEN_ES_ICP_WITH_H3K4ME3
GO Biological Process (1): DNA metabolic process (GO:0006259)
GO Molecular Function (3): single-stranded DNA binding (GO:0003697), DNA endonuclease activity (GO:0004520), protein binding (GO:0005515)
GO Cellular Component (3): obsolete extracellular space (GO:0005615), nucleus (GO:0005634), cytoplasm (GO:0005737)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| nucleic acid metabolic process | 1 |
| DNA binding | 1 |
| endonuclease activity | 1 |
| DNA nuclease activity | 1 |
| binding | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
1956 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| BIVM | POGLUT2 | Q6UW63 | 541 |
| BIVM | FAM199X | Q6PEV8 | 507 |
| BIVM | TEX9 | Q8N6V9 | 424 |
| BIVM | LRRC23 | Q53EV4 | 409 |
| BIVM | WDR27 | A2RRH5 | 408 |
| BIVM | RGPD1 | P0C839 | 394 |
| BIVM | LRRC74A | Q0VAA2 | 393 |
| BIVM | NAXD | Q8IW45 | 384 |
| BIVM | LRRC34 | Q8IZ02 | 374 |
| BIVM | DEF8 | Q6ZN54 | 369 |
| BIVM | TMTC3 | Q6ZXV5 | 356 |
| BIVM | ERCC4 | Q92889 | 356 |
| BIVM | CRYBB3 | P26998 | 353 |
| BIVM | NALCN | Q8IZF0 | 353 |
| BIVM | A0A2R8YFG2 | A0A2R8YFG2 | 353 |
| BIVM | EXOSC10 | Q01780 | 353 |
| BIVM | COL9A3 | Q14050 | 353 |
IntAct
33 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TRIM26 | BIVM | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRAF3 | BIVM | psi-mi:“MI:0915”(physical association) | 0.560 |
| SPANXN2 | BIVM | psi-mi:“MI:0915”(physical association) | 0.560 |
| BIVM | psi-mi:“MI:0915”(physical association) | 0.560 | |
| BIVM | L3MBTL2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| BIVM | TRIM41 | psi-mi:“MI:0915”(physical association) | 0.560 |
| BIVM | PPIL6 | psi-mi:“MI:0915”(physical association) | 0.560 |
| BAZ2B | BIVM | psi-mi:“MI:0915”(physical association) | 0.560 |
| LMO1 | BIVM | psi-mi:“MI:0915”(physical association) | 0.560 |
| BIVM | TRAF3 | psi-mi:“MI:0915”(physical association) | 0.000 |
| SPANXN2 | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
| BIVM | psi-mi:“MI:0915”(physical association) | 0.000 | |
| TRIM41 | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
| PPIL6 | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
| BAZ2B | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
| LMO1 | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
| L3MBTL2 | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
| TRAF3 | BIVM | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (14): BIVM (Two-hybrid), BIVM (Two-hybrid), BIVM (Two-hybrid), TRIM41 (Two-hybrid), LMO1 (Two-hybrid), PPIL6 (Two-hybrid), HOMEZ (Two-hybrid), TRIM26 (Two-hybrid), SPANXN2 (Two-hybrid), BIVM (Affinity Capture-MS), BIVM (Cross-Linking-MS (XL-MS)), BIVM (Cross-Linking-MS (XL-MS)), BIVM (Cross-Linking-MS (XL-MS)), BIVM (Affinity Capture-RNA)
ESM2 similar proteins: A0A2R6W1B1, A0FKI7, A2XC52, A2XTW9, A2Y0Q2, B8AMA8, B8B8I3, F4I9G2, O94972, P07106, P20067, P41135, P85828, Q5EAE9, Q5EAH9, Q5R7V3, Q5T8D3, Q5XEM9, Q5XG73, Q5XI67, Q6EPZ2, Q6GPE9, Q6IE24, Q6PCX9, Q70EL1, Q75IR6, Q76N89, Q7XUW3, Q84TV4, Q86UB2, Q8BJL1, Q8BL06, Q8CBX9, Q8H383, Q8H8C6, Q8K3A6, Q8K4P8, Q8LA16, Q8TB52, Q96S38
Diamond homologs: Q0V9T8, Q3KPR5, Q86UB2, Q8CBX9
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
29 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 1 |
| Uncertain significance | 18 |
| Likely benign | 3 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (5)
| Variant ID | HGVS | Classification |
|---|---|---|
| 144504 | GRCh38/hg38 13q32.2-33.1(chr13:98008015-103697232)x3 | Pathogenic |
| 150092 | GRCh38/hg38 13q32.3-33.2(chr13:101095590-105074548)x1 | Pathogenic |
| 2424668 | NC_000013.10:g.(?102521055)(103718599_?)del | Pathogenic |
| 815612 | GRCh37/hg19 13q32.1-33.2(chr13:96240346-106103782)x1 | Pathogenic |
| 443022 | GRCh37/hg19 13q32.2-33.1(chr13:98607855-104370539)x3 | Likely pathogenic |
SpliceAI
2323 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 13:102807745:GGTA:G | donor_loss | 1.0000 |
| 13:102807746:G:T | donor_loss | 1.0000 |
| 13:102807747:T:A | donor_loss | 1.0000 |
| 13:102816532:A:T | donor_gain | 1.0000 |
| 13:102821128:GGAAA:G | donor_gain | 1.0000 |
| 13:102821129:GAAA:G | donor_gain | 1.0000 |
| 13:102821129:GAAAG:G | donor_gain | 1.0000 |
| 13:102821130:A:T | donor_gain | 1.0000 |
| 13:102821133:G:GG | donor_gain | 1.0000 |
| 13:102834547:TAAA:T | donor_gain | 1.0000 |
| 13:102834548:AAAA:A | donor_gain | 1.0000 |
| 13:102834549:AAAA:A | donor_gain | 1.0000 |
| 13:102834553:G:GG | donor_gain | 1.0000 |
| 13:102816422:TTCTA:T | acceptor_loss | 0.9900 |
| 13:102816423:TCTA:T | acceptor_loss | 0.9900 |
| 13:102816423:TCTAG:T | acceptor_loss | 0.9900 |
| 13:102816425:TAG:T | acceptor_loss | 0.9900 |
| 13:102816425:TAGGC:T | acceptor_loss | 0.9900 |
| 13:102816426:A:AG | acceptor_gain | 0.9900 |
| 13:102816426:A:T | acceptor_loss | 0.9900 |
| 13:102816427:G:GA | acceptor_loss | 0.9900 |
| 13:102816427:G:GG | acceptor_gain | 0.9900 |
| 13:102816427:G:GT | acceptor_loss | 0.9900 |
| 13:102816427:GGC:G | acceptor_gain | 0.9900 |
| 13:102816427:GGCA:G | acceptor_gain | 0.9900 |
| 13:102816476:G:T | donor_gain | 0.9900 |
| 13:102816561:T:G | donor_gain | 0.9900 |
| 13:102821130:AAAGT:A | donor_loss | 0.9900 |
| 13:102821131:AA:A | donor_gain | 0.9900 |
| 13:102821131:AAG:A | donor_loss | 0.9900 |
AlphaMissense
3299 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 13:102821813:T:C | F258L | 1.000 |
| 13:102821815:T:A | F258L | 1.000 |
| 13:102821815:T:G | F258L | 1.000 |
| 13:102822066:T:A | W270R | 1.000 |
| 13:102822066:T:C | W270R | 1.000 |
| 13:102831627:C:G | H322D | 1.000 |
| 13:102831639:C:G | H326D | 1.000 |
| 13:102838644:T:A | W375R | 1.000 |
| 13:102838644:T:C | W375R | 1.000 |
| 13:102807688:T:A | W141R | 0.999 |
| 13:102807688:T:C | W141R | 0.999 |
| 13:102821047:A:C | S206R | 0.999 |
| 13:102821049:C:A | S206R | 0.999 |
| 13:102821049:C:G | S206R | 0.999 |
| 13:102821075:G:A | G215D | 0.999 |
| 13:102821098:T:A | W223R | 0.999 |
| 13:102821098:T:C | W223R | 0.999 |
| 13:102821786:T:C | F249L | 0.999 |
| 13:102821787:T:C | F249S | 0.999 |
| 13:102821788:T:A | F249L | 0.999 |
| 13:102821788:T:G | F249L | 0.999 |
| 13:102821814:T:C | F258S | 0.999 |
| 13:102821817:G:A | G259D | 0.999 |
| 13:102821822:T:C | F261L | 0.999 |
| 13:102821824:C:A | F261L | 0.999 |
| 13:102821824:C:G | F261L | 0.999 |
| 13:102821828:G:T | G263W | 0.999 |
| 13:102821829:G:A | G263E | 0.999 |
| 13:102821829:G:T | G263V | 0.999 |
| 13:102821833:T:A | N264K | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000029057 (13:102820969 G>A), RS1000041867 (13:102826495 CCTAA>C), RS1000055182 (13:102833537 G>C), RS1000108280 (13:102840564 G>T), RS1000152944 (13:102797996 A>G), RS1000173440 (13:102800346 G>C), RS1000209682 (13:102803685 A>G), RS1000240691 (13:102803373 C>T), RS1000271456 (13:102834403 A>G), RS1000289572 (13:102800108 G>A), RS1000292440 (13:102819956 C>A), RS1000390431 (13:102809396 C>G), RS1000414147 (13:102815822 G>C), RS1000472297 (13:102805818 T>C), RS1000519559 (13:102815588 T>A)
Disease associations
OMIM: gene MIM:619006 | disease phenotypes: MIM:606054, MIM:609637
GenCC curated gene-disease
Mondo (2): propionic acidemia (MONDO:0011628), holoprosencephaly 5 (MONDO:0012322)
Orphanet (2): Holoprosencephaly (Orphanet:2162), Propionic acidemia (Orphanet:35)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D056693 | Propionic Acidemia | C16.320.565.100.823; C18.452.648.100.823 |
| C566464 | Holoprosencephaly 5 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
45 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, increases expression | 3 |
| trichostatin A | affects cotreatment, increases expression | 2 |
| Acetaminophen | decreases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| GSK-J4 | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | decreases expression, increases abundance, affects cotreatment | 1 |
| sodium arsenite | decreases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| methacrylaldehyde | affects cotreatment, decreases expression, increases abundance | 1 |
| diallyl trisulfide | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| ICG 001 | increases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | increases expression, affects cotreatment | 1 |
| bisphenol S | affects cotreatment, decreases expression | 1 |
| NSC 689534 | decreases expression, affects binding | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Temozolomide | decreases expression | 1 |
| Zoledronic Acid | decreases expression | 1 |
| Acrolein | increases abundance, affects cotreatment, decreases expression | 1 |
| Air Pollutants | affects cotreatment, decreases expression, increases abundance | 1 |
| Ethanol | decreases expression | 1 |
| Arsenic | increases methylation | 1 |
| Carbamazepine | affects expression | 1 |
| Copper | affects binding, decreases expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Doxorubicin | increases expression | 1 |
Clinical trials (associated diseases)
19 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02426775 | PHASE3 | COMPLETED | Carglumic Acid in Methylmalonic Acidemia and Propionic Acidemia |
| NCT01341379 | PHASE2 | WITHDRAWN | Increasing Ureagenesis in Inborn Errors of Metabolism With N-Carbamylglutamate |
| NCT01597440 | PHASE2 | TERMINATED | Long-term Outcome of N-Carbamylglutamate Treatment in Propionic Acidemia and Methylmalonic Acidemia |
| NCT04732429 | PHASE2 | TERMINATED | Study of HST5040 in Subjects With Propionic or Methylmalonic Acidemia |
| NCT00645879 | PHASE1 | COMPLETED | Anaplerotic Therapy in Propionic Acidemia |
| NCT04836494 | PHASE1 | TERMINATED | A First in Human, Dose Escalation Study to Evaluate the Safety and Tolerability of BBP-671 in Healthy Volunteers and Patients With Propionic Acidemia or Methylmalonic Acidemia |
| NCT04159103 | PHASE1/PHASE2 | RECRUITING | Open-Label Study of mRNA-3927 in Participants With Propionic Acidemia |
| NCT05130437 | PHASE1/PHASE2 | RECRUITING | A Study to Assess the Long-term Safety and Clinical Activity of mRNA-3927 in Participants Previously Enrolled in the mRNA-3927-P101 Study |
| NCT02890342 | Not specified | RECRUITING | Natural History, Physiology, Microbiome and Biochemistry Studies of Propionic Acidemia |
| NCT03159026 | Not specified | COMPLETED | Review of Charts From Amish/Mennonite Variant PA Patients |
| NCT03484767 | Not specified | COMPLETED | The MaP Study: Mapping the Patient Journey in MMA and PA |
| NCT03655223 | Not specified | ENROLLING_BY_INVITATION | Early Check: Expanded Screening in Newborns |
| NCT04176523 | Not specified | RECRUITING | Understanding the Long-Term Management of Organic Acidemia Patients With CARBAGLU®: A Mixed Methods Approach |
| NCT05040178 | Not specified | RECRUITING | An Observational Study of Carbaglu® for the Treatment of MMA and PA in Adults and Pediatrics |
| NCT05330039 | Not specified | COMPLETED | Characterization of Intestinal Microbiota in Children With Inborn Errors of Metabolism (IEM) |
| NCT05438485 | Not specified | TERMINATED | Natural History Study of Patients With Methylmalonic Acidemia and Propionic Acidemia |
| NCT05687474 | Not specified | COMPLETED | Baby Detect : Genomic Newborn Screening |
| NCT05769621 | Not specified | RECRUITING | A Retrospective Study to Characterize Participants With Propionic Acidemia |
| NCT06664840 | Not specified | NOT_YET_RECRUITING | MyRareDiet A Novel Diet Tracking Tool |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): holoprosencephaly 5, propionic acidemia