BMAL2-AS1

Summary

BMAL2-AS1 (BMAL2 antisense RNA 1, HGNC:49892) is a long non-coding RNA gene on chromosome 12p11.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49892
Approved symbol	BMAL2-AS1
Name	BMAL2 antisense RNA 1
Location	12p11.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000245311
Ensembl biotype	lncRNA
Entrez	101928646
RNAcentral	URS000075C2DD — lncRNA, 829 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000500498, ENST00000755732

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000500498 — 4 exons

Exon	Start	End
ENSE00001962489	27394424	27394623
ENSE00001975041	27390395	27390489
ENSE00001983889	27446497	27446625
ENSE00001989613	27389789	27390168

Expression profiles

Bgee: expression breadth ubiquitous, 110 present calls, max score 86.63.

Top tissues by expression

207 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.63	gold quality
buccal mucosa cell	CL:0002336	79.43	gold quality
colonic epithelium	UBERON:0000397	76.67	gold quality
bone marrow cell	CL:0002092	66.74	silver quality
lower esophagus mucosa	UBERON:0035834	65.45	gold quality
cortical plate	UBERON:0005343	65.22	gold quality
ectocervix	UBERON:0012249	62.73	gold quality
right lobe of liver	UBERON:0001114	60.28	gold quality
esophagus mucosa	UBERON:0002469	57.65	gold quality
esophagus	UBERON:0001043	55.70	gold quality
vagina	UBERON:0000996	55.04	gold quality
uterine cervix	UBERON:0000002	54.00	gold quality
lower lobe of lung	UBERON:0008949	53.09	silver quality
prefrontal cortex	UBERON:0000451	52.55	gold quality
monocyte	CL:0000576	52.29	silver quality
stromal cell of endometrium	CL:0002255	51.97	silver quality
vermiform appendix	UBERON:0001154	49.93	gold quality
skin of abdomen	UBERON:0001416	49.75	gold quality
tonsil	UBERON:0002372	49.73	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	49.52	gold quality
left ovary	UBERON:0002119	49.38	gold quality
minor salivary gland	UBERON:0001830	48.64	gold quality
islet of Langerhans	UBERON:0000006	48.50	gold quality
skin of leg	UBERON:0001511	48.30	gold quality
zone of skin	UBERON:0000014	47.64	gold quality
gall bladder	UBERON:0002110	47.07	gold quality
popliteal artery	UBERON:0002250	46.87	gold quality
mouth mucosa	UBERON:0003729	46.85	gold quality
tibial artery	UBERON:0007610	46.80	gold quality
subcutaneous adipose tissue	UBERON:0002190	46.71	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.