BMX

gene
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Also known as ETKPSCTK3

Summary

BMX (BMX non-receptor tyrosine kinase, HGNC:1079) is a protein-coding gene on chromosome Xp22.2, encoding Cytoplasmic tyrosine-protein kinase BMX (P51813). Non-receptor tyrosine kinase that plays central but diverse modulatory roles in various signaling processes involved in the regulation of actin reorganization, cell migration, cell proliferation and survival, cell adhesion, and apoptosis.

This gene encodes a non-receptor tyrosine kinase belonging to the Tec kinase family. The protein contains a PH-like domain, which mediates membrane targeting by binding to phosphatidylinositol 3,4,5-triphosphate (PIP3), and a SH2 domain that binds to tyrosine-phosphorylated proteins and functions in signal transduction. The protein is implicated in several signal transduction pathways including the Stat pathway, and regulates differentiation and tumorigenicity of several types of cancer cells. Alternatively spliced transcript variants have been found for this gene.

Source: NCBI Gene 660 — RefSeq curated summary.

At a glance

  • Clinical variants (ClinVar): 46 total — 1 pathogenic
  • Druggable target: yes — 33 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_203281

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:1079
Approved symbolBMX
NameBMX non-receptor tyrosine kinase
LocationXp22.2
Locus typegene with protein product
StatusApproved
AliasesETK, PSCTK3
Ensembl geneENSG00000102010
Ensembl biotypeprotein_coding
OMIM300101
Entrez660

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 7 protein_coding, 2 protein_coding_CDS_not_defined

ENST00000342014, ENST00000348343, ENST00000357607, ENST00000463891, ENST00000489983, ENST00000867197, ENST00000867198, ENST00000942875, ENST00000942876

RefSeq mRNA: 3 — MANE Select: NM_203281 NM_001320866, NM_001721, NM_203281

CCDS: CCDS14168

Canonical transcript exons

ENST00000348343 — 19 exons

ExonStartEnd
ENSE000006658651554680315546921
ENSE000006658671554307115543135
ENSE000006658681554198215542198
ENSE000006658711553421215534339
ENSE000006658761552234615522587
ENSE000006658781551792915517993
ENSE000008574211550834515508491
ENSE000013661591550080715500940
ENSE000014346211554984015549997
ENSE000035042671551611215516231
ENSE000035066921552604215526095
ENSE000035267381552997315530027
ENSE000035381511551143715511518
ENSE000035610791553635315536427
ENSE000036049281550932915509433
ENSE000036122611553132815531407
ENSE000036293281553713415537305
ENSE000036511541552528815525365
ENSE000038437971555607315556519

Expression profiles

Bgee: expression breadth ubiquitous, 173 present calls, max score 95.55.

FANTOM5 (CAGE): breadth broad, TPM avg 2.2985 / max 111.5732, expressed in 214 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter IDTPM avgSamples expressed
1956051.9813204
1956040.139960
1956060.127879
1956080.03129
1956090.01301
1956070.00521

Top tissues by expression

289 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
corpus epididymisUBERON:000435995.55gold quality
right atrium auricular regionUBERON:000663179.50gold quality
cardiac atriumUBERON:000208179.18gold quality
bone marrowUBERON:000237178.44gold quality
cardiac muscle of right atriumUBERON:000337978.33silver quality
male germ line stem cell (sensu Vertebrata) in testisCL:0000089 ∩ UBERON:000047376.99gold quality
right coronary arteryUBERON:000162575.77gold quality
subcutaneous adipose tissueUBERON:000219075.74gold quality
right lungUBERON:000216774.71gold quality
calcaneal tendonUBERON:000370174.71gold quality
urethraUBERON:000005774.66gold quality
colonic epitheliumUBERON:000039774.64gold quality
mucosa of transverse colonUBERON:000499174.47gold quality
cauda epididymisUBERON:000436074.45gold quality
tibial arteryUBERON:000761074.39gold quality
bone marrow cellCL:000209274.35gold quality
popliteal arteryUBERON:000225074.34gold quality
bloodUBERON:000017873.71gold quality
left ventricle myocardiumUBERON:000656673.55gold quality
aortaUBERON:000094773.17gold quality
omental fat padUBERON:001041473.09gold quality
peritoneumUBERON:000235873.01gold quality
ascending aortaUBERON:000149672.08gold quality
thoracic aortaUBERON:000151571.91gold quality
adipose tissue of abdominal regionUBERON:000780871.36gold quality
left coronary arteryUBERON:000162671.34gold quality
small intestine Peyer’s patchUBERON:000345471.14gold quality
coronary arteryUBERON:000162170.62gold quality
gall bladderUBERON:000211070.23gold quality
heartUBERON:000094869.99gold quality

Single-cell (SCXA)

Detected in 3 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes6.22
E-MTAB-8410no3.07
E-MTAB-6678no2.43

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): STAT5A

miRNA regulators (miRDB)

48 targeting BMX, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-5692A100.0074.406850
HSA-MIR-340-5P100.0072.504437
HSA-MIR-3646100.0073.565283
HSA-MIR-366299.9973.825684
HSA-MIR-103A-3P99.9869.141595
HSA-MIR-10799.9869.141595
HSA-MIR-569699.9872.364487
HSA-MIR-548AJ-3P99.9673.385345
HSA-MIR-548X-3P99.9673.385345
HSA-MIR-548J-3P99.9472.614881
HSA-MIR-548AE-3P99.9372.664867
HSA-MIR-548AQ-3P99.9372.664867
HSA-MIR-548AH-3P99.9372.544872
HSA-MIR-548AM-3P99.9372.544872
HSA-MIR-338-5P99.9272.342951
HSA-MIR-497-5P99.9271.832674
HSA-MIR-15A-5P99.9072.802787
HSA-MIR-15B-5P99.9072.782798
HSA-MIR-16-5P99.9072.802780
HSA-MIR-195-5P99.9072.812805
HSA-MIR-424-5P99.8971.902641
HSA-MIR-6838-5P99.8971.942690
HSA-MIR-391999.8769.452489
HSA-MIR-579-3P99.8671.663628
HSA-MIR-664B-3P99.8471.653590
HSA-MIR-4799-5P99.8270.602663
HSA-MIR-142-5P99.4870.922416
HSA-MIR-5590-3P99.4870.912429
HSA-MIR-513A-3P99.3970.633620
HSA-MIR-513C-3P99.3970.633620

Literature-anchored findings (GeneRIF, showing 39)

  • possible role in regulation of vesicle trafficking (PMID:11877430)
  • BMX/Etk is a TNFR2-specific kinase involved in TNF-induced angiogenic events (PMID:12370298)
  • Etk activation is essential for transducing the EGF-induced apoptotic signaling in breast cancer cells. (PMID:14676838)
  • Pim1 and Etk are required for IL6-induced activation of androgen receptor-mediated transcription in prostate cancer. (PMID:14981536)
  • Bmx is a downstream Rap1 effector in VEGF-induced endothelial cell activation. (PMID:15207703)
  • two isoforms of Pim-1 kinase may regulate distinct substrates and the 44 kDa Pim-1 may play a more prominent role in drug resistance in prostate cancer cells and interact directly with tyrosine kinase Etk/BMX (PMID:16186805)
  • Etk transgenic mouse model may be a useful tool for studying the functions of Etk and identification of new molecular markers and drug targets relevant to human diseases. (PMID:16912182)
  • Role of Bmx in ischemia-mediated arteriogenesis/angiogenesis: response to ischemia, enhanced in transgenic mice. (PMID:16932810)
  • results demonstrate that Bmx is a critical downstream target of the constitutively active PI 3-kinase in PTEN-deficient PCa cells and further show that Bmx is recruited by the EGF receptor and ErbB3 and activated in response to their respective ligands (PMID:17823122)
  • Mechanisms regulating IL-6 production led to the discovery that the Tec kinase bone marrow tyrosine kinase gene in chromosome X (Bmx) regulates Toll-like receptor 4-induced IL-6 production. (PMID:18025155)
  • Etk/Bmx may have different biological roles in tumor and nontumor cells, and may be involved in regulating hepatocyte differentiation by c-Fos activation in HCC. (PMID:18196928)
  • In fibroblast-like synoviocytes of rheumatoid arthritis patients, Etk is implicated in the cross-talk between focal adhesion kinase (FAK) and myeloid differentiation factor 88 (MyD88) pathways. (PMID:18292575)
  • Bmx kinase activity in fibroblasts from rheumatoid synovium is increased following LPS stimulation; Bmx is involved in the regulation of LPS-induced IL-6 and VEGF production via mRNA stabilisation. (PMID:18402776)
  • Pretreatment of umbilical vein cells with a pharmacologic inhibitor of Bmx, LFM-A13, produced significant radiosensitization of endothelial cells measured by clonogenic survival analysis and apoptosis. (PMID:18413754)
  • BMX is associated with multi-drug resistance of K562/HHT cell line. (PMID:19951526)
  • high expression of Etk occurs in 74.6% of SCLC cases, but only in 40% of NSCLC cases, and there is marked difference in the expression levels of Bcl-2, Bcl-X(L) and p53 between Etk-positive and Etk-negative SCLC cases (PMID:20206622)
  • by preventing binding of Etk/Bmx to PAR(1) -C-tail, hPar1 oncogenic properties are abrogated (PMID:20559570)
  • Investigate Bmx mediates VEGF-dependent lymphangiogenic signaling. (PMID:20864667)
  • Etk/BMX may play a role in protection of NPC cells from apoptosis. (PMID:21339702)
  • Deregulation of ETK may attribute to the elevated activity of STAT3 and AKT frequently detected in bladder cancer. (PMID:21408190)
  • study concludes that BMX is an essential component of inflammatory cytokine signaling and that catalytic, as well as noncatalytic functions of BMX are involved (PMID:21471444)
  • Constitutively active STAT3 rescued the effects of BMX downregulation, supporting that BMX signals through STAT3 in glioblastoma stem cells (GSCs). (PMID:21481791)
  • This review characterizes the role of BMX in inflamamtion, cardiovascular disease and cancer. (PMID:22449076)
  • Overexpression of ETK is associated with the malignancy and disease progression of renal cell carcinoma. (PMID:24606948)
  • BMX is an antiapoptotic downstream effector of PI3K, independent of AKT. (PMID:24709422)
  • The effects of dietary K(+) on Bmx were more pronounced (PMID:24785188)
  • These findings suggested that polymorphisms of the BMX gene could be a potential predictor of clinical symptoms following mTBI. (PMID:24860816)
  • Report BMX-ARHGAP gene fusion in gastric cardia adenocarcinoma. (PMID:25499959)
  • BMX directly inhibits a core component of the intrinsic apoptosis machinery opens opportunities to improve the efficacy of existing chemotherapy by potentiating BAK-driven cell death in cancer cells. (PMID:25649765)
  • Data indicate that EPHA3 is involved in regulating the multidrug resistance (MDR) of small cell lung cancer (SCLC) via PI3K/BMX/STAT3 signaling and may be a therapeutic target in SCLC. (PMID:27101199)
  • results demonstrate that cleaved BMX is a novel N-end rule substrate, and its degradation exhibits a novel interplay between substrate phosphorylation and N-end rule degradation, revealing an increasing complex regulatory network of apoptotic proteolytic signaling cascades. (PMID:27601470)
  • The studies suggested that BMXDeltaN might play roles in lung tumorigenicity, with expression of BMXDeltaN promoting cell growth, cell migration, and cell transformation. (PMID:28422715)
  • These results suggested that BMX can promote cell proliferation through PI3K/AKT/mTOR and STAT3 signaling pathways in cervical cancer cells. (PMID:28514765)
  • Epithelial and endothelial tyrosine kinase (Etk) interacts with 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (PFKFB4) to promote small-cell lung cancer (SCLC) chemoresistance through regulation of autophagy. (PMID:29208667)
  • results demonstrate that hypoxia-dependent upregulation of BMX contributes to therapeutic resistance through a compensatory prosurvival signaling mechanism. These results also reveal the role of off-target drug effects on tumor microenvironment and development of acquired drug resistance. (PMID:29227282)
  • tyrosine kinase BMX is negatively regulated by androgen and contributes to castration-resistant prostate cancer by enhancing the phosphorylation and activation of multiple receptor tyrosine kinases following androgen deprivation therapy (PMID:30012673)
  • Linc00173 upregulated Etk through functioning as a competitive endogenous RNA (ceRNA) by “sponging” miRNA-218 and led to the upregulation of GSKIP and NDRG1, resulting in the translocation of beta-catenin. Importantly, expression analysis revealed that both Linc00173 and Etk were upregulated in SCLC patient samples and exhibiting positive Linc00173/Etk correlation (PMID:31477834)
  • BMX controls 3betaHSD1 and sex steroid biosynthesis in cancer. (PMID:36647826)
  • Preclinical spheroid models identify BMX as a therapeutic target for metastatic MYCN nonamplified neuroblastoma. (PMID:39133652)

Cross-species orthologs

2 orthologs

OrganismSymbolGene ID
mus_musculusBmxENSMUSG00000031377
rattus_norvegicusBmxENSRNOG00000003705

Paralogs (32): FGR (ENSG00000000938), MATK (ENSG00000007264), BTK (ENSG00000010671), FYN (ENSG00000010810), STYK1 (ENSG00000060140), TNK2 (ENSG00000061938), TXK (ENSG00000074966), JAK2 (ENSG00000096968), ABL1 (ENSG00000097007), PTK6 (ENSG00000101213), HCK (ENSG00000101336), CSK (ENSG00000103653), TYK2 (ENSG00000105397), JAK3 (ENSG00000105639), FRK (ENSG00000111816), ITK (ENSG00000113263), ZAP70 (ENSG00000115085), PTK2B (ENSG00000120899), SRMS (ENSG00000125508), TEC (ENSG00000135605), BLK (ENSG00000136573), ABL2 (ENSG00000143322), FER (ENSG00000151422), JAK1 (ENSG00000162434), SYK (ENSG00000165025), PTK2 (ENSG00000169398), TNK1 (ENSG00000174292), YES1 (ENSG00000176105), FES (ENSG00000182511), LCK (ENSG00000182866), SRC (ENSG00000197122), LYN (ENSG00000254087)

Protein

Protein identifiers

Cytoplasmic tyrosine-protein kinase BMXP51813 (reviewed: P51813)

Alternative names: Bone marrow tyrosine kinase gene in chromosome X protein, Epithelial and endothelial tyrosine kinase, NTK38

All UniProt accessions (1): P51813

UniProt curated annotations — full annotation on UniProt →

Function. Non-receptor tyrosine kinase that plays central but diverse modulatory roles in various signaling processes involved in the regulation of actin reorganization, cell migration, cell proliferation and survival, cell adhesion, and apoptosis. Participates in signal transduction stimulated by growth factor receptors, cytokine receptors, G-protein coupled receptors, antigen receptors and integrins. Induces tyrosine phosphorylation of BCAR1 in response to integrin regulation. Activation of BMX by integrins is mediated by PTK2/FAK1, a key mediator of integrin signaling events leading to the regulation of actin cytoskeleton and cell motility. Plays a critical role in TNF-induced angiogenesis, and implicated in the signaling of TEK and FLT1 receptors, 2 important receptor families essential for angiogenesis. Required for the phosphorylation and activation of STAT3, a transcription factor involved in cell differentiation. Also involved in interleukin-6 (IL6) induced differentiation. Also plays a role in programming adaptive cytoprotection against extracellular stress in different cell systems, salivary epithelial cells, brain endothelial cells, and dermal fibroblasts. May be involved in regulation of endocytosis through its interaction with an endosomal protein RUFY1. May also play a role in the growth and differentiation of hematopoietic cells; as well as in signal transduction in endocardial and arterial endothelial cells.

Subunit / interactions. Interacts with BCAR1, CAV1, MYD88, PTK2/FAK1, RUFY1, RUFY2, STAT3, TIRAP and TNFRSF1B.

Subcellular location. Cytoplasm.

Tissue specificity. Highly expressed in cells with great migratory potential, including endothelial cells and metastatic carcinoma cell lines.

Post-translational modifications. Phosphorylated in response to protein I/II and to LPS. Phosphorylation at Tyr-566 by SRC and by autocatalysis leads to activation and is required for STAT3 phosphorylation by BMX.

Activity regulation. TEK and vascular endothelial growth factor receptor 1 (FLT1) stimulate BMX tyrosine kinase activity. Activated by integrins through the mediation of PTK2/FAK1. Activated by TNF through the mediation of TNFRSF1B.

Cofactor. Binds 1 zinc ion per subunit.

Domain organisation. SH2 domain mediates interaction with RUFY1.

Induction. Activated by IL6/interleukin-6 through phosphatidylinositol 3-kinase (PI3-kinase) pathway. It is likely that activation occurs through binding of phosphoinositides to the PH domain.

Similarity. Belongs to the protein kinase superfamily. Tyr protein kinase family. TEC subfamily.

RefSeq proteins (3): NP_001307795, NP_001712, NP_975010* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000719Prot_kinase_domDomain
IPR000980SH2Domain
IPR001245Ser-Thr/Tyr_kinase_cat_domDomain
IPR001562Znf_Btk_motifConserved_site
IPR001849PH_domainDomain
IPR008266Tyr_kinase_ASActive_site
IPR011009Kinase-like_dom_sfHomologous_superfamily
IPR011993PH-like_dom_sfHomologous_superfamily
IPR017441Protein_kinase_ATP_BSBinding_site
IPR020635Tyr_kinase_cat_domDomain
IPR035875BMX_SH2Domain
IPR036860SH2_dom_sfHomologous_superfamily
IPR050198Non-receptor_tyrosine_kinasesFamily

Pfam: PF00017, PF00169, PF00779, PF07714

Enzyme classification (BRENDA):

  • EC 2.7.10.2 — non-specific protein-tyrosine kinase (BRENDA: 41 organisms, 396 substrates, 479 inhibitors, 43 Km, 32 kcat entries)

Substrate kinetics (BRENDA)

6 substrates with measured Km, best-characterized 6. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ATP0.014–17.6412
[KDSRC KINASE]-L-TYROSINE0.0057–0.2412
POLY(GLU4-TYR)0.018–0.65910
EEEEYIQ[DP]-8-HYDROXY-5-(N,N-DIMETHYLSULFONAMIDO0.0571
S1 PEPTIDE0.0371
EEEEY0

Catalyzed reactions (Rhea), 1 shown:

  • L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H(+) (RHEA:10596)

UniProt features (59 total): strand 18, helix 16, binding site 6, turn 4, domain 3, modified residue 3, sequence variant 2, sequence conflict 2, chain 1, mutagenesis site 1, zinc finger region 1, short sequence motif 1, active site 1

Structure

Experimental structures (PDB)

6 structures.

PDBMethodResolution (Å)
8X2AX-RAY DIFFRACTION1.3
3SXSX-RAY DIFFRACTION1.89
6I99X-RAY DIFFRACTION2
3SXRX-RAY DIFFRACTION2.4
2EKXSOLUTION NMR
2YS2SOLUTION NMR

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P51813-F176.150.45

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (1): 536 (proton acceptor)

Ligand- & substrate-binding residues (6): 143; 423–431; 445; 121; 132; 133

Post-translational modifications (3): 216, 224, 566

Mutagenesis-validated functional residues (1):

PositionPhenotype
566abolishes almost completely the src-induced phosphorylation of bmx.

Function

Pathways and Gene Ontology

Reactome pathways

9 pathways

IDPathway
R-HSA-111465Apoptotic cleavage of cellular proteins
R-HSA-1660499Synthesis of PIPs at the plasma membrane
R-HSA-109581Apoptosis
R-HSA-1430728Metabolism
R-HSA-1483255PI Metabolism
R-HSA-1483257Phospholipid metabolism
R-HSA-5357801Programmed Cell Death
R-HSA-556833Metabolism of lipids
R-HSA-75153Apoptotic execution phase

MSigDB gene sets: 158 (showing top): GOBP_PHOSPHOLIPID_METABOLIC_PROCESS, BENPORATH_ES_WITH_H3K27ME3, GOBP_PHOSPHATIDYLINOSITOL_METABOLIC_PROCESS, TGCTGCT_MIR15A_MIR16_MIR15B_MIR195_MIR424_MIR497, GOBP_ANTIGEN_RECEPTOR_MEDIATED_SIGNALING_PATHWAY, GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOCC_RUFFLE, AAAYRNCTG_UNKNOWN, GOBP_ORGANOPHOSPHATE_BIOSYNTHETIC_PROCESS, CEBPB_01, GOBP_PHOSPHOLIPID_BIOSYNTHETIC_PROCESS, GOBP_GLYCEROLIPID_METABOLIC_PROCESS, YORDY_RECIPROCAL_REGULATION_BY_ETS1_AND_SP100_DN, WEI_MYCN_TARGETS_WITH_E_BOX, GOBP_REGULATION_OF_IMMUNE_RESPONSE

GO Biological Process (10): adaptive immune response (GO:0002250), protein phosphorylation (GO:0006468), phosphatidylinositol biosynthetic process (GO:0006661), apoptotic process (GO:0006915), cell adhesion (GO:0007155), signal transduction (GO:0007165), mesoderm development (GO:0007498), intracellular signal transduction (GO:0035556), B cell receptor signaling pathway (GO:0050853), protein autophosphorylation (GO:0046777)

GO Molecular Function (10): protein tyrosine kinase activity (GO:0004713), non-membrane spanning protein tyrosine kinase activity (GO:0004715), ATP binding (GO:0005524), zinc ion binding (GO:0008270), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), metal ion binding (GO:0046872)

GO Cellular Component (5): nucleoplasm (GO:0005654), cytosol (GO:0005829), plasma membrane (GO:0005886), ruffle membrane (GO:0032587), cytoplasm (GO:0005737)

Reactome top-level categories

Rollup of top-7 pathways:

CategoryPathways
Apoptotic execution phase1
PI Metabolism1
Programmed Cell Death1
Phospholipid metabolism1
Metabolism of lipids1
Metabolism1
Apoptosis1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure3
cellular process2
intracellular anatomical structure2
immune response1
phosphorylation1
protein modification process1
biosynthetic process1
phosphatidylinositol metabolic process1
programmed cell death1
apoptotic signaling pathway1
execution phase of apoptosis1
cell communication1
signaling1
regulation of cellular process1
cellular response to stimulus1
tissue development1
signal transduction1
antigen receptor-mediated signaling pathway1
protein phosphorylation1
protein kinase activity1
protein tyrosine kinase activity1
adenyl ribonucleotide binding1
purine ribonucleoside triphosphate binding1
transition metal ion binding1
nucleoside phosphate binding1
heterocyclic compound binding1
kinase activity1
phosphotransferase activity, alcohol group as acceptor1
catalytic activity, acting on a protein1
binding1
transferase activity, transferring phosphorus-containing groups1
catalytic activity1
cation binding1
nuclear lumen1
cytoplasm1
membrane1
cell periphery1
ruffle1
cell projection membrane1
leading edge membrane1

Protein interactions and networks

STRING

1712 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
BMXSTAP1Q9ULZ2770
BMXSTAT3P40763737
BMXPLEK2Q9NYT0705
BMXPLEKP08567703
BMXRUFY2Q8WXA3524
BMXKDRP35968497
BMXJAK3P52333479
BMXEGFRP00533471
BMXPFKFB4Q16877467
BMXERBB4Q15303466
BMXCDC42P21181461
BMXERBB2P04626458
BMXGJA5P36382443
BMXEFNB2P52799440
BMXTKTL2Q9H0I9418

IntAct

52 interactions, top by confidence:

ABTypeScore
BMXSTAT3psi-mi:“MI:0915”(physical association)0.830
STAT3BMXpsi-mi:“MI:0915”(physical association)0.830
BMXBIRC2psi-mi:“MI:0915”(physical association)0.560
BMXPTPN21psi-mi:“MI:0915”(physical association)0.560
BMXHSP90AB1psi-mi:“MI:0915”(physical association)0.560
BMXPIM1psi-mi:“MI:0915”(physical association)0.540
PIM1BMXpsi-mi:“MI:0915”(physical association)0.540
PIM1BMXpsi-mi:“MI:0403”(colocalization)0.540
BMXARIH2psi-mi:“MI:0914”(association)0.530
PTPRDBMXpsi-mi:“MI:0407”(direct interaction)0.440
BMXpsi-mi:“MI:0407”(direct interaction)0.440
BMXERBB2psi-mi:“MI:0407”(direct interaction)0.440
BMXEGFRpsi-mi:“MI:0407”(direct interaction)0.440
BMXPKMpsi-mi:“MI:0217”(phosphorylation reaction)0.440
CRKBMXpsi-mi:“MI:0915”(physical association)0.400
BMXYWHAEpsi-mi:“MI:0915”(physical association)0.400
SFNBMXpsi-mi:“MI:0915”(physical association)0.400
BMXPIM1psi-mi:“MI:0915”(physical association)0.400
PIM1BMXpsi-mi:“MI:0915”(physical association)0.400
TP53BMXpsi-mi:“MI:0915”(physical association)0.400
BMXCLNKpsi-mi:“MI:0915”(physical association)0.370
BMXNOPCHAP1psi-mi:“MI:0915”(physical association)0.370
PRDM1RRASpsi-mi:“MI:0914”(association)0.350

BioGRID (103): STAT3 (Two-hybrid), BMX (Reconstituted Complex), BMX (Two-hybrid), BMX (Two-hybrid), STAT3 (Two-hybrid), PTPN21 (Two-hybrid), CC2D1B (Affinity Capture-MS), USP24 (Affinity Capture-MS), ARIH2 (Affinity Capture-MS), BMX (Affinity Capture-MS), WDR45B (Affinity Capture-MS), BMX (Affinity Capture-MS), PDCD2L (Affinity Capture-MS), COPS8 (Affinity Capture-MS), BMX (Reconstituted Complex)

ESM2 similar proteins: A7A1P0, A8WZ92, B4IT27, B5VNQ3, B6A7Q3, C0RW22, F1N9Y5, G5EC24, H2KZW3, O01798, O12990, O19064, O35495, O60674, O94921, P08458, P22517, P23458, P23561, P26818, P27466, P32865, P34635, P34892, P35626, P42159, P42687, P43405, P48025, P51813, P52332, P53356, P83104, Q00537, Q00655, Q09639, Q10056, Q12469, Q17833, Q24145

Diamond homologs: A0A2R6XIK6, A2VDU3, A7J1T0, A7J1T2, A7MBB4, A8X775, D3ZG83, F4JTP5, G5EE56, O01700, O22558, O35346, O43283, O43318, O64768, P08630, P0C8E4, P0CD62, P18106, P18160, P18161, P29317, P32577, P34152, P41239, P41240, P41241, P42680, P42686, P42690, P51813, P80192, P97504, Q00944, Q02779, Q02977, Q03145, Q05397, Q05609, Q0VBZ0

SIGNOR signaling

16 interactions.

AEffectBMechanism
BMXup-regulatesPTK2phosphorylation
TEC“up-regulates activity”BMXphosphorylation
BMX“up-regulates activity”STAT3phosphorylation
BMX“down-regulates activity”F2Rphosphorylation
SRCup-regulatesBMXphosphorylation
BTKup-regulatesBMXphosphorylation
TECup-regulatesBMXphosphorylation
BMX“up-regulates quantity”BCAR1phosphorylation
ITK“up-regulates activity”BMXphosphorylation
PTPRG“down-regulates activity”BMXdephosphorylation
9-(1-Methyl-4-pyrazolyl)-1-[1-(1-oxoprop-2-enyl)-2,3-dihydroindol-6-yl]-2-benzo[h][1,6]naphthyridinone“down-regulates activity”BMX“chemical inhibition”
BMX“up-regulates activity”RUFY1phosphorylation

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 31 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Cytokine Signaling in Immune system610.6×1e-03
Signaling by Rho GTPases57.4×7e-03
Signaling by Rho GTPases, Miro GTPases and RHOBTB357.3×7e-03

GO biological processes:

GO termPartnersFoldFDR
regulation of cell cycle513.3×5e-03
cell surface receptor signaling pathway511.4×6e-03
negative regulation of apoptotic process911.2×4e-05
positive regulation of gene expression68.3×6e-03
intracellular signal transduction68.2×6e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

46 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic1
Likely pathogenic0
Uncertain significance14
Likely benign0
Benign1

Top pathogenic / likely-pathogenic (1)

Variant IDHGVSClassification
688137GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1Pathogenic

SpliceAI

3031 predictions. Top by Δscore:

VariantEffectΔscore
X:15479723:ACTT:Adonor_loss1.0000
X:15479725:TTACT:Tdonor_loss1.0000
X:15479726:TACT:Tdonor_loss1.0000
X:15479727:A:ACdonor_gain1.0000
X:15479728:C:CTdonor_gain1.0000
X:15479728:CT:Cdonor_gain1.0000
X:15479728:CTG:Cdonor_gain1.0000
X:15479728:CTGT:Cdonor_gain1.0000
X:15479728:CTGTT:Cdonor_gain1.0000
X:15479817:TTTAA:Tacceptor_gain1.0000
X:15479818:TTAA:Tacceptor_gain1.0000
X:15479819:TAA:Tacceptor_gain1.0000
X:15479819:TAAC:Tacceptor_loss1.0000
X:15479820:AA:Aacceptor_gain1.0000
X:15479820:AAC:Aacceptor_loss1.0000
X:15479822:C:CCacceptor_gain1.0000
X:15479822:C:Tacceptor_loss1.0000
X:15479823:T:Aacceptor_loss1.0000
X:15493188:A:ACdonor_gain1.0000
X:15493189:C:CCdonor_gain1.0000
X:15493189:CG:Cdonor_gain1.0000
X:15493189:CGCTG:Cdonor_gain1.0000
X:15508340:TTTA:Tacceptor_loss1.0000
X:15508342:TA:Tacceptor_loss1.0000
X:15508343:A:AGacceptor_gain1.0000
X:15508343:AGG:Aacceptor_loss1.0000
X:15508343:AGGAT:Aacceptor_gain1.0000
X:15508344:G:GGacceptor_gain1.0000
X:15508344:GGAT:Gacceptor_gain1.0000
X:15508344:GGATG:Gacceptor_gain1.0000

AlphaMissense

4476 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
X:15531343:T:CF319L1.000
X:15531345:T:AF319L1.000
X:15531345:T:GF319L1.000
X:15534310:T:CL373P1.000
X:15537246:G:CK445N1.000
X:15537246:G:TK445N1.000
X:15542191:G:CR535P1.000
X:15542194:A:CD536A1.000
X:15542194:A:GD536G1.000
X:15542194:A:TD536V1.000
X:15543120:A:TD554V1.000
X:15543121:C:AD554E1.000
X:15543121:C:GD554E1.000
X:15546858:T:AW578R1.000
X:15546858:T:CW578R1.000
X:15546860:G:CW578C1.000
X:15546860:G:TW578C1.000
X:15546912:T:AW596R1.000
X:15546912:T:CW596R1.000
X:15549989:T:AW649R1.000
X:15549989:T:CW649R1.000
X:15556085:C:AR656S1.000
X:15508385:T:CL11P0.999
X:15508392:A:CK13N0.999
X:15508392:A:TK13N0.999
X:15508439:G:CR29P0.999
X:15508445:T:CF31S0.999
X:15508466:T:CL38P0.999
X:15511459:T:CL89P0.999
X:15511497:T:AW102R0.999

dbSNP variants (sampled 300 via entrez): RS1000009210 (X:15527253 T>C,G), RS1000064566 (X:15501225 G>A), RS1000216366 (X:15544003 C>G,T), RS1000257980 (X:15514282 C>T), RS1000283132 (X:15500852 T>A,C), RS1000332058 (X:15525745 G>A), RS1000366511 (X:15526150 T>A,G), RS1000510959 (X:15551215 T>C), RS1000548845 (X:15541278 G>A,C), RS1000813309 (X:15550788 A>G), RS1000887626 (X:15505527 G>T), RS1001056243 (X:15538438 G>A), RS1001119823 (X:15515763 T>G), RS1001172544 (X:15545688 C>T), RS1001202791 (X:15551130 G>A)

Disease associations

OMIM: gene MIM:300101 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (2): CHEMBL3834 (SINGLE PROTEIN), CHEMBL4296642 (PROTEIN FAMILY)

Molecules with ChEMBL bioactivity

33 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 69,289 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1287853FEDRATINIB43,554
CHEMBL1834657INFIGRATINIB PHOSPHATE4285
CHEMBL1852688INFIGRATINIB42,209
CHEMBL1873475IBRUTINIB47,994
CHEMBL288441BOSUTINIB412,255
CHEMBL3707348ACALABRUTINIB44,504
CHEMBL3936761ZANUBRUTINIB42,484
CHEMBL4071161TIRABRUTINIB42,170
CHEMBL4085457RITLECITINIB4708
CHEMBL5416410DASATINIB4655
CHEMBL601719CRIZOTINIB414,403
CHEMBL31965CANERTINIB38,083
CHEMBL3702854RILZABRUTINIB3851
CHEMBL4072833EVOBRUTINIB3960
CHEMBL4483575REMIBRUTINIB3569
CHEMBL603469LESTAURTINIB3
CHEMBL1230609FORETINIB23,096
CHEMBL1738757REBASTINIB21,478
CHEMBL3301625SPEBRUTINIB22,965
CHEMBL3900554BMS-986142266
CHEMBL4094440BMS-9193732
CHEMBL4114766ATUZABRUTINIB2
CHEMBL4297674BRANEBRUTINIB2
CHEMBL44GENISTEIN2
CHEMBL475251R-4062
CHEMBL5077961MILREBRUTINIB2
CHEMBL5083772BIIB-0912
CHEMBL572878TOZASERTIB2
CHEMBL607707PELITINIB2
CHEMBL1908397KW-24491

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: enzyme — Tec family

Most potent curated ligand interactions (11 total), top 11:

LigandActionAffinityParameter
compound 38 [PMID: 24915291]Inhibition9.15pIC50
ibrutinibInhibition9.1pIC50
compound 31 [PMID: 24915291]Inhibition8.72pIC50
nemtabrutinibInhibition8.28pIC50
compound 9 [PMID: 26006010]Inhibition8.12pIC50
BMX-IN-1Inhibition8.1pIC50
PRN694Inhibition7.77pIC50
acalabrutinibInhibition7.34pIC50
BIIB091Inhibition7.06pKd
ZYBT1Inhibition7.04pIC50
JNJ-64264681Inhibition6.76pIC50

Binding affinities (BindingDB)

82 measured of 106 human assays (106 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
1-[3-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]prop-2-en-1-oneIC500.8 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
IBRUTINIBIC500.8 nMUS-9278100: Inhibitors of bruton’s tyrosine kinase for the treatment of solid tumors
N-[4-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]cyclohexyl]prop-2-enamideIC501.1 nMUS-9278100: Inhibitors of bruton’s tyrosine kinase for the treatment of solid tumors
1-[(3R)-3-[[2-(2,5,8,11-tetraoxabicyclo[10.4.0]hexadeca-1(12),13,15-trien-14-ylamino)-7H-purin-6-yl]amino]piperidin-1-yl]prop-2-en-1-oneIC501.69 nMUS-11440904: Substituted pyrimidines, pharmaceutical compositions and therapeutic methods thereof
StaurosporineKD1.7 nM
N-[3-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-4-propan-2-yloxycyclohexa-2,4-dien-1-yl]-1H-pyrazole-4-carboxamideIC502.2 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
AVL-292IC503.2 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
QL-XII-44IC505.62 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
9-(1-methylpyrazol-4-yl)-1-(1-prop-2-enoyl-2,3-dihydroindol-6-yl)benzo[h][1,6]naphthyridin-2-oneIC506.73 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-X-138IC507 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
N-[5-[9-[4-(methanesulfonamido)phenyl]-2-oxobenzo[h][1,IC507.99 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(3-cyclopropylphenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC508 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
QL-XII-56IC508 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XII-46IC508.75 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
N-[3-[2-[4-amino-1-(4-hydroxycyclohexyl)pyrazolo[3,4-d]pyrimidin-3-yl]ethynyl]-4-methylphenyl]-4-methyl-3-(trifluoromethyl)benzamideIC5010 nMUS-10266537: 3-acetylenyl-pyrazole-pyrimidine derivative, and preparation method therefor and uses thereof
QL-XI-13IC5010.5 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
tert-butyl 4-amino-3-[2-[2-methyl-5-[[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]carbamoyl]phenyl]ethynyl]pyrazolo[3,4-d]pyrimidine-1-carboxylateIC5011 nMUS-10266537: 3-acetylenyl-pyrazole-pyrimidine derivative, and preparation method therefor and uses thereof
QL-XI-76IC5012 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-X-134IC5012.9 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XII-115IC5013 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XII-45IC5013 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-X-132IC5015.7 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XI-77IC5015.9 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(3-chlorophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5016 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[2-chloro-3-(trifluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5017 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
N-[3-[2-[4-amino-1-(1-methylpiperidin-4-yl)pyrazolo[3,4-d]pyrimidin-3-yl]ethynyl]-4-methylphenyl]-3-(trifluoromethyl)benzamideIC5018 nMUS-10266537: 3-acetylenyl-pyrazole-pyrimidine derivative, and preparation method therefor and uses thereof
QL-XII-51IC5018 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XII-58IC5018.1 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XII-54IC5018.5 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
1-[(3R)-3-[[2-(2,5,8,11-tetraoxabicyclo[10.4.0]hexadeca-1(12),13,15-trien-14-ylamino)-7H-purin-6-yl]amino]piperidin-1-yl]propan-1-oneIC5019.6 nMUS-11440904: Substituted pyrimidines, pharmaceutical compositions and therapeutic methods thereof
QL-XI-75IC5019.7 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[2-(trifluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5021 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
3-[2-[4-amino-1-(1-prop-2-enoylpiperidin-4-yl)pyrazolo[3,4-d]pyrimidin-3-yl]ethynyl]-4-methyl-N-[4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl]benzamideIC5022 nMUS-10266537: 3-acetylenyl-pyrazole-pyrimidine derivative, and preparation method therefor and uses thereof
5-amino-3-(1-benzylpyrazol-4-yl)-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)pyrazole-4-carboxamideIC5024 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[2-fluoro-3-(trifluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5025 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
BMS-354825KD27 nM
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(2-chlorophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5027 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(2-fluorophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5027 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
QL-XII-66IC5027.8 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[3-(trifluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5029 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[2-methyl-3-(trifluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5033 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
4-methyl-N-[3-(4-methyl-1H-imidazol-1-yl)-5-(trifluoromethyl)phenyl]-3-[(4-pyridin-3-ylpyrimidin-2-yl)amino]benzamideIC5033 nM
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(2-chloro-3-fluorophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5034 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(2-chloro-5-fluorophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5035 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(2-cyanophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5037 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[3-(difluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5037 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[(2,3-difluorophenyl)methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5038 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors
QL-XII-37IC5040.6 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
QL-XII-63IC5041 nMUS-10000483: Bone marrow on X chromosome kinase (BMX) inhibitors and uses thereof
5-amino-1-(6-but-2-ynoyl-6-azaspiro[3.4]octan-2-yl)-3-[1-[[4-chloro-3-(trifluoromethyl)phenyl]methyl]pyrazol-4-yl]pyrazole-4-carboxamideIC5046 nMUS-9975882: Heteroaromatic compounds as BTK inhibitors

ChEMBL bioactivities

437 potent at pChembl≥5 of 449 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
9.40IC500.4nMIBRUTINIB
9.40IC500.4nMCHEMBL3647964
9.40IC500.4nMCHEMBL1643976
9.39IC500.41nMCHEMBL5757288
9.30IC500.5nMIBRUTINIB
9.22IC500.6nMCHEMBL5189379
9.21IC500.62nMZANUBRUTINIB
9.15IC500.71nMCHEMBL3290148
9.10IC500.8nMIBRUTINIB
9.10IC500.8nMCHEMBL3182647
9.05IC500.9nMCHEMBL4560385
9.05IC500.9nMIBRUTINIB
9.00IC501nMBOSUTINIB
9.00IC501nMIBRUTINIB
9.00IC501nMRILZABRUTINIB
8.96IC501.1nMCHEMBL3647967
8.96IC501.1nMCHEMBL5188812
8.92IC501.2nMCHEMBL5271284
8.92IC501.21nMCHEMBL5903840
8.89IC501.3nMCHEMBL3932338
8.85IC501.4nMCHEMBL459850
8.85IC501.4nMCHEMBL5193128
8.85Kd1.4nMIBRUTINIB
8.85Kd1.4nMDASATINIB
8.82IC501.5nMBRANEBRUTINIB
8.81IC501.53nMCHEMBL1916891
8.80Kd1.6nMIBRUTINIB
8.77IC501.69nMCHEMBL5999061
8.74IC501.8nMATUZABRUTINIB
8.72IC501.9nMCHEMBL3290142
8.72IC501.9nMCHEMBL6055510
8.66IC502.2nMCHEMBL5872185
8.62IC502.4nMCHEMBL5853650
8.60IC502.5nMCHEMBL5404368
8.57IC502.7nMCHEMBL5786294
8.54IC502.9nMCHEMBL5760493
8.54IC502.9nMCHEMBL6000385
8.52IC502.99nMSTAUROSPORINE
8.52IC503nMCHEMBL6009940
8.51IC503.1nMCHEMBL5989466
8.49IC503.2nMSPEBRUTINIB
8.48IC503.3nMCHEMBL4248386
8.46IC503.5nMCHEMBL4568087
8.46IC503.5nMCHEMBL5912796
8.42IC503.8nMCHEMBL4752700
8.38IC504.2nMCHEMBL5915958
8.37IC504.3nMTIRABRUTINIB
8.35IC504.5nMCHEMBL6043477
8.28IC505.2nMCHEMBL4241958
8.28IC505.29nMSTAUROSPORINE

PubChem BioAssay actives

281 with measured affinity, of 1183 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
1-[(3S)-3-[4-amino-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]prop-2-en-1-one1784109: Inhibition of N-terminal GST-tagged BMX (1 to 675 residues) (unknown origin) expressed in Sf21 insect cells using NH2-ETVYSEVRK-biotin as substrate preincubated for 1 hr followed by ATP addition and measured after 2 hrs by ELISAic500.0004uM
Ibrutinib1781997: Inhibition of full-length N-terminal GST-tagged BMX (1 to 675 residues) (unknown origin) expressed in Sf21 insect cells using NH2-ETVYSEVRK-biotin as substrate preincubated for 1 hr followed by ATP addition and measured after 2 hrs by ELISAic500.0004uM
N-[3-[5-chloro-2-[4-(4-methylpiperazin-1-yl)anilino]pyrimidin-4-yl]oxyphenyl]prop-2-enamide2185102: Inhibition of TEL fused BMX (unknown origin) transformed in mouse BaF3 cellsic500.0004uM
Ritlecitinib1802326: TR-FRET Competition Assay from Article 10.1021/acschembio.6b00677: “Discovery of a JAK3-Selective Inhibitor: Functional Differentiation of JAK3-Selective Inhibition over pan-JAK or JAK1-Selective Inhibition.”ki0.0005uM
Zanubrutinib1615368: Inhibition of human BMX using poly[Glu:Tyr] (4:1) as substrate preincubated for 60 mins followed by [gamma-33P]-ATP addition and measured after 120 mins by filter binding methodic500.0006uM
(E)-2-[(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl]-4-methyl-4-(4-methylpiperazin-1-yl)pent-2-enenitrile1850189: Inhibition of BMX (unknown origin) using peptide substrate in presence of ATP by caliper electrophoresis methodic500.0006uM
2-methyl-N-[2-[3-[[2-(prop-2-enoylamino)acetyl]amino]anilino]pyrimidin-5-yl]-5-[[3-(trifluoromethyl)benzoyl]amino]benzamide1155542: Inhibition of Bmx (unknown origin) after 1 hr by HTRF assayic500.0007uM
5-amino-1-[(3R)-1-cyanopiperidin-3-yl]-3-[4-(2,4-difluorophenoxy)phenyl]pyrazole-4-carboxamide1940004: Inhibition of BMX (unknown origin)ic500.0009uM
Bosutinib1301436: Inhibition of human BMX using poly(Glu,Tyr) 4:1 as substrate after 40 mins by scintillation counting analysis in presence of [gamma-33P-ATP]ic500.0010uM
(E)-2-[(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl]-4-methyl-4-[4-(oxetan-3-yl)piperazin-1-yl]pent-2-enenitrile1850252: Inhibition of BMX (unknown origin) using peptide substrate in presence of ATPic500.0010uM
N-[3-[3-(prop-2-enoylamino)phenyl]-1H-pyrrolo[2,3-b]pyridin-5-yl]thiophene-2-carboxamide1872699: Inhibition of BMX (unknown origin)ic500.0011uM
1-[(3S)-3-[4-amino-3-(2-methyl-4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]prop-2-en-1-one1954478: Inhibition of BMX (unknown origin) by Z’LYTE assayic500.0012uM
(7S)-7-(1-but-2-ynoylpiperidin-4-yl)-2-(4-phenoxyphenyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide1948231: Inhibition of human BMX preincubated for 1 hrs followed by substrate addition and measured after 1 hrs in the presence of ATP at Km concentration by TR-FRET assayic500.0013uM
N-[3-(7-amino-1-methyl-2-oxo-4H-pyrimido[4,5-d]pyrimidin-3-yl)-4-methylphenyl]-3-(trifluoromethyl)benzamide383099: Inhibition of Bmxic500.0014uM
N-(2-chloro-6-methylphenyl)-2-[[6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl]amino]-1,3-thiazole-5-carboxamide;hydrate435781: Binding constant for full-length BMXkd0.0014uM
(7S)-2-(4-phenoxyphenyl)-7-(1-prop-2-enoylpiperidin-4-yl)-3,3a,4,5,6,7-hexahydropyrazolo[1,5-a]pyrimidine-3-carboxamide1871764: Inhibition of BMX (unknown origin)ic500.0014uM
4-[(3S)-3-(but-2-ynoylamino)piperidin-1-yl]-5-fluoro-2,3-dimethyl-1H-indole-7-carboxamide1656253: Inhibition of BMX (unknown origin)ic500.0015uM
(E)-4-(dimethylamino)-N-[7-fluoro-4-(2-methylanilino)imidazo[1,5-a]quinoxalin-8-yl]-N-methylbut-2-enamide629923: Inhibition of BMX relative to controlic500.0015uM
(E)-2-[(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl]-4,4-dimethylpent-2-enenitrile1850189: Inhibition of BMX (unknown origin) using peptide substrate in presence of ATP by caliper electrophoresis methodic500.0018uM
2-methyl-N-[2-[3-(prop-2-enoylamino)anilino]pyrimidin-5-yl]-5-[[3-(trifluoromethyl)benzoyl]amino]benzamide1155542: Inhibition of Bmx (unknown origin) after 1 hr by HTRF assayic500.0019uM
1-[(3R)-3-[5-(4-phenoxyanilino)-2,6,7,9,11-pentazatricyclo[6.3.1.04,12]dodeca-1,3,5,8(12),9-pentaen-7-yl]pyrrolidin-1-yl]prop-2-en-1-one2001966: Inhibition of BMX (unknown origin) by filter binding methodic500.0025uM
(2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one1715441: Inhibition of human BMX using polyGlu:Tyr as substrate by [gamma-33P]-ATP assayic500.0030uM
4-[3-(ethenylsulfonylamino)-2-methylphenyl]-2,3-dimethyl-1H-indole-7-carboxamide1399232: Inhibition of BMX (unknown origin)ic500.0033uM
N-[(1R,2S)-2-aminocyclohexyl]-4-[6-(1-methylpyrazol-4-yl)pyrazolo[1,5-a]pyrimidin-3-yl]thiophene-2-carboxamide1637055: Inhibition of full-length recombinant human His-tagged BMX expressed in baculovirus expression system by Z’-LYTE assayic500.0035uM
N-(4-ethyl-2-pyridinyl)-4-[6-(prop-2-enoylamino)quinolin-4-yl]oxybenzamide1720523: Inhibition of His-tagged recombinant full length human His-tagged BMX cytoplasmic domain expressed in baculovirus expression system using tyrosine-1 peptide as substrate preincubated for 1 hr in presence of ATP by Z’-LYTE assayic500.0038uM
6-amino-9-[(3R)-1-but-2-ynoylpyrrolidin-3-yl]-7-(4-phenoxyphenyl)purin-8-one1871764: Inhibition of BMX (unknown origin)ic500.0043uM
7-(2-hydroxypropan-2-yl)-4-[2-methyl-3-(prop-2-enoylamino)phenyl]-6,7,8,9-tetrahydro-5H-carbazole-1-carboxamide1399232: Inhibition of BMX (unknown origin)ic500.0052uM
1-(1-prop-2-enoyl-2,3-dihydroindol-6-yl)-9-quinolin-3-ylbenzo[h][1,6]naphthyridin-2-one1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0056uM
4-[3-[(6R,8aS)-1,1-dimethyl-3-oxo-6,7,8,8a-tetrahydro-5H-[1,3]oxazolo[3,4-a]pyridin-6-yl]-8-aminoimidazo[1,5-a]pyrazin-1-yl]-N-[4-(trifluoromethyl)-2-pyridinyl]benzamide1721748: Inhibition of BMX (unknown origin)ic500.0056uM
1-[(3S)-3-[4-amino-3-(2,6-dimethyl-4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]prop-2-en-1-one1954478: Inhibition of BMX (unknown origin) by Z’LYTE assayic500.0057uM
4-(methylamino)-2-[4-methyl-3-(prop-2-enoylamino)anilino]-N-[2-methyl-5-[(3,4,5-trimethoxybenzoyl)amino]phenyl]pyrimidine-5-carboxamide1440723: Irreversible inhibition of inactive state of wild-type full-length recombinant His-tagged BMX phosphorylation (unknown origin) at tyrosine residue expressed in baculovirus infected SF9 cells preincubated for 30 mins followed by ATP addition measured after 20 mins by Western blot analysisec500.0058uM
9-(1-methylpyrazol-4-yl)-1-(1-prop-2-enoyl-2,3-dihydroindol-6-yl)benzo[h][1,6]naphthyridin-2-one1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0067uM
3-chloro-4-[3-(5-chloro-1,3-dioxopyrido[1,2-c]pyrimidin-2-yl)-2-methylphenyl]-7-(2-hydroxypropan-2-yl)-9H-carbazole-1-carboxamide1678394: Inhibition of BMX (unknown origin)ic500.0070uM
N-[2-methyl-5-[2-oxo-9-(1H-pyrazol-4-yl)benzo[h][1,6]naphthyridin-1-yl]phenyl]prop-2-enamide1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0074uM
N-[4-methyl-3-[1-methyl-7-[(6-methyl-3-pyridinyl)amino]-2-oxo-4H-pyrimido[4,5-d]pyrimidin-3-yl]phenyl]-3-(trifluoromethyl)benzamide1440720: Inhibition of full-length recombinant human His-tagged BMX expressed in baculovirus expression system using Poly(4:1 Glu, Tyr) as substrate after 1 hr by ADP-Glo kinase assayic500.0080uM
N-[4-methyl-3-[1-methyl-7-[4-methyl-3-(prop-2-enoylamino)anilino]-2-oxo-4H-pyrimido[4,5-d]pyrimidin-3-yl]phenyl]-3-(trifluoromethyl)benzamide1440720: Inhibition of full-length recombinant human His-tagged BMX expressed in baculovirus expression system using Poly(4:1 Glu, Tyr) as substrate after 1 hr by ADP-Glo kinase assayic500.0080uM
N-[5-[9-[4-(methanesulfonamido)phenyl]-2-oxobenzo[h][1,6]naphthyridin-1-yl]-2-methylphenyl]prop-2-enamide1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0080uM
N-[2-methyl-5-[9-(1-methylpyrazol-4-yl)-2-oxobenzo[h][1,6]naphthyridin-1-yl]phenyl]prop-2-enamide1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0082uM
2-[3-[2-amino-6-[1-(oxetan-3-yl)-3,6-dihydro-2H-pyridin-4-yl]-7H-pyrrolo[2,3-d]pyrimidin-4-yl]-2-(hydroxymethyl)phenyl]-6-cyclopropyl-8-fluoroisoquinolin-1-one1830223: Inhibition of human full-length BMX (1 to 675 residues) expressed in baculovirus expression system by mobility shift assayic500.0085uM
1-(1-prop-2-enoyl-2,3-dihydroindol-6-yl)-9-(1H-pyrazol-4-yl)benzo[h][1,6]naphthyridin-2-one1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0088uM
(Z)-2-[(2R)-2-[[4-amino-3-(2-fluoro-4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]methyl]pyrrolidine-1-carbonyl]-4-methyl-4-morpholin-4-ylpent-2-enenitrile1850189: Inhibition of BMX (unknown origin) using peptide substrate in presence of ATP by caliper electrophoresis methodic500.0101uM
N-[3-[2-oxo-9-(1H-pyrazol-4-yl)benzo[h][1,6]naphthyridin-1-yl]phenyl]prop-2-enamide1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0105uM
4-[8-amino-3-[(3R,6S)-1-(cyclopropanecarbonyl)-6-methylpiperidin-3-yl]imidazo[1,5-a]pyrazin-1-yl]-3-fluoro-N-[4-(trifluoromethyl)-2-pyridinyl]benzamide1711654: Inhibition of human BMXic500.0110uM
4-[8-amino-3-[(6R,8aS)-3-oxo-2,5,6,7,8,8a-hexahydro-1H-indolizin-6-yl]imidazo[1,5-a]pyrazin-1-yl]-N-[4-(trifluoromethyl)-2-pyridinyl]benzamide1721748: Inhibition of BMX (unknown origin)ic500.0110uM
3-amino-5-[4-[[4-(4-chlorophenyl)-2-pyridinyl]carbamoyl]phenyl]-2-[(2S)-1-prop-2-enoylpiperidin-2-yl]imidazole-4-carboxamide1781997: Inhibition of full-length N-terminal GST-tagged BMX (1 to 675 residues) (unknown origin) expressed in Sf21 insect cells using NH2-ETVYSEVRK-biotin as substrate preincubated for 1 hr followed by ATP addition and measured after 2 hrs by ELISAic500.0113uM
4-[7-methoxy-6-(5-morpholin-4-ylpent-2-ynoylamino)quinolin-4-yl]oxy-N-pyridin-2-ylbenzamide1720523: Inhibition of His-tagged recombinant full length human His-tagged BMX cytoplasmic domain expressed in baculovirus expression system using tyrosine-1 peptide as substrate preincubated for 1 hr in presence of ATP by Z’-LYTE assayic500.0120uM
N-[5-[9-(furan-3-yl)-2-oxobenzo[h][1,6]naphthyridin-1-yl]-2-methylphenyl]prop-2-enamide1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0121uM
N-[5-[9-(6-amino-3-pyridinyl)-2-oxobenzo[h][1,6]naphthyridin-1-yl]-2-methylphenyl]prop-2-enamide1499223: Inhibition of recombinant full length His-tagged human BMX expressed in baculovirus expression system using poly (4:1 Glu, Tyr) as substrate preincubated for 1 hr followed by substrate addition measured after 1 hr by ADP-glo assayic500.0129uM
2,3-dimethyl-4-[2-methyl-3-(prop-2-enoylamino)phenyl]-1H-indole-7-carboxamide1399232: Inhibition of BMX (unknown origin)ic500.0130uM
4-[8-amino-3-[(6R,8aS)-3-oxo-1,5,6,7,8,8a-hexahydro-[1,3]oxazolo[3,4-a]pyridin-6-yl]imidazo[1,5-a]pyrazin-1-yl]-N-[4-(trifluoromethyl)-2-pyridinyl]benzamide1721748: Inhibition of BMX (unknown origin)ic500.0130uM

CTD chemical–gene interactions

23 total (human), top 23 by PubMed support.

ChemicalActions (top 5)PubMed papers
cobaltous chloridedecreases expression1
epigallocatechin gallateincreases expression1
CGP 52608affects binding, increases reaction1
ponatinibdecreases activity1
Norethindrone Acetateaffects cotreatment, increases expression1
Acetaminophendecreases expression1
Cadmiumincreases abundance, increases expression1
Copperaffects binding, increases expression1
Doxorubicinaffects response to substance1
Estradiolaffects cotreatment, increases expression1
Omeprazoleaffects reaction, increases activity1
Tetrachlorodibenzodioxinincreases expression1
Thiosemicarbazonesaffects binding, increases expression1
Tobacco Smoke Pollutionincreases expression1
Tretinoinincreases expression1
Valproic Aciddecreases methylation1
Vanadiumdecreases expression1
Cyclosporineincreases methylation1
Antirheumatic Agentsincreases expression1
Cadmium Chlorideincreases abundance, increases expression1
Copper Sulfateincreases expression1
Nanotubes, Carbondecreases expression1
Coal Ashdecreases expression1

ChEMBL screening assays

504 unique, capped per target: 488 binding, 11 functional, 5 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1006344BindingInhibition of Tel-fused Bmx kinase-mediated mouse BaF3 cell proliferationIdentification of NVP-TAE684, a potent, selective, and efficacious inhibitor of NPM-ALK. — Proc Natl Acad Sci U S A
CHEMBL1963769FunctionalPUBCHEM_BIOASSAY: Navigating the Kinome. (Class of assay: other) Panel member name: BMXPubChem BioAssay data set
CHEMBL4023729ADMETInhibition of cytoplasmic recombinant human full length His-tagged BMX expressed in baculovirus at 1 uM by Z’-LYTE assayDiscovery of GDC-0853: A Potent, Selective, and Noncovalent Bruton’s Tyrosine Kinase Inhibitor in Early Clinical Development. — J Med Chem

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.