BRSK2
gene geneOn this page
Also known as PEN11BSAD-A
Summary
BRSK2 (BR serine/threonine kinase 2, HGNC:11405) is a protein-coding gene on chromosome 11p15.5, encoding Serine/threonine-protein kinase BRSK2 (Q8IWQ3). Serine/threonine-protein kinase that plays a key role in polarization of neurons and axonogenesis, cell cycle progress and insulin secretion. It is haploinsufficient (ClinGen: sufficient evidence).
Enables several functions, including ATP binding activity; ATPase binding activity; and magnesium ion binding activity. Involved in several processes, including G2/M transition of mitotic cell cycle; intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress; and regulation of insulin secretion involved in cellular response to glucose stimulus. Located in centrosome and endoplasmic reticulum.
Source: NCBI Gene 9024 — RefSeq curated summary.
At a glance
- Gene–disease (curated): complex neurodevelopmental disorder (Definitive, ClinGen) — +2 more curated relationships
- GWAS associations: 5
- Clinical variants (ClinVar): 311 total — 8 pathogenic, 16 likely-pathogenic
- Druggable target: yes — 10 molecules with ChEMBL bioactivity
- Dosage sensitivity (ClinGen): haploinsufficiency sufficient evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_001256627
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11405 |
| Approved symbol | BRSK2 |
| Name | BR serine/threonine kinase 2 |
| Location | 11p15.5 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | PEN11B, SAD-A |
| Ensembl gene | ENSG00000174672 |
| Ensembl biotype | protein_coding |
| OMIM | 609236 |
| Entrez | 9024 |
Gene structure
Transcript identifiers
Ensembl transcripts: 20 — 15 protein_coding, 3 retained_intron, 2 nonsense_mediated_decay
ENST00000308219, ENST00000382179, ENST00000524702, ENST00000526678, ENST00000526768, ENST00000528596, ENST00000528710, ENST00000528841, ENST00000529433, ENST00000529951, ENST00000531078, ENST00000531197, ENST00000531932, ENST00000533606, ENST00000544817, ENST00000938455, ENST00000938456, ENST00000938457, ENST00000949451, ENST00000949452
RefSeq mRNA: 5 — MANE Select: NM_001256627
NM_001256627, NM_001256629, NM_001256630, NM_001282218, NM_003957
CCDS: CCDS41590, CCDS58106, CCDS58107, CCDS58108, CCDS60696
Canonical transcript exons
ENST00000528841 — 20 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001203908 | 1444971 | 1445002 |
| ENSE00001592587 | 1442490 | 1442606 |
| ENSE00001622778 | 1438306 | 1438391 |
| ENSE00001763723 | 1440788 | 1440928 |
| ENSE00002142660 | 1460500 | 1462689 |
| ENSE00003471042 | 1445571 | 1445668 |
| ENSE00003542341 | 1443335 | 1443403 |
| ENSE00003548562 | 1445757 | 1445907 |
| ENSE00003556788 | 1445294 | 1445458 |
| ENSE00003561621 | 1459192 | 1459239 |
| ENSE00003568018 | 1456348 | 1456528 |
| ENSE00003591053 | 1436040 | 1436134 |
| ENSE00003611850 | 1456598 | 1456687 |
| ENSE00003622645 | 1454485 | 1454608 |
| ENSE00003623051 | 1443489 | 1443635 |
| ENSE00003645716 | 1449776 | 1449836 |
| ENSE00003652755 | 1450587 | 1450794 |
| ENSE00003675061 | 1443106 | 1443139 |
| ENSE00003719762 | 1451371 | 1451419 |
| ENSE00003845628 | 1389934 | 1390375 |
Expression profiles
Bgee: expression breadth ubiquitous, 176 present calls, max score 98.74.
FANTOM5 (CAGE): breadth broad, TPM avg 4.6349 / max 250.0209, expressed in 618 samples.
FANTOM5 promoters (16 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 112444 | 2.1939 | 528 |
| 112446 | 1.1417 | 324 |
| 112445 | 0.3778 | 148 |
| 112457 | 0.2001 | 64 |
| 112458 | 0.1250 | 34 |
| 112447 | 0.1150 | 72 |
| 112448 | 0.1149 | 63 |
| 112453 | 0.0901 | 49 |
| 112449 | 0.0739 | 48 |
| 112451 | 0.0696 | 7 |
Top tissues by expression
293 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right hemisphere of cerebellum | UBERON:0014890 | 98.74 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 98.34 | gold quality |
| cerebellar cortex | UBERON:0002129 | 98.15 | gold quality |
| body of pancreas | UBERON:0001150 | 97.61 | gold quality |
| right frontal lobe | UBERON:0002810 | 97.28 | gold quality |
| ganglionic eminence | UBERON:0004023 | 96.56 | gold quality |
| cortical plate | UBERON:0005343 | 96.45 | gold quality |
| cerebellum | UBERON:0002037 | 95.47 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 94.52 | gold quality |
| cingulate cortex | UBERON:0003027 | 94.51 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 92.97 | gold quality |
| prefrontal cortex | UBERON:0000451 | 92.88 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 92.62 | gold quality |
| nucleus accumbens | UBERON:0001882 | 92.17 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 92.17 | gold quality |
| amygdala | UBERON:0001876 | 91.95 | gold quality |
| caudate nucleus | UBERON:0001873 | 91.67 | gold quality |
| neocortex | UBERON:0001950 | 90.55 | gold quality |
| putamen | UBERON:0001874 | 89.70 | gold quality |
| frontal cortex | UBERON:0001870 | 89.63 | gold quality |
| frontal lobe | UBERON:0016525 | 89.60 | gold quality |
| adenohypophysis | UBERON:0002196 | 89.40 | gold quality |
| sural nerve | UBERON:0015488 | 89.18 | gold quality |
| cerebral cortex | UBERON:0000956 | 89.09 | gold quality |
| telencephalon | UBERON:0001893 | 88.81 | gold quality |
| primary visual cortex | UBERON:0002436 | 88.47 | gold quality |
| forebrain | UBERON:0001890 | 88.28 | gold quality |
| brain | UBERON:0000955 | 88.22 | gold quality |
| central nervous system | UBERON:0001017 | 88.20 | gold quality |
| spinal cord | UBERON:0002240 | 87.95 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 11.51 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): ESR1
miRNA regulators (miRDB)
28 targeting BRSK2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-548AA | 99.96 | 70.64 | 3753 |
| HSA-MIR-548AP-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-548T-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-3140-3P | 99.88 | 68.47 | 2069 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-4677-5P | 99.70 | 70.09 | 1940 |
| HSA-MIR-6883-5P | 99.69 | 68.05 | 3785 |
| HSA-MIR-1284 | 99.67 | 73.56 | 1353 |
| HSA-MIR-670-5P | 99.67 | 69.94 | 1565 |
| HSA-MIR-561-3P | 99.64 | 70.90 | 3647 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-6739-3P | 99.22 | 68.84 | 1843 |
| HSA-MIR-4293 | 99.22 | 65.46 | 1263 |
| HSA-MIR-1909-3P | 99.03 | 66.56 | 1662 |
| HSA-MIR-3135B | 98.61 | 65.33 | 1470 |
| HSA-MIR-6776-3P | 98.38 | 66.34 | 655 |
| HSA-MIR-4669 | 97.94 | 62.71 | 224 |
| HSA-MIR-4632-3P | 96.26 | 58.52 | 123 |
| HSA-MIR-4485-5P | 95.91 | 59.69 | 198 |
| HSA-MIR-2861 | 95.24 | 65.47 | 1056 |
| HSA-MIR-4445-3P | 93.28 | 66.18 | 106 |
| HSA-MIR-548AL | 93.28 | 65.60 | 109 |
Functional genomics
ClinGen dosage: haploinsufficiency 3 (sufficient evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 16)
- BRSK2 may be an autoantigen involved in the pathogenesis of small-cell lung cancer-associated limbic encephalitis. (PMID:16165222)
- we identified cAMP-dependent protein kinase A (PKA) as another upstream kinase of BRSK2, which can phosphorylate BRSK2 at Thr260. Kinase activity of BRSK2 can be increased through phosphorylation by PKA. (PMID:16870137)
- protein phosphatase 2C is a likely candidate for catalyzing the dephosphorylation and inactivation of BRSK1/2. (PMID:18339622)
- level of SAD within neurons is modulated by TORC1 (PMID:18794342)
- STRADalpha.MO25alpha complexes containing LKB1 variants were equally effective at phosphorylating and activating AMPK, BRSK1, and BRSK2 (PMID:18854318)
- BRSK2 is up-regulated in pancreatic ductal adenocarcinoma. (PMID:20646422)
- these findings provide a novel regulatory mechanism of BRSK2 through direct interaction with Jab1. (PMID:22609399)
- these findings demonstrate ER stress may reduce BRSK2 protein and change BRSK2 subcellular localization, which in turn alleviate ER stress-induced apoptosis. (PMID:22713462)
- a novel function of BRSK2 in the regulation of GSIS in beta-cells via a PCTAIRE1-dependent mechanism and suggest that BRSK2 is an attractive target for developing novel diabetic drugs. (PMID:22798068)
- Anaphase-promoting complex/cyclosome-Cdh1, rather than Cdc20, promotes the degradation of BRSK2 in vivo. (PMID:23029325)
- BRSK2 interacted with VCP/p97 via three of the four functional domains of VCP/p97. Immunofluorescence demonstrated that BRSK2 and VCP/p97 were co-localized and also that knockdown of endogenous BRSK2 induced increased levels of CD3delta. (PMID:23907667)
- SAD-A and AMPK kinases are regulators of mTORC1 signaling in the pancreatic beta-cells. (PMID:24047693)
- the intrinsic molecular merit that BRSK2 provides is a survival advantage to PDAC cells and strengthens the invasiveness of these neoplastic cells in energy-deprived environments. (PMID:28591720)
- damaging variation in BRSK2 is a source of neurodevelopmental disease (PMID:30879638)
- STK39 is a novel kinase contributing to the progression of hepatocellular carcinoma by the PLK1/ERK signaling pathway. (PMID:33500714)
- BRSK2 in pancreatic beta cells promotes hyperinsulinemia-coupled insulin resistance and its genetic variants are associated with human type 2 diabetes. (PMID:37188647)
Cross-species orthologs
12 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | BRSK2 | ENSDARG00000061421 |
| danio_rerio | brsk2b | ENSDARG00000077791 |
| mus_musculus | Brsk2 | ENSMUSG00000053046 |
| rattus_norvegicus | Brsk2 | ENSRNOG00000020021 |
| drosophila_melanogaster | Snrk | FBGN0033915 |
| drosophila_melanogaster | sff | FBGN0036544 |
| drosophila_melanogaster | Nuak | FBGN0262617 |
| caenorhabditis_elegans | WBGENE00004719 | |
| caenorhabditis_elegans | WBGENE00012638 | |
| caenorhabditis_elegans | ZK524.4 | WBGENE00013994 |
| caenorhabditis_elegans | tag-344 | WBGENE00015230 |
| caenorhabditis_elegans | WBGENE00044388 |
Paralogs (17): NUAK1 (ENSG00000074590), PRKAA1 (ENSG00000132356), TSSK4 (ENSG00000139908), HUNK (ENSG00000142149), SIK1 (ENSG00000142178), BRSK1 (ENSG00000160469), SIK3 (ENSG00000160584), PRKAA2 (ENSG00000162409), TSSK3 (ENSG00000162526), NUAK2 (ENSG00000163545), SNRK (ENSG00000163788), MELK (ENSG00000165304), SIK2 (ENSG00000170145), NIM1K (ENSG00000177453), TSSK6 (ENSG00000178093), TSSK2 (ENSG00000206203), TSSK1B (ENSG00000212122)
Protein
Protein identifiers
Serine/threonine-protein kinase BRSK2 — Q8IWQ3 (reviewed: Q8IWQ3)
Alternative names: Brain-selective kinase 2, Brain-specific serine/threonine-protein kinase 2, Serine/threonine-protein kinase 29, Serine/threonine-protein kinase SAD-A
All UniProt accessions (7): A0A0C4DGH9, A0A140VJF6, E9PPI2, E9PRY3, Q8IWQ3, H0YCS6, H0YES6
UniProt curated annotations — full annotation on UniProt →
Function. Serine/threonine-protein kinase that plays a key role in polarization of neurons and axonogenesis, cell cycle progress and insulin secretion. Phosphorylates CDK16, CDC25C, MAPT/TAU, PAK1 and WEE1. Following phosphorylation and activation by STK11/LKB1, acts as a key regulator of polarization of cortical neurons, probably by mediating phosphorylation of microtubule-associated proteins such as MAPT/TAU at ‘Thr-529’ and ‘Ser-579’. Also regulates neuron polarization by mediating phosphorylation of WEE1 at ‘Ser-642’ in postmitotic neurons, leading to down-regulate WEE1 activity in polarized neurons. Plays a role in the regulation of the mitotic cell cycle progress and the onset of mitosis. Plays a role in the regulation of insulin secretion in response to elevated glucose levels, probably via phosphorylation of CDK16 and PAK1. While BRSK2 phosphorylated at Thr-174 can inhibit insulin secretion, BRSK2 phosphorylated at Thr-260 can promote insulin secretion. Regulates reorganization of the actin cytoskeleton. May play a role in the apoptotic response triggered by endoplasmic reticulum (ER) stress.
Subunit / interactions. Interacts with FZR1, a regulatory subunit of the APC ubiquitin ligase complex. Interacts with COPS5. Interacts with PAK1.
Subcellular location. Cytoplasm. Cytoskeleton. Microtubule organizing center. Centrosome. Perinuclear region. Endoplasmic reticulum.
Tissue specificity. Detected in pancreas islets (at protein level).
Post-translational modifications. Phosphorylated at Thr-174 by STK11/LKB1 in complex with STE20-related adapter-alpha (STRADA) pseudo kinase and CAB39. Not phosphorylated at Thr-174 by CaMKK2. In contrast, it is phosphorylated and activated by CaMKK1. May be inactivated via dephosphorylation of Thr-174 by PP2C. Phosphorylated at Thr-260 by PKA. Phosphorylation at Thr-260 by PKA was not observed in another study, but this may reflect differences in the experimental approach. Phosphorylation at Thr-260 seems to play a role in the regulation of insulin secretion. Polyubiquitinated by the APC complex in conjunction with FZR1, leading to its proteasomal degradation. Targeted for proteasomal degradation by interaction with COPS5. BRSK2 levels change during the cell cycle. BRSK2 levels are low at the G1/S boundary and gradually increase as cells progress into G2 phase. BRSK2 levels decrease rapidly at the end of mitosis.
Activity regulation. Activated by phosphorylation on Thr-174 by STK11/LKB1.
Domain organisation. The KEN box motif is required for interaction with FZR1/CDH1 and essential for APC(CDH1)-mediated ubiquitination.
Similarity. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. SNF1 subfamily.
Isoforms (6)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8IWQ3-1 | 1 | yes |
| Q8IWQ3-2 | 2 | |
| Q8IWQ3-3 | 3 | |
| Q8IWQ3-4 | 4 | |
| Q8IWQ3-5 | 5 | |
| Q8IWQ3-6 | 6 |
RefSeq proteins (5): NP_001243556, NP_001243558, NP_001243559, NP_001269147, NP_003948 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR048622 | BRSK1_2-like_UBA | Domain |
Pfam: PF00069, PF21115, PF21122
Catalyzed reactions (Rhea), 4 shown:
- L-seryl-[tau protein] + ATP = O-phospho-L-seryl-[tau protein] + ADP + H(+) (RHEA:12801)
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
- L-threonyl-[tau protein] + ATP = O-phospho-L-threonyl-[tau protein] + ADP + H(+) (RHEA:53904)
UniProt features (47 total): modified residue 17, splice variant 8, mutagenesis site 6, compositionally biased region 4, region of interest 3, domain 2, binding site 2, sequence conflict 2, chain 1, active site 1, short sequence motif 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8IWQ3-F1 | 68.46 | 0.31 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 141 (proton acceptor)
Ligand- & substrate-binding residues (2): 25–33; 48
Post-translational modifications (17): 174, 260, 294, 367, 382, 393, 412, 423, 427, 455, 459, 463, 509, 512, 513, 520, 416
Mutagenesis-validated functional residues (6):
| Position | Phenotype |
|---|---|
| 48 | loss of catalytic activity. causes disintegration of actin stress fibers. |
| 174 | prevents phosphorylation and activation by stk11/lkb1 complex. |
| 174 | constitutively activated. |
| 260 | decreased phosphorylation. nearly abolishes stimulation of insulin secretion. |
| 310 | decreased activation of kinase activity. |
| 443 | constitutively activated. promotes formation of actin stress fibers. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 0 (showing top):
GO Biological Process (20): G2/M transition of mitotic cell cycle (GO:0000086), protein phosphorylation (GO:0006468), exocytosis (GO:0006887), axonogenesis (GO:0007409), regulation of neuron projection development (GO:0010975), central nervous system neuron differentiation (GO:0021953), establishment of cell polarity (GO:0030010), actin cytoskeleton organization (GO:0030036), neuron differentiation (GO:0030182), ERAD pathway (GO:0036503), regulation of axonogenesis (GO:0050770), cell division (GO:0051301), regulation of insulin secretion involved in cellular response to glucose stimulus (GO:0061178), intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (GO:0070059), microtubule cytoskeleton organization involved in establishment of planar polarity (GO:0090176), regulation of retrograde protein transport, ER to cytosol (GO:1904152), regulation of synaptic vesicle clustering (GO:2000807), apoptotic process (GO:0006915), nervous system development (GO:0007399), neuron projection morphogenesis (GO:0048812)
GO Molecular Function (15): magnesium ion binding (GO:0000287), protein serine/threonine kinase activity (GO:0004674), ATP binding (GO:0005524), protein kinase binding (GO:0019901), tau protein binding (GO:0048156), tau-protein kinase activity (GO:0050321), ATPase binding (GO:0051117), ATPase regulator activity (GO:0060590), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740), metal ion binding (GO:0046872)
GO Cellular Component (6): cytoplasm (GO:0005737), endoplasmic reticulum (GO:0005783), centrosome (GO:0005813), perinuclear region of cytoplasm (GO:0048471), distal axon (GO:0150034), cytoskeleton (GO:0005856)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| neuron projection development | 2 |
| response to endoplasmic reticulum stress | 2 |
| protein kinase activity | 2 |
| cytoplasm | 2 |
| mitotic cell cycle | 1 |
| mitotic cell cycle phase transition | 1 |
| cell cycle G2/M phase transition | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| vesicle-mediated transport | 1 |
| secretion by cell | 1 |
| vesicle fusion to plasma membrane | 1 |
| cell morphogenesis involved in neuron differentiation | 1 |
| neuron projection morphogenesis | 1 |
| axon development | 1 |
| regulation of plasma membrane bounded cell projection organization | 1 |
| central nervous system development | 1 |
| neuron differentiation | 1 |
| establishment or maintenance of cell polarity | 1 |
| cytoskeleton organization | 1 |
| actin filament-based process | 1 |
| cell differentiation | 1 |
| generation of neurons | 1 |
| proteasomal protein catabolic process | 1 |
| response to chemical | 1 |
| axonogenesis | 1 |
| regulation of neuron projection development | 1 |
| regulation of anatomical structure morphogenesis | 1 |
| cellular process | 1 |
| insulin secretion involved in cellular response to glucose stimulus | 1 |
| regulation of insulin secretion | 1 |
| regulation of cellular localization | 1 |
| intrinsic apoptotic signaling pathway | 1 |
| microtubule cytoskeleton organization | 1 |
| establishment of planar polarity | 1 |
| retrograde protein transport, ER to cytosol | 1 |
| regulation of protein exit from endoplasmic reticulum | 1 |
| regulation of localization | 1 |
| synaptic vesicle clustering | 1 |
Protein interactions and networks
STRING
1840 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| BRSK2 | CDR2 | Q01850 | 571 |
| BRSK2 | TSC2 | P49815 | 563 |
| BRSK2 | TSC1 | Q92574 | 552 |
| BRSK2 | CDC25B | P30305 | 534 |
| BRSK2 | MTOR | P42345 | 505 |
| BRSK2 | PKD1 | P98161 | 497 |
| BRSK2 | FBXW5 | Q969U6 | 497 |
| BRSK2 | GOLGB1 | Q14789 | 496 |
| BRSK2 | CAB39 | Q9Y376 | 480 |
| BRSK2 | AK5 | Q9Y6K8 | 465 |
| BRSK2 | RAB5A | P20339 | 450 |
| BRSK2 | EIF4EBP1 | Q13541 | 450 |
| BRSK2 | CDC25C | P30307 | 440 |
| BRSK2 | RHEB | Q15382 | 438 |
| BRSK2 | YWHAB | P31946 | 423 |
IntAct
15 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| COPS5 | BRSK2 | psi-mi:“MI:0915”(physical association) | 0.640 |
| COPS5 | BRSK2 | psi-mi:“MI:0403”(colocalization) | 0.640 |
| BRSK2 | YWHAE | psi-mi:“MI:0915”(physical association) | 0.400 |
| SFN | BRSK2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Rrbp1 | PIPSL | psi-mi:“MI:0914”(association) | 0.350 |
| BRSK2 | COL1A1 | psi-mi:“MI:0914”(association) | 0.350 |
| BRSK1 | ANKRD28 | psi-mi:“MI:0914”(association) | 0.350 |
| KBTBD7 | POLRMT | psi-mi:“MI:0914”(association) | 0.350 |
| S100A2 | PLEKHG3 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (63): COPS5 (Reconstituted Complex), BRSK2 (Affinity Capture-MS), BRSK2 (Affinity Capture-RNA), MAPT (Biochemical Activity), TRAF6 (Two-hybrid), BRSK2 (Affinity Capture-MS), BRSK2 (Affinity Capture-RNA), BRSK2 (Affinity Capture-MS), BRSK2 (Proximity Label-MS), BRSK2 (Affinity Capture-MS), BRSK2 (Affinity Capture-MS), BRSK2 (Affinity Capture-MS), COL1A1 (Affinity Capture-MS), B2M (Affinity Capture-MS), CRAMP1L (Affinity Capture-MS)
ESM2 similar proteins: A0A8I3NFE2, A0FI79, B1AVH7, B5DFA1, D2H0G5, D7PF45, O00750, O15357, O70143, P29353, P97573, P98083, Q00IB7, Q0IIE2, Q15678, Q16825, Q17R13, Q2I6J0, Q2I6J1, Q2V2M9, Q5JV73, Q5M824, Q5R7W7, Q5U2X5, Q61120, Q62130, Q62136, Q62728, Q62925, Q69Z98, Q6P4S2, Q6P549, Q80TI1, Q8AY68, Q8BMC3, Q8BYW1, Q8IWQ3, Q8K245, Q92529, Q92835
Diamond homologs: A0AUV4, A1A5Q6, A2KF29, A2XFF4, A8WYE4, B2DD29, B8BBT7, C0HKC8, C0HKC9, F1QGZ6, O08678, O08679, O22932, O74536, O94168, P06782, P0DP15, P25389, P27448, P45894, P52497, P54645, P54646, P57059, P92958, Q00372, Q02723, Q03141, Q05512, Q09137, Q0D4B2, Q12152, Q12263, Q13131, Q14680, Q19469, Q21017, Q28948, Q28GW8, Q2RAX3
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| STK11 | up-regulates | BRSK2 | phosphorylation |
| BRSK2 | up-regulates | PRKAA1 | phosphorylation |
| BRSK2 | “up-regulates activity” | WDR45 | phosphorylation |
| PKA | “up-regulates activity” | BRSK2 | phosphorylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
311 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 8 |
| Likely pathogenic | 16 |
| Uncertain significance | 157 |
| Likely benign | 96 |
| Benign | 13 |
Top pathogenic / likely-pathogenic (24)
| Variant ID | HGVS | Classification |
|---|---|---|
| 2285811 | NM_001256627.2(BRSK2):c.978-1G>C | Pathogenic |
| 2299730 | NM_001256627.2(BRSK2):c.1301_1307dup (p.Arg437fs) | Pathogenic |
| 3135160 | NM_001256627.2(BRSK2):c.1535C>A (p.Ser512Ter) | Pathogenic |
| 3135165 | NM_001256627.2(BRSK2):c.696_697del (p.Phe233fs) | Pathogenic |
| 3359012 | NM_001256627.2(BRSK2):c.117C>A (p.Cys39Ter) | Pathogenic |
| 4077190 | NM_001256627.2(BRSK2):c.664C>T (p.Arg222Ter) | Pathogenic |
| 487356 | NM_001256627.2(BRSK2):c.530+1G>A | Pathogenic |
| 503810 | NM_001256627.2(BRSK2):c.902_906dup (p.Leu303fs) | Pathogenic |
| 1184934 | NM_001256627.2(BRSK2):c.733_734del (p.Leu246fs) | Likely pathogenic |
| 1201733 | NM_001256627.2(BRSK2):c.1987+2del | Likely pathogenic |
| 1473680 | NM_001256627.2(BRSK2):c.1940-3_1940-2del | Likely pathogenic |
| 2497685 | NM_001256627.2(BRSK2):c.1617A>C (p.Lys539Asn) | Likely pathogenic |
| 2505705 | NM_001256627.2(BRSK2):c.82G>C (p.Gly28Arg) | Likely pathogenic |
| 2577996 | NM_001256627.2(BRSK2):c.818dup (p.Lys274fs) | Likely pathogenic |
| 2626896 | NM_001256627.2(BRSK2):c.1668G>A (p.Ser556=) | Likely pathogenic |
| 2633427 | NM_001256627.2(BRSK2):c.472G>A (p.Ala158Thr) | Likely pathogenic |
| 2691499 | NC_000011.9:g.(1467138_1471005)_(1477918_1480421)del | Likely pathogenic |
| 4077193 | NM_001256627.2(BRSK2):c.186+5_186+50del | Likely pathogenic |
| 4216379 | NM_001256627.2(BRSK2):c.551C>A (p.Pro184His) | Likely pathogenic |
| 4293685 | NM_001256627.2(BRSK2):c.1959_1966dup (p.Thr656delinsLysTer) | Likely pathogenic |
| 431482 | NM_001256627.2(BRSK2):c.1532_1533del (p.Glu511fs) | Likely pathogenic |
| 4536112 | NC_000011.9:g.(1462159_1463719)_(1464370_1464564)del | Likely pathogenic |
| 4813882 | NM_001256627.2(BRSK2):c.1940-2A>C | Likely pathogenic |
| 517145 | NM_001256627.2(BRSK2):c.635G>A (p.Gly212Glu) | Likely pathogenic |
SpliceAI
5106 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:1438392:G:GG | donor_gain | 1.0000 |
| 11:1440784:GCAG:G | acceptor_loss | 1.0000 |
| 11:1440786:AGG:A | acceptor_loss | 1.0000 |
| 11:1440925:TATG:T | donor_gain | 1.0000 |
| 11:1440926:ATG:A | donor_gain | 1.0000 |
| 11:1440926:ATGGT:A | donor_loss | 1.0000 |
| 11:1440929:G:GG | donor_gain | 1.0000 |
| 11:1440929:GT:G | donor_loss | 1.0000 |
| 11:1442484:CCCCA:C | acceptor_loss | 1.0000 |
| 11:1442485:CCCAG:C | acceptor_loss | 1.0000 |
| 11:1442486:CCA:C | acceptor_loss | 1.0000 |
| 11:1442487:CA:C | acceptor_loss | 1.0000 |
| 11:1442488:A:AG | acceptor_gain | 1.0000 |
| 11:1442489:G:GT | acceptor_gain | 1.0000 |
| 11:1442489:GC:G | acceptor_gain | 1.0000 |
| 11:1442489:GCC:G | acceptor_gain | 1.0000 |
| 11:1442489:GCCA:G | acceptor_gain | 1.0000 |
| 11:1442489:GCCAC:G | acceptor_gain | 1.0000 |
| 11:1442492:ACAGG:A | acceptor_gain | 1.0000 |
| 11:1442600:GCT:G | donor_gain | 1.0000 |
| 11:1442603:GTGG:G | donor_gain | 1.0000 |
| 11:1442605:GG:G | donor_gain | 1.0000 |
| 11:1442606:GG:G | donor_gain | 1.0000 |
| 11:1442607:G:GG | donor_gain | 1.0000 |
| 11:1443486:CA:C | acceptor_loss | 1.0000 |
| 11:1443487:A:AG | acceptor_gain | 1.0000 |
| 11:1443487:AG:A | acceptor_gain | 1.0000 |
| 11:1443487:AGG:A | acceptor_gain | 1.0000 |
| 11:1443487:AGGG:A | acceptor_gain | 1.0000 |
| 11:1443488:G:A | acceptor_loss | 1.0000 |
AlphaMissense
4820 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:1390331:T:A | V16D | 1.000 |
| 11:1390333:G:A | G17R | 1.000 |
| 11:1390333:G:C | G17R | 1.000 |
| 11:1390333:G:T | G17W | 1.000 |
| 11:1390334:G:A | G17E | 1.000 |
| 11:1390339:T:G | Y19D | 1.000 |
| 11:1390358:T:C | L25P | 1.000 |
| 11:1390360:G:A | G26S | 1.000 |
| 11:1390360:G:C | G26R | 1.000 |
| 11:1390360:G:T | G26C | 1.000 |
| 11:1390361:G:A | G26D | 1.000 |
| 11:1390361:G:T | G26V | 1.000 |
| 11:1390366:G:A | G28R | 1.000 |
| 11:1390366:G:C | G28R | 1.000 |
| 11:1390366:G:T | G28W | 1.000 |
| 11:1390367:G:A | G28E | 1.000 |
| 11:1390367:G:C | G28A | 1.000 |
| 11:1390367:G:T | G28V | 1.000 |
| 11:1390373:C:T | T30I | 1.000 |
| 11:1390375:G:C | G31R | 1.000 |
| 11:1390375:G:T | G31C | 1.000 |
| 11:1436040:G:A | G31D | 1.000 |
| 11:1436040:G:T | G31V | 1.000 |
| 11:1436043:T:C | L32P | 1.000 |
| 11:1436045:G:A | V33M | 1.000 |
| 11:1436046:T:A | V33E | 1.000 |
| 11:1436046:T:C | V33A | 1.000 |
| 11:1436048:A:G | K34E | 1.000 |
| 11:1436050:G:C | K34N | 1.000 |
| 11:1436050:G:T | K34N | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000030983 (11:1393275 C>T), RS1000103324 (11:1443001 A>G), RS1000201312 (11:1396200 C>T), RS1000209858 (11:1416727 G>A), RS1000211975 (11:1459359 C>G,T), RS1000253517 (11:1396314 C>G,T), RS1000272644 (11:1399974 C>T), RS1000311695 (11:1390873 G>T), RS1000317768 (11:1463081 G>A,T), RS1000322334 (11:1455907 G>C), RS1000324807 (11:1449576 G>T), RS1000376767 (11:1406551 G>A,T), RS1000447690 (11:1425872 T>A,C), RS1000499312 (11:1404293 C>T), RS1000531021 (11:1460052 C>A,T)
Disease associations
OMIM: gene MIM:609236 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| complex neurodevelopmental disorder | Definitive | Autosomal dominant |
| neurodevelopmental disorder | Strong | Autosomal dominant |
| autosomal dominant non-syndromic intellectual disability | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| complex neurodevelopmental disorder | Definitive | AD |
Mondo (5): breast ductal adenocarcinoma (MONDO:0005590), neurodevelopmental disorder (MONDO:0700092), complex neurodevelopmental disorder (MONDO:0100038), intellectual disability (MONDO:0001071), autosomal dominant non-syndromic intellectual disability (MONDO:0015802)
Orphanet (2): Non-specific syndromic intellectual disability (Orphanet:528084), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
5 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001974_4 | Idiopathic pulmonary fibrosis | 1.000000e-12 |
| GCST001974_5 | Idiopathic pulmonary fibrosis | 3.000000e-11 |
| GCST003878_3 | Heroin dependence | 4.000000e-06 |
| GCST010277_7 | Gout | 4.000000e-07 |
| GCST010703_211 | Brain morphology (MOSTest) | 2.000000e-11 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0000768 | idiopathic pulmonary fibrosis |
| EFO:0004346 | neuroimaging measurement |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D018270 | Carcinoma, Ductal, Breast | C04.557.470.200.025.232.500; C04.557.470.615.132.500; C04.588.180.390; C17.800.090.500.390 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL4574 (SINGLE PROTEIN), CHEMBL6066543 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
10 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 97,617 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL3545311 | BRIGATINIB | 4 | 5,634 |
| CHEMBL535 | SUNITINIB | 4 | 79,020 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL1721885 | SU-014813 | 2 | 363 |
| CHEMBL230011 | TG100-115 | 2 | 1,504 |
| CHEMBL4303241 | BAY-1161909 | 2 | 47 |
| CHEMBL1908394 | GSK-461364 | 1 | 1,093 |
| CHEMBL1908397 | KW-2449 | 1 | 622 |
| CHEMBL296468 | BMS-387032 | 1 | 2,075 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — BRSK subfamily
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| SU6656 | Inhibition | 7.0 | pIC50 |
Binding affinities (BindingDB)
10 measured of 24 human assays (24 total across all organisms); most potent 10 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 1-(4-methoxyphenyl)-7-oxo-6-[4-(2-oxopiperidin-1-yl)phenyl]-1H,4H,5H,6H,7H-pyrazolo[3,4-c]pyridine-3-carboxamide | KI | 0.075 nM | |
| Staurosporine | KD | 1.7 nM | |
| 1-(4-methoxyphenyl)-7-oxo-6-[1-(2-oxopyrrolidin-3-yl)piperidin-4-yl]-4,5-dihydropyrazolo[5,4-c]pyridine-3-carboxamide | KI | 30 nM | US-9938272: Hydrazine compound as blood coagulation factor Xa inhibitor |
| 1-(4-Methoxyphenyl)-N5-(1-(3-oxomorpholino)piperidin-4-yl)-1H-pyrazole-3,5-dicarboxamide | KI | 30 nM | US-9938272: Hydrazine compound as blood coagulation factor Xa inhibitor |
| 3-(7-Oxo-6-(1-(3-oxomorpholino)piperidin-4-yl)-3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-c]pyridin-1-yl)benzamide | KI | 30 nM | US-9938272: Hydrazine compound as blood coagulation factor Xa inhibitor |
| PKC-412 | KD | 190 nM | |
| 7-Oxo-6-(1-(3-oxomorpholino)piperidin-4-yl)-1-(4-(trifluoromethoxy)phenyl)-4,5,6,7-tetr a hydro-1H-pyrazolo[3,4-c]pyridine-3-carboxamide | KI | 525 nM | US-9938272: Hydrazine compound as blood coagulation factor Xa inhibitor |
| 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-[(2S)-3-morpholin-4-yl-2-oxidanyl-propyl]-1H-pyrrole-3-carboxamide | KD | 2600 nM | |
| 1-Acyl-1H-[1,2,4]triazole-3,5-diamine Analogue 3b | KD | 3100 nM | |
| N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | KD | 3500 nM |
ChEMBL bioactivities
36 potent at pChembl≥5 of 37 total, top 26 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.63 | IC50 | 2.33 | nM | STAUROSPORINE |
| 8.48 | IC50 | 3.29 | nM | STAUROSPORINE |
| 8.46 | Kd | 3.5 | nM | STAUROSPORINE |
| 7.80 | Kd | 16 | nM | LESTAURTINIB |
| 7.52 | Ki | 30 | nM | CHEMBL5919505 |
| 7.52 | Ki | 30 | nM | CHEMBL5912703 |
| 7.52 | Ki | 30 | nM | CHEMBL6013950 |
| 7.38 | Kd | 42 | nM | CHEMBL1241674 |
| 7.05 | IC50 | 90 | nM | CHEMBL1231206 |
| 7.04 | Kd | 92 | nM | HESPERADIN |
| 7.00 | IC50 | 100 | nM | CHEMBL605003 |
| 6.90 | IC50 | 125 | nM | BRIGATINIB |
| 6.72 | Kd | 190 | nM | TAE-684 |
| 6.28 | Ki | 525 | nM | CHEMBL5877639 |
| 6.19 | Kd | 650 | nM | MIDOSTAURIN |
| 5.96 | IC50 | 1100 | nM | CHEMBL1240885 |
| 5.96 | Kd | 1100 | nM | SUNITINIB |
| 5.92 | Kd | 1200 | nM | TG100-115 |
| 5.92 | Kd | 1200 | nM | KW-2449 |
| 5.72 | IC50 | 1900 | nM | CHEMBL2207198 |
| 5.57 | Kd | 2700 | nM | JNJ-7706621 |
| 5.43 | IC50 | 3700 | nM | CHEMBL2207208 |
| 5.39 | Kd | 4100 | nM | SU-014813 |
| 5.25 | Kd | 5600 | nM | BMS-387032 |
| 5.08 | Kd | 8300 | nM | GSK-461364 |
| 5.05 | Kd | 8900 | nM | CHEMBL386051 |
PubChem BioAssay actives
30 with measured affinity, of 756 total; 20 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 1531598: Inhibition of human BRSK2 using KKLNRTLSFAEPG as substrate by [gamma-33P]-ATP assay | ic50 | 0.0023 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 507850: Binding affinity to BRSK2 | kd | 0.0160 | uM |
| 2-(4-amino-1-propan-2-ylpyrazolo[3,4-d]pyrimidin-3-yl)-1H-indol-5-ol | 624929: Binding constant for BRSK2 kinase domain | kd | 0.0420 | uM |
| (15R)-15-methyl-5-(6-methyl-3-pyridinyl)-11-thia-6,14,17-triazatetracyclo[8.8.0.02,7.012,18]octadeca-1(10),2(7),3,5,8,12(18)-hexaen-13-one | 2167726: Inhibition of BrSK2 (unknown origin) | ic50 | 0.0900 | uM |
| N-[2-hydroxy-3-[C-phenyl-N-[4-(piperidin-1-ylmethyl)phenyl]carbonimidoyl]-1H-indol-5-yl]ethanesulfonamide | 389048: Binding affinity to human BRSK2 | kd | 0.0920 | uM |
| (3Z)-N,N-dimethyl-2-oxo-3-(4,5,6,7-tetrahydro-1H-indol-2-ylmethylidene)-1H-indole-5-sulfonamide | 436061: Inhibition of BRSK2 in the presence of 50uM ATP | ic50 | 0.1000 | uM |
| Brigatinib | 2182832: Inhibition of human BRSK2 using KKLNRTLSFAEPG as substrate in presence of [gamma33P]-ATP by HotSpot assay | ic50 | 0.1250 | uM |
| 5-chloro-2-N-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-4-N-(2-propan-2-ylsulfonylphenyl)pyrimidine-2,4-diamine | 624929: Binding constant for BRSK2 kinase domain | kd | 0.1900 | uM |
| Midostaurin | 435783: Binding constant for full-length BRSK2 | kd | 0.6500 | uM |
| 3-N-(4-fluorophenyl)-2H-pyrazolo[3,4-d]pyrimidine-3,4-diamine | 436061: Inhibition of BRSK2 in the presence of 50uM ATP | ic50 | 1.1000 | uM |
| Sunitinib | 435783: Binding constant for full-length BRSK2 | kd | 1.1000 | uM |
| 3-[2,4-diamino-7-(3-hydroxyphenyl)pteridin-6-yl]phenol | 624929: Binding constant for BRSK2 kinase domain | kd | 1.2000 | uM |
| [4-[(E)-2-(1H-indazol-3-yl)ethenyl]phenyl]-piperazin-1-ylmethanone | 624929: Binding constant for BRSK2 kinase domain | kd | 1.2000 | uM |
| N-[3-[[5-cyclopropyl-2-(4-morpholin-4-ylanilino)pyrimidin-4-yl]amino]propyl]cyclobutanecarboxamide | 718686: Inhibition of BRSK2 | ic50 | 1.9000 | uM |
| 4-[[5-amino-1-(2,6-difluorobenzoyl)-1,2,4-triazol-3-yl]amino]benzenesulfonamide | 435783: Binding constant for full-length BRSK2 | kd | 2.7000 | uM |
| N-[3-[[5-cyclopropyl-2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]amino]propyl]cyclobutanecarboxamide | 718686: Inhibition of BRSK2 | ic50 | 3.7000 | uM |
| 5-[(Z)-(5-fluoro-2-oxo-1H-indol-3-ylidene)methyl]-N-[(2S)-2-hydroxy-3-morpholin-4-ylpropyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | 435783: Binding constant for full-length BRSK2 | kd | 4.1000 | uM |
| N-[5-[(5-tert-butyl-1,3-oxazol-2-yl)methylsulfanyl]-1,3-thiazol-2-yl]piperidine-4-carboxamide | 624929: Binding constant for BRSK2 kinase domain | kd | 5.6000 | uM |
| 5-[6-[(4-methylpiperazin-1-yl)methyl]benzimidazol-1-yl]-3-[(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy]thiophene-2-carboxamide | 624929: Binding constant for BRSK2 kinase domain | kd | 8.3000 | uM |
| 6-(2,6-dichlorophenyl)-8-methyl-2-(3-methylsulfanylanilino)pyrido[2,3-d]pyrimidin-7-one | 624929: Binding constant for BRSK2 kinase domain | kd | 8.9000 | uM |
CTD chemical–gene interactions
22 total (human), top 22 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Arsenic | increases abundance, increases expression, affects methylation | 2 |
| Benzo(a)pyrene | affects methylation, increases methylation | 2 |
| Valproic Acid | decreases expression, increases methylation | 2 |
| Aflatoxin B1 | increases methylation | 2 |
| mono-(2-ethylhexyl)phthalate | increases expression | 1 |
| sulforaphane | decreases expression | 1 |
| sodium arsenite | increases expression, increases abundance | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| aflatoxin B2 | affects methylation | 1 |
| coumarin | decreases phosphorylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| abrine | decreases expression | 1 |
| bisphenol S | decreases methylation | 1 |
| Sunitinib | increases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Atrazine | decreases expression | 1 |
| Cisplatin | decreases expression | 1 |
| Methapyrilene | increases methylation | 1 |
| Smoke | decreases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Urethane | decreases expression | 1 |
| Cadmium Chloride | decreases expression | 1 |
ChEMBL screening assays
230 unique, capped per target: 230 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1004138 | Binding | Inhibition of BRSK2 at 1 uM relative to control | Novel potent BRAF inhibitors: toward 1 nM compounds through optimization of the central phenyl ring. — J Med Chem |
Cellosaurus cell lines
3 cell lines: 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1LK | Abcam HeLa BRSK2 KO | Cancer cell line | Female |
| CVCL_SF82 | HAP1 BRSK2 (-) 1 | Cancer cell line | Male |
| CVCL_SF83 | HAP1 BRSK2 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
299 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT03414970 | PHASE3 | ACTIVE_NOT_RECRUITING | Hypofractionated Radiation Therapy After Mastectomy in Preventing Recurrence in Patients With Stage IIa-IIIa Breast Cancer |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT00461344 | PHASE2 | TERMINATED | Docetaxel + Doxorubicin as Neoadjuvant Chemotherapy in Patients With Breast Cancer |
| NCT07499999 | PHASE2 | NOT_YET_RECRUITING | Randomized Double-Blind Phase II Trial of Baby Exemestane Versus Baby Tamoxifen in Post-Menopausal Women at High Risk for Breast Cancer |
| NCT02304302 | PHASE2 | COMPLETED | Down Syndrome Memantine Follow-up Study |
| NCT03862950 | PHASE2 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome (Met) |
| NCT04529226 | PHASE2 | UNKNOWN | Study to Compare Clozapine vs Treatment as Usual in People With Intellectual Disability & Treatment-resistant Psychosis |
| NCT04821856 | PHASE2 | COMPLETED | Evaluation of the Effectiveness of Cannabidiol in Treating Severe Behavioural Problems in Children and Adolescents With Intellectual Disability |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
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Related Atlas pages
- Associated diseases: complex neurodevelopmental disorder, autosomal dominant non-syndromic intellectual disability, neurodevelopmental disorder
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal dominant non-syndromic intellectual disability, breast ductal adenocarcinoma, complex neurodevelopmental disorder, gout, heroin dependence, neurodevelopmental disorder