BSN-DT

Summary

BSN-DT (BSN divergent transcript, HGNC:42445) is a long non-coding RNA gene on chromosome 3p21.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42445
Approved symbol	BSN-DT
Name	BSN divergent transcript
Location	3p21.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000226913
Ensembl biotype	lncRNA
Entrez	100132677
RNAcentral	URS00000E4C5C — lncRNA, 2603 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 8 — 8 lncRNA

ENST00000421598, ENST00000433882, ENST00000665395, ENST00000816618, ENST00000816619, ENST00000816620, ENST00000816621, ENST00000816622

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000421598 — 3 exons

Exon	Start	End
ENSE00001730917	49553548	49553687
ENSE00001738181	49549306	49551442
ENSE00001780244	49554041	49554366

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 77.67.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.2443 / max 6.0031, expressed in 107 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
42266	0.2443	107

Top tissues by expression

219 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.67	gold quality
buccal mucosa cell	CL:0002336	77.51	gold quality
colonic epithelium	UBERON:0000397	70.05	silver quality
right testis	UBERON:0004534	68.09	gold quality
left testis	UBERON:0004533	67.53	gold quality
testis	UBERON:0000473	66.00	gold quality
cortical plate	UBERON:0005343	64.10	gold quality
ganglionic eminence	UBERON:0004023	63.31	gold quality
ventricular zone	UBERON:0003053	62.98	gold quality
islet of Langerhans	UBERON:0000006	61.17	gold quality
prefrontal cortex	UBERON:0000451	56.15	gold quality
right hemisphere of cerebellum	UBERON:0014890	55.81	gold quality
cerebellar cortex	UBERON:0002129	55.80	gold quality
cerebellar hemisphere	UBERON:0002245	55.75	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	55.39	gold quality
cerebellum	UBERON:0002037	54.74	gold quality
sperm	CL:0000019	54.37	gold quality
pituitary gland	UBERON:0000007	54.04	gold quality
lower lobe of lung	UBERON:0008949	53.76	silver quality
skin of hip	UBERON:0001554	52.83	silver quality
pancreas	UBERON:0001264	52.49	gold quality
anterior cingulate cortex	UBERON:0009835	52.36	gold quality
Brodmann (1909) area 9	UBERON:0013540	52.27	gold quality
nucleus accumbens	UBERON:0001882	51.95	gold quality
neocortex	UBERON:0001950	51.88	gold quality
adenohypophysis	UBERON:0002196	51.88	gold quality
frontal cortex	UBERON:0001870	51.87	gold quality
hypothalamus	UBERON:0001898	51.73	gold quality
vermiform appendix	UBERON:0001154	51.61	gold quality
caudate nucleus	UBERON:0001873	51.57	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.28

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.