BTBD3-AS1

Summary

BTBD3-AS1 (BTBD3 antisense RNA 1, HGNC:40728) is a long non-coding RNA gene on chromosome 20p12.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40728
Approved symbol	BTBD3-AS1
Name	BTBD3 antisense RNA 1
Location	20p12.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236526
Ensembl biotype	lncRNA
Entrez	121832811
RNAcentral	URS00026A24F6 — lncRNA, 1755 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000439529, ENST00000747207, ENST00000747208

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000439529 — 3 exons

Exon	Start	End
ENSE00001606984	11913314	11913676
ENSE00001651853	11918314	11918677
ENSE00001802502	11909404	11910507

Expression profiles

Bgee: expression breadth ubiquitous, 154 present calls, max score 86.01.

Top tissues by expression

227 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.01	gold quality
adrenal tissue	UBERON:0018303	85.97	gold quality
oviduct epithelium	UBERON:0004804	85.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.88	gold quality
buccal mucosa cell	CL:0002336	70.28	gold quality
corpus callosum	UBERON:0002336	70.19	gold quality
colonic epithelium	UBERON:0000397	68.87	gold quality
fallopian tube	UBERON:0003889	62.08	gold quality
sural nerve	UBERON:0015488	61.83	silver quality
calcaneal tendon	UBERON:0003701	60.77	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.32	gold quality
right adrenal gland cortex	UBERON:0035827	59.08	gold quality
right uterine tube	UBERON:0001302	58.59	gold quality
tonsil	UBERON:0002372	58.41	gold quality
ganglionic eminence	UBERON:0004023	58.36	gold quality
right adrenal gland	UBERON:0001233	58.12	gold quality
adrenal gland	UBERON:0002369	58.09	gold quality
stomach	UBERON:0000945	57.52	gold quality
left adrenal gland cortex	UBERON:0035825	57.08	gold quality
endometrium	UBERON:0001295	56.91	gold quality
stromal cell of endometrium	CL:0002255	56.62	gold quality
body of stomach	UBERON:0001161	56.59	gold quality
left adrenal gland	UBERON:0001234	56.53	gold quality
adrenal cortex	UBERON:0001235	56.51	gold quality
body of pancreas	UBERON:0001150	56.35	gold quality
Brodmann (1909) area 46	UBERON:0006483	55.82	silver quality
pancreas	UBERON:0001264	55.39	gold quality
leukocyte	CL:0000738	55.27	gold quality
monocyte	CL:0000576	55.25	gold quality
right hemisphere of cerebellum	UBERON:0014890	54.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.