C10orf71-AS1

Summary

C10orf71-AS1 (C10orf71 antisense RNA 1, HGNC:45007) is a long non-coding RNA gene on chromosome 10q11.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:45007
Approved symbol	C10orf71-AS1
Name	C10orf71 antisense RNA 1
Location	10q11.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236208
Ensembl biotype	lncRNA
Entrez	100506769
RNAcentral	URS000075B248 — lncRNA, 695 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000437677, ENST00000442700, ENST00000702303

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000437677 — 2 exons

Exon	Start	End
ENSE00004090082	49296112	49296773
ENSE00004090083	49298690	49299081

Expression profiles

Bgee: expression breadth broad, 93 present calls, max score 93.47.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0948 / max 34.6802, expressed in 27 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
109330	0.0948	27

Top tissues by expression

191 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
biceps brachii	UBERON:0001507	93.47	gold quality
vastus lateralis	UBERON:0001379	93.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	92.86	gold quality
quadriceps femoris	UBERON:0001377	92.45	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	91.93	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	90.21	gold quality
skeletal muscle tissue	UBERON:0001134	89.86	gold quality
buccal mucosa cell	CL:0002336	88.10	silver quality
tibialis anterior	UBERON:0001385	84.45	silver quality
apex of heart	UBERON:0002098	84.14	gold quality
muscle of leg	UBERON:0001383	84.13	gold quality
deltoid	UBERON:0001476	84.06	silver quality
gastrocnemius	UBERON:0001388	81.98	gold quality
cardiac muscle of right atrium	UBERON:0003379	80.88	gold quality
heart left ventricle	UBERON:0002084	79.94	gold quality
cardiac ventricle	UBERON:0002082	79.58	gold quality
heart	UBERON:0000948	76.68	gold quality
cardiac atrium	UBERON:0002081	75.04	gold quality
right atrium auricular region	UBERON:0006631	74.99	gold quality
body of tongue	UBERON:0011876	72.28	gold quality
epithelial cell of pancreas	CL:0000083	70.78	gold quality
tendon	UBERON:0000043	70.69	gold quality
kidney epithelium	UBERON:0004819	70.68	gold quality
heart right ventricle	UBERON:0002080	69.02	silver quality
tongue	UBERON:0001723	66.86	gold quality
tendon of biceps brachii	UBERON:0008188	65.99	gold quality
islet of Langerhans	UBERON:0000006	65.41	gold quality
upper arm skin	UBERON:0004263	62.43	gold quality
superior surface of tongue	UBERON:0007371	61.96	silver quality
oviduct epithelium	UBERON:0004804	61.29	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.