C16orf46-AS1

Summary

C16orf46-AS1 (C16orf46 antisense RNA 1, HGNC:58545) is a long non-coding RNA gene on chromosome 16q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58545
Approved symbol	C16orf46-AS1
Name	C16orf46 antisense RNA 1
Location	16q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261838
Ensembl biotype	lncRNA
Entrez	105371361

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000563072, ENST00000568362

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563072 — 2 exons

Exon	Start	End
ENSE00004119098	81071981	81072230
ENSE00004119099	81076424	81076600

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 92.58.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.58	gold quality
placenta	UBERON:0001987	83.11	gold quality
colonic epithelium	UBERON:0000397	77.85	gold quality
ventricular zone	UBERON:0003053	75.95	gold quality
sural nerve	UBERON:0015488	74.35	gold quality
skeletal muscle tissue	UBERON:0001134	67.26	silver quality
leukocyte	CL:0000738	64.05	gold quality
ectocervix	UBERON:0012249	63.20	gold quality
monocyte	CL:0000576	63.17	gold quality
duodenum	UBERON:0002114	63.07	gold quality
islet of Langerhans	UBERON:0000006	62.96	gold quality
endometrium	UBERON:0001295	62.81	gold quality
smooth muscle tissue	UBERON:0001135	61.81	gold quality
lymph node	UBERON:0000029	60.61	gold quality
bone marrow	UBERON:0002371	59.50	gold quality
liver	UBERON:0002107	59.26	gold quality
prefrontal cortex	UBERON:0000451	59.09	gold quality
calcaneal tendon	UBERON:0003701	59.07	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	58.64	gold quality
right lobe of thyroid gland	UBERON:0001119	57.85	gold quality
superior frontal gyrus	UBERON:0002661	57.56	gold quality
muscle of leg	UBERON:0001383	57.20	gold quality
thyroid gland	UBERON:0002046	56.62	gold quality
vermiform appendix	UBERON:0001154	56.50	gold quality
left lobe of thyroid gland	UBERON:0001120	56.43	gold quality
gastrocnemius	UBERON:0001388	56.37	gold quality
adult mammalian kidney	UBERON:0000082	55.80	gold quality
blood	UBERON:0000178	55.67	gold quality
kidney	UBERON:0002113	54.91	gold quality
tonsil	UBERON:0002372	54.67	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.