C1QTNF7-AS1

Summary

C1QTNF7-AS1 (C1QTNF7 antisense RNA 1, HGNC:40683) is a long non-coding RNA gene on chromosome 4p15.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40683
Approved symbol	C1QTNF7-AS1
Name	C1QTNF7 antisense RNA 1
Location	4p15.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249252
Ensembl biotype	lncRNA
Entrez	101929095
RNAcentral	URS000057DECD — lncRNA, 630 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000502344, ENST00000513384, ENST00000515495, ENST00000803075, ENST00000803076, ENST00000803077

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502344 — 6 exons

Exon	Start	End
ENSE00002030831	15263397	15263464
ENSE00002034458	15010493	15010572
ENSE00002037115	15427829	15427914
ENSE00002061018	15006471	15006570
ENSE00002076974	15017802	15017881
ENSE00004231277	15004925	15005157

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 88.58.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0646 / max 17.2597, expressed in 29 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
51439	0.0646	29

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.58	gold quality
descending thoracic aorta	UBERON:0002345	82.29	gold quality
thoracic aorta	UBERON:0001515	81.46	gold quality
ascending aorta	UBERON:0001496	81.45	gold quality
colonic epithelium	UBERON:0000397	80.92	gold quality
corpus callosum	UBERON:0002336	80.84	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.62	silver quality
bone marrow	UBERON:0002371	77.49	gold quality
calcaneal tendon	UBERON:0003701	76.42	gold quality
popliteal artery	UBERON:0002250	76.33	gold quality
tibial artery	UBERON:0007610	76.31	gold quality
bone marrow cell	CL:0002092	73.62	gold quality
mucosa of stomach	UBERON:0001199	70.44	gold quality
left coronary artery	UBERON:0001626	70.30	gold quality
skeletal muscle tissue	UBERON:0001134	70.24	gold quality
cortical plate	UBERON:0005343	69.78	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	69.11	gold quality
skin of abdomen	UBERON:0001416	68.74	gold quality
monocyte	CL:0000576	68.02	gold quality
zone of skin	UBERON:0000014	66.59	gold quality
gall bladder	UBERON:0002110	66.49	gold quality
ectocervix	UBERON:0012249	66.48	gold quality
lower esophagus muscularis layer	UBERON:0035833	66.08	gold quality
urinary bladder	UBERON:0001255	66.07	gold quality
lower esophagus	UBERON:0013473	65.98	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.74	gold quality
subcutaneous adipose tissue	UBERON:0002190	65.69	gold quality
right lung	UBERON:0002167	65.57	gold quality
sural nerve	UBERON:0015488	65.37	silver quality
right coronary artery	UBERON:0001625	65.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.94

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.