C2
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Summary
C2 (complement C2, HGNC:1248) is a protein-coding gene on chromosome 6p21.33, encoding Complement C2 (P06681). Precursor of the catalytic component of the C3 and C5 convertase complexes, which are part of the complement pathway, a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system.
Component C2 is a serum glycoprotein that functions as part of the classical pathway of the complement system. Activated C1 cleaves C2 into C2a and C2b. The serine proteinase C2a then combines with complement factor 4b to create the C3 or C5 convertase. Deficiency of C2 has been reported to associated with certain autoimmune diseases and SNPs in this gene have been associated with altered susceptibility to age-related macular degeneration. This gene localizes within the class III region of the MHC on the short arm of chromosome 6. Alternative splicing results in multiple transcript variants encoding distinct isoforms. Additional transcript variants have been described in publications but their full-length sequence has not been determined.
Source: NCBI Gene 717 — RefSeq curated summary.
At a glance
- Gene–disease (curated): complement component 2 deficiency (Strong, GenCC)
- GWAS associations: 68
- Clinical variants (ClinVar): 513 total — 17 pathogenic, 11 likely-pathogenic
- Phenotypes (HPO): 3
- Druggable target: yes
- MANE Select transcript:
NM_000063
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1248 |
| Approved symbol | C2 |
| Name | complement C2 |
| Location | 6p21.33 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000166278 |
| Ensembl biotype | protein_coding |
| OMIM | 613927 |
| Entrez | 717 |
Gene structure
Transcript identifiers
Ensembl transcripts: 27 — 17 protein_coding, 4 nonsense_mediated_decay, 4 retained_intron, 1 non_stop_decay, 1 protein_coding_CDS_not_defined
ENST00000299367, ENST00000383177, ENST00000411571, ENST00000413154, ENST00000418949, ENST00000442278, ENST00000447952, ENST00000452202, ENST00000452323, ENST00000468407, ENST00000469372, ENST00000482060, ENST00000484636, ENST00000485690, ENST00000486124, ENST00000494905, ENST00000497706, ENST00000695637, ENST00000695638, ENST00000695639, ENST00000695640, ENST00000695644, ENST00000695645, ENST00000695646, ENST00000862556, ENST00000862557, ENST00000862558
RefSeq mRNA: 6 — MANE Select: NM_000063
NM_000063, NM_001145903, NM_001178063, NM_001282457, NM_001282458, NM_001282459
CCDS: CCDS4728, CCDS54991, CCDS56416, CCDS75427, CCDS75428
Canonical transcript exons
ENST00000299367 — 18 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001863951 | 31927717 | 31927798 |
| ENSE00003465506 | 31939231 | 31939320 |
| ENSE00003510154 | 31933610 | 31933783 |
| ENSE00003526031 | 31934166 | 31934299 |
| ENSE00003542442 | 31935923 | 31936061 |
| ENSE00003542622 | 31933867 | 31933965 |
| ENSE00003555157 | 31945178 | 31945672 |
| ENSE00003624113 | 31942959 | 31943099 |
| ENSE00003625758 | 31943644 | 31943809 |
| ENSE00003641559 | 31944980 | 31945029 |
| ENSE00003646481 | 31943917 | 31943993 |
| ENSE00003649345 | 31943416 | 31943527 |
| ENSE00003674113 | 31943225 | 31943319 |
| ENSE00003677538 | 31937319 | 31937459 |
| ENSE00003681952 | 31944135 | 31944226 |
| ENSE00003788330 | 31944727 | 31944853 |
| ENSE00003964557 | 31927955 | 31928164 |
| ENSE00003964559 | 31928732 | 31928917 |
Expression profiles
Bgee: expression breadth ubiquitous, 138 present calls, max score 99.21.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 10.7629 / max 761.6776, expressed in 1499 samples.
FANTOM5 promoters (9 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 67090 | 6.4129 | 589 |
| 67080 | 2.8402 | 1182 |
| 67084 | 0.6145 | 43 |
| 67087 | 0.4840 | 147 |
| 67088 | 0.2412 | 76 |
| 67085 | 0.0734 | 12 |
| 67083 | 0.0469 | 12 |
| 67086 | 0.0346 | 11 |
| 67082 | 0.0152 | 6 |
Top tissues by expression
139 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| liver | UBERON:0002107 | 99.21 | gold quality |
| right lobe of liver | UBERON:0001114 | 99.17 | gold quality |
| placenta | UBERON:0001987 | 96.35 | gold quality |
| spleen | UBERON:0002106 | 94.06 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 93.51 | gold quality |
| gall bladder | UBERON:0002110 | 92.81 | gold quality |
| vermiform appendix | UBERON:0001154 | 92.07 | gold quality |
| omental fat pad | UBERON:0010414 | 92.01 | gold quality |
| right lung | UBERON:0002167 | 91.96 | gold quality |
| lymph node | UBERON:0000029 | 91.42 | gold quality |
| lung | UBERON:0002048 | 90.50 | gold quality |
| duodenum | UBERON:0002114 | 90.48 | gold quality |
| colonic epithelium | UBERON:0000397 | 90.21 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 89.87 | gold quality |
| small intestine | UBERON:0002108 | 89.72 | gold quality |
| adipose tissue | UBERON:0001013 | 89.05 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 88.15 | gold quality |
| rectum | UBERON:0001052 | 86.79 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 86.64 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 86.64 | gold quality |
| right coronary artery | UBERON:0001625 | 85.43 | gold quality |
| right adrenal gland | UBERON:0001233 | 85.00 | gold quality |
| left adrenal gland | UBERON:0001234 | 84.43 | gold quality |
| urinary bladder | UBERON:0001255 | 84.40 | gold quality |
| monocyte | CL:0000576 | 84.26 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 83.65 | gold quality |
| intestine | UBERON:0000160 | 83.64 | gold quality |
| leukocyte | CL:0000738 | 83.62 | gold quality |
| adrenal gland | UBERON:0002369 | 83.02 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 82.75 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 25.49 |
| E-MTAB-6678 | yes | 10.58 |
| E-HCAD-11 | yes | 7.40 |
| E-MTAB-6142 | no | 8.40 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): NKX2-5, TP53
miRNA regulators (miRDB)
29 targeting C2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6758-5P | 100.00 | 66.21 | 1470 |
| HSA-MIR-6856-5P | 100.00 | 65.47 | 1298 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-4261 | 99.59 | 70.30 | 3415 |
| HSA-MIR-6833-5P | 99.50 | 68.93 | 1161 |
| HSA-MIR-7977 | 98.65 | 66.18 | 2590 |
| HSA-MIR-6831-5P | 98.26 | 67.20 | 990 |
| HSA-MIR-7113-5P | 97.88 | 67.33 | 1735 |
| HSA-MIR-4257 | 97.86 | 68.05 | 1190 |
| HSA-MIR-204-3P | 97.80 | 66.84 | 1656 |
| HSA-MIR-6893-3P | 97.79 | 64.91 | 1238 |
| HSA-MIR-4646-5P | 97.70 | 66.84 | 1692 |
| HSA-MIR-3927-3P | 97.68 | 66.76 | 892 |
| HSA-MIR-512-5P | 97.47 | 66.48 | 591 |
| HSA-MIR-370-3P | 97.09 | 64.92 | 1221 |
| HSA-MIR-582-3P | 96.69 | 67.38 | 1019 |
| HSA-MIR-6753-5P | 94.70 | 64.08 | 470 |
Literature-anchored findings (GeneRIF, showing 38)
- C2 microheterogeneity and histocompatibility antigens Class I were studied in an Austrian population. (PMID:12823772)
- study of the formation of high affinity C5 convertase of the classical pathway of complement (PMID:12878586)
- Mannan-binding lectin activates C3 and the alternative complement pathway without involvement of C2 (PMID:16670774)
- a weaker, independent protective effect exists for complement component 2 in age related macular degeneration. (PMID:17576744)
- C2/CFB significantly influences AMD susceptibility and although accounting for effects at this locus does not dramatically increase the overall accuracy of the genetic risk model, the improvement over the CFH-LOC387715 model is statistically significant (PMID:18493315)
- The SNPs rs3753394 and rs800292 of CFH and rs11200638 of HTRA1 are significantly associated with the risk of PCV (polypoidal choroidal vasculopathy) in Chinese patients. (PMID:18515590)
- These data confirm that the classical pathway is vital for complement-mediated phagocytosis of S. pneumoniae and demonstrate why subjects with a C2 deficiency have a marked increase in susceptibility to S. pneumoniae infections. (PMID:18541650)
- In this study, the association of the IVS10 and R32Q variants in the C2 and BF genes in AMD was replicated. Haplotype analysis indicated association of these variants with AMD in an Australian population. (PMID:18806293)
- Because of the high level of linkage disequilibrium within the extended CC2/CFB region, variation within SKIV2L may exert a functional effect in age-related macular degeneration. (PMID:18806297)
- Study provides insights into the genetic pathogenesis of AMD, and C2 has been shown as one of the five genes independently involved in progression from intermediate disease to advanced disease in which blindness is frequent. (PMID:19015224)
- Upon cleavage by C1s, C2a domains undergo conformational rotation while bound to C4b and the released C2b domains may remain folded together as seen in the intact protein. (PMID:19237749)
- Data show that SNPs, and haplotypes risk trends were consistent with those seen in other population studies for CFH, C3, C2, and CFB. (PMID:19259132)
- Our results do not support any major role of the 4 AMD-associated variants in the risk of developing PCV, but favor a predominant association with the RDBP-SKIV2L variants (PMID:19556007)
- The results of the present study provide an independent validation of the association of rs547154 (C2) and rs641153 (CFB) SNPs with reduced risk of AMD in an Indian cohort. (PMID:19696172)
- The polypoidal choroidal vasculopathy (PCV) phenotype in Caucasian patients is associated with the major alleles/genotypes in the age-related macular degeneration (AMD)-associated loci, suggesting that PCV and AMD are genetically similar. (PMID:20378180)
- These data suggest that patients with C2 deficiency are at increased risk of Streptococcus pyogenes infections. (PMID:20417301)
- This study showed that CFH was more likely to be age-related macular(AMD) susceptibility gene, and none of the other C2, CFB, and C3 genes were associated with AMD in a white population. (PMID:20523265)
- These overall results suggest a lack of strong association with the C2 and C7 gene polymorphisms to the susceptibility of systemic lupus erythematosus in the Malaysian population. (PMID:21881993)
- C2/CFB variants play a protective role in the risk of developing neovascular AMD and PCV in the Japanese. (PMID:22232432)
- In conclusion, the genetic effect of C2, CFB and C3 polymorphisms, which are known to be important for AMD in Caucasian, were not significant in the Korean population. (PMID:22273503)
- Results showed that missense mutations in transmembrane protein 2 p.Ser1254Asn, interferon alpha 2 p.Ala120Thr, its regulator NLR family member X1 p.Arg707Cys, and complement component 2 p.Glu318Asp were associated with chronic hepatitis B. (PMID:22610944)
- This meta-analysis provides evidence for an association between C2/CFB polymorphisms and age-related macular degeneration. (PMID:22869612)
- CFH (RS1061170), C2 (RS547154), OR CFB (RS438999) was not associated with early or late AMD. (PMID:23060141)
- Gene variants in CFH and C2/CFB contribute to age related macular degeneration in the Chinese population. (PMID:23233260)
- ARMS2 and C3 are major contributors to advanced age-related macular degeneration in Mexican patients, while the contributions of CFH, C2, and CFB are minor to those of other populations. (PMID:24453474)
- The rs547154, rs641153, and rs12614 SNPs were not associated with age-related macular degeneration development in Greek patients. (PMID:24519512)
- The C2 and CFB gene variants were shown to be associated with polypoidal CNV. Typical PCV was not associated with variants in these genes. (PMID:24965207)
- Inhibition of c3 convertase activity by hepatitis C virus as an additional lesion in the regulation of complement components. (PMID:24983375)
- our data indicate that C2 rs547154 polymorphism plays a protective role in the development of PCV. (PMID:25732348)
- The rs2844455 A allele of C2 is a risk factor for systemic lupus erythematosus development in a Chinese population, whereas the G allele might be a protective factor. (PMID:26176736)
- Solution Structures of Complement C2 and Its C4 Complexes Propose Pathway-specific Mechanisms for Control and Activation of the Complement Proconvertases. (PMID:27252379)
- Vag8 binding to human C1-inhibitor (C1-inh) interferes with the binding of C1-inh to C1s, C1r and MASP-2, resulting in the release of active proteases that subsequently cleave C2 and C4 away from the bacterial surface. (PMID:28742139)
- Logistic regression analyses showed that six C2 single nucleotide polymorphisms had significant associations with the risk of chronic hepatitis B and chronic hepatitis B-related hepatocellular carcinoma among the Korean subjects. Stepwise analysis revealed that causal markers (rs9267665 and rs10947223) were identified among the C2 variants. (PMID:29283494)
- The pooled ORs for rs551397, rs2274700, rs4151667, rs641153, rs1047286, rs9332739, and rs547154 in the heterozygote model were 0.53, 0.53 , 0.54, 0.48, 1.42, 0.50, and 0.52, respectively. We confirmed the protective role of C2/CFB/CFH polymorphisms in the development of Age-Related Macular Degeneration (AMD), and showed single nucleotide polymorphism in C3 was a high-risk factor for AMD (PMID:30179527)
- Hereditary Deficiency of the Second Component of Complement: Early Diagnosis and 21-Year Follow-Up of a Family. (PMID:32164349)
- Complement protein levels and MBL2 polymorphisms are associated with dengue and disease severity. (PMID:32913345)
- Gain-of-Function Mutations R249C and S250C in Complement C2 Protein Increase C3 Deposition in the Presence of C-Reactive Protein. (PMID:34899688)
- Proteomic analysis of diabetes genetic risk scores identifies complement C2 and neuropilin-2 as predictors of type 2 diabetes: the Atherosclerosis Risk in Communities (ARIC) Study. (PMID:36194249)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | C2 | ENSMUSG00000024371 |
| rattus_norvegicus | C2 | ENSRNOG00000051235 |
Paralogs (39): CFH (ENSG00000000971), SELE (ENSG00000007908), C8B (ENSG00000021852), C6 (ENSG00000039537), SEZ6 (ENSG00000063015), CFHR2 (ENSG00000080910), APOH (ENSG00000091583), SEZ6L (ENSG00000100095), SUSD6 (ENSG00000100647), SRPX (ENSG00000101955), SRPX2 (ENSG00000102359), C7 (ENSG00000112936), C9 (ENSG00000113600), PAPPA2 (ENSG00000116183), CFHR3 (ENSG00000116785), CR2 (ENSG00000117322), CD46 (ENSG00000117335), CSMD2 (ENSG00000121904), C4BPA (ENSG00000123838), C4BPB (ENSG00000123843), CFHR4 (ENSG00000134365), CFHR5 (ENSG00000134389), F13B (ENSG00000143278), SUSD4 (ENSG00000143502), C8A (ENSG00000157131), SUSD3 (ENSG00000157303), CSMD3 (ENSG00000164796), SVEP1 (ENSG00000165124), SELP (ENSG00000174175), SEZ6L2 (ENSG00000174938), PRF1 (ENSG00000180644), PAPPA (ENSG00000182752), CSMD1 (ENSG00000183117), SELL (ENSG00000188404), CD55 (ENSG00000196352), CR1L (ENSG00000197721), CR1 (ENSG00000203710), CFB (ENSG00000243649), CFHR1 (ENSG00000244414)
Protein
Protein identifiers
Complement C2 — P06681 (reviewed: P06681)
Alternative names: C3/C5 convertase
All UniProt accessions (17): A0A8Q3WKM6, A0A8Q3WKM9, A0A8Q3WKN5, A0A8Q3WL70, P06681, A2ABG0, B4DQI1, C9JYQ5, E9PDZ0, F2Z306, F2Z3N2, F8WCJ9, H0Y3H6, H0Y868, Q5JP69, Q5ST52, Q8N6L6
UniProt curated annotations — full annotation on UniProt →
Function. Precursor of the catalytic component of the C3 and C5 convertase complexes, which are part of the complement pathway, a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system. Component C2 is part of the classical, lectin and GZMK complement systems. Catalytic component of the complement C3 and C5 convertase complexes. Following complement activation, recruited to the surface of pathogens by complement C4b opsonin to form the C3 convertase, or C3b and C4b opsonins to form the C5 convertase. As part of the C3 convertase, cleaves and activate C3 into C3a anaphylatoxin and C3b opsonin, the next components of the complement pathways. As part of the C5 convertase, cleaves and activate C5 into C5a anaphylatoxin and C5b component of the membrane attack complex.
Subunit / interactions. Serine protease component of the C3 convertase, also named C4bC2b, composed of the serine protease complement C2b and complement C4b. Serine protease component of the C5 convertase, also named C4bC2bC3b, composed of the serine protease complement C2b, complement C3b, as well as complement C4b. (Microbial infection) Interacts with Schistosoma haematobium TOR (via N-terminal extracellular domain). This results in inhibition of the classical and lectin pathway of complement activation, probably due to interference with binding of C2a to C4b such that C3 convertase cannot be formed. This infers resistance to complement-mediated cell lysis, allowing parasite survival and infection.
Subcellular location. Secreted. Cell surface.
Post-translational modifications. Cleaved and activated by different proteases depending on the complement pathway to generate complement C2a and serine protease complement C2b chains. Cleaved and activated by C1S following activation by the classical complement system. Cleaved and activated by MASP2 following activation by the lectin complement system. Cleaved and activated by GZMK following activation by the GZMK complement system.
Disease relevance. Macular degeneration, age-related, 14 (ARMD14) [MIM:615489] A form of age-related macular degeneration, a multifactorial eye disease and the most common cause of irreversible vision loss in the developed world. In most patients, the disease is manifest as ophthalmoscopically visible yellowish accumulations of protein and lipid that lie beneath the retinal pigment epithelium and within an elastin-containing structure known as Bruch membrane. Disease susceptibility may be associated with variants affecting the gene represented in this entry. Haplotype analyzes have identified a statistically significant common risk haplotype and two protective haplotypes. CFB variant His-9 and C2 variant Asp-318, as well as CFB variant Gln-32 and a variant in intron 10 of C2, confer a significantly reduced risk of AMD. Complement component 2 deficiency (C2D) [MIM:217000] A rare defect of the complement classical pathway associated with the development of autoimmune disorders, mainly systemic lupus erythematosus. Skin and joint manifestations are common and renal disease is relatively rare. Patients with complement component 2 deficiency are also reported to have recurrent invasive infections. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. The MIDAS-like motif in the VWFA domain binds divalent metal cations.
Miscellaneous. C2 is a major histocompatibility complex class-III protein.
Similarity. Belongs to the peptidase S1 family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P06681-1 | 1 | yes |
| P06681-2 | 2 | |
| P06681-3 | 3 |
RefSeq proteins (6): NP_000054, NP_001139375, NP_001171534, NP_001269386, NP_001269387, NP_001269388 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000436 | Sushi_SCR_CCP_dom | Domain |
| IPR001254 | Trypsin_dom | Domain |
| IPR001314 | Peptidase_S1A | Family |
| IPR002035 | VWF_A | Domain |
| IPR009003 | Peptidase_S1_PA | Homologous_superfamily |
| IPR011360 | Compl_C2_B | Family |
| IPR018114 | TRYPSIN_HIS | Active_site |
| IPR033116 | TRYPSIN_SER | Active_site |
| IPR035976 | Sushi/SCR/CCP_sf | Homologous_superfamily |
| IPR036465 | vWFA_dom_sf | Homologous_superfamily |
| IPR043504 |
Pfam: PF00084, PF00089, PF00092
UniProt features (128 total): strand 43, helix 24, disulfide bond 11, glycosylation site 8, binding site 6, sequence variant 6, domain 5, mutagenesis site 5, sequence conflict 5, chain 3, active site 3, turn 3, splice variant 3, signal peptide 1, site 1, short sequence motif 1
Structure
Experimental structures (PDB)
14 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3ERB | X-RAY DIFFRACTION | 1.8 |
| 8ACF | X-RAY DIFFRACTION | 1.8 |
| 8ACI | X-RAY DIFFRACTION | 1.85 |
| 2ODP | X-RAY DIFFRACTION | 1.9 |
| 2I6Q | X-RAY DIFFRACTION | 2.1 |
| 2ODQ | X-RAY DIFFRACTION | 2.3 |
| 2I6S | X-RAY DIFFRACTION | 2.7 |
| 9U60 | ELECTRON MICROSCOPY | 2.9 |
| 9U5Z | ELECTRON MICROSCOPY | 3.1 |
| 9U61 | ELECTRON MICROSCOPY | 3.1 |
| 9QJ5 | ELECTRON MICROSCOPY | 3.5 |
| 9QK2 | ELECTRON MICROSCOPY | 3.5 |
| 9QJ4 | ELECTRON MICROSCOPY | 3.9 |
| 9QPY | ELECTRON MICROSCOPY | 4.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P06681-F1 | 88.61 | 0.66 |
Antibody-complex structures (SAbDab): 2 — 8ACF, 8ACI
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (4): 507 (charge relay system); 561 (charge relay system); 679 (charge relay system); 243–244 (cleavage; by c1s, masp2 and gzmk)
Ligand- & substrate-binding residues (6): 262; 262; 264; 264; 337; 337
Disulfide bonds (11): 24–64, 51–84, 89–131, 117–144, 151–191, 177–204, 463–581, 492–508, 584–600, 638–665, 675–705
Glycosylation sites (8): 29, 112, 290, 333, 467, 471, 621, 651
Mutagenesis-validated functional residues (5):
| Position | Phenotype |
|---|---|
| 261 | prolonged activity and half-life. |
| 263 | prolonged activity and half-life. |
| 344 | promotes partial resistance to degradation, slightly increasing half-life of the protein. |
| 347 | promotes resistance to degradation, increasing half-life of the protein. |
| 348 | promotes partial resistance to degradation, slightly increasing half-life of the protein. |
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-166663 | Initial triggering of complement |
| R-HSA-174577 | Activation of C3 and C5 |
| R-HSA-977606 | Regulation of Complement cascade |
MSigDB gene sets: 259 (showing top):
MODULE_172, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, MODULE_45, GOCC_CELL_SURFACE, GOBP_APOPTOTIC_CELL_CLEARANCE, GOBP_VESICLE_MEDIATED_TRANSPORT, GAURNIER_PSMD4_TARGETS, GOBP_LEUKOCYTE_MEDIATED_IMMUNITY, GOBP_REGULATION_OF_VESICLE_MEDIATED_TRANSPORT, GOBP_B_CELL_MEDIATED_IMMUNITY, YAN_ESCAPE_FROM_ANOIKIS, PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP, GOBP_REGULATION_OF_IMMUNE_RESPONSE, MODULE_75
GO Biological Process (11): proteolysis (GO:0006508), complement activation (GO:0006956), complement activation, classical pathway (GO:0006958), response to nutrient (GO:0007584), response to bacterium (GO:0009617), response to lipopolysaccharide (GO:0032496), response to thyroid hormone (GO:0097066), complement activation, GZMK pathway (GO:0160257), positive regulation of apoptotic cell clearance (GO:2000427), immune system process (GO:0002376), innate immune response (GO:0045087)
GO Molecular Function (6): serine-type endopeptidase activity (GO:0004252), metal ion binding (GO:0046872), protein binding (GO:0005515), peptidase activity (GO:0008233), serine-type peptidase activity (GO:0008236), hydrolase activity (GO:0016787)
GO Cellular Component (5): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), cell surface (GO:0009986), extracellular exosome (GO:0070062), symbiont cell surface (GO:0106139)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Complement cascade | 3 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| complement activation | 2 |
| cellular anatomical structure | 2 |
| protein metabolic process | 1 |
| immune effector process | 1 |
| activation of immune response | 1 |
| humoral immune response | 1 |
| protein activation cascade | 1 |
| humoral immune response mediated by circulating immunoglobulin | 1 |
| response to nutrient levels | 1 |
| response to chemical | 1 |
| response to other organism | 1 |
| response to molecule of bacterial origin | 1 |
| response to lipid | 1 |
| response to oxygen-containing compound | 1 |
| response to hormone | 1 |
| innate immune response | 1 |
| apoptotic cell clearance | 1 |
| positive regulation of phagocytosis | 1 |
| regulation of apoptotic cell clearance | 1 |
| biological_process | 1 |
| immune response | 1 |
| defense response to symbiont | 1 |
| endopeptidase activity | 1 |
| serine-type peptidase activity | 1 |
| cation binding | 1 |
| binding | 1 |
| hydrolase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| peptidase activity | 1 |
| serine hydrolase activity | 1 |
| catalytic activity | 1 |
| extracellular vesicle | 1 |
| other organism part | 1 |
Protein interactions and networks
STRING
886 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| C2 | CFH | P08603 | 862 |
| C2 | ARMS2 | P0C7Q2 | 765 |
| C2 | CFHR3 | Q02985 | 758 |
| C2 | DXO | O77932 | 740 |
| C2 | CFHR1 | Q03591 | 739 |
| C2 | C4A | P01028 | 732 |
| C2 | C3 | P01024 | 729 |
| C2 | C4A | P01028 | 723 |
| C2 | CD55 | P08174 | 702 |
| C2 | CFI | P05156 | 696 |
| C2 | HMCN1 | Q96RW7 | 679 |
| C2 | SKIC2 | Q15477 | 651 |
| C2 | WHR1 | P49842 | 623 |
| C2 | FBLN5 | Q9UBX5 | 616 |
| C2 | ABCA4 | P78363 | 587 |
| C2 | PLEKHA1 | Q9HB21 | 587 |
IntAct
37 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| C1S | SERPING1 | psi-mi:“MI:0570”(protein cleavage) | 0.720 |
| C2 | CREB3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | SEC11C | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | ERGIC3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | STOM | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | SLC35C2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | MUC1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | FAM209A | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | SLC10A1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| C2 | EBP | psi-mi:“MI:0915”(physical association) | 0.560 |
| C1S | C2 | psi-mi:“MI:0570”(protein cleavage) | 0.440 |
| C2 | CD55 | psi-mi:“MI:0915”(physical association) | 0.400 |
| M | psi-mi:“MI:0914”(association) | 0.350 | |
| C2 | SEC11C | psi-mi:“MI:0915”(physical association) | 0.000 |
| C2 | ERGIC3 | psi-mi:“MI:0915”(physical association) | 0.000 |
| C2 | STOM | psi-mi:“MI:0915”(physical association) | 0.000 |
| C2 | SLC35C2 | psi-mi:“MI:0915”(physical association) | 0.000 |
| C2 | MUC1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| C2 | SLC10A1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| C2 | FAM209A | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (14): CREB3 (Two-hybrid), CD55 (Affinity Capture-MS), C2 (Two-hybrid), C2 (Two-hybrid), C2 (Two-hybrid), C2 (Two-hybrid), C2 (Two-hybrid), C2 (Two-hybrid), SEC11C (Two-hybrid), MUC1 (Two-hybrid), C2 (Affinity Capture-RNA), C2 (Reconstituted Complex), C2 (Reconstituted Complex), CD55 (Affinity Capture-MS)
ESM2 similar proteins: A0A1D5NSM8, A2AVA0, B1AUH1, B3DK56, D3YXF5, E9Q6D8, G5E8Q8, O18016, O18023, O43278, O97827, P06681, P0C6B8, P13671, P21180, P28175, P35442, P35448, P61134, P61135, Q03350, Q05793, Q08E66, Q26422, Q29RU4, Q3SYW2, Q4LDE5, Q5E9P5, Q5G872, Q5MD89, Q5RDI1, Q6DIV5, Q6GP28, Q6NZL8, Q6UXH9, Q6YI48, Q7TQN3, Q811M5, Q863A0, Q8BU25
Diamond homologs: A0A1D5NSM8, A0JNA2, A2AVA0, A2AX52, D3YXF5, O02839, O19063, O35764, O43405, O70340, O76536, O89029, O95502, O96530, P02741, P02743, P06205, P06206, P06207, P06681, P07202, P07629, P08607, P09871, P0C6B8, P10643, P12246, P13944, P14151, P14847, P15697, P18337, P23680, P32018, P47970, P47971, P47972, P48199, P49254, P49262
SIGNOR signaling
7 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| MASP2 | “up-regulates activity” | C2 | cleavage |
| MASP1 | “up-regulates activity” | C2 | cleavage |
| C2 | “form complex” | “C3 convertase complex” | binding |
| “Complement C1 complex” | “up-regulates activity” | C2 | cleavage |
Disease & clinical
Clinical variants and AI predictions
ClinVar
513 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 17 |
| Likely pathogenic | 11 |
| Uncertain significance | 237 |
| Likely benign | 179 |
| Benign | 8 |
Top pathogenic / likely-pathogenic (28)
| Variant ID | HGVS | Classification |
|---|---|---|
| 12128 | NM_000063.6(C2):c.626C>T (p.Ser209Phe) | Pathogenic |
| 1452098 | NM_000063.6(C2):c.37del (p.Leu13fs) | Pathogenic |
| 2054147 | NM_000063.6(C2):c.275_276del (p.Pro92fs) | Pathogenic |
| 2750154 | NM_000063.6(C2):c.917del (p.Met306fs) | Pathogenic |
| 2818188 | NM_000063.6(C2):c.970G>T (p.Glu324Ter) | Pathogenic |
| 2842298 | NM_000063.6(C2):c.1654C>T (p.Gln552Ter) | Pathogenic |
| 2870130 | NM_000063.6(C2):c.795_796del (p.Ser266fs) | Pathogenic |
| 2876427 | NM_000063.6(C2):c.630T>A (p.Tyr210Ter) | Pathogenic |
| 2965736 | NM_000063.6(C2):c.768C>G (p.Tyr256Ter) | Pathogenic |
| 3246079 | NC_000006.11:g.(?31895530)(31905256_?)del | Pathogenic |
| 3257316 | NM_000063.6(C2):c.1215T>A (p.Tyr405Ter) | Pathogenic |
| 3393189 | NM_000063.6(C2):c.1902+1G>A | Pathogenic |
| 3720679 | NM_000063.6(C2):c.235_236del (p.Leu79fs) | Pathogenic |
| 4712064 | NM_000063.6(C2):c.1790del (p.Gly597fs) | Pathogenic |
| 4781380 | NM_000063.6(C2):c.626_627dup (p.Tyr210fs) | Pathogenic |
| 4800554 | NM_000063.6(C2):c.1366_1367del (p.Ser456fs) | Pathogenic |
| 591016 | NM_000063.6(C2):c.1102C>T (p.Arg368Ter) | Pathogenic |
| 1910255 | NM_000063.6(C2):c.715+1G>T | Likely pathogenic |
| 1916286 | NM_000063.6(C2):c.616+1G>A | Likely pathogenic |
| 2125178 | NM_000063.6(C2):c.1733+1G>A | Likely pathogenic |
| 2179104 | NM_000063.6(C2):c.616+2T>G | Likely pathogenic |
| 2706458 | NM_000063.6(C2):c.1361-1G>T | Likely pathogenic |
| 2726593 | NM_000063.6(C2):c.2030-1G>A | Likely pathogenic |
| 3381002 | NM_000063.6(C2):c.1829_1832del (p.Lys610fs) | Likely pathogenic |
| 3692514 | NM_000063.6(C2):c.1810+2T>G | Likely pathogenic |
| 369516 | NM_000063.6(C2):c.1360+1G>A | Likely pathogenic |
| 4081217 | NM_000063.6(C2):c.1683_1685delinsATA (p.Asp561_Ile562delinsGluTer) | Likely pathogenic |
| 915386 | NM_000063.6(C2):c.839_849del (p.Met280fs) | Likely pathogenic |
SpliceAI
3454 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 6:31933781:GCC:G | donor_gain | 1.0000 |
| 6:31933784:G:GG | donor_gain | 1.0000 |
| 6:31933861:CCACA:C | acceptor_loss | 1.0000 |
| 6:31933862:CACA:C | acceptor_loss | 1.0000 |
| 6:31933862:CACAG:C | acceptor_loss | 1.0000 |
| 6:31933863:ACAG:A | acceptor_loss | 1.0000 |
| 6:31933863:ACAGA:A | acceptor_loss | 1.0000 |
| 6:31933864:CA:C | acceptor_loss | 1.0000 |
| 6:31933865:A:AG | acceptor_gain | 1.0000 |
| 6:31933865:A:G | acceptor_loss | 1.0000 |
| 6:31933866:G:GA | acceptor_gain | 1.0000 |
| 6:31933866:G:GG | acceptor_gain | 1.0000 |
| 6:31933962:AAGG:A | donor_gain | 1.0000 |
| 6:31933963:AGG:A | donor_gain | 1.0000 |
| 6:31933964:GG:G | donor_gain | 1.0000 |
| 6:31933964:GGG:G | donor_gain | 1.0000 |
| 6:31933964:GGGTG:G | donor_loss | 1.0000 |
| 6:31933965:GG:G | donor_gain | 1.0000 |
| 6:31933965:GGT:G | donor_loss | 1.0000 |
| 6:31933966:G:GG | donor_gain | 1.0000 |
| 6:31933966:GTGA:G | donor_loss | 1.0000 |
| 6:31933967:T:A | donor_loss | 1.0000 |
| 6:31933967:T:G | donor_loss | 1.0000 |
| 6:31934274:A:T | donor_gain | 1.0000 |
| 6:31937306:T:TA | acceptor_gain | 1.0000 |
| 6:31937307:G:A | acceptor_gain | 1.0000 |
| 6:31937310:A:AG | acceptor_gain | 1.0000 |
| 6:31937311:T:G | acceptor_gain | 1.0000 |
| 6:31937312:A:AG | acceptor_gain | 1.0000 |
| 6:31937314:TCCAG:T | acceptor_loss | 1.0000 |
AlphaMissense
4972 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 6:31933758:G:C | W197C | 0.999 |
| 6:31933758:G:T | W197C | 0.999 |
| 6:31943302:T:A | W480R | 0.998 |
| 6:31943302:T:C | W480R | 0.998 |
| 6:31928886:G:C | W137C | 0.997 |
| 6:31928886:G:T | W137C | 0.997 |
| 6:31933756:T:A | W197R | 0.997 |
| 6:31933756:T:C | W197R | 0.997 |
| 6:31943304:G:C | W480C | 0.997 |
| 6:31943304:G:T | W480C | 0.997 |
| 6:31943924:T:C | C581R | 0.997 |
| 6:31928118:G:C | W70C | 0.996 |
| 6:31928118:G:T | W70C | 0.996 |
| 6:31943924:T:A | C581S | 0.996 |
| 6:31943925:G:C | C581S | 0.996 |
| 6:31943926:C:G | C581W | 0.996 |
| 6:31943933:T:C | C584R | 0.996 |
| 6:31945190:A:C | S698R | 0.996 |
| 6:31945192:C:A | S698R | 0.996 |
| 6:31945192:C:G | S698R | 0.996 |
| 6:31928866:T:A | C131S | 0.995 |
| 6:31928867:G:C | C131S | 0.995 |
| 6:31928884:T:A | W137R | 0.995 |
| 6:31928884:T:C | W137R | 0.995 |
| 6:31933738:T:A | C191S | 0.995 |
| 6:31933739:G:C | C191S | 0.995 |
| 6:31943465:T:A | V502D | 0.995 |
| 6:31943482:T:A | C508S | 0.995 |
| 6:31943483:G:C | C508S | 0.995 |
| 6:31943484:C:G | C508W | 0.995 |
dbSNP variants (sampled 300 via entrez): RS1000055943 (6:31906530 G>C), RS1000085928 (6:31908097 C>T), RS1000154409 (6:31916621 GGC>G), RS1000170944 (6:31938475 T>C), RS1000331243 (6:31924981 C>G), RS1000458044 (6:31908351 C>T), RS1000484025 (6:31931733 C>G,T), RS1000517218 (6:31922384 C>A), RS1000533023 (6:31907000 C>G,T), RS1000594486 (6:31913173 C>T), RS1000605161 (6:31938723 G>A), RS1000625618 (6:31913405 A>C,G), RS1000666722 (6:31929796 G>A), RS1000900895 (6:31899814 C>A), RS1001000490 (6:31940012 G>T)
Disease associations
OMIM: gene MIM:613927 | disease phenotypes: MIM:217000, MIM:615489, MIM:612924
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| complement component 2 deficiency | Strong | Autosomal recessive |
Mondo (6): complement component 2 deficiency (MONDO:0009006), age related macular degeneration 14 (MONDO:0014207), atypical hemolytic-uremic syndrome with B factor anomaly (MONDO:0013042), atypical hemolytic-uremic syndrome (MONDO:0016244), focal segmental glomerulosclerosis (MONDO:0100313), macular degeneration (MONDO:0003004)
Orphanet (2): Atypical hemolytic uremic syndrome (Orphanet:2134), OBSOLETE: Atypical hemolytic uremic syndrome with B factor anomaly (Orphanet:93578)
HPO phenotypes
3 total (3 of 3 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000979 | Purpura |
| HP:0002725 | Systemic lupus erythematosus |
GWAS associations
68 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000652_5 | Age-related macular degeneration | 2.000000e-08 |
| GCST000652_8 | Age-related macular degeneration | 3.000000e-21 |
| GCST000653_7 | Age-related macular degeneration | 2.000000e-20 |
| GCST000902_3 | Hepatocellular carcinoma | 2.000000e-06 |
| GCST001100_11 | Age-related macular degeneration | 2.000000e-23 |
| GCST001578_4 | Age-related macular degeneration (geographic atrophy) | 1.000000e-06 |
| GCST001579_5 | Age-related macular degeneration (choroidal neovascularisation) | 2.000000e-08 |
| GCST001884_13 | Age-related macular degeneration | 4.000000e-89 |
| GCST001942_21 | Prostate cancer | 5.000000e-09 |
| GCST001979_2 | Circulating myeloperoxidase levels (serum) | 1.000000e-08 |
| GCST002463_14 | Systemic lupus erythematosus | 8.000000e-21 |
| GCST003219_23 | Advanced age-related macular degeneration | 1.000000e-103 |
| GCST003219_24 | Advanced age-related macular degeneration | 3.000000e-06 |
| GCST003219_25 | Advanced age-related macular degeneration | 9.000000e-12 |
| GCST003219_26 | Advanced age-related macular degeneration | 3.000000e-10 |
| GCST004131_25 | Inflammatory bowel disease | 2.000000e-31 |
| GCST004133_79 | Ulcerative colitis | 5.000000e-65 |
| GCST004521_114 | Autism spectrum disorder or schizophrenia | 3.000000e-17 |
| GCST004521_117 | Autism spectrum disorder or schizophrenia | 3.000000e-15 |
| GCST004521_118 | Autism spectrum disorder or schizophrenia | 3.000000e-15 |
| GCST004521_126 | Autism spectrum disorder or schizophrenia | 2.000000e-10 |
| GCST004521_154 | Autism spectrum disorder or schizophrenia | 3.000000e-08 |
| GCST004521_162 | Autism spectrum disorder or schizophrenia | 3.000000e-08 |
| GCST004521_17 | Autism spectrum disorder or schizophrenia | 2.000000e-12 |
| GCST004521_173 | Autism spectrum disorder or schizophrenia | 4.000000e-14 |
| GCST004521_209 | Autism spectrum disorder or schizophrenia | 5.000000e-16 |
| GCST004521_211 | Autism spectrum disorder or schizophrenia | 5.000000e-15 |
| GCST004521_213 | Autism spectrum disorder or schizophrenia | 5.000000e-13 |
| GCST004521_224 | Autism spectrum disorder or schizophrenia | 5.000000e-10 |
| GCST004521_227 | Autism spectrum disorder or schizophrenia | 4.000000e-12 |
EFO canonical traits (12, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:1001492 | atrophic macular degeneration |
| EFO:0005243 | myeloperoxidase measurement |
| EFO:0008377 | mosquito bite reaction itch intensity measurement |
| EFO:0008378 | mosquito bite reaction size measurement |
| EFO:0008336 | disease progression measurement |
| EFO:0006781 | coffee consumption measurement |
| EFO:0008039 | BMI-adjusted hip circumference |
| EFO:0007788 | BMI-adjusted waist-hip ratio |
| EFO:0009130 | clostridium difficile infection |
| EFO:0004531 | urate measurement |
| EFO:0009749 | age at first sexual intercourse measurement |
| EFO:0007789 | BMI-adjusted waist circumference |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D065766 | Atypical Hemolytic Uremic Syndrome | C12.050.351.968.419.936.463.500; C12.200.777.419.936.463.500; C12.950.419.936.463.500; C15.378.050.141.610.500; C15.378.140.855.925.500.500; C15.378.243.937.925.500.500 |
| D005923 | Glomerulosclerosis, Focal Segmental | C12.050.351.968.419.570.363.640; C12.200.777.419.570.363.660; C12.950.419.570.363.640 |
| D008268 | Macular Degeneration | C11.768.585.439 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4295701 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs9332739 | C2 | 0.00 | 0 |
ChEMBL bioactivities
3 potent at pChembl≥5 of 4 total, top 3 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.48 | IC50 | 330 | nM | CHEMBL4247125 |
| 6.30 | IC50 | 500 | nM | CHEMBL4247125 |
| 5.14 | IC50 | 7300 | nM | CHEMBL4247125 |
PubChem BioAssay actives
3 with measured affinity, of 4 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S)-2-[[(2S)-2-acetamido-5-(diaminomethylideneamino)pentanoyl]amino]-N-[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]-4-methylpentanamide | 1393232: Competitive/reversible inhibition of human C2 using Ac-SHLGLAR-pNA as substrate | ic50 | 0.3300 | uM |
CTD chemical–gene interactions
39 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Aflatoxin B1 | affects expression, affects methylation, decreases expression | 3 |
| Benzo(a)pyrene | affects methylation, decreases expression, decreases methylation | 2 |
| Smoke | decreases expression | 2 |
| Tetrachlorodibenzodioxin | increases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| propionaldehyde | increases expression | 1 |
| bisphenol A | increases expression | 1 |
| beta-lapachone | decreases expression, increases expression | 1 |
| sodium arsenite | increases expression | 1 |
| butyraldehyde | increases expression | 1 |
| perfluorooctanoic acid | decreases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
| potassium chromate(VI) | decreases expression | 1 |
| aflatoxin B2 | decreases methylation | 1 |
| chromium hexavalent ion | decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Aripiprazole | increases expression, affects cotreatment | 1 |
| Fulvestrant | increases methylation | 1 |
| Acetaminophen | decreases expression | 1 |
| Glyphosate | increases expression | 1 |
| Air Pollutants, Occupational | increases expression | 1 |
| Allergens | affects cotreatment, increases expression | 1 |
| Vehicle Emissions | increases expression, affects cotreatment | 1 |
| Benzene | increases expression | 1 |
| Calcitriol | decreases expression | 1 |
| Estradiol | decreases expression, affects cotreatment | 1 |
| Methapyrilene | decreases methylation | 1 |
| Nickel | increases expression | 1 |
| Ozone | affects cotreatment, increases expression | 1 |
ChEMBL screening assays
4 unique, capped per target: 4 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4229702 | Binding | Competitive/reversible inhibition of human C2 using Ac-SHLGLAR-pNA as substrate | Chemical Approaches to Modulating Complement-Mediated Diseases. — J Med Chem |
Clinical trials (associated diseases)
299 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02574403 | PHASE4 | COMPLETED | Study Assessing an Algorithm-based Strategy of Eculizumab Discontinuation in Children and Adults With aHUS |
| NCT07308574 | PHASE4 | RECRUITING | Post-Marketing Clinical Study of Ravulizumab in Participants With Clinical aHUS |
| NCT01129557 | PHASE4 | TERMINATED | Aldosterone Breakthrough During Diovan, Tekturna, and Combination Therapy in Patients With Proteinuric Kidney Disease |
| NCT02399462 | PHASE4 | WITHDRAWN | Acthar for Treatment of Post-transplant FSGS |
| NCT02585804 | PHASE4 | COMPLETED | Treating to Reduce Albuminuria and Normalize Hemodynamic Function in Focal ScLerosis With dApagliflozin Trial Effects |
| NCT02633046 | PHASE4 | COMPLETED | Acthar for Treatment-Resistant or Treatment-Intolerant Proteinuria |
| NCT07219121 | PHASE4 | RECRUITING | Sparsentan in Posttransplant Immunoglobulin A Nephropathy or Focal Segmental Glomerulosclerosis |
| NCT00312351 | PHASE4 | TERMINATED | A Clinical Trial to Explore the Safety and Efficacy of Three Different Doses of Pegaptanib Sodium in Patients With Wet Age-Related Macular Degeneration (AMD) |
| NCT00324116 | PHASE4 | COMPLETED | Evaluation Of Safety And Efficacy Of 0.3 Mg/Eye Macugen In Patients With Small Age-Related Macular Degeneration Lesions |
| NCT00327470 | PHASE4 | TERMINATED | An Open Label Trial to Investigate Macugen for the Preservation of Visual Function in Subjects With Neovascular AMD |
| NCT00533520 | PHASE4 | COMPLETED | Evaluation of Dosing Interval of Higher Doses of Ranibizumab |
| NCT00813891 | PHASE4 | UNKNOWN | Efficacy of Ranibizumab in Combination With Photodynamic Therapy for Wet Age-Related Macular Degeneration |
| NCT01006538 | PHASE4 | COMPLETED | Macular EpiRetinal Brachytherapy Versus Lucentis® Only Treatment (MERLOT) |
| NCT01213667 | PHASE4 | UNKNOWN | Genetics in Non-response to Anti-VEGF Treatment in Exudative AMD |
| NCT01831947 | PHASE4 | COMPLETED | Efficacy Study of Ranibizumab on Patients With Age-related Macular Degeneration. |
| NCT02581891 | PHASE4 | COMPLETED | Managing Neovascular (Known as Wet) Age-related Macular Degeneration Over 2 Years Using Different Treatment Schedules of 2 mg Intravitreal Aflibercept Injected in the Eye |
| NCT02689518 | PHASE4 | COMPLETED | EAGLE: Evaluating Genotypes Using Intravitreal Aflibercept Injection |
| NCT03804099 | PHASE4 | COMPLETED | Effect Aflibercept on Ocular Perfusion |
| NCT07367282 | PHASE4 | NOT_YET_RECRUITING | Evaluate the Efficacy of Faricimab in Patients With Neovascular Age-related Macular Degeneration |
| NCT02949128 | PHASE3 | COMPLETED | Study of ALXN1210 in Complement Inhibitor Treatment-Naïve Adult and Adolescent Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT03131219 | PHASE3 | COMPLETED | Study of Ravulizumab in Children and Adolescents With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT03205995 | PHASE3 | TERMINATED | Safety and Efficacy Study of OMS721 in Patients With Atypical Hemolytic Uremic Syndrome |
| NCT04861259 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Evaluating the Efficacy, Safety, Pharmacokinetics and Pharmacodynamics of Crovalimab in Adult and Adolescent Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT04889430 | PHASE3 | COMPLETED | Efficacy and Safety of Iptacopan (LNP023) in Adult Patients With Atypical Hemolytic Uremic Syndrome Naive to Complement Inhibitor Therapy |
| NCT04958265 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Evaluating the Efficacy, Safety, Pharmacokinetics and Pharmacodynamics of Crovalimab in Pediatric Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
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| NCT05935215 | PHASE3 | RECRUITING | Efficacy and Safety of Switching From Anti-C5 Antibody Treatment to Iptacopan Treatment in Study Participants With Atypical Hemolytic Uremic Syndrome (aHUS) |
| NCT01164098 | PHASE3 | TERMINATED | Rituximab to Prevent Recurrence of Proteinuria |
| NCT02683889 | PHASE3 | COMPLETED | Use of Acthar in Patients With FSGS That Will be Undergoing Renal Transplantation |
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| NCT03493685 | PHASE3 | COMPLETED | Study of Sparsentan in Patients With Primary Focal Segmental Glomerulosclerosis (FSGS) |
| NCT05183646 | PHASE3 | RECRUITING | A Study of the Efficacy and Safety of DMX-200 in Patients With FSGS Who Are Receiving an ARB |
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| NCT00000145 | PHASE3 | COMPLETED | Age-Related Eye Disease Study (AREDS) |
| NCT00000150 | PHASE3 | COMPLETED | Submacular Surgery Trials (SST) |
| NCT00000152 | PHASE3 | UNKNOWN | Randomized Trial of Beta-Carotene and Macular Degeneration |
| NCT00000158 | PHASE3 | UNKNOWN | Macular Photocoagulation Study (MPS) |
| NCT00000161 | PHASE3 | UNKNOWN | Randomized Trials of Vitamin Supplements and Eye Disease |
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Related Atlas pages
- Associated diseases: complement component 2 deficiency
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): age related macular degeneration 14, age-related macular degeneration, atypical hemolytic-uremic syndrome, atypical hemolytic-uremic syndrome with B factor anomaly, complement component 2 deficiency, coronary artery disorder, endometriosis, focal segmental glomerulosclerosis, hepatocellular carcinoma, macular degeneration, prostate carcinoma, ulcerative colitis, wet macular degeneration