C5orf34-AS1

Summary

C5orf34-AS1 (C5orf34 antisense RNA 1, HGNC:41061) is a long non-coding RNA gene on chromosome 5p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41061
Approved symbol	C5orf34-AS1
Name	C5orf34 antisense RNA 1
Location	5p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248554
Ensembl biotype	lncRNA
Entrez	105374749
RNAcentral	URS0000EF2AB8 — lncRNA, 2781 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 19 — 18 lncRNA, 1 retained_intron

ENST00000504277, ENST00000504469, ENST00000505645, ENST00000512498, ENST00000664081, ENST00000692330, ENST00000717668, ENST00000717669, ENST00000717670, ENST00000717671, ENST00000717672, ENST00000717673, ENST00000728992, ENST00000821929, ENST00000821930, ENST00000821931, ENST00000821932, ENST00000821933, ENST00000850658

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504277 — 3 exons

Exon	Start	End
ENSE00002029045	43515854	43515964
ENSE00002059288	43525097	43525310
ENSE00004033100	43515274	43515460

Expression profiles

Bgee: expression breadth ubiquitous, 126 present calls, max score 90.60.

Top tissues by expression

126 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.60	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.02	silver quality
sural nerve	UBERON:0015488	77.85	gold quality
bone marrow cell	CL:0002092	68.18	silver quality
skeletal muscle tissue	UBERON:0001134	67.17	gold quality
stromal cell of endometrium	CL:0002255	66.95	gold quality
ganglionic eminence	UBERON:0004023	63.47	gold quality
ventricular zone	UBERON:0003053	62.90	gold quality
bone marrow	UBERON:0002371	59.69	silver quality
liver	UBERON:0002107	59.16	gold quality
right uterine tube	UBERON:0001302	58.70	gold quality
apex of heart	UBERON:0002098	57.06	gold quality
lymph node	UBERON:0000029	56.47	gold quality
skin of leg	UBERON:0001511	55.91	gold quality
zone of skin	UBERON:0000014	55.00	gold quality
right adrenal gland cortex	UBERON:0035827	54.85	gold quality
blood	UBERON:0000178	54.70	gold quality
prefrontal cortex	UBERON:0000451	54.47	gold quality
urinary bladder	UBERON:0001255	54.40	gold quality
calcaneal tendon	UBERON:0003701	54.05	gold quality
thyroid gland	UBERON:0002046	53.88	gold quality
primary visual cortex	UBERON:0002436	53.68	gold quality
skin of abdomen	UBERON:0001416	53.58	gold quality
duodenum	UBERON:0002114	53.55	gold quality
right adrenal gland	UBERON:0001233	53.31	gold quality
left lobe of thyroid gland	UBERON:0001120	53.28	gold quality
right lobe of thyroid gland	UBERON:0001119	53.09	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	53.05	gold quality
leukocyte	CL:0000738	52.95	gold quality
right lobe of liver	UBERON:0001114	52.84	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.