CA1
geneOn this page
Also known as Car1
Summary
CA1 (carbonic anhydrase 1, HGNC:1368) is a protein-coding gene on chromosome 8q21.2, encoding Carbonic anhydrase 1 (P00915). Catalyzes the reversible hydration of carbon dioxide.
Carbonic anhydrases (CAs) are a large family of zinc metalloenzymes that catalyze the reversible hydration of carbon dioxide. They participate in a variety of biological processes, including respiration, calcification, acid-base balance, bone resorption, and the formation of aqueous humor, cerebrospinal fluid, saliva and gastric acid. They show extensive diversity in tissue distribution and in their subcellular localization. This CA1 gene is closely linked to the CA2 and CA3 genes on chromosome 8. It encodes a cytosolic protein that is found at the highest level in erythrocytes. Allelic variants of this gene have been described in some populations. Alternative splicing and the use of alternative promoters results in multiple transcript variants.
Source: NCBI Gene 759 — RefSeq curated summary.
At a glance
- GWAS associations: 15
- Clinical variants (ClinVar): 47 total — 4 pathogenic
- Phenotypes (HPO): 1
- Druggable target: yes — 70 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001128831
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1368 |
| Approved symbol | CA1 |
| Name | carbonic anhydrase 1 |
| Location | 8q21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | Car1 |
| Ensembl gene | ENSG00000133742 |
| Ensembl biotype | protein_coding |
| OMIM | 114800 |
| Entrez | 759 |
Gene structure
Transcript identifiers
Ensembl transcripts: 28 — 21 protein_coding, 5 retained_intron, 1 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000431316, ENST00000517429, ENST00000517590, ENST00000517618, ENST00000518233, ENST00000518341, ENST00000519129, ENST00000519991, ENST00000520093, ENST00000520663, ENST00000520692, ENST00000520990, ENST00000521679, ENST00000521846, ENST00000522389, ENST00000522579, ENST00000522662, ENST00000522814, ENST00000523022, ENST00000523712, ENST00000523858, ENST00000523953, ENST00000524324, ENST00000542576, ENST00000626824, ENST00000875459, ENST00000875460, ENST00000875461
RefSeq mRNA: 7 — MANE Select: NM_001128831
NM_001128829, NM_001128830, NM_001128831, NM_001164830, NM_001291967, NM_001291968, NM_001738
CCDS: CCDS6237
Canonical transcript exons
ENST00000523022 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000795067 | 85329689 | 85329844 |
| ENSE00002104230 | 85327608 | 85328676 |
| ENSE00002123397 | 85378046 | 85378113 |
| ENSE00003480271 | 85341599 | 85341659 |
| ENSE00003506637 | 85338252 | 85338449 |
| ENSE00003588058 | 85332490 | 85332552 |
| ENSE00003668620 | 85333525 | 85333620 |
| ENSE00003789786 | 85336945 | 85337063 |
Expression profiles
Bgee: expression breadth ubiquitous, 177 present calls, max score 99.96.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 15.8830 / max 7625.9018, expressed in 149 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 93803 | 15.2752 | 145 |
| 93802 | 0.6078 | 7 |
Top tissues by expression
278 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of transverse colon | UBERON:0004991 | 99.96 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 99.90 | gold quality |
| colonic mucosa | UBERON:0000317 | 99.85 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 99.83 | gold quality |
| rectum | UBERON:0001052 | 99.82 | gold quality |
| bone marrow cell | CL:0002092 | 99.59 | gold quality |
| bone marrow | UBERON:0002371 | 98.89 | gold quality |
| monocyte | CL:0000576 | 95.03 | gold quality |
| colonic epithelium | UBERON:0000397 | 94.87 | gold quality |
| ileal mucosa | UBERON:0000331 | 94.70 | gold quality |
| mononuclear cell | CL:0000842 | 94.45 | gold quality |
| transverse colon | UBERON:0001157 | 93.08 | gold quality |
| blood | UBERON:0000178 | 92.28 | gold quality |
| leukocyte | CL:0000738 | 89.52 | gold quality |
| large intestine | UBERON:0000059 | 84.66 | gold quality |
| colon | UBERON:0001155 | 84.08 | gold quality |
| diaphragm | UBERON:0001103 | 83.79 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 82.08 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 79.31 | gold quality |
| superficial temporal artery | UBERON:0001614 | 78.83 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 77.86 | silver quality |
| intestine | UBERON:0000160 | 77.73 | gold quality |
| spleen | UBERON:0002106 | 75.81 | gold quality |
| right lung | UBERON:0002167 | 73.42 | gold quality |
| gingival epithelium | UBERON:0001949 | 72.14 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 72.06 | gold quality |
| hair follicle | UBERON:0002073 | 72.01 | gold quality |
| amniotic fluid | UBERON:0000173 | 71.60 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 71.16 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 70.16 | silver quality |
Single-cell (SCXA)
Detected in 13 experiment(s), a significant marker in 13.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-122 | yes | 10920.16 |
| E-CURD-6 | yes | 4463.17 |
| E-HCAD-9 | yes | 4244.98 |
| E-MTAB-9221 | yes | 3055.92 |
| E-CURD-46 | yes | 1945.25 |
| E-HCAD-15 | yes | 1019.06 |
| E-GEOD-76312 | yes | 797.09 |
| E-HCAD-6 | yes | 536.07 |
| E-HCAD-4 | yes | 160.88 |
| E-GEOD-125970 | yes | 30.86 |
| E-MTAB-8410 | yes | 16.10 |
| E-MTAB-9467 | yes | 4.31 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): CDX2, GATA1, HOXB7, LMO2, MYB, NR1I3, TAL1
miRNA regulators (miRDB)
26 targeting CA1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-4503 | 99.85 | 71.45 | 1869 |
| HSA-MIR-659-3P | 99.85 | 70.69 | 1620 |
| HSA-MIR-944 | 99.82 | 70.85 | 3042 |
| HSA-MIR-6126 | 99.62 | 68.09 | 996 |
| HSA-MIR-6132 | 99.60 | 65.83 | 1554 |
| HSA-MIR-6836-5P | 99.60 | 65.62 | 1538 |
| HSA-MIR-21-5P | 99.46 | 70.54 | 1035 |
| HSA-MIR-3915 | 99.45 | 68.49 | 1905 |
| HSA-MIR-183-3P | 99.41 | 69.41 | 1598 |
| HSA-MIR-590-5P | 99.25 | 70.76 | 930 |
| HSA-MIR-670-3P | 99.03 | 68.88 | 2404 |
| HSA-MIR-6876-3P | 98.97 | 65.69 | 765 |
| HSA-MIR-626 | 98.89 | 66.21 | 762 |
| HSA-MIR-34B-3P | 98.70 | 67.40 | 1171 |
| HSA-MIR-6792-5P | 98.39 | 68.16 | 1330 |
| HSA-MIR-4511 | 98.32 | 67.97 | 1500 |
| HSA-MIR-526B-5P | 97.41 | 67.99 | 1074 |
| HSA-MIR-1243 | 97.07 | 65.44 | 719 |
| HSA-MIR-6839-5P | 96.74 | 68.29 | 1088 |
| HSA-MIR-378J | 96.44 | 66.20 | 1020 |
| HSA-MIR-431-5P | 96.16 | 66.50 | 652 |
Literature-anchored findings (GeneRIF, showing 33)
- The X-ray crystallographic structure of the CA I Michigan 1 variant isozyme is reported, both in the presence and absence of a second bound zinc ion coordinated to His 64, His 200, and Arg 67. (PMID:12009884)
- concentrations in nondialyzed chronic kidney disease patients, and the relationship with acidosis, zinc, anemia, and iron supplementation (PMID:14675565)
- cytosolic CA I, II, and XIII are downregulated in neoplastic colorectal mucosa compared to normal colorectal mucosa (PMID:15836783)
- Isothiocyanato sulfonamide thioureas inhibit this enzyme. (PMID:15837325)
- X-ray crystallographic structure for the adduct of an activator with hCA I. Binding site interactions of activator L-Histidine with active site amino acids (PMID:16870440)
- study presents the X-ray structure of the foscarnet adduct with CA1 together with the factors governing recognition of such small molecules by a metalloenzyme active site (PMID:17314045)
- Decreased levels of carbonic anhydrase 1 isozyme is associated with type II diabetes. (PMID:17464559)
- single mutation of an amino acid not considered essential to catalysis (Phe91Asn) in carbonic anhydrase I, but is near substrate binding pocket, led to increase of catalytic activity; mutant CA I also showed higher affinity for sulfonamide inhibitors (PMID:20624682)
- Overexpression of CA1 in the synovial tissues of ankylosing spondylitis (AS) patients may promote improper calcification and bone resorption in AS. (PMID:21143847)
- A protein encoded by this locus was found to be differentially expressed in postmortem brains from patients with atypical frontotemporal lobar degeneration. (PMID:22360420)
- A significant correlation was found between positive carbonic anhydrase I staining and oral squamous cell carcinoma for more advanced clinical stage and larger tumor size, but not for positive lymph node metastasis, distal metastasis, and recurrence. (PMID:22416960)
- carbonic anhydrase I, phosphoglycerate kinase 1 and apolipoprotein A-I appeared to be the most significant variations of proteins in patients with osteopenia and osteoarthritis (PMID:22619369)
- The gene encoding CA1 is susceptible to ankylosing spondylitis and plays a role in the process of bone formation. (PMID:22838845)
- The new prognostic biomarkers GRP78, Fructose-bisphosphate Aldolase A (ALDOA), Carbonic Anhydrase I (CA1) and Peptidyl-prolyl cis-trans isomerase A or Cyclophilin A (PPIA)) provided good survival prediction for TNM stage I-IV patients. (PMID:22996014)
- may be involved in the pathogenesis of Abdominal aortic aneurysm (PMID:23557951)
- Myocardial carbonic anhydrase 1/2 activation is significantly elevated in diabetic ischemic cardiomyopathy. (PMID:24670789)
- Structure-activity relationships study showed that indolylchalcone derivatives have higher inhibitory activities than pyrido[2,3-d]pyrimidine derivatives on hCA I and hCA II. (PMID:25165709)
- CA1 is highly expressed in the sera of stage I non-small cell lung cancer patients (PMID:26232327)
- CA1 is a potential oncogene and that it contributes to abnormal cell calcification, apoptosis and migration in breast cancer. (PMID:26459317)
- We report on the competitive zinc metalation of apo-carbonic anhydrase [CA; metal-free CA (apo-CA)] in the presence of apo-metallothionein 1A domain fragments to identify domain specific determinants of zinc binding and zinc donation (PMID:26475450)
- We demonstrated that resveratrol, caffeic acid, and tannic acid in stored blood could decrease the sensitivity to oxidation of erythrocytes in vitro but did not exhibit such effects on Carbonic Anhydrase activity. (PMID:27413740)
- Here are presented solved the first crystal structures of carbonic anhydrase 1and carbonic anhydrase 2 in complex with polmacoxib, at 2.0 A and 1.8 A, respectively. (PMID:27475498)
- Neuronal carbonic anhydrase I (CA1) appears to be associated with the endoplasmic reticulum subcellular structure. (PMID:27809276)
- Anti-CA I and II antibody levels were investigated using ELISA in serum samples from 30 patients with Acute Myeloid Leukemia (AML) and 30 healthy peers. Anti-CA I and II antibody titers in the AML group were significantly higher compared with the control group (p=0.0001 and 0.018, respectively). (PMID:28270370)
- These results showed that flavonoids especially malvin and oenin effectively inhibited hCA I and II isoenzymes. (PMID:28445001)
- Discovery of potent carbonic anhydrase, acetylcholinesterase, and butyrylcholinesterase enzymes inhibitors: The new amides and thiazolidine-4-ones synthesized on an acetophenone base. (PMID:28544359)
- These six-membered carbocycles showed nice inhibitory action against AChE and human carbonic anhydrase (hCA) II and I isoforms. The hCA I, II, and AChE were efficiently inhibited by these molecules, with Ki values in the range of 6.70-35.85 nM for hCA I, 18.77-60.84 nM for hCA II, and 0.74-4.60 for AChE, respectively (PMID:28613396)
- knock-down of the CA1 mRNA in tumour cells enhances/does not change the gene expression of the extracellular matrix (ECM) proteins. (PMID:28782909)
- Results indicate that the reduced expression of the carbonic anhydrase I (CA1) protein enhances the malignant potential of prostatic (PC3) tumour cells. (PMID:30916466)
- Overexpression of CA1 mRNA and the CA I Protein in Tumor Cells Does Not Change the Gene Expression of the ECM Proteins. (PMID:31963697)
- carbonic anhydrase 1 (CA1) and CA4 were identified as potential biomarkers of Colon adenocarcinoma due to their predictive roles in diagnosis and prognosis, and the results were further confirmed by a series of analyses. (PMID:32031891)
- The Effect of Nanoparticles on the Structure and Enzymatic Activity of Human Carbonic Anhydrase I and II. (PMID:32992797)
- Carbonic anhydrase activity in the frontal lobe of human brain. (PMID:33682938)
Cross-species orthologs
18 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cahz | ENSDARG00000011166 |
| danio_rerio | ca2 | ENSDARG00000014488 |
| mus_musculus | Car1 | ENSMUSG00000027556 |
| rattus_norvegicus | Car1 | ENSRNOG00000010698 |
| drosophila_melanogaster | CAH13 | FBGN0033542 |
| drosophila_melanogaster | CAH14 | FBGN0034554 |
| drosophila_melanogaster | CAH15 | FBGN0034560 |
| drosophila_melanogaster | CAH7 | FBGN0037788 |
| drosophila_melanogaster | CAH8 | FBGN0038956 |
| drosophila_melanogaster | CAH4 | FBGN0039235 |
| drosophila_melanogaster | CAH9 | FBGN0039486 |
| drosophila_melanogaster | CAH6 | FBGN0039838 |
| drosophila_melanogaster | CAH16 | FBGN0040628 |
| drosophila_melanogaster | CAH5 | FBGN0040629 |
| drosophila_melanogaster | CARPB | FBGN0052698 |
| caenorhabditis_elegans | WBGENE00000279 | |
| caenorhabditis_elegans | WBGENE00000283 | |
| caenorhabditis_elegans | cah-6 | WBGENE00000284 |
Paralogs (14): CA11 (ENSG00000063180), CA12 (ENSG00000074410), CA2 (ENSG00000104267), CA9 (ENSG00000107159), CA14 (ENSG00000118298), CA6 (ENSG00000131686), CA10 (ENSG00000154975), CA3 (ENSG00000164879), CA4 (ENSG00000167434), CA7 (ENSG00000168748), CA5B (ENSG00000169239), CA5A (ENSG00000174990), CA8 (ENSG00000178538), CA13 (ENSG00000185015)
Protein
Protein identifiers
Carbonic anhydrase 1 — P00915 (reviewed: P00915)
Alternative names: Carbonate dehydratase I, Carbonic anhydrase B, Carbonic anhydrase I, Cyanamide hydratase CA1
All UniProt accessions (15): E5RFE7, E5RFL2, E5RG43, E5RG81, E5RGU8, E5RH81, P00915, E5RHP7, E5RHS7, E5RIF9, E5RII2, E5RJF6, E5RJI8, H0YBE2, V9HWE3
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the reversible hydration of carbon dioxide. Can hydrate cyanamide to urea.
Subcellular location. Cytoplasm.
Activity regulation. Activated by histamine, imidazole, L-adrenaline, L- and D-histidine, and L- and D-phenylalanine. Inhibited by coumarins, sulfonamide derivatives such as acetazolamide, benzenesulfonamide and derivatives (4-carboxyethylbenzene-sulfonamide, 4-carboxyethylbenzene-sulfonamide ethyl ester, 4-(acetyl-2-aminoethyl)benzene-sulfonamide, 4-aminoethylbenzene-sulfonamide), and ‘prong inhibitors’ BR15, BR17, BR22 and BR30. Activated by a short exposition to Foscarnet (phosphonoformate trisodium salt), but inhibited by a long one. Esterase activity weakly reduced by cyanamide.
Similarity. Belongs to the alpha-carbonic anhydrase family.
RefSeq proteins (7): NP_001122301, NP_001122302, NP_001122303, NP_001158302, NP_001278896, NP_001278897, NP_001729 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001148 | CA_dom | Domain |
| IPR018338 | Carbonic_anhydrase_a-class_CS | Conserved_site |
| IPR023561 | Carbonic_anhydrase_a-class | Family |
| IPR036398 | CA_dom_sf | Homologous_superfamily |
Pfam: PF00194
Enzyme classification (BRENDA):
- EC 4.2.1.1 — carbonic anhydrase (BRENDA: 178 organisms, 196 substrates, 2137 inhibitors, 263 Km, 291 kcat entries)
Substrate kinetics (BRENDA)
9 substrates with measured Km, best-characterized 9. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| CO2 | 0.012–4700 | 194 |
| 4-NITROPHENYL ACETATE | 0.0024–30.53 | 16 |
| H2CO3 | 0.434–112.7 | 16 |
| HCO3- | 9.3–37 | 4 |
| P-NITROPHENYL ACETATE | 3.86–6.8 | 4 |
| 4-NITROPHENYL PHOSPHATE | 0.935–2.195 | 2 |
| COS | 1.86 | 1 |
| HISTAMINE | 7.9 | 1 |
| CS2 | — | 0 |
Catalyzed reactions (Rhea), 2 shown:
- hydrogencarbonate + H(+) = CO2 + H2O (RHEA:10748)
- urea = cyanamide + H2O (RHEA:23056)
UniProt features (48 total): strand 16, helix 10, binding site 8, sequence variant 3, turn 3, region of interest 2, initiator methionine 1, chain 1, modified residue 1, sequence conflict 1, domain 1, active site 1
Structure
Experimental structures (PDB)
56 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7Q0D | X-RAY DIFFRACTION | 1.24 |
| 8CDX | X-RAY DIFFRACTION | 1.33 |
| 6I0J | X-RAY DIFFRACTION | 1.35 |
| 6Y00 | X-RAY DIFFRACTION | 1.37 |
| 8S4F | X-RAY DIFFRACTION | 1.39 |
| 6F3B | X-RAY DIFFRACTION | 1.4 |
| 6I0L | X-RAY DIFFRACTION | 1.4 |
| 5E2M | X-RAY DIFFRACTION | 1.41 |
| 8Q7G | X-RAY DIFFRACTION | 1.43 |
| 6XZO | X-RAY DIFFRACTION | 1.44 |
| 8CDZ | X-RAY DIFFRACTION | 1.44 |
| 7PLF | X-RAY DIFFRACTION | 1.46 |
| 9EP2 | X-RAY DIFFRACTION | 1.47 |
| 7ZL5 | X-RAY DIFFRACTION | 1.48 |
| 4WR7 | X-RAY DIFFRACTION | 1.5 |
| 6EVR | X-RAY DIFFRACTION | 1.5 |
| 6XZS | X-RAY DIFFRACTION | 1.53 |
| 6XZE | X-RAY DIFFRACTION | 1.54 |
| 2FOY | X-RAY DIFFRACTION | 1.55 |
| 2NMX | X-RAY DIFFRACTION | 1.55 |
| 6XZX | X-RAY DIFFRACTION | 1.55 |
| 8RLO | X-RAY DIFFRACTION | 1.55 |
| 1HCB | X-RAY DIFFRACTION | 1.6 |
| 6EX1 | X-RAY DIFFRACTION | 1.6 |
| 9HWN | X-RAY DIFFRACTION | 1.6 |
| 8QUN | X-RAY DIFFRACTION | 1.61 |
| 6HWZ | X-RAY DIFFRACTION | 1.64 |
| 2NN1 | X-RAY DIFFRACTION | 1.65 |
| 6XZY | X-RAY DIFFRACTION | 1.66 |
| 6G3V | X-RAY DIFFRACTION | 1.69 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P00915-F1 | 96.97 | 0.98 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 65 (proton donor/acceptor)
Ligand- & substrate-binding residues (8): 120; 200–201; 200; 201 (in variant michigan-1); 65 (in variant michigan-1); 68 (in variant michigan-1); 95; 97
Post-translational modifications (1): 2
Function
Pathways and Gene Ontology
Reactome pathways
12 pathways
| ID | Pathway |
|---|---|
| R-HSA-1237044 | Erythrocytes take up carbon dioxide and release oxygen |
| R-HSA-1247673 | Erythrocytes take up oxygen and release carbon dioxide |
| R-HSA-1475029 | Reversible hydration of carbon dioxide |
| R-HSA-8950505 | Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation |
| R-HSA-1280215 | Cytokine Signaling in Immune system |
| R-HSA-1430728 | Metabolism |
| R-HSA-1480926 | O2/CO2 exchange in erythrocytes |
| R-HSA-168256 | Immune System |
| R-HSA-382551 | Transport of small molecules |
| R-HSA-447115 | Interleukin-12 family signaling |
| R-HSA-449147 | Signaling by Interleukins |
| R-HSA-9020591 | Interleukin-12 signaling |
MSigDB gene sets: 132 (showing top):
GNF2_PRDX2, GOMF_CARBONATE_DEHYDRATASE_ACTIVITY, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, IVANOVA_HEMATOPOIESIS_LATE_PROGENITOR, RIZKI_TUMOR_INVASIVENESS_3D_DN, SHEPARD_BMYB_MORPHOLINO_DN, GOLDRATH_ANTIGEN_RESPONSE, GNF2_ANK1, OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP, RHEIN_ALL_GLUCOCORTICOID_THERAPY_UP, SHETH_LIVER_CANCER_VS_TXNIP_LOSS_PAM4, BLALOCK_ALZHEIMERS_DISEASE_UP, GOBP_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND, GNF2_SPTA1, GATA1_03
GO Biological Process (1): response to fructose (GO:0009750)
GO Molecular Function (8): arylesterase activity (GO:0004064), carbonate dehydratase activity (GO:0004089), zinc ion binding (GO:0008270), hydro-lyase activity (GO:0016836), cyanamide hydratase activity (GO:0018820), protein binding (GO:0005515), lyase activity (GO:0016829), metal ion binding (GO:0046872)
GO Cellular Component (3): cytoplasm (GO:0005737), cytosol (GO:0005829), extracellular exosome (GO:0070062)
Reactome top-level categories
Rollup of top-8 pathways:
| Category | Pathways |
|---|---|
| O2/CO2 exchange in erythrocytes | 2 |
| Metabolism | 1 |
| Interleukin-12 signaling | 1 |
| Immune System | 1 |
| Transport of small molecules | 1 |
| Signaling by Interleukins | 1 |
| Cytokine Signaling in Immune system | 1 |
| Interleukin-12 family signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| hydro-lyase activity | 2 |
| cellular anatomical structure | 2 |
| response to hexose | 1 |
| carboxylic ester hydrolase activity | 1 |
| transition metal ion binding | 1 |
| carbon-oxygen lyase activity | 1 |
| binding | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| extracellular vesicle | 1 |
Protein interactions and networks
STRING
1770 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CA1 | CYP24A1 | Q07973 | 879 |
| CA1 | ALB | P02768 | 657 |
| CA1 | ATP6V1B1 | P15313 | 638 |
| CA1 | PRDX2 | P31945 | 631 |
| CA1 | PADI2 | Q9Y2J8 | 593 |
| CA1 | SLC2A5 | P22732 | 588 |
| CA1 | KANSL3 | Q9P2N6 | 557 |
| CA1 | SORD | Q00796 | 546 |
| CA1 | ACHE | P22303 | 546 |
| CA1 | SP6 | Q3SY56 | 542 |
| CA1 | ENO1 | P06733 | 534 |
| CA1 | MAFK | O60675 | 497 |
| CA1 | TG | P01266 | 492 |
| CA1 | BACH2 | Q9BYV9 | 491 |
| CA1 | CA6 | P23280 | 491 |
IntAct
15 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CA1 | TFCP2 | psi-mi:“MI:0915”(physical association) | 0.720 |
| CA1 | E7 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CA1 | HSD17B7 | psi-mi:“MI:0915”(physical association) | 0.370 |
| MAPK6 | CA1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| UPF3A | CASC3 | psi-mi:“MI:0914”(association) | 0.350 |
| ARMH1 | TUSC2 | psi-mi:“MI:0914”(association) | 0.350 |
| KCNG4 | CA1 | psi-mi:“MI:0914”(association) | 0.350 |
| NTF3 | CA1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (15): TFCP2 (Two-hybrid), TFCP2 (Two-hybrid), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Affinity Capture-MS), CA1 (Two-hybrid), CA1 (Co-fractionation), CA1 (Co-fractionation), CA1 (Two-hybrid), HSD17B7 (Two-hybrid)
ESM2 similar proteins: B0BNN3, O76206, P00441, P00445, P00915, P00916, P00917, P00918, P00919, P00920, P00921, P00922, P07450, P07451, P07452, P07630, P13634, P14141, P16015, P27139, P28755, P35217, P43166, P48282, P48284, P60052, P82205, P83299, Q0IIW3, Q1LZA1, Q27504, Q3SZX4, Q42961, Q5S1S4, Q6C662, Q7M316, Q7M317, Q8HXQ0, Q8HXQ1, Q8HXQ2
Diamond homologs: A0A7H0DN92, A0JN41, B0BNN3, O57211, P00915, P00916, P00917, P00918, P00919, P00920, P00921, P04195, P07450, P07451, P07452, P07630, P0DSY1, P0DSY2, P13634, P14141, P16015, P20508, P23470, P23471, P23589, P27139, P35217, P35218, P43165, P43166, P48282, P48283, P61215, P83299, Q05909, Q1LZA1, Q3SZX4, Q5R4U0, Q5S1S4, Q66HG6
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
47 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 0 |
| Uncertain significance | 33 |
| Likely benign | 2 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1341980 | GRCh37/hg19 8q21.11-21.3(chr8:75904944-87097083)x1 | Pathogenic |
| 17605 | NM_001128831.4(CA1):c.760G>C (p.Gly254Arg) | Pathogenic |
| 17606 | NM_001128831.4(CA1):c.740G>A (p.Arg247His) | Pathogenic |
| 60377 | GRCh38/hg38 8q21.11-21.2(chr8:73879385-85611466)x1 | Pathogenic |
SpliceAI
1055 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 8:85328674:CAG:C | acceptor_gain | 1.0000 |
| 8:85329714:T:A | donor_gain | 1.0000 |
| 8:85329840:TTGCC:T | acceptor_gain | 1.0000 |
| 8:85329841:TGCC:T | acceptor_gain | 1.0000 |
| 8:85329843:CC:C | acceptor_gain | 1.0000 |
| 8:85329843:CCCTG:C | acceptor_loss | 1.0000 |
| 8:85329844:CC:C | acceptor_gain | 1.0000 |
| 8:85329845:C:CC | acceptor_gain | 1.0000 |
| 8:85329845:CT:C | acceptor_loss | 1.0000 |
| 8:85329846:T:C | acceptor_loss | 1.0000 |
| 8:85332553:C:CG | acceptor_loss | 1.0000 |
| 8:85332554:T:A | acceptor_loss | 1.0000 |
| 8:85333520:CTCA:C | donor_loss | 1.0000 |
| 8:85333521:TCA:T | donor_loss | 1.0000 |
| 8:85333522:CACC:C | donor_loss | 1.0000 |
| 8:85333523:A:T | donor_loss | 1.0000 |
| 8:85333524:C:CG | donor_loss | 1.0000 |
| 8:85333621:C:CC | acceptor_gain | 1.0000 |
| 8:85337064:C:CC | acceptor_gain | 1.0000 |
| 8:85338246:GCTCA:G | donor_loss | 1.0000 |
| 8:85338247:CTCA:C | donor_loss | 1.0000 |
| 8:85338248:TCACC:T | donor_loss | 1.0000 |
| 8:85338249:CAC:C | donor_loss | 1.0000 |
| 8:85338250:A:C | donor_loss | 1.0000 |
| 8:85328672:GCCAG:G | acceptor_gain | 0.9900 |
| 8:85328673:CCAG:C | acceptor_gain | 0.9900 |
| 8:85328673:CCAGC:C | acceptor_gain | 0.9900 |
| 8:85328674:CAGC:C | acceptor_gain | 0.9900 |
| 8:85328676:GC:G | acceptor_loss | 0.9900 |
| 8:85328677:C:CA | acceptor_loss | 0.9900 |
AlphaMissense
1724 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 8:85328607:G:T | R247S | 0.996 |
| 8:85338438:A:G | W17R | 0.995 |
| 8:85338438:A:T | W17R | 0.995 |
| 8:85328581:T:A | R255S | 0.994 |
| 8:85328581:T:G | R255S | 0.994 |
| 8:85329730:A:G | W210R | 0.994 |
| 8:85329730:A:T | W210R | 0.994 |
| 8:85337007:A:G | W98R | 0.994 |
| 8:85337007:A:T | W98R | 0.994 |
| 8:85338436:C:A | W17C | 0.994 |
| 8:85338436:C:G | W17C | 0.994 |
| 8:85336979:T:A | E107V | 0.993 |
| 8:85338395:G:T | P31H | 0.993 |
| 8:85329768:C:T | G197D | 0.992 |
| 8:85337005:C:A | W98C | 0.992 |
| 8:85337005:C:G | W98C | 0.992 |
| 8:85338392:A:T | V32D | 0.992 |
| 8:85333619:A:G | L119P | 0.991 |
| 8:85338301:A:C | N62K | 0.991 |
| 8:85338301:A:T | N62K | 0.991 |
| 8:85329766:A:G | S198P | 0.990 |
| 8:85329782:G:C | F192L | 0.990 |
| 8:85329782:G:T | F192L | 0.990 |
| 8:85329784:A:G | F192L | 0.990 |
| 8:85337010:G:C | H97D | 0.990 |
| 8:85328582:C:G | R255T | 0.989 |
| 8:85329781:A:G | W193R | 0.989 |
| 8:85329781:A:T | W193R | 0.989 |
| 8:85328606:C:G | R247P | 0.988 |
| 8:85328663:C:G | R228P | 0.988 |
dbSNP variants (sampled 300 via entrez): RS1000013899 (8:85344466 G>A,C), RS1000030142 (8:85337778 A>G,T), RS1000051385 (8:85372169 C>T), RS1000162645 (8:85351033 C>T), RS1000219995 (8:85351539 C>T), RS1000318601 (8:85376796 G>A), RS1000320060 (8:85344165 T>A), RS1000342921 (8:85358184 A>G), RS1000371204 (8:85378737 T>A), RS1000389408 (8:85358502 C>A,G), RS1000423140 (8:85351825 G>C), RS1000503079 (8:85349418 T>A,G), RS1000532977 (8:85327586 G>C), RS1000632456 (8:85356550 C>T), RS1000638020 (8:85367092 T>C)
Disease associations
OMIM: gene MIM:114800 | disease phenotypes: MIM:614230
GenCC curated gene-disease
Mondo (4): chromosome 8q21.11 deletion syndrome (MONDO:0013646), metabolic acidosis (MONDO:0000440), renal tubular acidosis (MONDO:0001909), rickets (MONDO:0005520)
Orphanet (1): 8q21.11 microdeletion syndrome (Orphanet:284160)
HPO phenotypes
1 total (1 of 1 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0002748 | Rickets |
GWAS associations
15 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002040_1 | Blood trace element (Zn levels) | 6.000000e-12 |
| GCST002934_16 | Zinc levels | 6.000000e-06 |
| GCST004611_37 | High light scatter reticulocyte count | 5.000000e-11 |
| GCST004612_44 | High light scatter reticulocyte percentage of red cells | 2.000000e-10 |
| GCST004619_91 | Reticulocyte fraction of red cells | 1.000000e-09 |
| GCST004622_17 | Reticulocyte count | 2.000000e-10 |
| GCST006585_2230 | Blood protein levels | 2.000000e-09 |
| GCST90002385_405 | High light scatter reticulocyte count | 4.000000e-37 |
| GCST90002386_483 | High light scatter reticulocyte percentage of red cells | 3.000000e-35 |
| GCST90002391_187 | Mean corpuscular hemoglobin concentration | 5.000000e-24 |
| GCST90002392_586 | Mean corpuscular volume | 5.000000e-15 |
| GCST90002396_430 | Mean reticulocyte volume | 1.000000e-30 |
| GCST90002397_341 | Mean spheric corpuscular volume | 3.000000e-20 |
| GCST90002405_514 | Reticulocyte count | 7.000000e-34 |
| GCST90002406_304 | Reticulocyte fraction of red cells | 9.000000e-30 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007986 | reticulocyte count |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0010701 | mean reticulocyte volume |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D000141 | Acidosis, Renal Tubular | C12.050.351.968.419.815.093; C12.200.777.419.815.093; C12.950.419.815.093; C16.320.831.093; C18.452.076.176.210 |
| D012279 | Rickets | C05.116.198.816; C18.452.104.816; C18.452.174.845; C18.654.521.500.133.770.734 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2095180 (PROTEIN FAMILY), CHEMBL261 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
70 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 5,536,680 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL19 | METHAZOLAMIDE | 4 | 65 |
| CHEMBL20 | ACETAZOLAMIDE | 4 | 28,768 |
| CHEMBL750 | ZONISAMIDE | 4 | 16,649 |
| CHEMBL1054 | TRICHLORMETHIAZIDE | 4 | 11,619 |
| CHEMBL1055 | CHLORTHALIDONE | 4 | 20,442 |
| CHEMBL112 | ACETAMINOPHEN | 4 | 157,242 |
| CHEMBL1161681 | NITROUS ACID | 4 | 286,808 |
| CHEMBL118 | CELECOXIB | 4 | 112,844 |
| CHEMBL1235452 | SULFUR | 4 | 2,163,993 |
| CHEMBL1286 | LEVETIRACETAM | 4 | 13,997 |
| CHEMBL1354 | SODIUM ACETATE | 4 | 594,259 |
| CHEMBL14060 | PHENOL | 4 | 1,871,332 |
| CHEMBL17 | DICHLORPHENAMIDE | 4 | 9,022 |
| CHEMBL18 | ETHOXZOLAMIDE | 4 | 3,042 |
| CHEMBL21 | SULFANILAMIDE | 4 | 153,075 |
| CHEMBL2105581 | VERALIPRIDE | 4 | 1,165 |
| CHEMBL218490 | DORZOLAMIDE | 4 | 10,216 |
| CHEMBL220491 | BRINZOLAMIDE | 4 | 8,355 |
| CHEMBL220492 | TOPIRAMATE | 4 | 35,160 |
| CHEMBL255863 | NILOTINIB | 4 | 38,627 |
| CHEMBL26 | SULPIRIDE | 4 | |
| CHEMBL325041 | BORTEZOMIB | 4 | |
| CHEMBL328560 | SULTHIAME | 4 | |
| CHEMBL35 | FUROSEMIDE | 4 | |
| CHEMBL406 | INDAPAMIDE | 4 | |
| CHEMBL419 | MAFENIDE | 4 | |
| CHEMBL421 | SULFASALAZINE | 4 | |
| CHEMBL424 | SALICYLIC ACID | 4 | |
| CHEMBL435 | HYDROCHLOROTHIAZIDE | 4 | |
| CHEMBL443052 | TAVABOROLE | 4 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Carbonic anhydrases
Most potent curated ligand interactions (18 total), top 18:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| benzolamide | Inhibition | 7.82 | pKi |
| ethoxzolamide | Inhibition | 7.6 | pKi |
| methocarbamol | Inhibition | 7.6 | pKi |
| indisulam | Inhibition | 7.51 | pKi |
| methazolamide | Inhibition | 7.48 | pKi |
| zonisamide | Inhibition | 7.25 | pKi |
| diclofenamide | Inhibition | 7.13 | pKi |
| compound 11 [PMID: 41150938] | Inhibition | 6.84 | pKi |
| acetazolamide | Inhibition | 6.6 | pKi |
| topiramate | Inhibition | 6.6 | pKi |
| chlorthalidone | Inhibition | 6.46 | pKi |
| compound 5a [PMID: 31287314] | Inhibition | 6.07 | pKi |
| compound 5b [PMID: 31287314] | Inhibition | 6.05 | pKi |
| sulpiride | Inhibition | 5.92 | pKi |
| gallic acid | Inhibition | 5.5 | pKi |
| SLC-0111 | Inhibition | 5.29 | pKi |
| brinzolamide | Inhibition | 4.35 | pKi |
| dorzolamide | Inhibition | 4.3 | pKi |
Binding affinities (BindingDB)
614 measured of 806 human assays (901 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| 3-(butylamino)-4-phenoxy-5-sulfamoylbenzoic acid | EC50 | 0.0469 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(2-bromophenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7k) | KI | 0.405 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(4-bromophenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7i) | KI | 0.442 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(3-methoxyphenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7b) | KI | 0.469 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(4-chlorophenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7f) | KI | 0.475 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(3-bromophenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7j) | KI | 0.501 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(4-methoxyphenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7a) | KI | 0.513 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(3-chlorophenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7g) | KI | 0.518 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(m-tolyl)acryloyl)phenyl)-3a,4,7,7atetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7d) | KI | 0.523 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(o-tolyl)acryloyl)phenyl)-3a,4,7,7atetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7e) | KI | 0.529 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(pyridin-4-yl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7n) | KI | 0.549 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(furan-2-yl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7l) | KI | 0.595 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(p-tolyl)acryloyl)phenyl)-3a,4,7,7atetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7c) | IC50 | 0.597 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(2-chlorophenyl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7h) | KI | 0.603 nM |
| (3aR,4S,7R,7aS)-2-(4-((E)-3-(thiophen-2-yl)acryloyl)phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione (7m) | KI | 0.636 nM |
| N-Pentafluorophenylsulfonyl-N-4-nitrobenzyl-glycine hydroxamate | KI | 0.7 nM |
| N-hydroxy-2-{(4-nitrophenyl)methylsulfonamido}propanamide | KI | 0.7 nM |
| 2-[benzyl(2,3,4,5,6-pentafluorobenzene)sulfonamido]-N-hydroxy-3-methylbutanamide | KI | 0.8 nM |
| 2-[benzyl(2,3,4,5,6-pentafluorobenzene)sulfonamido]-N-hydroxy-4-methylpentanamide | KI | 0.8 nM |
| N-hydroxy-2-{(2-nitrophenyl)methylsulfonamido}propanamide | KI | 0.8 nM |
| 2-[benzyl(2,3,4,5,6-pentafluorobenzene)sulfonamido]-N-hydroxypropanamide | KI | 0.9 nM |
| 2-N-(4-amino-3-bromo-5-fluorobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 1 nM |
| 5-(4-Amino-3,5-dibromobenzenesulfonamido)-1,3,4-thiadiazole-2-sulfonamide | KI | 1 nM |
| 5-(4-Amino-3,5-dichlorobenzenesulfonamido)-1,3,4-thiadiazole-2-sulfonamide | KI | 1.1 nM |
| 5-{[(4-amino-3-bromo-5-chlorophenyl)sulfonyl]amino}-1,3,4-thiadiazole-2-sulfonamide | KI | 1.3 nM |
| N-hydroxy-2-{(2-nitrophenyl)methylsulfonamido}acetamide | KI | 1.4 nM |
| N-hydroxy-2-{(4-nitrophenyl)methylsulfonamido}propanamide | KI | 1.4 nM |
| 2-N-(4-amino-3-chloro-5-fluorobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 1.4 nM |
| 2-[benzyl(2,3,4,5,6-pentafluorobenzene)sulfonamido]-N-hydroxyacetamide | KI | 1.5 nM |
| N-hydroxy-2-{(4-nitrophenyl)methylsulfonamido}acetamide | KI | 1.5 nM |
| 2-{(2-chlorophenyl)methylsulfonamido}-N-hydroxypropanamide | KI | 1.5 nM |
| 2-N-(4-amino-3-chloro-5-iodobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 1.6 nM |
| 2-Chloro-4-{[2-(methylthio)-1H-benzimidazol-1-yl]acetyl}-benzenesulfonamide (2j) | KD | 1.67 nM |
| 2-N-(4-amino-3-fluoro-5-iodobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 1.7 nM |
| 2-[benzyl(1,1,2,2,3,3,4,4,4-nonafluorobutane)sulfonamido]-N-hydroxy-4-methylpentanamide | KI | 1.9 nM |
| 5-(4-Amino-3-bromobenzenesulfonamido)-1,3,4-thiadiazole-2-sulfonamide | KI | 1.9 nM |
| 5-{[(4-amino-3-bromo-5-iodophenyl)sulfonyl]amino}-1,3,4-thiadiazole-2-sulfonamide | KI | 1.9 nM |
| 2-N-(4-amino-3-iodobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 2.1 nM |
| 5-(4-Amino-3,5-diiodobenzenesulfonamido)-1,3,4-thiadiazole-2-sulfonamide | KI | 2.1 nM |
| 2-[benzyl(1,1,2,2,3,3,4,4,4-nonafluorobutane)sulfonamido]-N-hydroxy-3-methylbutanamide | KI | 2.4 nM |
| 2-N-(4-amino-3-chlorobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 2.5 nM |
| 2-Chloro-4-[(2-propyl-1H-benzimidazol-1-yl)acetyl]benzenesulfonamide (2f) | KD | 2.86 nM |
| N-hydroxy-2-{(2-nitrophenyl)methylsulfonamido}propanamide | KI | 2.9 nM |
| Sulfonamide, 8 | KI | 3 nM |
| 1-N-[5-Sulfamoyl-1,3,4-thiadiazol-2-yl-(aminosulfonyl-4-phenyl)]-2,3,4,6-tetramethylpyridinium perchlorate | KI | 3 nM |
| 2,3,6-trimethyl-4-phenyl-1-{4-[(5-sulfamoyl-1,3,4-thiadiazol-2-yl)sulfamoyl]phenyl}-1-pyridin-1-ylium perchlorate | KI | 3 nM |
| 2-N-(4-amino-3-fluorobenzene)-1,3,4-thiadiazole-2,5-disulfonamide | KI | 3.1 nM |
| 2-[benzyl(1,1,2,2,3,3,4,4,4-nonafluorobutane)sulfonamido]-N-hydroxypropanamide | KI | 3.2 nM |
| 4-[(2-Butyl-1H-benzimidazol-1-yl)acetyl]-2-chlorobenzenesulfonamide (2g) | KD | 3.33 nM |
| 4-{[2-(Methylsulfanyl)-1H-benzimidazol-1-yl]acetyl}benzenesulfonamide (1j) | KD | 3.57 nM |
ChEMBL bioactivities
6100 potent at pChembl≥5 of 6100 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 11.00 | Ki | 0.01 | nM | CHEMBL3608873 |
| 11.00 | Ki | 0.01 | nM | CHEMBL3608874 |
| 10.54 | Kd | 0.029 | nM | CHEMBL3797893 |
| 10.48 | Kd | 0.033 | nM | CHEMBL2333418 |
| 10.34 | Ki | 0.0459 | nM | CHEMBL3585779 |
| 10.32 | Ki | 0.0483 | nM | CHEMBL3585777 |
| 10.30 | Kd | 0.05 | nM | CHEMBL2333397 |
| 10.30 | Kd | 0.05 | nM | CHEMBL2333816 |
| 10.30 | Ki | 0.05 | nM | CHEMBL3608890 |
| 10.17 | Kd | 0.067 | nM | CHEMBL2333409 |
| 10.16 | Ki | 0.069 | nM | CHEMBL6143639 |
| 10.05 | Ki | 0.09 | nM | CHEMBL3608894 |
| 10.00 | Kd | 0.1 | nM | CHEMBL2333402 |
| 10.00 | Kd | 0.1 | nM | CHEMBL2333814 |
| 9.96 | Kd | 0.11 | nM | CHEMBL2333416 |
| 9.92 | Ki | 0.12 | nM | CHEMBL4100496 |
| 9.92 | Ki | 0.12 | nM | CHEMBL4073678 |
| 9.90 | Ki | 0.1271 | nM | CHEMBL3585776 |
| 9.90 | Ki | 0.127 | nM | CHEMBL3585775 |
| 9.89 | Kd | 0.13 | nM | CHEMBL2333408 |
| 9.89 | Kd | 0.13 | nM | CHEMBL2333815 |
| 9.86 | Ki | 0.1397 | nM | CHEMBL3585778 |
| 9.85 | IC50 | 0.14 | nM | CHEMBL4100496 |
| 9.85 | Kd | 0.14 | nM | CHEMBL4577993 |
| 9.82 | Kd | 0.15 | nM | CHEMBL4560953 |
| 9.82 | Kd | 0.15 | nM | CHEMBL4553790 |
| 9.77 | Kd | 0.17 | nM | CHEMBL2333405 |
| 9.72 | Kd | 0.19 | nM | CHEMBL4516072 |
| 9.70 | Kd | 0.2 | nM | CHEMBL2333406 |
| 9.70 | Kd | 0.2 | nM | CHEMBL2333404 |
| 9.70 | Kd | 0.2 | nM | CHEMBL2333419 |
| 9.70 | Kd | 0.2 | nM | CHEMBL2333417 |
| 9.70 | Ki | 0.2 | nM | CHEMBL4552380 |
| 9.70 | Ki | 0.2 | nM | CHEMBL4460315 |
| 9.70 | Ki | 0.2 | nM | CHEMBL4434661 |
| 9.70 | Ki | 0.2 | nM | CHEMBL282157 |
| 9.68 | IC50 | 0.21 | nM | CHEMBL4073678 |
| 9.66 | Kd | 0.22 | nM | CHEMBL4441652 |
| 9.64 | Kd | 0.23 | nM | CHEMBL4567916 |
| 9.64 | Kd | 0.23 | nM | CHEMBL4462447 |
| 9.62 | Kd | 0.24 | nM | CHEMBL4448119 |
| 9.60 | Kd | 0.25 | nM | CHEMBL2333407 |
| 9.60 | Kd | 0.25 | nM | CHEMBL2333403 |
| 9.60 | Kd | 0.25 | nM | CHEMBL4587295 |
| 9.56 | Ki | 0.2747 | nM | CHEMBL3585780 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL4098116 |
| 9.54 | IC50 | 0.29 | nM | CHEMBL4082551 |
| 9.54 | IC50 | 0.29 | nM | CHEMBL4097972 |
| 9.54 | IC50 | 0.288 | nM | CHEMBL4099344 |
| 9.54 | Kd | 0.29 | nM | CHEMBL4516858 |
PubChem BioAssay actives
4400 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| benzyl N-[1-(3,4-dimethoxyphenyl)ethylsulfamoyl]carbamate | 1231566: Inhibition of esterase activity of carbonic anhydrase 1 in human erythrocytes using PNF as substrate by spectrophotometer analysis | ki | <0.0001 | uM |
| benzyl N-[1-(2,6-dimethoxyphenyl)ethylsulfamoyl]carbamate | 1231566: Inhibition of esterase activity of carbonic anhydrase 1 in human erythrocytes using PNF as substrate by spectrophotometer analysis | ki | <0.0001 | uM |
| 4-[2-(pyrrolidine-1-carbonyl)-1,3-oxazol-5-yl]benzenesulfonamide | 1242115: Inhibition of human recombinant carbonic anhydrase 1 preincubated for 15 mins by stopped flow CO2 hydration method | ki | <0.0001 | uM |
| 4-[2-(morpholine-4-carbonyl)-1,3-oxazol-5-yl]benzenesulfonamide | 1242115: Inhibition of human recombinant carbonic anhydrase 1 preincubated for 15 mins by stopped flow CO2 hydration method | ki | <0.0001 | uM |
| benzyl N-[1-(2-methoxyphenyl)ethylsulfamoyl]carbamate | 1231566: Inhibition of esterase activity of carbonic anhydrase 1 in human erythrocytes using PNF as substrate by spectrophotometer analysis | ki | 0.0001 | uM |
| benzyl N-[1-(4-methoxyphenyl)ethylsulfamoyl]carbamate | 1231566: Inhibition of esterase activity of carbonic anhydrase 1 in human erythrocytes using PNF as substrate by spectrophotometer analysis | ki | 0.0001 | uM |
| benzyl N-[1-(2,5-dimethoxyphenyl)ethylsulfamoyl]carbamate | 1231566: Inhibition of esterase activity of carbonic anhydrase 1 in human erythrocytes using PNF as substrate by spectrophotometer analysis | ki | 0.0001 | uM |
| 4-(2-methyl-1,3-oxazol-5-yl)thiophene-2-sulfonamide | 1242115: Inhibition of human recombinant carbonic anhydrase 1 preincubated for 15 mins by stopped flow CO2 hydration method | ki | 0.0001 | uM |
| 4-[2-(morpholine-4-carbonyl)-1,3-oxazol-5-yl]thiophene-2-sulfonamide | 1242115: Inhibition of human recombinant carbonic anhydrase 1 preincubated for 15 mins by stopped flow CO2 hydration method | ki | 0.0001 | uM |
| 2-[(5-anilino-1,3,4-thiadiazol-2-yl)sulfanyl]-N-[(E)-[5-(2-nitrophenyl)furan-2-yl]methylideneamino]acetamide | 1453371: Non-competitive inhibition of carbonic anhydrase-1 in human erythrocyte membranes assessed as reduction in H+ release using CO2 as substrate by Lineweaver-Burk plot analysis | ki | 0.0001 | uM |
| 2-[(5-anilino-1,3,4-thiadiazol-2-yl)sulfanyl]-N-[(E)-[5-(4-chlorophenyl)furan-2-yl]methylideneamino]acetamide | 1453368: Inhibition of carbonic anhydrase-1 in human erythrocyte membranes assessed as reduction in H+ release using CO2 as substrate by bromine thymol blue indicator based assay | ic50 | 0.0001 | uM |
| 1-(2-bromophenyl)-5-oxo-N-(4-sulfamoylphenyl)pyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0001 | uM |
| 1-(3,5-dimethyl-4-sulfamoylphenyl)-N-[(E)-(4-nitrophenyl)methylideneamino]-5-oxopyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0001 | uM |
| 1-[[1-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carbonyl]amino]-3-phenylthiourea | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0001 | uM |
| 4-[1-[(2R)-1-(3-azabicyclo[3.2.2]nonan-3-yl)-3-methyl-1-oxobutan-2-yl]triazol-4-yl]benzenesulfonamide | 1557414: Inhibition of carbonic anhydrase (unknown origin) | ki | 0.0002 | uM |
| methyl 1-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carboxylate | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0002 | uM |
| N-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxo-1-phenylpyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0002 | uM |
| 1-(3-bromophenyl)-5-oxo-N-(4-sulfamoylphenyl)pyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0002 | uM |
| (2R)-3-phenyl-2-[4-(4-sulfamoylphenyl)triazol-1-yl]-N-(2-thiophen-3-ylethyl)propanamide | 1557414: Inhibition of carbonic anhydrase (unknown origin) | ki | 0.0002 | uM |
| 4-[4-(3,5-dimethylpyrazole-1-carbonyl)-2-oxopyrrolidin-1-yl]-2,6-dimethylbenzenesulfonamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0002 | uM |
| 1-methoxy-2-[1-(sulfamoylamino)ethyl]benzene | 1231566: Inhibition of esterase activity of carbonic anhydrase 1 in human erythrocytes using PNF as substrate by spectrophotometer analysis | ki | 0.0003 | uM |
| 2-[(5-anilino-1,3,4-thiadiazol-2-yl)sulfanyl]-N-[(E)-[5-(4-nitrophenyl)furan-2-yl]methylideneamino]acetamide | 1453368: Inhibition of carbonic anhydrase-1 in human erythrocyte membranes assessed as reduction in H+ release using CO2 as substrate by bromine thymol blue indicator based assay | ic50 | 0.0003 | uM |
| [2-(1,3-benzodioxol-5-ylmethylamino)-2-oxoethyl] N-morpholin-4-ylcarbamodithioate | 1459104: Inhibition of human erythrocyte carbonic anhydrase-1 | ic50 | 0.0003 | uM |
| 2-[(5-anilino-1,3,4-thiadiazol-2-yl)sulfanyl]-N-[(E)-[5-(2,4-dichlorophenyl)furan-2-yl]methylideneamino]acetamide | 1453368: Inhibition of carbonic anhydrase-1 in human erythrocyte membranes assessed as reduction in H+ release using CO2 as substrate by bromine thymol blue indicator based assay | ic50 | 0.0003 | uM |
| 2-[(5-anilino-1,3,4-thiadiazol-2-yl)sulfanyl]-N-[(E)-[5-(4-chloro-2-nitrophenyl)furan-2-yl]methylideneamino]acetamide | 1453368: Inhibition of carbonic anhydrase-1 in human erythrocyte membranes assessed as reduction in H+ release using CO2 as substrate by bromine thymol blue indicator based assay | ic50 | 0.0003 | uM |
| [2-(1,3-benzodioxol-5-ylmethylamino)-2-oxoethyl] N-thiomorpholin-4-ylcarbamodithioate | 1459104: Inhibition of human erythrocyte carbonic anhydrase-1 | ic50 | 0.0003 | uM |
| N-[(E)-benzylideneamino]-1-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0003 | uM |
| 3-chloro-4-[4-(3,5-dimethylpyrazole-1-carbonyl)-2-oxopyrrolidin-1-yl]-2,6-dimethylbenzenesulfonamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0003 | uM |
| 1-(3,5-dimethyl-4-sulfamoylphenyl)-N-[(E)-(4-methoxyphenyl)methylideneamino]-5-oxopyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0003 | uM |
| N-[(E)-(4-chlorophenyl)methylideneamino]-1-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0003 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(4-methoxyphenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(3-methoxyphenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(4-methylphenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(3-methylphenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(2-methylphenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(4-chlorophenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(3-chlorophenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1S,2R,6S,7R)-4-[4-[(E)-3-(2-chlorophenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(4-bromophenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1802576: Esterase Activity Assay from Article 10.1016/j.bioorg.2016.12.001: “Synthesis, characterization, anticancer, antimicrobial and carbonic anhydrase inhibition profiles of novel (3aR,4S,7R,7aS)-2-(4-((E)-3-(3-aryl)acryloyl) phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione derivatives.” | ki | 0.0004 | uM |
| (1S,2R,6S,7R)-4-[4-[(E)-3-(3-bromophenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1R,2S,6R,7S)-4-[4-[(E)-3-(2-bromophenyl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1802576: Esterase Activity Assay from Article 10.1016/j.bioorg.2016.12.001: “Synthesis, characterization, anticancer, antimicrobial and carbonic anhydrase inhibition profiles of novel (3aR,4S,7R,7aS)-2-(4-((E)-3-(3-aryl)acryloyl) phenyl)-3a,4,7,7a-tetrahydro-1H-4,7-methanoisoindole-1,3(2H)-dione derivatives.” | ki | 0.0004 | uM |
| (1S,2R,6S,7R)-4-[4-[(E)-3-(furan-2-yl)prop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1S,2R,6S,7R)-4-[4-[(E)-3-thiophen-2-ylprop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| (1S,2R,6S,7R)-4-[4-[(E)-3-pyridin-4-ylprop-2-enoyl]phenyl]-4-azatricyclo[5.2.1.02,6]dec-8-ene-3,5-dione | 1849566: Binding affinity to human CA1 assessed as inhibition constant using 4-nitrophenylacetate as substrate by spectrophotometrical analysis | ki | 0.0004 | uM |
| 2-[(5-anilino-1,3,4-thiadiazol-2-yl)sulfanyl]-N-[(E)-[5-(3,4-dichlorophenyl)furan-2-yl]methylideneamino]acetamide | 1453368: Inhibition of carbonic anhydrase-1 in human erythrocyte membranes assessed as reduction in H+ release using CO2 as substrate by bromine thymol blue indicator based assay | ic50 | 0.0004 | uM |
| 4-chloro-2-(cyclooctylamino)-5-sulfamoylbenzoic acid | 1361381: Binding affinity to recombinant human carbonic anhydrase 1 expressed in Escherichia coli assessed as intrinsic Kd in presence of ANS by fluorescent thermal shift assay | kd | 0.0004 | uM |
| N-[(E)-(4-bromophenyl)methylideneamino]-1-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0004 | uM |
| N-(3,5-dimethylpyrazol-1-yl)-1-(3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0004 | uM |
| 1-[[1-(2-chloro-3,5-dimethyl-4-sulfamoylphenyl)-5-oxopyrrolidine-3-carbonyl]amino]-3-phenylthiourea | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0004 | uM |
| N-[(E)-benzylideneamino]-5-oxo-1-(4-sulfamoylphenyl)pyrrolidine-3-carboxamide | 1515314: Binding affinity to recombinant human CA1 assessed as intrinsic dissociation constant by DSF-based fluorescence thermal shift assay | kd | 0.0004 | uM |
CTD chemical–gene interactions
75 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Acetazolamide | affects binding, decreases activity, decreases reaction | 15 |
| sodium arsenite | decreases expression, increases expression | 2 |
| Pyrimidines | decreases activity | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| 3-methylpentyl(4-sulphamoylphenyl)carbamate | decreases activity | 1 |
| thiosemicarbazide | decreases activity | 1 |
| sulfamic acid | decreases activity | 1 |
| oryzalin | affects binding, decreases activity | 1 |
| silychristin | decreases activity | 1 |
| cobaltous chloride | decreases expression | 1 |
| chloric acid | decreases activity | 1 |
| sodium metasilicate | decreases activity | 1 |
| chalcone epoxide | affects binding, decreases activity | 1 |
| coumarin | decreases activity | 1 |
| 2,6-di-tert-butylphenol | decreases activity | 1 |
| 2,6-xylenol | decreases activity | 1 |
| potassium periodate | decreases activity | 1 |
| 1,2,4-triazole | decreases activity | 1 |
| tungstate | decreases activity | 1 |
| pelargonidin-3-glucoside | decreases activity | 1 |
| candesartan | decreases activity | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| vanillin | decreases activity | 1 |
| N-(3-chloro-7-indolyl)-1,4-benzenedisulphonamide | affects binding, decreases activity | 1 |
| malvidin-3-glucoside | decreases activity | 1 |
| perchlorate | decreases activity | 1 |
| malvin | decreases activity | 1 |
| Sulfanilamide | decreases activity | 1 |
| Rosiglitazone | affects expression | 1 |
| Topiramate | affects binding, decreases activity | 1 |
ChEMBL screening assays
886 unique, capped per target: 852 binding, 32 admet, 2 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL3386760 | Binding | Inhibition of carbonic anhydrase (unknown origin) | Substituted thieno[2,3-b]thiophenes and related congeners: Synthesis, β-glucuronidase inhibition activity, crystal structure, and POM analyses. — Bioorg Med Chem |
| CHEMBL4013794 | ADMET | Inhibition of recombinant human carbonic anhydrase 1 preincubated for 15 mins prior to testing by phenol red based stopped-flow CO2 hydration assay | 3-Hydroxy-1H-quinazoline-2,4-dione as a New Scaffold To Develop Potent and Selective Inhibitors of the Tumor-Associated Carbonic Anhydrases IX and XII. — J Med Chem |
| CHEMBL834886 | Functional | Inhibition constant against human recombinant carbonic anhydrase I | Carbonic anhydrase inhibitors. Synthesis and inhibition of cytosolic/tumor-associated carbonic anhydrase isozymes I, II, and IX with boron-containing sulfonamides, sulfamides, and sulfamates: toward agents for boron neutron capture therapy of hypoxic tumors. — Bioorg Med Chem Lett |
Cellosaurus cell lines
4 cell lines: 4 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_IX35 | GM02744 | Transformed cell line | Female |
| CVCL_IX36 | GM02745 | Transformed cell line | Male |
| CVCL_N002 | GM02742 | Transformed cell line | Male |
| CVCL_N003 | GM02743 | Transformed cell line | Female |
Clinical trials (associated diseases)
117 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT03035812 | PHASE4 | COMPLETED | Alkalinization by Urologists & Nephrologists |
| NCT03846258 | PHASE4 | WITHDRAWN | High Versus Low Bicarbonate Bath in Critically-ill Patients Receiving Continuous Renal Replacement Therapy |
| NCT05005793 | PHASE4 | RECRUITING | Effect of Alkali Therapy on Vascular and Graft Function in Kidney Transplant Recipients |
| NCT07424625 | PHASE4 | NOT_YET_RECRUITING | A Study of Tris-Hydroxymethyl Aminomethane (THAM) Versus Sodium Bicarbonate in Cardiac Surgical Patients |
| NCT07464431 | PHASE4 | NOT_YET_RECRUITING | Sodium Bicarbonate for Critically Ill Patients With Metabolic Acidosis and Acute Kidney Injury |
| NCT00949832 | PHASE4 | COMPLETED | Vitamin D and Genetics in Nutritional Rickets |
| NCT01067898 | PHASE4 | COMPLETED | A Study on Oral Vitamin D Megadoses |
| NCT01578434 | PHASE4 | COMPLETED | Role of Calcium And Vitamin D In Nutritional Rickets And It’s Management |
| NCT03403933 | PHASE4 | COMPLETED | Vitamin D Supplementation on in Major Orthopedic Surgery |
| NCT01640119 | PHASE3 | UNKNOWN | Correction of Metabolic Acidosis in End Stage Renal Disease (ESRD) |
| NCT02476253 | PHASE3 | COMPLETED | Sodium Bicarbonate to Treat Severe Acidosis in the Critically Ill |
| NCT03317444 | PHASE3 | COMPLETED | Evaluation of TRC101 in Subjects With Metabolic Acidosis Associated With Chronic Kidney Disease |
| NCT03390842 | PHASE3 | COMPLETED | Long-term Safety Extension to Study TRCA-301 |
| NCT03710291 | PHASE3 | TERMINATED | Evaluation of Effect of TRC101 on Progression of Chronic Kidney Disease in Subjects With Metabolic Acidosis |
| NCT04727528 | PHASE3 | TERMINATED | Study of the Effect of SZC on Serum Potassium and Serum Bicarbonate in Patients With Hyperkalemia and Metabolic Acidosis Associated With Chronic Kidney Disease |
| NCT05697770 | PHASE3 | ACTIVE_NOT_RECRUITING | SODium BICarbonate for Metabolic Acidosis in the ICU |
| NCT06545565 | PHASE3 | RECRUITING | Prevention of Metabolic Acidosis in Preterm Neonates by Replacing Sodium Chloride With Sodium Acetate in Parenteral Nutrition |
| NCT07355062 | PHASE3 | RECRUITING | A Study to Evaluate the Efficacy and Safety of Veverimer for the Treatment of Metabolic Acidosis |
| NCT00960232 | PHASE3 | COMPLETED | Vitamin D, Blood Pressure, Lipids, Infection and Depression |
| NCT01012414 | PHASE3 | TERMINATED | Effect of Vitamin D Supplement on Inflammation Markers in High-Risk Cardiovascular Patients With Chronic Kidney Disease |
| NCT01315366 | PHASE3 | COMPLETED | Hypovitaminosis D : A Link Between Bone/Mineral and Fat/Fuel Metabolism |
| NCT01689779 | PHASE3 | COMPLETED | High Dose Preoperative Cholecalciferol Supplementation and Perioperative Vitamin D Status |
| NCT01896544 | PHASE3 | COMPLETED | Cholecalciferol Supplementation for Sepsis in the ICU |
| NCT02328404 | PHASE3 | COMPLETED | The Effect of Vitamin D Supplementation Among Overweight Jordanian Women With Polycystic Ovary Syndrome (PCOS) |
| NCT02434380 | PHASE3 | COMPLETED | Effect of Vitamin D Replacement on Maternal and Neonatal Outcomes |
| NCT03272126 | PHASE3 | COMPLETED | Importance of Dosing Regimen for the Effect of Vitamin D Supplementation |
| NCT05306704 | PHASE3 | COMPLETED | High-Dose Vitamin D3 Supplementation in the Treatment of Human Immune Deficiency Virus Patients Trial |
| NCT05425914 | PHASE3 | COMPLETED | Impact of Vitamin D3 Supplementation in Non-Sjogren Dry Eye Patients With Low Serum Vitamin D Level |
| NCT00913796 | PHASE2 | COMPLETED | Metabolic Acidosis in Renal Transplant Patients |
| NCT02303548 | PHASE2 | COMPLETED | Bicarbonate in Patients With Out-of-hospital Cardiac Arrest |
| NCT04984226 | PHASE2 | RECRUITING | Sodium Bicarbonate and Mitochondrial Energetics in Persons With CKD |
| NCT05147051 | PHASE2 | COMPLETED | Meglimine Sodium Succinate for Correction of Metabolic Acidosis in Critically Ill Patients |
| NCT00001151 | PHASE2 | TERMINATED | Studies With 1,25-Dihydroxycholecalciferol |
| NCT00992797 | PHASE2 | UNKNOWN | Diabetes Intervention Trial With Vitamin D in Subjects of Nordic and Sub-Indian Ethnicity |
| NCT01656070 | PHASE2 | COMPLETED | Vitamin D Supplementation in HIV-infected Youth |
| NCT02452762 | PHASE2 | COMPLETED | Rapid Normalization of Vitamin D in Critically Ill Children: A Phase II Dose Evaluation Randomized Controlled Trial |
| NCT01777178 | PHASE1 | COMPLETED | Comparison of Standard Versus Low Bicarbonate Hemodialysis |
| NCT01894594 | PHASE1 | TERMINATED | Efficacy, Safety Study and Benefit of Alkali Therapy in Sickle Cell Disease |
| NCT01452412 | PHASE2/PHASE3 | COMPLETED | Alkali Therapy in Chronic Kidney Disease |
| NCT06366230 | PHASE1/PHASE2 | RECRUITING | Adding Urea to the Final Dialysis Fluid |
Related Atlas pages
- Targeted by drugs: Acetazolamide, Brinzolamide, Chlorthalidone, Dichlorphenamide, Dorzolamide, Epinephrine, Ethoxzolamide, Histamine, Methazolamide, Methocarbamol, Sulpiride, Topiramate, Zonisamide
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): chromosome 8q21.11 deletion syndrome, metabolic acidosis, renal tubular acidosis, rickets