CADM2-AS1

Summary

CADM2-AS1 (CADM2 antisense RNA 1, HGNC:41248) is a long non-coding RNA gene on chromosome 3p12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41248
Approved symbol	CADM2-AS1
Name	CADM2 antisense RNA 1
Location	3p12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000239519
Ensembl biotype	lncRNA
Entrez	100874038
RNAcentral	URS0000298714 — lncRNA, 2656 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000476021

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000476021 — 2 exons

Exon	Start	End
ENSE00001811331	86027884	86028007
ENSE00001837899	85992183	85994714

Expression profiles

Bgee: expression breadth broad, 58 present calls, max score 81.80.

Top tissues by expression

168 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.80	silver quality
colonic epithelium	UBERON:0000397	65.84	silver quality
buccal mucosa cell	CL:0002336	61.98	silver quality
ventricular zone	UBERON:0003053	59.50	gold quality
cortical plate	UBERON:0005343	58.50	silver quality
ganglionic eminence	UBERON:0004023	58.07	silver quality
sural nerve	UBERON:0015488	55.93	silver quality
upper lobe of lung	UBERON:0008948	55.84	silver quality
lower lobe of lung	UBERON:0008949	55.66	silver quality
corpus callosum	UBERON:0002336	51.55	gold quality
medial globus pallidus	UBERON:0002477	50.18	gold quality
islet of Langerhans	UBERON:0000006	49.98	silver quality
monocyte	CL:0000576	49.27	silver quality
cerebellar cortex	UBERON:0002129	48.44	gold quality
prefrontal cortex	UBERON:0000451	48.39	gold quality
testis	UBERON:0000473	48.39	gold quality
cerebellar hemisphere	UBERON:0002245	48.23	gold quality
oviduct epithelium	UBERON:0004804	48.05	silver quality
globus pallidus	UBERON:0001875	47.94	gold quality
cerebellum	UBERON:0002037	47.62	silver quality
adrenal tissue	UBERON:0018303	47.49	gold quality
calcaneal tendon	UBERON:0003701	47.48	silver quality
muscle of leg	UBERON:0001383	46.42	silver quality
fallopian tube	UBERON:0003889	46.26	silver quality
stomach	UBERON:0000945	45.96	gold quality
right atrium auricular region	UBERON:0006631	45.77	silver quality
Brodmann (1909) area 9	UBERON:0013540	45.16	gold quality
gastrocnemius	UBERON:0001388	44.66	silver quality
primary visual cortex	UBERON:0002436	44.28	silver quality
right hemisphere of cerebellum	UBERON:0014890	43.96	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.