CALHM2-AS1

Summary

CALHM2-AS1 (CALHM2 antisense RNA 1, HGNC:58612) is a long non-coding RNA gene on chromosome 10q24.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58612
Approved symbol	CALHM2-AS1
Name	CALHM2 antisense RNA 1
Location	10q24.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000273485
Ensembl biotype	lncRNA
Entrez	142761578

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000608063

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000608063 — 1 exons

Exon	Start	End
ENSE00003703364	103450196	103450852

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 83.21.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.21	gold quality
granulocyte	CL:0000094	77.73	gold quality
colonic epithelium	UBERON:0000397	74.02	gold quality
stromal cell of endometrium	CL:0002255	72.64	gold quality
bone marrow cell	CL:0002092	70.90	silver quality
ganglionic eminence	UBERON:0004023	70.06	gold quality
endocervix	UBERON:0000458	69.28	gold quality
smooth muscle tissue	UBERON:0001135	68.94	gold quality
myometrium	UBERON:0001296	68.89	gold quality
lymph node	UBERON:0000029	68.78	gold quality
ventricular zone	UBERON:0003053	68.72	gold quality
uterine cervix	UBERON:0000002	68.23	gold quality
right ovary	UBERON:0002118	67.92	gold quality
blood	UBERON:0000178	67.41	gold quality
ovary	UBERON:0000992	67.23	gold quality
apex of heart	UBERON:0002098	67.11	gold quality
body of uterus	UBERON:0009853	66.95	gold quality
ectocervix	UBERON:0012249	66.80	gold quality
left ovary	UBERON:0002119	66.75	gold quality
gall bladder	UBERON:0002110	66.68	gold quality
leukocyte	CL:0000738	66.60	gold quality
descending thoracic aorta	UBERON:0002345	66.52	gold quality
bone marrow	UBERON:0002371	66.51	gold quality
left coronary artery	UBERON:0001626	66.12	gold quality
left uterine tube	UBERON:0001303	66.02	gold quality
monocyte	CL:0000576	65.53	gold quality
subcutaneous adipose tissue	UBERON:0002190	65.52	gold quality
muscle tissue	UBERON:0002385	65.48	gold quality
adipose tissue	UBERON:0001013	65.23	gold quality
placenta	UBERON:0001987	65.11	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.53

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.