CAMK1G
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Also known as VWS1CLICKIIIdJ272L16.1
Summary
CAMK1G (calcium/calmodulin dependent protein kinase IG, HGNC:14585) is a protein-coding gene on chromosome 1q32.2, encoding Calcium/calmodulin-dependent protein kinase type 1G (Q96NX5). Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade.
Predicted to enable calcium/calmodulin-dependent protein kinase activity and calmodulin binding activity. Predicted to be involved in signal transduction. Predicted to be located in Golgi membrane and plasma membrane. Predicted to be part of calcium- and calmodulin-dependent protein kinase complex. Predicted to be active in cytoplasm.
Source: NCBI Gene 57172 — RefSeq curated summary.
At a glance
- GWAS associations: 4
- Clinical variants (ClinVar): 87 total
- Druggable target: yes — 14 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_020439
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:14585 |
| Approved symbol | CAMK1G |
| Name | calcium/calmodulin dependent protein kinase IG |
| Location | 1q32.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | VWS1, CLICKIII, dJ272L16.1 |
| Ensembl gene | ENSG00000008118 |
| Ensembl biotype | protein_coding |
| OMIM | 614994 |
| Entrez | 57172 |
Gene structure
Transcript identifiers
Ensembl transcripts: 7 — 6 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000009105, ENST00000361322, ENST00000423146, ENST00000494990, ENST00000651530, ENST00000900039, ENST00000931514
RefSeq mRNA: 1 — MANE Select: NM_020439
NM_020439
CCDS: CCDS1486
Canonical transcript exons
ENST00000361322 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000476632 | 209594955 | 209595075 |
| ENSE00000792078 | 209599983 | 209600111 |
| ENSE00000792079 | 209603214 | 209603288 |
| ENSE00000792081 | 209606320 | 209606443 |
| ENSE00000792086 | 209611792 | 209612216 |
| ENSE00001164873 | 209605536 | 209605674 |
| ENSE00001167104 | 209612785 | 209612912 |
| ENSE00001777806 | 209607858 | 209607933 |
| ENSE00003511719 | 209609851 | 209609929 |
| ENSE00003528180 | 209611465 | 209611552 |
| ENSE00003675261 | 209608980 | 209609092 |
| ENSE00003842446 | 209613040 | 209613939 |
| ENSE00003845237 | 209583714 | 209583772 |
Expression profiles
Bgee: expression breadth ubiquitous, 175 present calls, max score 92.51.
FANTOM5 (CAGE): breadth broad, TPM avg 4.5227 / max 848.0818, expressed in 581 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 8313 | 4.0013 | 446 |
| 8314 | 0.2170 | 71 |
| 8317 | 0.1387 | 68 |
| 8316 | 0.0841 | 39 |
| 8315 | 0.0816 | 30 |
Top tissues by expression
284 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| frontal pole | UBERON:0002795 | 92.51 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 92.44 | gold quality |
| right frontal lobe | UBERON:0002810 | 91.90 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 91.01 | gold quality |
| prefrontal cortex | UBERON:0000451 | 90.96 | gold quality |
| cingulate cortex | UBERON:0003027 | 90.64 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 90.61 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 90.31 | gold quality |
| nucleus accumbens | UBERON:0001882 | 90.22 | gold quality |
| frontal cortex | UBERON:0001870 | 90.08 | gold quality |
| diaphragm | UBERON:0001103 | 89.22 | gold quality |
| neocortex | UBERON:0001950 | 89.13 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 87.54 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 87.29 | silver quality |
| superior frontal gyrus | UBERON:0002661 | 87.25 | gold quality |
| putamen | UBERON:0001874 | 87.22 | gold quality |
| cerebral cortex | UBERON:0000956 | 87.13 | gold quality |
| caudate nucleus | UBERON:0001873 | 87.01 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 86.82 | gold quality |
| telencephalon | UBERON:0001893 | 86.35 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 86.09 | gold quality |
| stromal cell of endometrium | CL:0002255 | 85.52 | gold quality |
| metanephros cortex | UBERON:0010533 | 84.71 | gold quality |
| type B pancreatic cell | CL:0000169 | 84.36 | gold quality |
| forebrain | UBERON:0001890 | 84.33 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 83.52 | gold quality |
| olfactory bulb | UBERON:0002264 | 83.40 | gold quality |
| left ovary | UBERON:0002119 | 83.33 | gold quality |
| postcentral gyrus | UBERON:0002581 | 83.20 | gold quality |
| parietal lobe | UBERON:0001872 | 82.81 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 3.90 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
61 targeting CAMK1G, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4455 | 100.00 | 65.48 | 1587 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-4725-3P | 99.96 | 69.53 | 2520 |
| HSA-MIR-6780B-5P | 99.96 | 69.60 | 2562 |
| HSA-MIR-3912-5P | 99.95 | 66.11 | 925 |
| HSA-MIR-6721-5P | 99.93 | 68.92 | 2981 |
| HSA-MIR-3119 | 99.92 | 71.34 | 2390 |
| HSA-MIR-4271 | 99.88 | 68.32 | 2244 |
| HSA-MIR-3151-5P | 99.86 | 63.83 | 1069 |
| HSA-MIR-4447 | 99.85 | 67.81 | 2900 |
| HSA-MIR-1976 | 99.74 | 65.48 | 1127 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-1251-3P | 99.64 | 67.21 | 1408 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-5003-5P | 99.61 | 69.13 | 1624 |
| HSA-MIR-4516 | 99.61 | 67.78 | 3390 |
| HSA-MIR-4441 | 99.49 | 66.56 | 3216 |
| HSA-MIR-208A-5P | 99.42 | 70.83 | 1913 |
| HSA-MIR-208B-5P | 99.42 | 70.83 | 1952 |
| HSA-MIR-3140-5P | 99.39 | 69.04 | 1136 |
| HSA-MIR-940 | 99.37 | 66.14 | 2064 |
| HSA-MIR-135A-5P | 99.36 | 71.85 | 1601 |
| HSA-MIR-135B-5P | 99.36 | 71.63 | 1613 |
| HSA-MIR-185-5P | 99.35 | 68.60 | 2497 |
| HSA-MIR-4644 | 99.35 | 69.12 | 2514 |
| HSA-MIR-6808-5P | 99.31 | 66.23 | 2150 |
| HSA-MIR-6893-5P | 99.31 | 66.25 | 2119 |
| HSA-MIR-3922-3P | 99.25 | 64.96 | 1136 |
Literature-anchored findings (GeneRIF, showing 4)
- CLICK-III/CaMKIgamma is a novel membrane-anchored neuronal Ca2+/calmodulin-dependent protein kinase (CaMK). (PMID:12637513)
- Calmodulin suppresses synaptotagmin-2 transcription in cortical neurons (PMID:20729199)
- Two new susceptibility loci for amyotrophic lateral sclerosis in the Han Chinese population in chromosome 1, CAMK1G and chromosome 22, SUSD2 and CABIN1. (PMID:23624525)
- No evidence of association between polymorphisms in CAMK1G and sporadic amyotrophic lateral sclerosis in Han Chinese (PMID:25677198)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | camk1gb | ENSDARG00000008788 |
| danio_rerio | camk1ga | ENSDARG00000044526 |
| mus_musculus | Camk1g | ENSMUSG00000016179 |
| rattus_norvegicus | Camk1g | ENSRNOG00000006470 |
Paralogs (22): CAMKK1 (ENSG00000004660), CAMK2B (ENSG00000058404), CAMK2A (ENSG00000070808), MYLK2 (ENSG00000101306), CAMKK2 (ENSG00000110931), STK11 (ENSG00000118046), STK33 (ENSG00000130413), PNCK (ENSG00000130822), DCLK1 (ENSG00000133083), CAMK1 (ENSG00000134072), MYLK3 (ENSG00000140795), CAMK2D (ENSG00000145349), MYLK4 (ENSG00000145949), PSKH2 (ENSG00000147613), CAMK2G (ENSG00000148660), PHKG2 (ENSG00000156873), PSKH1 (ENSG00000159792), DCLK3 (ENSG00000163673), CAMKV (ENSG00000164076), PHKG1 (ENSG00000164776), DCLK2 (ENSG00000170390), CAMK1D (ENSG00000183049)
Protein
Protein identifiers
Calcium/calmodulin-dependent protein kinase type 1G — Q96NX5 (reviewed: Q96NX5)
Alternative names: CaM kinase I gamma, CaMK-like CREB kinase III
All UniProt accessions (3): Q96NX5, A0A494C109, C9IYV2
UniProt curated annotations — full annotation on UniProt →
Function. Calcium/calmodulin-dependent protein kinase belonging to a proposed calcium-triggered signaling cascade. In vitro phosphorylates transcription factor CREB1.
Subcellular location. Cytoplasm. Golgi apparatus membrane. Cell membrane.
Tissue specificity. Mainly expressed in brain with small amounts in skeletal muscles, kidney, spleen and liver. Strongly expressed in forebrain neocortex, striatum and limbic system.
Post-translational modifications. May be prenylated on Cys-473.
Activity regulation. Activated by Ca(2+)/calmodulin. Binding of calmodulin is thought to result in a conformational change and leads to activation through phosphorylation by CAMKK1.
Domain organisation. The autoinhibitory domain overlaps with the calmodulin binding region and interacts in the inactive folded state with the catalytic domain as a pseudosubstrate.
Similarity. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q96NX5-1 | 1 | yes |
| Q96NX5-2 | 2 |
RefSeq proteins (1): NP_065172* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
Pfam: PF00069
Enzyme classification (BRENDA):
- EC 2.7.11.17 — Ca2+/calmodulin-dependent protein kinase (BRENDA: 38 organisms, 300 substrates, 137 inhibitors, 35 Km, 17 kcat entries)
Substrate kinetics (BRENDA)
12 substrates with measured Km, best-characterized 12. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0071–178.29 | 13 |
| BIOTINYLATED THR-ARG-SER-ALA-ILE-ARG-ARG-ALA-SER | 0.0064–0.0158 | 4 |
| GST-TAGGED GLUN2A | 6.05–11.75 | 2 |
| GST-TAGGED GLUN2B | 0.35–5.93 | 2 |
| MAP2 | 0.0007–0.0008 | 2 |
| CALDESMON | 0.0049 | 1 |
| HISTONE IIIS | 0.0445 | 1 |
| LYS-LYS-ALA-LEU-ARG-ARG-GLN-GLU-ALA-VAL-ASP-ALA- | 0.063 | 1 |
| MICROTUBULE ASSOCIATED PROTEIN 2 | 0.0016 | 1 |
| SYNTIDE-2 | 0.02 | 1 |
| SYNTIDE-2 PEPTIDE | 0.0221 | 1 |
| MYELIN BASIC PROTEIN | — | 0 |
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (39 total): helix 12, strand 8, turn 5, sequence variant 3, region of interest 3, binding site 2, chain 1, domain 1, sequence conflict 1, compositionally biased region 1, active site 1, splice variant 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2JAM | X-RAY DIFFRACTION | 1.7 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96NX5-F1 | 67.61 | 0.40 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 143 (proton acceptor)
Ligand- & substrate-binding residues (2): 29–37; 52
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 105 (showing top):
SHEPARD_BMYB_MORPHOLINO_UP, BIOCARTA_FMLP_PATHWAY, MODULE_99, BIOCARTA_PGC1A_PATHWAY, BIOCARTA_HDAC_PATHWAY, SOX5_01, BLALOCK_ALZHEIMERS_DISEASE_DN, GOMF_PROTEIN_KINASE_ACTIVITY, GOMF_KINASE_ACTIVITY, GOMF_CALCIUM_CALMODULIN_DEPENDENT_PROTEIN_KINASE_ACTIVITY, GOMF_PROTEIN_SERINE_THREONINE_KINASE_ACTIVITY, MOREAUX_MULTIPLE_MYELOMA_BY_TACI_UP, GOMF_ADENYL_NUCLEOTIDE_BINDING, BROWNE_HCMV_INFECTION_16HR_DN, GOMF_TRANSFERASE_ACTIVITY_TRANSFERRING_PHOSPHORUS_CONTAINING_GROUPS
GO Biological Process (2): signal transduction (GO:0007165), protein phosphorylation (GO:0006468)
GO Molecular Function (11): calcium/calmodulin-dependent protein kinase activity (GO:0004683), calmodulin binding (GO:0005516), ATP binding (GO:0005524), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), catalytic activity (GO:0003824), protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (7): Golgi membrane (GO:0000139), cytoplasm (GO:0005737), plasma membrane (GO:0005886), calcium- and calmodulin-dependent protein kinase complex (GO:0005954), Golgi apparatus (GO:0005794), endomembrane system (GO:0012505), membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| protein kinase activity | 2 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| protein serine/threonine kinase activity | 1 |
| protein binding | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| molecular_function | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| binding | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| catalytic activity | 1 |
| Golgi apparatus | 1 |
| bounding membrane of organelle | 1 |
| intracellular anatomical structure | 1 |
| membrane | 1 |
| cell periphery | 1 |
| intracellular protein-containing complex | 1 |
| catalytic complex | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
| vacuole | 1 |
| plasma membrane | 1 |
Protein interactions and networks
STRING
2072 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CAMK1G | CALM1 | P02593 | 791 |
| CAMK1G | KCNN2 | Q9H2S1 | 767 |
| CAMK1G | MAP6D1 | Q9H9H5 | 449 |
| CAMK1G | CYP11B2 | P19099 | 441 |
| CAMK1G | PAXBP1 | Q9Y5B6 | 440 |
| CAMK1G | COMTD1 | Q86VU5 | 438 |
| CAMK1G | CACNA1F | O60840 | 437 |
| CAMK1G | DUS2 | Q9NX74 | 429 |
| CAMK1G | TMC4 | Q7Z404 | 421 |
| CAMK1G | CALML3 | P27482 | 419 |
| CAMK1G | CALML5 | Q9NZT1 | 419 |
| CAMK1G | COPRS | Q9NQ92 | 418 |
| CAMK1G | RIMBP2 | O15034 | 416 |
| CAMK1G | SYN2 | Q92777 | 415 |
| CAMK1G | AP3B2 | Q13367 | 412 |
IntAct
31 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| KRTAP10-8 | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.560 |
| CAMK1G | psi-mi:“MI:0915”(physical association) | 0.560 | |
| FLNA | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.560 |
| GRN | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.560 |
| MAT2A | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.560 |
| CAMK1G | WFS1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KIF1B | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.560 |
| CAMK1G | RFWD3 | psi-mi:“MI:0914”(association) | 0.530 |
| HSP90AB1 | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.400 |
| CDC45 | CAMK1G | psi-mi:“MI:0915”(physical association) | 0.370 |
| CAMK1D | psi-mi:“MI:0914”(association) | 0.350 | |
| CAMK1 | PSMD12 | psi-mi:“MI:0914”(association) | 0.350 |
| CAMK1D | CALM1 | psi-mi:“MI:0914”(association) | 0.350 |
| CAMK1G | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (21): CAMK1G (Affinity Capture-MS), ZBTB44 (Affinity Capture-MS), CAMK1G (Affinity Capture-MS), RFWD3 (Affinity Capture-MS), CAMK1G (Biochemical Activity), PIK3CA (Negative Genetic), CD22 (Positive Genetic), EPHA2 (Positive Genetic), MAP2K5 (Positive Genetic), KSR1 (Positive Genetic), KRTAP10-8 (Two-hybrid), KRTAP10-1 (Two-hybrid), CAMK1G (Affinity Capture-MS), ZBTB44 (Affinity Capture-MS), RFWD3 (Affinity Capture-MS)
ESM2 similar proteins: A0AUV4, A1A5Q6, A1A5R7, A2KF29, B1WAS2, C0HKC8, C0HKC9, D3ZML2, O60285, O74536, O88831, O88866, P41279, P51956, P57058, P97756, Q20443, Q2T9U5, Q5R7G9, Q5XHI9, Q60670, Q63562, Q641K5, Q66HE5, Q68UT7, Q6P431, Q6VZ17, Q7T0B0, Q7T0B1, Q7TNJ7, Q7TNL4, Q8BHI9, Q8BZN4, Q8C078, Q8C0N0, Q8C0V7, Q8C0X8, Q8CIP4, Q8IY84, Q8K4K4
Diamond homologs: A0A2I0BVG8, A0A509AFG4, A0A509AHB6, A0A509ALV6, A0A509AQE6, A0A5K1K8H0, A0AAR7, A5A7I7, A5A7I8, A8WXF6, O15865, O49717, O70150, P25323, P28582, P28583, P34101, P49101, P53681, P53682, P53683, P53684, P62343, P62344, P62345, P93759, Q06850, Q0D715, Q0DYK7, Q10KY3, Q1PE17, Q1PFH8, Q2QQR2, Q2QVG8, Q2QX45, Q38868, Q38869, Q38870, Q38871, Q38872
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| CAMK1G | up-regulates | EIF4G3 | phosphorylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
87 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 67 |
| Likely benign | 3 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1778 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:209594939:A:AG | acceptor_gain | 1.0000 |
| 1:209594940:C:G | acceptor_gain | 1.0000 |
| 1:209594945:T:A | acceptor_gain | 1.0000 |
| 1:209594948:A:AG | acceptor_gain | 1.0000 |
| 1:209594949:A:G | acceptor_gain | 1.0000 |
| 1:209594951:A:AG | acceptor_gain | 1.0000 |
| 1:209594952:A:G | acceptor_gain | 1.0000 |
| 1:209594953:A:AG | acceptor_gain | 1.0000 |
| 1:209594954:G:GG | acceptor_gain | 1.0000 |
| 1:209595062:G:GT | donor_gain | 1.0000 |
| 1:209595062:G:T | donor_gain | 1.0000 |
| 1:209595071:GGATC:G | donor_gain | 1.0000 |
| 1:209595072:GATC:G | donor_gain | 1.0000 |
| 1:209595072:GATCG:G | donor_gain | 1.0000 |
| 1:209595073:ATC:A | donor_gain | 1.0000 |
| 1:209595074:TC:T | donor_gain | 1.0000 |
| 1:209595076:G:GG | donor_gain | 1.0000 |
| 1:209599981:A:AG | acceptor_gain | 1.0000 |
| 1:209599981:AGAG:A | acceptor_gain | 1.0000 |
| 1:209599982:G:GG | acceptor_gain | 1.0000 |
| 1:209599982:GA:G | acceptor_gain | 1.0000 |
| 1:209599982:GAGG:G | acceptor_gain | 1.0000 |
| 1:209599982:GAGGA:G | acceptor_gain | 1.0000 |
| 1:209600109:AAA:A | donor_gain | 1.0000 |
| 1:209600110:AA:A | donor_gain | 1.0000 |
| 1:209600111:AG:A | donor_loss | 1.0000 |
| 1:209600112:G:GG | donor_gain | 1.0000 |
| 1:209600113:T:G | donor_loss | 1.0000 |
| 1:209600114:G:GT | donor_loss | 1.0000 |
| 1:209603209:CCCA:C | acceptor_loss | 1.0000 |
AlphaMissense
3139 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:209595071:G:A | G30R | 1.000 |
| 1:209595071:G:C | G30R | 1.000 |
| 1:209595072:G:A | G30E | 1.000 |
| 1:209599984:G:A | G32R | 1.000 |
| 1:209599984:G:C | G32R | 1.000 |
| 1:209599985:G:A | G32E | 1.000 |
| 1:209599990:T:C | F34L | 1.000 |
| 1:209599992:C:A | F34L | 1.000 |
| 1:209599992:C:G | F34L | 1.000 |
| 1:209599993:T:C | S35P | 1.000 |
| 1:209600039:C:A | A50D | 1.000 |
| 1:209600042:T:C | L51P | 1.000 |
| 1:209600044:A:C | K52Q | 1.000 |
| 1:209600044:A:G | K52E | 1.000 |
| 1:209600045:A:T | K52M | 1.000 |
| 1:209600046:G:C | K52N | 1.000 |
| 1:209600046:G:T | K52N | 1.000 |
| 1:209600093:A:G | E68G | 1.000 |
| 1:209600093:A:T | E68V | 1.000 |
| 1:209603276:T:C | L95P | 1.000 |
| 1:209605553:T:C | L105P | 1.000 |
| 1:209605562:G:C | R108P | 1.000 |
| 1:209605597:G:C | A120P | 1.000 |
| 1:209605598:C:A | A120D | 1.000 |
| 1:209605640:T:C | L134P | 1.000 |
| 1:209605658:T:A | V140D | 1.000 |
| 1:209605660:C:G | H141D | 1.000 |
| 1:209605661:A:G | H141R | 1.000 |
| 1:209605664:G:C | R142T | 1.000 |
| 1:209605664:G:T | R142I | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000052757 (1:209593657 G>A,T), RS1000095736 (1:209593278 C>A,G), RS1000261132 (1:209588250 A>G), RS1000345097 (1:209598953 C>T), RS1000417898 (1:209582577 G>A,T), RS1000513774 (1:209609644 G>A), RS1000549546 (1:209593029 A>C,G,T), RS1000634507 (1:209588493 C>T), RS1000968788 (1:209604367 G>T), RS1001071172 (1:209609491 A>G), RS1001073247 (1:209582860 C>G), RS1001297106 (1:209600268 T>G), RS1001344946 (1:209588789 T>A,C), RS1001385707 (1:209588570 G>C), RS1001395190 (1:209610445 T>C)
Disease associations
OMIM: gene MIM:614994 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001240_1 | Obesity (extreme) | 2.000000e-06 |
| GCST001981_1 | Amyotrophic lateral sclerosis | 3.000000e-08 |
| GCST009443_1 | Age-related cognitive decline (visuospatial skill) (slope of z-scores) | 6.000000e-06 |
| GCST010988_268 | Adult body size | 5.000000e-08 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007710 | cognitive decline measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5258 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
14 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 142,468 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1287853 | FEDRATINIB | 4 | 3,554 |
| CHEMBL1789941 | RUXOLITINIB | 4 | 11,547 |
| CHEMBL477772 | PAZOPANIB | 4 | 15,540 |
| CHEMBL502835 | NINTEDANIB | 4 | 8,545 |
| CHEMBL535 | SUNITINIB | 4 | 79,020 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL522892 | DOVITINIB | 3 | 4,944 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL1721885 | SU-014813 | 2 | 363 |
| CHEMBL3544964 | RAVOXERTINIB | 2 | 1,243 |
| CHEMBL475251 | R-406 | 2 | 762 |
| CHEMBL521851 | PICTILISIB | 2 | 6,071 |
| CHEMBL572878 | TOZASERTIB | 2 | 2,998 |
| CHEMBL1908397 | KW-2449 | 1 | 622 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — CAMK1 family
Binding affinities (BindingDB)
5 measured of 5 human assays (5 total across all organisms); most potent 5 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| Staurosporine | KD | 1.7 nM |
| PKC-412 | KD | 190 nM |
| 5-[(Z)-(5-fluoranyl-2-oxidanylidene-1H-indol-3-ylidene)methyl]-2,4-dimethyl-N-[(2S)-3-morpholin-4-yl-2-oxidanyl-propyl]-1H-pyrrole-3-carboxamide | KD | 2600 nM |
| 5-({4-[(2,3-dimethyl-2H-indazol-6-yl)(methyl)amino]pyrimidin-2-yl}amino)-2-methylbenzene-1-sulfonamide | KD | 2900 nM |
| N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | KD | 3500 nM |
ChEMBL bioactivities
40 potent at pChembl≥5 of 40 total, top 34 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 9.00 | Kd | 1 | nM | DOVITINIB |
| 9.00 | IC50 | 1 | nM | CHEMBL4635883 |
| 8.40 | IC50 | 3.96 | nM | STAUROSPORINE |
| 8.27 | IC50 | 5.34 | nM | STAUROSPORINE |
| 8.13 | IC50 | 7.41 | nM | STAUROSPORINE |
| 7.96 | IC50 | 11 | nM | CHEMBL4635883 |
| 7.64 | Kd | 23 | nM | STAUROSPORINE |
| 7.28 | Kd | 53 | nM | STAUROSPORINE |
| 7.26 | IC50 | 55 | nM | CHEMBL4635883 |
| 6.93 | Kd | 117 | nM | RAVOXERTINIB |
| 6.58 | Kd | 260 | nM | NINTEDANIB |
| 6.52 | Kd | 302 | nM | CHEMBL4576489 |
| 6.49 | Kd | 326 | nM | CHEMBL4465866 |
| 6.36 | Kd | 440 | nM | SUNITINIB |
| 6.34 | Kd | 460 | nM | R-406 |
| 6.33 | Kd | 470 | nM | LESTAURTINIB |
| 6.03 | Kd | 940 | nM | SU-014813 |
| 6.00 | Kd | 990 | nM | SUNITINIB |
| 6.00 | IC50 | 1000 | nM | TP-030-1 |
| 6.00 | IC50 | 1000 | nM | TP-030-2 |
| 6.00 | IC50 | 1000 | nM | TP-030n |
| 5.75 | Kd | 1800 | nM | MIDOSTAURIN |
| 5.68 | Kd | 2100 | nM | KW-2449 |
| 5.66 | Kd | 2200 | nM | RUXOLITINIB |
| 5.52 | IC50 | 3000 | nM | CHEMBL4795714 |
| 5.52 | Kd | 3000 | nM | TAE-684 |
| 5.50 | Kd | 3200 | nM | FEDRATINIB |
| 5.43 | Kd | 3700 | nM | PAZOPANIB |
| 5.38 | Kd | 4200 | nM | CHEMBL2425628 |
| 5.38 | Kd | 4200 | nM | SP-600125 |
| 5.32 | IC50 | 4810 | nM | CHEMBL579353 |
| 5.21 | Kd | 6200 | nM | CHEMBL1908395 |
| 5.19 | Kd | 6500 | nM | TOZASERTIB |
| 5.17 | Kd | 6800 | nM | PICTILISIB |
PubChem BioAssay actives
34 with measured affinity, of 439 total; 24 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-amino-5-fluoro-3-[6-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-quinolin-2-one | 1424927: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.0010 | uM |
| 2-[(3S)-3-aminopiperidin-1-yl]-4-[[2,6-di(propan-2-yl)-4-pyridinyl]amino]pyrimidine-5-carboxamide | 1668918: Inhibition of human CAMK1G using KKALRRQETVDAL as substrate in presence of [gamma-33P]-ATP by hotspot assay | ic50 | 0.0010 | uM |
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 1715429: Inhibition of human CAMK1G using KKALRRQETVDAL as substrate by [gamma-33P]-ATP assay | ic50 | 0.0040 | uM |
| 1-[(1S)-1-(4-chloro-3-fluorophenyl)-2-hydroxyethyl]-4-[2-[(2-methylpyrazol-3-yl)amino]pyrimidin-4-yl]pyridin-2-one | 1424927: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.1170 | uM |
| methyl 2-hydroxy-3-[N-[4-[methyl-[2-(4-methylpiperazin-1-yl)acetyl]amino]phenyl]-C-phenylcarbonimidoyl]-1H-indole-6-carboxylate | 625119: Binding constant for CAMK1G kinase domain | kd | 0.2600 | uM |
| 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]-methylamino]ethoxy]ethoxy]ethoxy]ethyl]propanamide | 1526248: Binding affinity to recombinant full-length N-terminal His-FLAG-GST-tagged CAMK1G (unknown origin) expressed in baculovirus infected Sf9 insect cells incubated for 1 hr in presence of calmodulin by TR-FRET assay | kd | 0.3020 | uM |
| 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]amino]ethoxy]ethoxy]ethoxy]ethyl]propanamide | 1526248: Binding affinity to recombinant full-length N-terminal His-FLAG-GST-tagged CAMK1G (unknown origin) expressed in baculovirus infected Sf9 insect cells incubated for 1 hr in presence of calmodulin by TR-FRET assay | kd | 0.3260 | uM |
| Sunitinib | 435151: Binding constant for CAMK1G kinase domain | kd | 0.4400 | uM |
| 6-[[5-fluoro-2-(3,4,5-trimethoxyanilino)pyrimidin-4-yl]amino]-2,2-dimethyl-4H-pyrido[3,2-b][1,4]oxazin-3-one | 625119: Binding constant for CAMK1G kinase domain | kd | 0.4600 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 625119: Binding constant for CAMK1G kinase domain | kd | 0.4700 | uM |
| 5-[(Z)-(5-fluoro-2-oxo-1H-indol-3-ylidene)methyl]-N-[(2S)-2-hydroxy-3-morpholin-4-ylpropyl]-2,4-dimethyl-1H-pyrrole-3-carboxamide | 435151: Binding constant for CAMK1G kinase domain | kd | 0.9400 | uM |
| Midostaurin | 435151: Binding constant for CAMK1G kinase domain | kd | 1.8000 | uM |
| [4-[(E)-2-(1H-indazol-3-yl)ethenyl]phenyl]-piperazin-1-ylmethanone | 625119: Binding constant for CAMK1G kinase domain | kd | 2.1000 | uM |
| Ruxolitinib | 625119: Binding constant for CAMK1G kinase domain | kd | 2.2000 | uM |
| 5-chloro-2-N-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-4-N-(2-propan-2-ylsulfonylphenyl)pyrimidine-2,4-diamine | 625119: Binding constant for CAMK1G kinase domain | kd | 3.0000 | uM |
| 1-pentyl-4-(2-phenylmethoxyphenyl)imidazol-2-amine;hydrochloride | 1734147: Inhibition of wild-type human CAMK1gamma using KKALRRQETVDAL peptide as substrate in presence of Ca2+ calmodulin and [gamma-33P]-ATP by radiometric hotspot kinase assay | ic50 | 3.0000 | uM |
| Fedratinib | 625119: Binding constant for CAMK1G kinase domain | kd | 3.2000 | uM |
| Pazopanib | 435151: Binding constant for CAMK1G kinase domain | kd | 3.7000 | uM |
| (4-hydroxypiperidin-1-yl)-[4-[[4-[4-(3-methylsulfonylpropoxy)indol-1-yl]pyrimidin-2-yl]amino]cyclohexyl]methanone | 769533: Binding affinity to CAMK1G (unknown origin) | kd | 4.2000 | uM |
| 14,15-diazatetracyclo[7.6.1.02,7.013,16]hexadeca-1(15),2,4,6,9(16),10,12-heptaen-8-one | 256581: Average Binding Constant for CAMK1G; NA=Not Active at 10 uM | kd | 4.2000 | uM |
| 4-N-[7-chloro-2-[(E)-2-(2-chloro-4,5-dimethoxyphenyl)ethenyl]quinazolin-4-yl]-1-N,1-N-diethylpentane-1,4-diamine | 1612802: Inhibition of human CAMK1G using KKALRRQETVDAL as substrate by [gamma-33P]-ATP assay | ic50 | 4.8100 | uM |
| 5-cyano-N-[2-(cyclohexen-1-yl)-4-[1-[2-(dimethylamino)acetyl]piperidin-4-yl]phenyl]-1H-imidazole-2-carboxamide;hydrochloride | 625119: Binding constant for CAMK1G kinase domain | kd | 6.2000 | uM |
| N-[4-[4-(4-methylpiperazin-1-yl)-6-[(5-methyl-1H-pyrazol-3-yl)amino]pyrimidin-2-yl]sulfanylphenyl]cyclopropanecarboxamide | 625119: Binding constant for CAMK1G kinase domain | kd | 6.5000 | uM |
| 4-[2-(1H-indazol-4-yl)-6-[(4-methylsulfonylpiperazin-1-yl)methyl]thieno[3,2-d]pyrimidin-4-yl]morpholine | 625119: Binding constant for CAMK1G kinase domain | kd | 6.8000 | uM |
CTD chemical–gene interactions
14 total (human), top 14 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, increases expression, increases methylation | 2 |
| cobaltous chloride | decreases expression | 1 |
| zinc chromate | increases abundance, increases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression | 1 |
| chromium hexavalent ion | increases abundance, increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| abrine | increases expression | 1 |
| Atrazine | increases expression | 1 |
| Lipopolysaccharides | increases expression, affects response to substance | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Valproic Acid | decreases methylation | 1 |
| Vanadates | increases expression | 1 |
| Zinc | increases expression | 1 |
| Aflatoxin B1 | increases expression | 1 |
ChEMBL screening assays
137 unique, capped per target: 136 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1034109 | Binding | Inhibition of CAMK1G at 3 uM | Discovery of substituted 4-(pyrazol-4-yl)-phenylbenzodioxane-2-carboxamides as potent and highly selective Rho kinase (ROCK-II) inhibitors. — J Med Chem |
| CHEMBL5444395 | Functional | Affinity Phenotypic Cellular interaction: (Western Blot assay (autophophorylation of CAMK1D in MDA-MB-231 cells) ) EUB0000878a CAMK1G | Affinity Phenotypic Cellular Literature for EUbOPEN Chemogenomic Library |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): amyotrophic lateral sclerosis, obesity disorder