CAMK2D

gene
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Summary

CAMK2D (calcium/calmodulin dependent protein kinase II delta, HGNC:1462) is a protein-coding gene on chromosome 4q26, encoding Calcium/calmodulin-dependent protein kinase type II subunit delta (Q13557). Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarc….

The product of this gene belongs to the serine/threonine protein kinase family and to the Ca(2+)/calmodulin-dependent protein kinase subfamily. Calcium signaling is crucial for several aspects of plasticity at glutamatergic synapses. In mammalian cells, the enzyme is composed of four different chains: alpha, beta, gamma, and delta. The product of this gene is a delta chain. Alternative splicing results in multiple transcript variants encoding distinct isoforms. Distinct isoforms of this chain have different expression patterns.

Source: NCBI Gene 817 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy (Strong, ClinGen) — +1 more curated relationship
  • GWAS associations: 27
  • Clinical variants (ClinVar): 86 total — 7 pathogenic, 2 likely-pathogenic
  • Druggable target: yes — 40 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_001321571

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:1462
Approved symbolCAMK2D
Namecalcium/calmodulin dependent protein kinase II delta
Location4q26
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000145349
Ensembl biotypeprotein_coding
OMIM607708
Entrez817

Gene structure

Transcript identifiers

Ensembl transcripts: 63 — 53 protein_coding, 6 nonsense_mediated_decay, 2 retained_intron, 2 protein_coding_CDS_not_defined

ENST00000296402, ENST00000342666, ENST00000379773, ENST00000394522, ENST00000394524, ENST00000505132, ENST00000505990, ENST00000508738, ENST00000509594, ENST00000509907, ENST00000511664, ENST00000513132, ENST00000514328, ENST00000515496, ENST00000683023, ENST00000699047, ENST00000699048, ENST00000699372, ENST00000699373, ENST00000699374, ENST00000699375, ENST00000699376, ENST00000699377, ENST00000699378, ENST00000699379, ENST00000699380, ENST00000699381, ENST00000699382, ENST00000699415, ENST00000699416, ENST00000699417, ENST00000699418, ENST00000699419, ENST00000699420, ENST00000699421, ENST00000706055, ENST00000706056, ENST00000706057, ENST00000867798, ENST00000867799, ENST00000867800, ENST00000867801, ENST00000867802, ENST00000867803, ENST00000947047, ENST00000947048, ENST00000947049, ENST00000947050, ENST00000947051, ENST00000947052, ENST00000947053, ENST00000947054, ENST00000947055, ENST00000947056, ENST00000947057, ENST00000947058, ENST00000947059, ENST00000947060, ENST00000947061, ENST00000947062, ENST00000947063, ENST00000947064, ENST00000947065

RefSeq mRNA: 48 — MANE Select: NM_001321571 NM_001221, NM_001321566, NM_001321567, NM_001321568, NM_001321569, NM_001321570, NM_001321571, NM_001321572, NM_001321573, NM_001321574, NM_001321575, NM_001321576, NM_001321577, NM_001321578, NM_001321579, NM_001321580, NM_001321581, NM_001321582, NM_001321583, NM_001321584, NM_001321585, NM_001321586, NM_001321587, NM_001321588, NM_001321589, NM_001321590, NM_001321591, NM_001321592, NM_001396964, NM_001396965, NM_001396966, NM_001396967, NM_001399855, NM_001399856, NM_001399857, NM_001399858, NM_001399859, NM_001399860, NM_001399861, NM_001399862, NM_001399863, NM_001399864, NM_001399865, NM_172114, NM_172115, NM_172127, NM_172128, NM_172129

CCDS: CCDS3703, CCDS3704, CCDS43263, CCDS47127, CCDS54797, CCDS82948, CCDS82949, CCDS82950, CCDS93601, CCDS93602, CCDS93603, CCDS93604, CCDS93605, CCDS93606, CCDS93607, CCDS93608, CCDS93609, CCDS93610, CCDS93611, CCDS93612

Canonical transcript exons

ENST00000511664 — 21 exons

ExonStartEnd
ENSE00001003903113500463113500511
ENSE00001003911113515069113515191
ENSE00001003913113552031113552096
ENSE00001121155113465529113465604
ENSE00001121166113509638113509675
ENSE00001276264113457335113457563
ENSE00001276352113609152113609206
ENSE00001276388113455726113455821
ENSE00001617342113537341113537443
ENSE00001625946113502936113502977
ENSE00001716426113504976113505035
ENSE00001752494113513328113513370
ENSE00001791998113513830113513913
ENSE00002062068113761004113761738
ENSE00002459857113517563113517657
ENSE00002483543113531216113531299
ENSE00002496111113661713113661772
ENSE00002527351113547644113547716
ENSE00003519737113759320113759414
ENSE00003786791113460147113460241
ENSE00003994638113451032113454515

Expression profiles

Bgee: expression breadth ubiquitous, 260 present calls, max score 99.65.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 51.9422 / max 470.7728, expressed in 1753 samples.

FANTOM5 promoters (14 alternative TSS)

Promoter IDTPM avgSamples expressed
5368435.00081733
536784.64751313
536793.64811263
536852.77671161
536762.0617950
536770.8428522
536810.8268510
536820.5994351
536860.3976144
2033170.3787169

Top tissues by expression

262 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
left ventricle myocardiumUBERON:000656699.65gold quality
lateral nuclear group of thalamusUBERON:000273699.59gold quality
cardiac muscle of right atriumUBERON:000337999.58gold quality
myocardiumUBERON:000234999.37gold quality
middle temporal gyrusUBERON:000277199.31gold quality
Brodmann (1909) area 23UBERON:001355499.29gold quality
heart right ventricleUBERON:000208099.07gold quality
entorhinal cortexUBERON:000272898.99gold quality
tibialis anteriorUBERON:000138598.96gold quality
deltoidUBERON:000147698.80gold quality
endothelial cellCL:000011598.79gold quality
pancreatic ductal cellCL:000207998.65gold quality
epithelial cell of pancreasCL:000008398.56gold quality
vastus lateralisUBERON:000137998.21gold quality
quadriceps femorisUBERON:000137798.09gold quality
biceps brachiiUBERON:000150797.95gold quality
substantia nigra pars reticulataUBERON:000196697.66gold quality
seminal vesicleUBERON:000099897.63gold quality
substantia nigra pars compactaUBERON:000196597.63gold quality
skeletal muscle tissueUBERON:000113497.60gold quality
skeletal muscle tissue of biceps brachiiUBERON:000450297.55gold quality
Brodmann (1909) area 46UBERON:000648397.48gold quality
skeletal muscle tissue of rectus abdominisUBERON:000451197.46gold quality
ileal mucosaUBERON:000033197.42gold quality
cartilage tissueUBERON:000241897.38gold quality
superior frontal gyrusUBERON:000266197.31gold quality
muscle tissueUBERON:000238596.98gold quality
postcentral gyrusUBERON:000258196.83gold quality
cerebellar vermisUBERON:000472096.80gold quality
cardiac ventricleUBERON:000208296.66gold quality

Single-cell (SCXA)

Detected in 7 experiment(s), a significant marker in 5.

ExperimentMarker?Max mean expression
E-MTAB-9388yes11.19
E-MTAB-9801yes8.49
E-MTAB-6678yes8.04
E-MTAB-10042yes7.89
E-HCAD-30no564.15
E-CURD-112no2.80
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): NFKB

miRNA regulators (miRDB)

153 targeting CAMK2D, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-1277-5P100.0073.955056
HSA-MIR-30A-5P100.0076.313233
HSA-MIR-30B-5P100.0076.293248
HSA-MIR-30C-5P100.0076.293248
HSA-MIR-30D-5P100.0076.323233
HSA-MIR-30E-5P100.0076.323242
HSA-MIR-4476100.0068.182030
HSA-MIR-6876-5P100.0067.682126
HSA-MIR-4262100.0073.263931
HSA-MIR-4533100.0069.482758
HSA-MIR-5011-5P100.0083.465820
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-181A-5P99.9972.962995
HSA-MIR-181B-5P99.9972.972996
HSA-MIR-181C-5P99.9972.952996
HSA-MIR-181D-5P99.9973.042997
HSA-MIR-453499.9966.581907
HSA-MIR-548N99.9871.944170
HSA-MIR-548P99.9872.253784
HSA-MIR-477599.9875.006394
HSA-MIR-314899.9775.066478
HSA-MIR-1229-3P99.9766.49906
HSA-MIR-590-3P99.9674.346478
HSA-MIR-545-3P99.9570.742783
HSA-MIR-808299.9567.271170
HSA-MIR-651-3P99.9473.485177
HSA-MIR-9983-3P99.9471.483631
HSA-MIR-4760-3P99.9370.502385
HSA-MIR-6835-3P99.9370.492904
HSA-MIR-145-5P99.9271.131836

Literature-anchored findings (GeneRIF, showing 29)

  • role in cell communication (PMID:11889801)
  • measured differences in CaMKII binding affinities for CaM play a minor role in the autophosphorylation of the enzyme, largely dictated by autophosphorylation rate for alpha, beta, gamma and delta isoforms (PMID:14722083)
  • HDAC4 as a specific downstream substrate of CaMKIIdeltaB in cardiac cells and have broad applications for the signaling pathways leading to cardiac hypertrophy and heart failure. (PMID:17179159)
  • Chronic upregulation/activation of CaMKIID, and PKD in heart failure shifts HDAC5 out of the nucleus, derepressing transcription of hypertrophic genes. (PMID:18218981)
  • The cloned, expressed CAMK2delta6 protein comigrated with D52 kinase and colocalized with D52 protein in T84 and HEK293 cells. These findings support a role for CAMK2delta6 in the mediation of D52 phosphorylation. (PMID:18832449)
  • Calcium/Calmodulin-dependent protein kinase II delta 6 (CaMKIIdelta6) and RhoA is involved in thrombin-induced endothelial barrier dysfunction (PMID:20442409)
  • The crystal structure of the human CaMKIIdelta/Ca2+/CaM complex, is described. (PMID:20668654)
  • This study shows for the first time that CAMKII inhibition acutely improves contractility in human heart failure where CAMKIIdelta expression is increased. (PMID:20814023)
  • Single nucleotide polymorphism in CAMK2D gene is associated with epithelial ovarian cancer. (PMID:21447778)
  • Data show that Pcp4 overexpression induces precocious neuronal differentiation, and is associated with an increase in CaMKIIdelta activation. (PMID:21491429)
  • suggest that CaMKII and calcineurin provide a switch-like mechanism that controls Ca-dependent LIMK1, SSH1L and cofilin activation, and subsequently actin cytoskeletal reorganization (PMID:22270398)
  • End-stage failing human hearts had more phosphorylation at CaMKII-dependent titin sites, contributing to their mechanical dysfunction & establishing a new role for CaMKIIdelta in regulating diastolic passive properties of healthy & diseased hearts. (PMID:23283722)
  • Our studies suggest that CaMKII is a molecular signal that couples increased reactive oxygen species with atrial fibrillation and that therapeutic strategies to decrease oxidized CaMKII may prevent or reduce it. (PMID:24030498)
  • CAMKIIdelta is required for PP1gamma-exacerbated apoptosis of cardiomyocytes. (PMID:24196533)
  • CaMKIID specifically phosphorylates Thr-457 on CEACAM1-SF, which in turn regulates the process of lumen formation via apoptosis of the central acinar cells. (PMID:24302721)
  • This study showed that AKAP12,CAMK2D and a molecular pathway(cyclic amp)association to outcome of depressive during citalopram treatment. (PMID:24986638)
  • Study found a significant association with disordered gambling and rs167771 (DRD3) and with rs381572 (CAMK2D) in humans (PMID:25266122)
  • Reveal a novel in vivo function of CaMKIIdelta in regulating H3 phosphorylation and suggest a novel epigenetic mechanism by which CaMKIIdelta controls cardiac hypertrophy. (PMID:25421395)
  • CaMKIId activity is up-regulated in the myocardium of diabetic patients and mouse models of diabetes, where it promotes pathological signaling that includes hypertrophy, fibrosis and apoptosis. (PMID:26198034)
  • CEACAM1 is able to maintain the active transcription of ID4 by an epigenetic mechanism involving HDAC4 and CaMK2D, and the same kinase enables lumen formation by CEACAM1 (PMID:27302061)
  • CKIalpha-mediated NS5A S235 phosphorylation is critical for HCV replication. CaMKII gamma and delta may have negative roles in the HCV life cycle. (PMID:27875595)
  • TGFbeta elevated the expression of CamK IIbeta and CamK IIdelta, while siRNA silencing of those two subtypes significantly reduced TGFbeta-mediated expression of collagen A1 and fibronectin 1. (PMID:28130256)
  • JNK2 activation up-regulates CaMKIIdelta expression in the aged atrium and may promote the occurrence of cardiac arrhythmias. (PMID:29360953)
  • This study provides new evidence supporting direct interaction between CaMKIIdelta and IKKbeta in pro-inflammatory signalling in cardiac fibroblasts and could represent a feature that may be exploited for therapeutic benefit. (PMID:30059730)
  • Sphingosine kinase 1 regulates HMGB1 translocation by directly interacting with calcium/calmodulin protein kinase II-delta in sepsis-associated liver injury. (PMID:33281190)
  • miR-145-5p affects autophagy by targeting CaMKIIdelta in atherosclerosis. (PMID:35597494)
  • TRPM1 promotes tumor progression in acral melanoma by activating the Ca[2+]/CaMKIIdelta/AKT pathway. (PMID:36585114)
  • CAMK2D serves as a molecular scaffold for RNF8-MAD2 complex to induce mitotic checkpoint in glioma. (PMID:37468549)
  • Role of CAMK2D in neurodevelopment and associated conditions. (PMID:38272033)

Cross-species orthologs

1 orthologs

OrganismSymbolGene ID
danio_reriocamk2d1ENSDARG00000043010

Paralogs (22): CAMKK1 (ENSG00000004660), CAMK1G (ENSG00000008118), CAMK2B (ENSG00000058404), CAMK2A (ENSG00000070808), MYLK2 (ENSG00000101306), CAMKK2 (ENSG00000110931), STK11 (ENSG00000118046), STK33 (ENSG00000130413), PNCK (ENSG00000130822), DCLK1 (ENSG00000133083), CAMK1 (ENSG00000134072), MYLK3 (ENSG00000140795), MYLK4 (ENSG00000145949), PSKH2 (ENSG00000147613), CAMK2G (ENSG00000148660), PHKG2 (ENSG00000156873), PSKH1 (ENSG00000159792), DCLK3 (ENSG00000163673), CAMKV (ENSG00000164076), PHKG1 (ENSG00000164776), DCLK2 (ENSG00000170390), CAMK1D (ENSG00000183049)

Protein

Protein identifiers

Calcium/calmodulin-dependent protein kinase type II subunit deltaQ13557 (reviewed: Q13557)

All UniProt accessions (23): A0A8V8TN60, A0A8V8TN65, A0A8V8TN88, A0A8V8TNA1, A0A8V8TNA7, A0A8V8TND4, A0A8V8TNN4, A0A8V8TNN9, A0A8V8TNR6, A0A8V8TPJ8, A0A8V8TPK3, Q13557, A0A8V8TPM4, A0A8V8TPY4, A0A8V8TQ10, A0A994J516, A0A994J5B0, A0A994J7X8, D6R938, E9PBG7, E9PF82, H0Y9C2, H0Y9J2

UniProt curated annotations — full annotation on UniProt →

Function. Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarcoplasmic reticulum (SR), SR Ca(2+) uptake and Na(+) and K(+) channel transport. Targets also transcription factors and signaling molecules to regulate heart function. In its activated form, is involved in the pathogenesis of dilated cardiomyopathy and heart failure. Contributes to cardiac decompensation and heart failure by regulating SR Ca(2+) release via direct phosphorylation of RYR2 Ca(2+) channel on ‘Ser-2808’. In the nucleus, phosphorylates the MEF2 repressor HDAC4, promoting its nuclear export and binding to 14-3-3 protein, and expression of MEF2 and genes involved in the hypertrophic program. Is essential for left ventricular remodeling responses to myocardial infarction. In pathological myocardial remodeling acts downstream of the beta adrenergic receptor signaling cascade to regulate key proteins involved in ECC. Regulates Ca(2+) influx to myocytes by binding and phosphorylating the L-type Ca(2+) channel subunit beta-2 CACNB2. In addition to Ca(2+) channels, can target and regulate the cardiac sarcolemmal Na(+) channel Nav1.5/SCN5A and the K+ channel Kv4.3/KCND3, which contribute to arrhythmogenesis in heart failure. Phosphorylates phospholamban (PLN/PLB), an endogenous inhibitor of SERCA2A/ATP2A2, contributing to the enhancement of SR Ca(2+) uptake that may be important in frequency-dependent acceleration of relaxation (FDAR) and maintenance of contractile function during acidosis. May participate in the modulation of skeletal muscle function in response to exercise, by regulating SR Ca(2+) transport through phosphorylation of PLN/PLB and triadin, a ryanodine receptor-coupling factor. In response to interferon-gamma (IFN-gamma) stimulation, catalyzes phosphorylation of STAT1, stimulating the JAK-STAT signaling pathway.

Subunit / interactions. CAMK2 is composed of 4 different chains: alpha (CAMK2A), beta (CAMK2B), gamma (CAMK2G), and delta (CAMK2D). The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 12 subunits with two hexameric rings stacked one on top of the other. Interacts with RRAD and CACNB2.

Subcellular location. Cell membrane. Sarcolemma. Sarcoplasmic reticulum membrane.

Tissue specificity. Expressed in cardiac muscle and skeletal muscle. Isoform Delta 3, isoform Delta 2, isoform Delta 8 and isoform Delta 9 are expressed in cardiac muscle. Isoform Delta 11 is expressed in skeletal muscle.

Post-translational modifications. Autophosphorylation of Thr-287 following activation by Ca(2+)/calmodulin. Phosphorylation of Thr-287 locks the kinase into an activated state.

Activity regulation. Activated by Ca(2+)/calmodulin. Binding of calmodulin results in conformational change that relieves intrasteric autoinhibition and allows autophosphorylation of Thr-287 which turns the kinase in a constitutively active form and confers to the kinase a Ca(2+)-independent activity.

Domain organisation. The CAMK2 protein kinases contain a unique C-terminal subunit association domain responsible for oligomerization.

Induction. Activity is induced in skeletal muscle during exercise.

Miscellaneous. Expression of CAMK2D is significantly increased in patients suffering from dilated cardiomyopathy in PubMed:10189359.

Similarity. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.

Isoforms (10)

UniProt IDNamesCanonical?
Q13557-1Delta 2yes
Q13557-3Delta 3
Q13557-4Delta 4
Q13557-8Delta 6
Q13557-9Delta 7
Q13557-5Delta 8
Q13557-6Delta 9
Q13557-10Delta 10
Q13557-11Delta 11
Q13557-12Delta 12

RefSeq proteins (47): NP_001212, NP_001308495, NP_001308496, NP_001308497, NP_001308498, NP_001308499, NP_001308500, NP_001308501, NP_001308502, NP_001308503, NP_001308504, NP_001308505, NP_001308506, NP_001308507, NP_001308508, NP_001308509, NP_001308510, NP_001308511, NP_001308512, NP_001308513, NP_001308514, NP_001308515, NP_001308516, NP_001308517, NP_001308518, NP_001308519, NP_001308520, NP_001383893, NP_001383894, NP_001383895, NP_001383896, NP_001386784, NP_001386785, NP_001386786, NP_001386787, NP_001386788, NP_001386789, NP_001386790, NP_001386791, NP_001386792, NP_001386793, NP_001386794, NP_742112, NP_742113, NP_742125, NP_742126, NP_742127 (=MANE)

Domains & families (InterPro)

IDNameType
IPR000719Prot_kinase_domDomain
IPR008271Ser/Thr_kinase_ASActive_site
IPR011009Kinase-like_dom_sfHomologous_superfamily
IPR013543Ca/CaM-dep_prot_kinase-assocDomain
IPR017441Protein_kinase_ATP_BSBinding_site
IPR032710NTF2-like_dom_sfHomologous_superfamily

Pfam: PF00069, PF08332

Enzyme classification (BRENDA):

  • EC 2.7.11.17 — Ca2+/calmodulin-dependent protein kinase (BRENDA: 38 organisms, 300 substrates, 137 inhibitors, 35 Km, 17 kcat entries)

Substrate kinetics (BRENDA)

12 substrates with measured Km, best-characterized 12. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ATP0.0071–178.2913
BIOTINYLATED THR-ARG-SER-ALA-ILE-ARG-ARG-ALA-SER0.0064–0.01584
GST-TAGGED GLUN2A6.05–11.752
GST-TAGGED GLUN2B0.35–5.932
MAP20.0007–0.00082
CALDESMON0.00491
HISTONE IIIS0.04451
LYS-LYS-ALA-LEU-ARG-ARG-GLN-GLU-ALA-VAL-ASP-ALA-0.0631
MICROTUBULE ASSOCIATED PROTEIN 20.00161
SYNTIDE-20.021
SYNTIDE-2 PEPTIDE0.02211
MYELIN BASIC PROTEIN0

Catalyzed reactions (Rhea), 2 shown:

  • L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
  • L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)

UniProt features (71 total): helix 20, modified residue 15, strand 13, splice variant 6, turn 4, sequence variant 3, region of interest 2, sequence conflict 2, binding site 2, initiator methionine 1, chain 1, domain 1, active site 1

Structure

Experimental structures (PDB)

9 structures.

PDBMethodResolution (Å)
3GP2X-RAY DIFFRACTION1.46
7ZRQX-RAY DIFFRACTION1.68
2WELX-RAY DIFFRACTION1.9
5VLOX-RAY DIFFRACTION2.05
6AYWX-RAY DIFFRACTION2.05
2VN9X-RAY DIFFRACTION2.3
9BLHX-RAY DIFFRACTION2.35
7ZRPX-RAY DIFFRACTION2.65
2W2CX-RAY DIFFRACTION2.7

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q13557-F184.100.60

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (1): 136 (proton acceptor)

Ligand- & substrate-binding residues (2): 20–28; 43

Post-translational modifications (15): 306, 307, 315, 318, 319, 330, 331, 333, 336, 337, 404, 490, 494, 2, 287

Function

Pathways and Gene Ontology

Reactome pathways

60 pathways

IDPathway
R-HSA-111932CaMK IV-mediated phosphorylation of CREB
R-HSA-3371571HSF1-dependent transactivation
R-HSA-399719Trafficking of AMPA receptors
R-HSA-438066Unblocking of NMDA receptors, glutamate binding and activation
R-HSA-442982Ras activation upon Ca2+ influx through NMDA receptor
R-HSA-5576892Phase 0 - rapid depolarisation
R-HSA-5578775Ion homeostasis
R-HSA-5673000RAF activation
R-HSA-5673001RAF/MAP kinase cascade
R-HSA-6802946Signaling by moderate kinase activity BRAF mutants
R-HSA-6802952Signaling by BRAF and RAF1 fusions
R-HSA-6802955Paradoxical activation of RAF signaling by kinase inactive BRAF
R-HSA-877300Interferon gamma signaling
R-HSA-9022692Regulation of MECP2 expression and activity
R-HSA-936837Ion transport by P-type ATPases
R-HSA-9609736Assembly and cell surface presentation of NMDA receptors
R-HSA-9617324Negative regulation of NMDA receptor-mediated neuronal transmission
R-HSA-9620244Long-term potentiation
R-HSA-9649948Signaling downstream of RAS mutants
R-HSA-9656223Signaling by RAF1 mutants
R-HSA-9918481Dengue Virus-Host Interactions
R-HSA-111885Opioid Signalling
R-HSA-111933Calmodulin induced events
R-HSA-111996Ca-dependent events
R-HSA-111997CaM pathway
R-HSA-112040G-protein mediated events
R-HSA-112043PLC beta mediated events
R-HSA-112314Neurotransmitter receptors and postsynaptic signal transmission
R-HSA-112315Transmission across Chemical Synapses
R-HSA-112316Neuronal System

MSigDB gene sets: 497 (showing top): ATF_B, AHRARNT_01, GOBP_MEMBRANE_DEPOLARIZATION, GOBP_NEGATIVE_REGULATION_OF_TRANSMEMBRANE_TRANSPORT, GOBP_NEGATIVE_REGULATION_OF_SODIUM_ION_TRANSPORT, GOBP_CIRCULATORY_SYSTEM_PROCESS, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_REGULATION_OF_NEURONAL_SYNAPTIC_PLASTICITY, GOBP_SODIUM_ION_TRANSMEMBRANE_TRANSPORT, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_GROWTH, GOBP_RELAXATION_OF_CARDIAC_MUSCLE, GOBP_REGULATION_OF_MEMBRANE_DEPOLARIZATION, ACTGCAG_MIR173P, GOBP_PROTEIN_LOCALIZATION_TO_CELL_PERIPHERY

GO Biological Process (27): regulation of cell growth (GO:0001558), regulation of the force of heart contraction (GO:0002026), regulation of membrane depolarization (GO:0003254), regulation of transcription by RNA polymerase II (GO:0006357), protein phosphorylation (GO:0006468), regulation of heart contraction (GO:0008016), positive regulation of cardiac muscle hypertrophy (GO:0010613), regulation of cell communication by electrical coupling (GO:0010649), positive regulation of cardiac muscle cell apoptotic process (GO:0010666), regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (GO:0010880), regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (GO:0010881), endoplasmic reticulum calcium ion homeostasis (GO:0032469), regulation of neuronal synaptic plasticity (GO:0048168), relaxation of cardiac muscle (GO:0055119), long-term synaptic potentiation (GO:0060291), regulation of ryanodine-sensitive calcium-release channel activity (GO:0060314), regulation of cellular localization (GO:0060341), cellular response to calcium ion (GO:0071277), cardiac muscle cell contraction (GO:0086003), regulation of heart rate by cardiac conduction (GO:0086091), regulation of cardiac muscle cell action potential (GO:0098901), regulation of cardiac muscle cell action potential involved in regulation of contraction (GO:0098909), regulation of cell communication by electrical coupling involved in cardiac conduction (GO:1901844), regulation of relaxation of cardiac muscle (GO:1901897), negative regulation of sodium ion transmembrane transport (GO:1902306), regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (GO:1902514), regulation of protein localization to plasma membrane (GO:1903076)

GO Molecular Function (15): protein serine/threonine kinase activity (GO:0004674), calcium/calmodulin-dependent protein kinase activity (GO:0004683), calmodulin binding (GO:0005516), ATP binding (GO:0005524), sodium channel inhibitor activity (GO:0019871), titin binding (GO:0031432), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), transmembrane transporter binding (GO:0044325), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)

GO Cellular Component (13): nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), cytosol (GO:0005829), calcium- and calmodulin-dependent protein kinase complex (GO:0005954), postsynaptic density (GO:0014069), membrane (GO:0016020), endocytic vesicle membrane (GO:0030666), sarcoplasmic reticulum membrane (GO:0033017), sarcolemma (GO:0042383), neuron projection (GO:0043005), plasma membrane (GO:0005886), sarcoplasmic reticulum (GO:0016529)

Reactome top-level categories

Rollup of top-14 pathways:

CategoryPathways
Oncogenic MAPK signaling4
Activation of NMDA receptors and postsynaptic events3
Cardiac conduction2
Calmodulin induced events1
Cellular response to heat stress1
Glutamate binding, activation of AMPA receptors and synaptic plasticity1
CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling1
RAF/MAP kinase cascade1
MAPK1/MAPK3 signaling1
Interferon Signaling1
Transcriptional Regulation by MECP21
Ion channel transport1
Post NMDA receptor activation events1
Signaling by RAS mutants1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure4
protein binding3
regulation of cellular process2
regulation of release of sequestered calcium ion into cytosol2
endoplasmic reticulum2
regulation of synaptic plasticity2
protein kinase activity2
bounding membrane of organelle2
cell growth1
regulation of growth1
regulation of cellular component organization1
regulation of heart contraction1
regulation of biological quality1
regulation of membrane potential1
membrane depolarization1
regulation of DNA-templated transcription1
transcription by RNA polymerase II1
phosphorylation1
protein modification process1
heart contraction1
regulation of blood circulation1
cardiac muscle hypertrophy1
regulation of cardiac muscle hypertrophy1
positive regulation of muscle hypertrophy1
cell communication by electrical coupling1
regulation of cell communication1
cardiac muscle cell apoptotic process1
positive regulation of striated muscle cell apoptotic process1
regulation of cardiac muscle cell apoptotic process1
release of sequestered calcium ion into cytosol by sarcoplasmic reticulum1
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum1
regulation of cardiac muscle contraction by calcium ion signaling1
intracellular calcium ion homeostasis1
relaxation of muscle1
positive regulation of synaptic transmission1
ryanodine-sensitive calcium-release channel activity1
regulation of transmembrane transporter activity1
regulation of localization1
cellular localization1
response to calcium ion1

Protein interactions and networks

STRING

1508 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
CAMK2DADRB1P08588764
CAMK2DRYR2Q92736725
CAMK2DCAMK2AQ9UQM7647
CAMK2DCALM1P02593642
CAMK2DCALML3P27482610
CAMK2DCALML5Q9NZT1608
CAMK2DRBM20Q5T481592
CAMK2DCALML4Q96GE6589
CAMK2DCALML6Q8TD86582
CAMK2DADCY8P40145563
CAMK2DSRSF1Q07955562
CAMK2DPHACTR4Q8IZ21522
CAMK2DGRM3Q14832512
CAMK2DGRIN2AQ12879505
CAMK2DSSH2Q76I76486

IntAct

208 interactions, top by confidence:

ABTypeScore
ACBD6NMT2psi-mi:“MI:0914”(association)0.870
CAMK2ACAMK2Dpsi-mi:“MI:0407”(direct interaction)0.860
MCM5MCM3psi-mi:“MI:0914”(association)0.850
RIN1NRASpsi-mi:“MI:0914”(association)0.840
CAMK2BCAMK2Dpsi-mi:“MI:0407”(direct interaction)0.820
CAMK2BCAMK2Dpsi-mi:“MI:0915”(physical association)0.820
CAMK2GCAMK2Dpsi-mi:“MI:0407”(direct interaction)0.810
CAMK2GCAMK2Dpsi-mi:“MI:0914”(association)0.810
CAMK2DDNAL4psi-mi:“MI:0915”(physical association)0.740
DNAL4CAMK2Dpsi-mi:“MI:0915”(physical association)0.740
CAMK2DCAMK2Dpsi-mi:“MI:0915”(physical association)0.740
CAMK2DCAMK2Dpsi-mi:“MI:0407”(direct interaction)0.740
CAMK2ACAMK2Gpsi-mi:“MI:0914”(association)0.730
CALM1CAMK2Dpsi-mi:“MI:0915”(physical association)0.730
CAMK2DCALM1psi-mi:“MI:0407”(direct interaction)0.730
CFTRESYT2psi-mi:“MI:2364”(proximity)0.710
PKN3ARHGAP10psi-mi:“MI:0914”(association)0.680
TNPO2CAMK2Dpsi-mi:“MI:0915”(physical association)0.670
CAMK2DTTC5psi-mi:“MI:0915”(physical association)0.670
CAMK2DBANPpsi-mi:“MI:0915”(physical association)0.670
MRPL11CAMK2Dpsi-mi:“MI:0915”(physical association)0.670

BioGRID (293): CAMK2D (Two-hybrid), FKBP1B (Two-hybrid), FXR2 (Two-hybrid), DNAL4 (Two-hybrid), TNPO2 (Two-hybrid), BANP (Two-hybrid), MOAP1 (Two-hybrid), FNDC3B (Two-hybrid), MRPL11 (Two-hybrid), TTC5 (Two-hybrid), EPHA10 (Two-hybrid), CAMK2D (Affinity Capture-MS), CAMK2D (Biochemical Activity), CAMK2D (Affinity Capture-MS), CAMK2D (Affinity Capture-MS)

ESM2 similar proteins: A0A087WV53, A1CS92, A2ABU4, A2Q908, A2RUH7, A4QZL9, D3ZHA0, O01761, O70468, O75369, O88599, P05548, P11275, P11730, P11798, P13466, P21333, P56276, P56741, P70402, P79280, Q05623, Q13177, Q13203, Q13557, Q14315, Q2GM53, Q2HJF7, Q2URB7, Q5FW53, Q5PQM4, Q5RCC4, Q5VTT5, Q5ZJJ9, Q5ZKI0, Q62422, Q63518, Q6C1H8, Q6P686, Q6PHZ2

Diamond homologs: A0A2I0BVG8, A0A509AFG4, A0A509AHB6, A0A509AQE6, A0A5K1K8H0, A0AAR7, A2ZVI7, A5A7I7, A5A7I8, B9FKW9, O49717, O70150, O77708, P08414, P11730, P13234, P15791, P28582, P28583, P49101, P53682, P53683, P53684, P62343, P62344, P62345, P93759, Q00168, Q06850, Q07250, Q0DYK7, Q13555, Q13557, Q14012, Q16566, Q1PFH8, Q2QQR2, Q2QVG8, Q2QX45, Q2QY37

SIGNOR signaling

24 interactions.

AEffectBMechanism
CAMK2Dup-regulatesHDAC4phosphorylation
CAMK2DunknownTPD52phosphorylation
CAMK2Dup-regulatesCACNB2phosphorylation
CAMK2Ddown-regulatesSCN5Aphosphorylation
CAMK2Ddown-regulatesKCNJ11phosphorylation
CAMK2Dup-regulatesCEACAM1phosphorylation
calcium(2+)“up-regulates activity”CAMK2D“chemical activation”
CAMK2Dup-regulatesCAMK2Dphosphorylation
CAMK2Dup-regulatesMyoblast_fusion
CAMK2Dup-regulatesMEF2A
CAMK2D“up-regulates activity”SCN5Aphosphorylation
CAMK2D“up-regulates activity”SCN8Aphosphorylation
CAMK2DunknownVIMphosphorylation
CAMK2D“down-regulates activity”ITPR2phosphorylation
CAMK2D“down-regulates activity”ANKRD28phosphorylation
CAMK2D“down-regulates activity”KCNQ1phosphorylation

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 172 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Ras activation upon Ca2+ influx through NMDA receptor523.0×4e-04
Cellular response to heat stress619.1×4e-04
Signaling by RAS mutants517.1×6e-04
Phase 0 - rapid depolarisation616.7×4e-04
Transcriptional Regulation by MECP2615.3×4e-04
Regulation of MECP2 expression and activity514.8×1e-03
RAF activation513.5×1e-03
Signaling by RAF1 mutants613.5×6e-04

GO biological processes:

GO termPartnersFoldFDR
detection of calcium ion536.7×8e-05
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion626.4×5e-05
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum522.0×7e-04
regulation of heart rate515.3×2e-03
regulation of cytokinesis513.8×3e-03
G2/M transition of mitotic cell cycle612.2×2e-03
substantia nigra development512.0×6e-03
long-term synaptic potentiation611.0×2e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

86 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic7
Likely pathogenic2
Uncertain significance49
Likely benign3
Benign2

Top pathogenic / likely-pathogenic (9)

Variant IDHGVSClassification
1343374NM_001321571.2(CAMK2D):c.275+1G>TPathogenic
1343375NM_001321571.2(CAMK2D):c.236G>A (p.Ser79Asn)Pathogenic
1343376NM_001321571.2(CAMK2D):c.416C>T (p.Pro139Leu)Pathogenic
1343377NM_001321571.2(CAMK2D):c.821A>C (p.Gln274Pro)Pathogenic
1343378NM_001321571.2(CAMK2D):c.824G>A (p.Arg275His)Pathogenic
1343379NM_001321571.2(CAMK2D):c.873G>C (p.Leu291Phe)Pathogenic
2442394NM_001321571.2(CAMK2D):c.628G>A (p.Gly210Arg)Pathogenic
1343380NM_001321571.2(CAMK2D):c.881T>C (p.Phe294Ser)Likely pathogenic
4531923NM_001321571.2(CAMK2D):c.328G>A (p.Glu110Lys)Likely pathogenic

SpliceAI

5080 predictions. Top by Δscore:

VariantEffectΔscore
4:113457333:A:ACdonor_gain1.0000
4:113457334:C:CCdonor_gain1.0000
4:113457388:T:Adonor_gain1.0000
4:113457559:CAAAG:Cacceptor_gain1.0000
4:113460237:TTTTT:Tacceptor_gain1.0000
4:113460239:TTT:Tacceptor_gain1.0000
4:113460240:TT:Tacceptor_gain1.0000
4:113460242:C:CCacceptor_gain1.0000
4:113465521:CTACT:Cdonor_loss1.0000
4:113465522:TAC:Tdonor_loss1.0000
4:113465523:AC:Adonor_loss1.0000
4:113465527:A:ACdonor_gain1.0000
4:113465527:AC:Adonor_loss1.0000
4:113465528:C:CAdonor_gain1.0000
4:113465600:TCGTG:Tacceptor_gain1.0000
4:113465601:CGTG:Cacceptor_gain1.0000
4:113465601:CGTGC:Cacceptor_gain1.0000
4:113465602:GTG:Gacceptor_gain1.0000
4:113465603:TG:Tacceptor_gain1.0000
4:113465603:TGC:Tacceptor_loss1.0000
4:113465604:GCTAA:Gacceptor_loss1.0000
4:113465605:C:CCacceptor_gain1.0000
4:113465605:C:Tacceptor_loss1.0000
4:113465606:T:Gacceptor_loss1.0000
4:113508280:A:Tacceptor_gain1.0000
4:113509636:A:ACdonor_gain1.0000
4:113509636:ACCT:Adonor_loss1.0000
4:113509637:C:CCdonor_gain1.0000
4:113509672:GCTG:Gacceptor_loss1.0000
4:113509673:CTG:Cacceptor_gain1.0000

AlphaMissense

3521 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
4:113457384:A:GW462R1.000
4:113457384:A:TW462R1.000
4:113457405:A:GW455R1.000
4:113457405:A:TW455R1.000
4:113457410:C:GR453P1.000
4:113457467:A:GL434P1.000
4:113465560:C:GA360P1.000
4:113465568:A:GL357P1.000
4:113513834:A:GL300P1.000
4:113513839:T:AR298S1.000
4:113513839:T:GR298S1.000
4:113513840:C:GR298T1.000
4:113513851:A:CF294L1.000
4:113513851:A:TF294L1.000
4:113513852:A:GF294S1.000
4:113513853:A:GF294L1.000
4:113513861:A:GL291S1.000
4:113515075:C:AW271C1.000
4:113515075:C:GW271C1.000
4:113515077:A:GW271R1.000
4:113515077:A:TW271R1.000
4:113515110:G:TR260S1.000
4:113515130:A:GL253P1.000
4:113515130:A:TL253H1.000
4:113515133:A:CM252R1.000
4:113515142:A:TI249N1.000
4:113515145:A:GL248P1.000
4:113515150:T:AK246N1.000
4:113515150:T:GK246N1.000
4:113515154:G:TA245D1.000

dbSNP variants (sampled 300 via entrez): RS10000007 (4:113632097 A>C,T), RS1000003392 (4:113516864 T>A), RS1000004353 (4:113495374 C>A), RS1000008172 (4:113588702 A>G), RS1000020241 (4:113492145 G>A,T), RS1000030133 (4:113492376 T>A,G), RS1000040541 (4:113762864 A>G), RS1000055666 (4:113656345 C>T), RS1000058188 (4:113495645 C>T), RS1000061297 (4:113581923 A>C,G), RS10000775 (4:113625533 C>A,T), RS1000081374 (4:113750135 G>A), RS1000087517 (4:113661183 C>T), RS1000096597 (4:113613505 G>A), RS1000108882 (4:113536557 AAGTC>A)

Disease associations

OMIM: gene MIM:607708 | disease phenotypes:

GenCC curated gene-disease

DiseaseClassificationInheritance
complex neurodevelopmental disorderModerateAutosomal dominant
CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathyModerateAutosomal dominant

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathyStrongAD

Mondo (3): neurodevelopmental disorder (MONDO:0700092), CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy (MONDO:1040008), complex neurodevelopmental disorder (MONDO:0100038)

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

27 associations (top):

StudyTraitp-value
GCST001764_3White matter integrity (bipolar disorder risk interaction)4.000000e-06
GCST002299_2Chronic lymphocytic leukemia3.000000e-09
GCST002577_1Non-small cell lung cancer (survival)3.000000e-07
GCST004146_33Chronic lymphocytic leukemia6.000000e-10
GCST004826_6P wave duration4.000000e-08
GCST004902_21Parkinson’s disease5.000000e-11
GCST006061_91Atrial fibrillation9.000000e-09
GCST006061_92Atrial fibrillation2.000000e-09
GCST006414_87Atrial fibrillation2.000000e-13
GCST007045_26PR interval3.000000e-09
GCST007576_173Chronotype4.000000e-09
GCST008156_31Hip circumference adjusted for BMI5.000000e-07
GCST009017_5T wave morphology restitution during recovery from exercise (MTAG)2.000000e-07
GCST009069_5T wave morphology restitution during recovery from exercise3.000000e-08
GCST009325_82Parkinson’s disease or first degree relation to individual with Parkinson’s disease1.000000e-12
GCST010154_1Small vessel stroke (CCS and TOAST classification)1.000000e-08
GCST010321_134PR interval2.000000e-25
GCST010346_37TPE interval (resting)3.000000e-10
GCST010796_1787Electrocardiogram morphology (amplitude at temporal datapoints)2.000000e-18
GCST010796_1788Electrocardiogram morphology (amplitude at temporal datapoints)8.000000e-21
GCST010796_1789Electrocardiogram morphology (amplitude at temporal datapoints)2.000000e-12
GCST010796_1790Electrocardiogram morphology (amplitude at temporal datapoints)7.000000e-09
GCST010796_1791Electrocardiogram morphology (amplitude at temporal datapoints)1.000000e-09
GCST010796_1792Electrocardiogram morphology (amplitude at temporal datapoints)2.000000e-09
GCST010796_1793Electrocardiogram morphology (amplitude at temporal datapoints)1.000000e-24
GCST011010_19Electrocardiographic traits (multivariate)6.000000e-09
GCST012490_522Femur bone mineral density x serum urate levels interaction8.000000e-09

EFO canonical traits (11, from GWAS)

EFO IDTrait name
EFO:0004641white matter integrity
EFO:0000714survival time
EFO:0005094P wave duration
EFO:0004462PR interval
EFO:0008328chronotype measurement
EFO:0008039BMI-adjusted hip circumference
EFO:0008398T wave morphology measurement
EFO:1001504small vessel stroke
EFO:0004644TPE interval measurement
EFO:0004327electrocardiography
EFO:0004531urate measurement

MeSH disease descriptors (1)

DescriptorNameTree numbers
D065886Neurodevelopmental DisordersF03.625

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (2): CHEMBL2097164 (PROTEIN FAMILY), CHEMBL2801 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

40 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 428,016 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1078178MOMELOTINIB43,481
CHEMBL1287853FEDRATINIB43,554
CHEMBL1789941RUXOLITINIB411,547
CHEMBL189963PALBOCICLIB413,102
CHEMBL2103743TOFACITINIB CITRATE41,672
CHEMBL2105759BARICITINIB46,741
CHEMBL221959TOFACITINIB410,408
CHEMBL3301610ABEMACICLIB47,045
CHEMBL3301622GILTERITINIB42,395
CHEMBL3545110RIBOCICLIB48,018
CHEMBL3545311BRIGATINIB45,634
CHEMBL535SUNITINIB479,020
CHEMBL553ERLOTINIB4108,300
CHEMBL608533MIDOSTAURIN47,259
CHEMBL939GEFITINIB4117,814
CHEMBL300138ENZASTAURIN33,209
CHEMBL2105728CRENOLANIB32,167
CHEMBL223360LINIFANIB33,925
CHEMBL428690ALVOCIDIB327,781
CHEMBL522892DOVITINIB34,944
CHEMBL603469LESTAURTINIB3
CHEMBL91829RUBOXISTAURIN3
CHEMBL1721885SU-0148132
CHEMBL1967878CENISERTIB2
CHEMBL1980297ILORASERTIB2
CHEMBL3039513DECERNOTINIB2
CHEMBL3545396BMS-6905142
CHEMBL362558LY-20903142
CHEMBL384304RG-5472
CHEMBL475251R-4062

PharmGKB: 1 entry (VIP=true, CPIC=false)

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: enzyme — CAMK2 family

Most potent curated ligand interactions (3 total), top 3:

LigandActionAffinityParameter
compound 15b [PMID: 18334293]Inhibition8.05pIC50
compound 27 [PMID: 18337095]Inhibition8.0pIC50
MELK-TIInhibition6.09pIC50

Binding affinities (BindingDB)

382 measured of 382 human assays (382 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
2-amino-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.04 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
[(2R)-2-(aminomethyl)piperidin-1-yl]-[2-chloro-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)-4-pyridinyl]methanoneIC500.05 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(methylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.05 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-[(3R)-3-aminopyrrolidin-1-yl]-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.05 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(1H-pyrazol-4-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.05 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(1H-pyrazol-4-ylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.06 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[(2S)-2-(hydroxymethyl)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.06 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[(3R)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.06 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[2-(dimethylamino)ethylamino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.07 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-(3-carbamoylazetidin-1-yl)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.07 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxy-3-methylazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.07 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(2-sulfamoylethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.07 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[(3S)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.07 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-[(3S)-3-aminopyrrolidin-1-yl]-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.07 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(2-methoxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.08 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(1-methylpyrazol-4-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.08 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.09 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[3-(methanesulfonamido)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.09 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-(3-cyanoazetidin-1-yl)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[3-(methylamino)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[3-(dimethylamino)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[3-(hydroxymethyl)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxy-3-methylazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(2-hydroxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(1H-pyrazol-5-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[2-(dimethylamino)ethoxy]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(2-hydroxy-2-methylpropoxy)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.1 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(ethylcarbamoylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.11 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[[(2S)-2-hydroxypropyl]amino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.11 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxypropylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.11 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-fluoroazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.13 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxyazetidin-1-yl)-6-(5-thiophen-3-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.13 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[(3-hydroxy-3-methylbutyl)amino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.13 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(1H-imidazol-2-ylmethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.13 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[1-(oxetan-3-yl)pyrazol-4-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.13 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-methoxy-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-methylsulfonylazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[[(2R)-2-hydroxypropyl]amino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(2-morpholin-4-ylethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[(3S,4S)-3,4-dihydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[(2R)-2-(hydroxymethyl)pyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(3-oxopiperazin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.14 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-(3-acetamidoazetidin-1-yl)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.15 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-[1-(2-cyanoethyl)pyrazol-4-yl]-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.15 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[5-(5-fluorothiophen-2-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-6-[(2S)-2-(methylcarbamoyl)azetidin-1-yl]pyridine-4-carboxamideIC500.15 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-(1,1-dioxo-1,2-thiazolidin-2-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.16 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
N-[(2S)-2-(diethylamino)propyl]-2-[3-(ethylsulfonylamino)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.16 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors
2-(cyclopropanecarbonylamino)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamideIC500.16 nMUS-10100058: Fused heterocyclic compounds as CaM kinase inhibitors

ChEMBL bioactivities

511 potent at pChembl≥5 of 525 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
10.51IC500.0311nMSTAUROSPORINE
10.43IC500.0372nMSTAUROSPORINE
10.30IC500.05nMCHEMBL4218769
10.22IC500.06nMCHEMBL4208018
10.19IC500.0645nMSTAUROSPORINE
10.15IC500.07nMCHEMBL4215817
10.10IC500.08nMCHEMBL4218245
10.05IC500.09nMCHEMBL4217261
10.00IC500.1nMCHEMBL4206514
10.00IC500.1nMCHEMBL4215300
10.00IC500.1nMCHEMBL4210359
9.66IC500.22nMCHEMBL4209816
9.64IC500.23nMCHEMBL4213838
9.55IC500.28nMCHEMBL4210881
9.52IC500.3nMCHEMBL4205997
9.49Kd0.32nMSTAUROSPORINE
9.30Kd0.5nMSTAUROSPORINE
9.04IC500.92nMCHEMBL4209443
8.80IC501.6nMCHEMBL4205708
8.70IC502nMCHEMBL3699625
8.70IC502nMCHEMBL3216550
8.70IC502nMSTAUROSPORINE
8.66IC502.17nMCHEMBL4211430
8.59IC502.6nMABEMACICLIB
8.48IC503.3nMCHEMBL4213305
8.47IC503.4nMCHEMBL4209840
8.46IC503.5nMCHEMBL4210568
8.40IC504nMCHEMBL4208717
8.40Kd4nMCHEMBL4465866
8.40IC504nMSTAUROSPORINE
8.40Ki3.981nMTAE-684
8.30Ki5.012nMCHEMBL1998159
8.24IC505.8nMCHEMBL4216080
8.22Kd6nMCHEMBL4576489
8.22IC506nMSTAUROSPORINE
8.14IC507.2nMCHEMBL4213540
8.11Kd7.861nMCHEMBL5653589
8.10IC508nMCHEMBL3699629
8.06Kd8.8nMLESTAURTINIB
8.05IC509nMCHEMBL270849
8.04IC509.1nMCHEMBL4214345
8.00IC5010nMCHEMBL255607
8.00Ki10nMCHEMBL2002726
7.92IC5012nMCHEMBL272978
7.90Ki12.59nMCHEMBL1991063
7.89IC5013nMCHEMBL402340
7.80Ki15.85nMCHEMBL1970903
7.80Ki15.85nMCHEMBL2001751
7.77IC5017nMCHEMBL3699624
7.72Kd19nMABEMACICLIB

PubChem BioAssay actives

244 with measured affinity, of 2120 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
(2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one1531610: Inhibition of human CAMK2D using KKLNRTLSFAEPG as substrate by [gamma-33P]-ATP assayic50<0.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(2-hydroxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-[(3S)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(2-methoxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(methylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-[(3R)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0001uM
N-[(2S)-2-(diethylamino)propyl]-2-(4-hydroxypiperidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0002uM
N-[(2S)-2-(diethylamino)propyl]-2-(dimethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0002uM
N-[(2S)-2-(diethylamino)propyl]-2-morpholin-4-yl-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0003uM
N-[(2S)-2-(diethylamino)propyl]-2-(2-methoxyethoxy)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0003uM
N-[(2S)-2-(diethylamino)propyl]-2-ethyl-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0009uM
N-[2-(diethylamino)ethyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0016uM
6-chloro-2-N-(3,4-dichlorophenyl)-4-N-[2-(1-methylpyrrolidin-2-yl)ethyl]quinazoline-2,4-diamine;pentahydrochloride641584: Inhibition of human recombinant CAMK2delta using tetramethylbenzidine as substrate by spectrophotometry analysisic500.0020uM
N-[(2S)-1-(diethylamino)propan-2-yl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0022uM
Abemaciclib2199002: Inhibition of human CAMK2delta preincubated with compound for 20 mins followed by [33P]ATP addition and measured after 2 hrs by filter binding methodic500.0026uM
N-[2-(diethylamino)ethyl]-8-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)imidazo[1,2-a]pyridine-6-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0033uM
N-[[(2S)-1-ethylpyrrolidin-2-yl]methyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0034uM
N-[2-(diethylamino)ethyl]-3-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)benzamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0035uM
N-[2-(diethylamino)ethyl]-3-methyl-7-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)benzimidazole-5-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0040uM
3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]amino]ethoxy]ethoxy]ethoxy]ethyl]propanamide1526180: Binding affinity to recombinant human full-length N-terminal GST-tagged CAMK2D expressed in baculovirus expression system using GS peptide as substrate incubated for 1 hr by TR-FRET assaykd0.0040uM
N-[2-(diethylamino)ethyl]-3-(6-thiophen-2-ylimidazo[1,2-b]pyridazin-3-yl)benzamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0058uM
3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]-methylamino]ethoxy]ethoxy]ethoxy]ethyl]propanamide1526180: Binding affinity to recombinant human full-length N-terminal GST-tagged CAMK2D expressed in baculovirus expression system using GS peptide as substrate incubated for 1 hr by TR-FRET assaykd0.0060uM
N-[(2R)-2-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0072uM
4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide2147984: Binding affinity to human CAMK2D incubated for 45 mins by Kinobead based pull down assaykd0.0079uM
(15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one507857: Binding affinity to CAMK2Dkd0.0088uM
N-(3-chlorophenyl)-4-(3-piperazin-1-ylphenyl)pyrimidin-2-amine322069: Inhibition of cloned CaMK2deltaic500.0090uM
N-[3-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0091uM
3-[3-(2-aminoethyl)indol-1-yl]-4-(5-chloro-1H-indol-3-yl)pyrrole-2,5-dione322228: Inhibition of CaMK2deltaic500.0100uM
N’-[3-[2-(3-chloroanilino)pyrimidin-4-yl]phenyl]ethane-1,2-diamine322069: Inhibition of cloned CaMK2deltaic500.0120uM
3-(5-chloro-1H-indol-3-yl)-4-[3-[2-(methylamino)ethyl]indol-1-yl]pyrrole-2,5-dione322228: Inhibition of CaMK2deltaic500.0130uM
methyl 3-[4-[3-[2-(methylamino)ethyl]indol-1-yl]-2,5-dioxopyrrol-3-yl]-1H-indole-5-carboxylate322228: Inhibition of CaMK2deltaic500.0210uM
4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide2147984: Binding affinity to human CAMK2D incubated for 45 mins by Kinobead based pull down assaykd0.0224uM
3,13,23-triazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1,4,6,8,10,15,17,19,21-nonaene-12,14-dione45962: Inhibition of Calcium/calmodulin-dependent protein kinase type IIic500.0250uM
1-[2-(18-methyl-12,14-dioxo-3,13,18-triazahexacyclo[14.7.0.02,10.04,9.011,15.017,21]tricosa-1(16),2(10),4,6,8,11(15),17(21),19,22-nonaen-5-yl)ethyl]piperidine-4-carboxamide45968: Inhibitory activity against Calcium/calmodulin-dependent protein kinase type IIic500.0250uM
Brigatinib2182812: Inhibition of human CAMK2D using KKLNRTLSFAEPG as substrate in presence of [gamma33P]-ATP by HotSpot assayic500.0290uM
3-[3-(2-aminoethyl)indol-1-yl]-4-[5-(trifluoromethyl)-1H-indol-3-yl]pyrrole-2,5-dione322228: Inhibition of CaMK2deltaic500.0320uM
(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-6-[(2-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]-6-[(2-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]propanoyl]amino]-4-methylpentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-oxopentanoyl]amino]-4-carboxybutanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]-3-carboxypropanoyl]amino]propanoyl]amino]-4-methylpentanoic acid220482: Inhibitory activity of compound against CaMKIIic500.0320uM
3-[1-(3-aminopropyl)indol-3-yl]-4-(5-bromo-1H-indol-3-yl)pyrrole-2,5-dione322072: Inhibition of CaMK2deltaic500.0340uM
(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-6-amino-2-[(2-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]hexanoyl]amino]propanoyl]amino]-4-methylpentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-oxopentanoyl]amino]-4-carboxybutanoyl]amino]-3-methylbutanoyl]amino]-3-carboxypropanoyl]amino]propanoyl]amino]-4-methylpentanoic acid220482: Inhibitory activity of compound against CaMKIIic500.0360uM
Midostaurin435647: Binding constant for CAMK2D kinase domainkd0.0360uM
N-[2-(dimethylamino)ethyl]-3-(6-thiophen-2-ylimidazo[1,2-b]pyridazin-3-yl)benzamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0370uM
3-[3-(2-aminoethyl)indol-1-yl]-4-(5-fluoro-1H-indol-3-yl)pyrrole-2,5-dione322228: Inhibition of CaMK2deltaic500.0380uM
3-[1-(3-aminopropyl)indol-3-yl]-4-(1-benzothiophen-3-yl)pyrrole-2,5-dione322227: Inhibition of CaMK2delta using 3 weeks old stock solution of compoundic500.0390uM
N-[2-[di(propan-2-yl)amino]ethyl]-3-(6-thiophen-2-ylimidazo[1,2-b]pyridazin-3-yl)benzamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0410uM
4-[2-(3-chloroanilino)pyrimidin-4-yl]benzoic acid322069: Inhibition of cloned CaMK2deltaic500.0420uM
N-[2-(diethylamino)ethyl]-3-(6-phenylimidazo[1,2-b]pyridazin-3-yl)benzamide1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assayic500.0440uM
3-[4-[3-(2-aminoethyl)indol-1-yl]-2,5-dioxopyrrol-3-yl]-1H-indole-5-carbonitrile322228: Inhibition of CaMK2deltaic500.0460uM

CTD chemical–gene interactions

75 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
methylmercuric chlorideincreases expression, affects cotreatment4
Benzo(a)pyrenedecreases expression4
bisphenol Adecreases expression, affects cotreatment, increases methylation3
mercuric bromideincreases expression, affects cotreatment2
Estradiolaffects cotreatment, increases expression, decreases expression2
Phenylmercuric Acetateaffects cotreatment, increases expression2
Tretinoinincreases expression2
p-Chloromercuribenzoic Acidaffects cotreatment, increases expression2
aristolochic acid Idecreases expression1
GSK-J4increases expression1
FR900359increases phosphorylation1
bisphenol Fincreases expression1
triphenyl phosphateaffects expression1
uranyl acetateaffects expression1
pyrogallol 1,3-dimethyl etheraffects cotreatment, affects localization, decreases expression, increases expression1
tris(1,3-dichloro-2-propyl)phosphateincreases expression1
butyraldehydedecreases expression1
potassium chromate(VI)affects cotreatment, decreases expression1
2,3-bis(3’-hydroxybenzyl)butyrolactoneaffects cotreatment, decreases expression1
aflatoxin B2increases methylation1
epigallocatechin gallatedecreases expression, affects cotreatment1
perfluorooctane sulfonic aciddecreases expression1
CGP 52608affects binding, increases reaction1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
torcetrapibincreases expression1
bisphenol Bincreases expression1
2-amino-14,16-dimethyloctadecan-3-oldecreases expression1
dorsomorphinaffects cotreatment, increases expression1
eprenetapoptaffects expression1
bisphenol Sincreases expression1

ChEMBL screening assays

338 unique, capped per target: 337 binding, 1 functional

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL2422678BindingInhibition of CaMK2alpha/CaMK2beta/CaMK2delta/CaMK2gamma in human PC3 cell lysates at 10 uM using desthiobiotin-tagged ATP probe AX9989 followed by trypsinization by LC/MS analysisHit-to-lead optimization and kinase selectivity of imidazo[1,2-a]quinoxalin-4-amine derived JNK1 inhibitors. — Bioorg Med Chem Lett
CHEMBL1963738FunctionalPUBCHEM_BIOASSAY: Navigating the Kinome. (Class of assay: other) Panel member name: CAMK2DPubChem BioAssay data set

Cellosaurus cell lines

6 cell lines: 4 cancer cell line, 2 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_B2TDAbcam HEK293T CAMK2D KOTransformed cell lineFemale
CVCL_D7LKUbigene A-549 CAMK2D KOCancer cell lineMale
CVCL_D8IBUbigene HCT 116 CAMK2D KOCancer cell lineMale
CVCL_D9AVUbigene HEK293 CAMK2D KOTransformed cell lineFemale
CVCL_D9Z8Ubigene HeLa CAMK2D KOCancer cell lineFemale
CVCL_SG66HAP1 CAMK2D (-)Cancer cell lineMale

Clinical trials (associated diseases)

204 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT04586348PHASE4UNKNOWNPrenatal Iodine Supplementation and Early Childhood Neurodevelopment
NCT04873115PHASE4UNKNOWNDouble-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties,
NCT02559102PHASE3COMPLETEDDexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants
NCT02757079PHASE3COMPLETEDStudy of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders
NCT06915480PHASE3RECRUITINGReducing Missed Appointments
NCT07377032PHASE3RECRUITINGTAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders
NCT02909959PHASE2COMPLETEDSulforaphane for the Treatment of Young Men With Autism Spectrum Disorder
NCT06081348PHASE2RECRUITINGSertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders
NCT06352372PHASE2COMPLETEDSafety and Efficacy of tPBM for Epileptiform Activity in Autism
NCT00503191PHASE1COMPLETEDNeuroModulation Technique Treatment of Autism
NCT04475848PHASE1COMPLETEDA Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants
NCT06300398PHASE1COMPLETEDIAMA-6 Oral Dose Study in Healthy Adults
NCT06310681Not specifiedCOMPLETEDPilot Testing of a Co-adapted Group Programme for Parents/Carers of Children With Complex Neurodisability
NCT07303049Not specifiedNOT_YET_RECRUITINGCognitive Benefit of Intensive Rehabilitation Using Rhythmic Music Training in Children With Complex Neurodevelopmental Disorder
NCT01783041PHASE2/PHASE3COMPLETEDEffect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants
NCT05767385PHASE2/PHASE3RECRUITINGFetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior
NCT05675098EARLY_PHASE1NOT_YET_RECRUITINGCentral Nervous System Stimulants and Physical Function in Children With Cerebral Palsy
NCT00783783Not specifiedCOMPLETEDCYP2D6 Pharmacogenetics in Risperidone-Treated Children
NCT01778504Not specifiedRECRUITINGStudying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders
NCT01850784Not specifiedUNKNOWNHigh Energy Formula Feeding in Infants With Congenital Heart Disease
NCT01922791Not specifiedCOMPLETEDNutrition and Pregnancy Intervention Study
NCT01942525Not specifiedUNKNOWNInfluence of Intrauterine Growth Restriction on Amplitude-integrated EEG in Preterm Infants
NCT02003170Not specifiedCOMPLETEDEtiology and Early Diagnosis of Neurodevelopmental Disorders
NCT02118649Not specifiedACTIVE_NOT_RECRUITINGEnhancing Behavior and Brain Response to Visual Targets Using a Computer Game
NCT02557191Not specifiedTERMINATEDBiomarkers, Neurodevelopment and Preterm Infants
NCT02690675Not specifiedCOMPLETEDIron Supplement Effect on Child Development
NCT02694003Not specifiedCOMPLETEDBetter Nights, Better Days for Children With Neurodevelopment Disorders
NCT02792894Not specifiedCOMPLETEDFamily Networks (FaNs) for Children With Developmental Disorders and Delays
NCT02871674Not specifiedUNKNOWNGood Night Project: Behavioural Sleep Interventions for Children With ADHD: A Randomised Controlled Trial
NCT02887157Not specifiedCOMPLETEDAnalyzing Retinal Microanatomy in ROP
NCT02898298Not specifiedCOMPLETEDPositive Emotion Regulation Training in Children, Adolescents and Young Adults With and Without Developmental Disorder
NCT02912780Not specifiedUNKNOWNIntroduction of Microsystems in a Level 3 Neonatal Intensive Care Unit
NCT03023293Not specifiedCOMPLETEDn-3 PUFAs, Irisin and Maternal Glucose Metabolism From Pregnancy to Postpartum
NCT03023644Not specifiedCOMPLETEDImproving Neurodevelopmental Outcomes in Children With Congenital Heart Disease: An Intervention Study
NCT03032991Not specifiedUNKNOWNEarly Biomarkers of Neurodevelopment in Offspring of Diabetic Mothers
NCT03088189Not specifiedTERMINATEDEffect of Parental Peri-conceptional Vitamin B12 Supplementation on Infant Neurocognitive Development in Offspring
NCT03096028Not specifiedCOMPLETEDDevelopmental Origins of Mental Health Disorders
NCT03148782Not specifiedCOMPLETEDBrain Plasticity Underlying Acquisition of New Organizational Skills in Children-R61 Phase
NCT03172104Not specifiedCOMPLETEDNeurobehavioural Development of Infants Born <30 Weeks Gestational Age Between Birth and Five Years of Age
NCT03222375Not specifiedRECRUITINGSQUED™ Series 28.1 Home-use and Treatment of Autowave Reverberator of Autism