CAMK2D
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Summary
CAMK2D (calcium/calmodulin dependent protein kinase II delta, HGNC:1462) is a protein-coding gene on chromosome 4q26, encoding Calcium/calmodulin-dependent protein kinase type II subunit delta (Q13557). Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarc….
The product of this gene belongs to the serine/threonine protein kinase family and to the Ca(2+)/calmodulin-dependent protein kinase subfamily. Calcium signaling is crucial for several aspects of plasticity at glutamatergic synapses. In mammalian cells, the enzyme is composed of four different chains: alpha, beta, gamma, and delta. The product of this gene is a delta chain. Alternative splicing results in multiple transcript variants encoding distinct isoforms. Distinct isoforms of this chain have different expression patterns.
Source: NCBI Gene 817 — RefSeq curated summary.
At a glance
- Gene–disease (curated): CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy (Strong, ClinGen) — +1 more curated relationship
- GWAS associations: 27
- Clinical variants (ClinVar): 86 total — 7 pathogenic, 2 likely-pathogenic
- Druggable target: yes — 40 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_001321571
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1462 |
| Approved symbol | CAMK2D |
| Name | calcium/calmodulin dependent protein kinase II delta |
| Location | 4q26 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000145349 |
| Ensembl biotype | protein_coding |
| OMIM | 607708 |
| Entrez | 817 |
Gene structure
Transcript identifiers
Ensembl transcripts: 63 — 53 protein_coding, 6 nonsense_mediated_decay, 2 retained_intron, 2 protein_coding_CDS_not_defined
ENST00000296402, ENST00000342666, ENST00000379773, ENST00000394522, ENST00000394524, ENST00000505132, ENST00000505990, ENST00000508738, ENST00000509594, ENST00000509907, ENST00000511664, ENST00000513132, ENST00000514328, ENST00000515496, ENST00000683023, ENST00000699047, ENST00000699048, ENST00000699372, ENST00000699373, ENST00000699374, ENST00000699375, ENST00000699376, ENST00000699377, ENST00000699378, ENST00000699379, ENST00000699380, ENST00000699381, ENST00000699382, ENST00000699415, ENST00000699416, ENST00000699417, ENST00000699418, ENST00000699419, ENST00000699420, ENST00000699421, ENST00000706055, ENST00000706056, ENST00000706057, ENST00000867798, ENST00000867799, ENST00000867800, ENST00000867801, ENST00000867802, ENST00000867803, ENST00000947047, ENST00000947048, ENST00000947049, ENST00000947050, ENST00000947051, ENST00000947052, ENST00000947053, ENST00000947054, ENST00000947055, ENST00000947056, ENST00000947057, ENST00000947058, ENST00000947059, ENST00000947060, ENST00000947061, ENST00000947062, ENST00000947063, ENST00000947064, ENST00000947065
RefSeq mRNA: 48 — MANE Select: NM_001321571
NM_001221, NM_001321566, NM_001321567, NM_001321568, NM_001321569, NM_001321570, NM_001321571, NM_001321572, NM_001321573, NM_001321574, NM_001321575, NM_001321576, NM_001321577, NM_001321578, NM_001321579, NM_001321580, NM_001321581, NM_001321582, NM_001321583, NM_001321584, NM_001321585, NM_001321586, NM_001321587, NM_001321588, NM_001321589, NM_001321590, NM_001321591, NM_001321592, NM_001396964, NM_001396965, NM_001396966, NM_001396967, NM_001399855, NM_001399856, NM_001399857, NM_001399858, NM_001399859, NM_001399860, NM_001399861, NM_001399862, NM_001399863, NM_001399864, NM_001399865, NM_172114, NM_172115, NM_172127, NM_172128, NM_172129
CCDS: CCDS3703, CCDS3704, CCDS43263, CCDS47127, CCDS54797, CCDS82948, CCDS82949, CCDS82950, CCDS93601, CCDS93602, CCDS93603, CCDS93604, CCDS93605, CCDS93606, CCDS93607, CCDS93608, CCDS93609, CCDS93610, CCDS93611, CCDS93612
Canonical transcript exons
ENST00000511664 — 21 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001003903 | 113500463 | 113500511 |
| ENSE00001003911 | 113515069 | 113515191 |
| ENSE00001003913 | 113552031 | 113552096 |
| ENSE00001121155 | 113465529 | 113465604 |
| ENSE00001121166 | 113509638 | 113509675 |
| ENSE00001276264 | 113457335 | 113457563 |
| ENSE00001276352 | 113609152 | 113609206 |
| ENSE00001276388 | 113455726 | 113455821 |
| ENSE00001617342 | 113537341 | 113537443 |
| ENSE00001625946 | 113502936 | 113502977 |
| ENSE00001716426 | 113504976 | 113505035 |
| ENSE00001752494 | 113513328 | 113513370 |
| ENSE00001791998 | 113513830 | 113513913 |
| ENSE00002062068 | 113761004 | 113761738 |
| ENSE00002459857 | 113517563 | 113517657 |
| ENSE00002483543 | 113531216 | 113531299 |
| ENSE00002496111 | 113661713 | 113661772 |
| ENSE00002527351 | 113547644 | 113547716 |
| ENSE00003519737 | 113759320 | 113759414 |
| ENSE00003786791 | 113460147 | 113460241 |
| ENSE00003994638 | 113451032 | 113454515 |
Expression profiles
Bgee: expression breadth ubiquitous, 260 present calls, max score 99.65.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 51.9422 / max 470.7728, expressed in 1753 samples.
FANTOM5 promoters (14 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 53684 | 35.0008 | 1733 |
| 53678 | 4.6475 | 1313 |
| 53679 | 3.6481 | 1263 |
| 53685 | 2.7767 | 1161 |
| 53676 | 2.0617 | 950 |
| 53677 | 0.8428 | 522 |
| 53681 | 0.8268 | 510 |
| 53682 | 0.5994 | 351 |
| 53686 | 0.3976 | 144 |
| 203317 | 0.3787 | 169 |
Top tissues by expression
262 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left ventricle myocardium | UBERON:0006566 | 99.65 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 99.59 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 99.58 | gold quality |
| myocardium | UBERON:0002349 | 99.37 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 99.31 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 99.29 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.07 | gold quality |
| entorhinal cortex | UBERON:0002728 | 98.99 | gold quality |
| tibialis anterior | UBERON:0001385 | 98.96 | gold quality |
| deltoid | UBERON:0001476 | 98.80 | gold quality |
| endothelial cell | CL:0000115 | 98.79 | gold quality |
| pancreatic ductal cell | CL:0002079 | 98.65 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 98.56 | gold quality |
| vastus lateralis | UBERON:0001379 | 98.21 | gold quality |
| quadriceps femoris | UBERON:0001377 | 98.09 | gold quality |
| biceps brachii | UBERON:0001507 | 97.95 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 97.66 | gold quality |
| seminal vesicle | UBERON:0000998 | 97.63 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 97.63 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 97.60 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 97.55 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 97.48 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 97.46 | gold quality |
| ileal mucosa | UBERON:0000331 | 97.42 | gold quality |
| cartilage tissue | UBERON:0002418 | 97.38 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 97.31 | gold quality |
| muscle tissue | UBERON:0002385 | 96.98 | gold quality |
| postcentral gyrus | UBERON:0002581 | 96.83 | gold quality |
| cerebellar vermis | UBERON:0004720 | 96.80 | gold quality |
| cardiac ventricle | UBERON:0002082 | 96.66 | gold quality |
Single-cell (SCXA)
Detected in 7 experiment(s), a significant marker in 5.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-9388 | yes | 11.19 |
| E-MTAB-9801 | yes | 8.49 |
| E-MTAB-6678 | yes | 8.04 |
| E-MTAB-10042 | yes | 7.89 |
| E-HCAD-30 | no | 564.15 |
| E-CURD-112 | no | 2.80 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): NFKB
miRNA regulators (miRDB)
153 targeting CAMK2D, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-4476 | 100.00 | 68.18 | 2030 |
| HSA-MIR-6876-5P | 100.00 | 67.68 | 2126 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-4534 | 99.99 | 66.58 | 1907 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-548P | 99.98 | 72.25 | 3784 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-1229-3P | 99.97 | 66.49 | 906 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-545-3P | 99.95 | 70.74 | 2783 |
| HSA-MIR-8082 | 99.95 | 67.27 | 1170 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-9983-3P | 99.94 | 71.48 | 3631 |
| HSA-MIR-4760-3P | 99.93 | 70.50 | 2385 |
| HSA-MIR-6835-3P | 99.93 | 70.49 | 2904 |
| HSA-MIR-145-5P | 99.92 | 71.13 | 1836 |
Literature-anchored findings (GeneRIF, showing 29)
- role in cell communication (PMID:11889801)
- measured differences in CaMKII binding affinities for CaM play a minor role in the autophosphorylation of the enzyme, largely dictated by autophosphorylation rate for alpha, beta, gamma and delta isoforms (PMID:14722083)
- HDAC4 as a specific downstream substrate of CaMKIIdeltaB in cardiac cells and have broad applications for the signaling pathways leading to cardiac hypertrophy and heart failure. (PMID:17179159)
- Chronic upregulation/activation of CaMKIID, and PKD in heart failure shifts HDAC5 out of the nucleus, derepressing transcription of hypertrophic genes. (PMID:18218981)
- The cloned, expressed CAMK2delta6 protein comigrated with D52 kinase and colocalized with D52 protein in T84 and HEK293 cells. These findings support a role for CAMK2delta6 in the mediation of D52 phosphorylation. (PMID:18832449)
- Calcium/Calmodulin-dependent protein kinase II delta 6 (CaMKIIdelta6) and RhoA is involved in thrombin-induced endothelial barrier dysfunction (PMID:20442409)
- The crystal structure of the human CaMKIIdelta/Ca2+/CaM complex, is described. (PMID:20668654)
- This study shows for the first time that CAMKII inhibition acutely improves contractility in human heart failure where CAMKIIdelta expression is increased. (PMID:20814023)
- Single nucleotide polymorphism in CAMK2D gene is associated with epithelial ovarian cancer. (PMID:21447778)
- Data show that Pcp4 overexpression induces precocious neuronal differentiation, and is associated with an increase in CaMKIIdelta activation. (PMID:21491429)
- suggest that CaMKII and calcineurin provide a switch-like mechanism that controls Ca-dependent LIMK1, SSH1L and cofilin activation, and subsequently actin cytoskeletal reorganization (PMID:22270398)
- End-stage failing human hearts had more phosphorylation at CaMKII-dependent titin sites, contributing to their mechanical dysfunction & establishing a new role for CaMKIIdelta in regulating diastolic passive properties of healthy & diseased hearts. (PMID:23283722)
- Our studies suggest that CaMKII is a molecular signal that couples increased reactive oxygen species with atrial fibrillation and that therapeutic strategies to decrease oxidized CaMKII may prevent or reduce it. (PMID:24030498)
- CAMKIIdelta is required for PP1gamma-exacerbated apoptosis of cardiomyocytes. (PMID:24196533)
- CaMKIID specifically phosphorylates Thr-457 on CEACAM1-SF, which in turn regulates the process of lumen formation via apoptosis of the central acinar cells. (PMID:24302721)
- This study showed that AKAP12,CAMK2D and a molecular pathway(cyclic amp)association to outcome of depressive during citalopram treatment. (PMID:24986638)
- Study found a significant association with disordered gambling and rs167771 (DRD3) and with rs381572 (CAMK2D) in humans (PMID:25266122)
- Reveal a novel in vivo function of CaMKIIdelta in regulating H3 phosphorylation and suggest a novel epigenetic mechanism by which CaMKIIdelta controls cardiac hypertrophy. (PMID:25421395)
- CaMKIId activity is up-regulated in the myocardium of diabetic patients and mouse models of diabetes, where it promotes pathological signaling that includes hypertrophy, fibrosis and apoptosis. (PMID:26198034)
- CEACAM1 is able to maintain the active transcription of ID4 by an epigenetic mechanism involving HDAC4 and CaMK2D, and the same kinase enables lumen formation by CEACAM1 (PMID:27302061)
- CKIalpha-mediated NS5A S235 phosphorylation is critical for HCV replication. CaMKII gamma and delta may have negative roles in the HCV life cycle. (PMID:27875595)
- TGFbeta elevated the expression of CamK IIbeta and CamK IIdelta, while siRNA silencing of those two subtypes significantly reduced TGFbeta-mediated expression of collagen A1 and fibronectin 1. (PMID:28130256)
- JNK2 activation up-regulates CaMKIIdelta expression in the aged atrium and may promote the occurrence of cardiac arrhythmias. (PMID:29360953)
- This study provides new evidence supporting direct interaction between CaMKIIdelta and IKKbeta in pro-inflammatory signalling in cardiac fibroblasts and could represent a feature that may be exploited for therapeutic benefit. (PMID:30059730)
- Sphingosine kinase 1 regulates HMGB1 translocation by directly interacting with calcium/calmodulin protein kinase II-delta in sepsis-associated liver injury. (PMID:33281190)
- miR-145-5p affects autophagy by targeting CaMKIIdelta in atherosclerosis. (PMID:35597494)
- TRPM1 promotes tumor progression in acral melanoma by activating the Ca[2+]/CaMKIIdelta/AKT pathway. (PMID:36585114)
- CAMK2D serves as a molecular scaffold for RNF8-MAD2 complex to induce mitotic checkpoint in glioma. (PMID:37468549)
- Role of CAMK2D in neurodevelopment and associated conditions. (PMID:38272033)
Cross-species orthologs
1 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | camk2d1 | ENSDARG00000043010 |
Paralogs (22): CAMKK1 (ENSG00000004660), CAMK1G (ENSG00000008118), CAMK2B (ENSG00000058404), CAMK2A (ENSG00000070808), MYLK2 (ENSG00000101306), CAMKK2 (ENSG00000110931), STK11 (ENSG00000118046), STK33 (ENSG00000130413), PNCK (ENSG00000130822), DCLK1 (ENSG00000133083), CAMK1 (ENSG00000134072), MYLK3 (ENSG00000140795), MYLK4 (ENSG00000145949), PSKH2 (ENSG00000147613), CAMK2G (ENSG00000148660), PHKG2 (ENSG00000156873), PSKH1 (ENSG00000159792), DCLK3 (ENSG00000163673), CAMKV (ENSG00000164076), PHKG1 (ENSG00000164776), DCLK2 (ENSG00000170390), CAMK1D (ENSG00000183049)
Protein
Protein identifiers
Calcium/calmodulin-dependent protein kinase type II subunit delta — Q13557 (reviewed: Q13557)
All UniProt accessions (23): A0A8V8TN60, A0A8V8TN65, A0A8V8TN88, A0A8V8TNA1, A0A8V8TNA7, A0A8V8TND4, A0A8V8TNN4, A0A8V8TNN9, A0A8V8TNR6, A0A8V8TPJ8, A0A8V8TPK3, Q13557, A0A8V8TPM4, A0A8V8TPY4, A0A8V8TQ10, A0A994J516, A0A994J5B0, A0A994J7X8, D6R938, E9PBG7, E9PF82, H0Y9C2, H0Y9J2
UniProt curated annotations — full annotation on UniProt →
Function. Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarcoplasmic reticulum (SR), SR Ca(2+) uptake and Na(+) and K(+) channel transport. Targets also transcription factors and signaling molecules to regulate heart function. In its activated form, is involved in the pathogenesis of dilated cardiomyopathy and heart failure. Contributes to cardiac decompensation and heart failure by regulating SR Ca(2+) release via direct phosphorylation of RYR2 Ca(2+) channel on ‘Ser-2808’. In the nucleus, phosphorylates the MEF2 repressor HDAC4, promoting its nuclear export and binding to 14-3-3 protein, and expression of MEF2 and genes involved in the hypertrophic program. Is essential for left ventricular remodeling responses to myocardial infarction. In pathological myocardial remodeling acts downstream of the beta adrenergic receptor signaling cascade to regulate key proteins involved in ECC. Regulates Ca(2+) influx to myocytes by binding and phosphorylating the L-type Ca(2+) channel subunit beta-2 CACNB2. In addition to Ca(2+) channels, can target and regulate the cardiac sarcolemmal Na(+) channel Nav1.5/SCN5A and the K+ channel Kv4.3/KCND3, which contribute to arrhythmogenesis in heart failure. Phosphorylates phospholamban (PLN/PLB), an endogenous inhibitor of SERCA2A/ATP2A2, contributing to the enhancement of SR Ca(2+) uptake that may be important in frequency-dependent acceleration of relaxation (FDAR) and maintenance of contractile function during acidosis. May participate in the modulation of skeletal muscle function in response to exercise, by regulating SR Ca(2+) transport through phosphorylation of PLN/PLB and triadin, a ryanodine receptor-coupling factor. In response to interferon-gamma (IFN-gamma) stimulation, catalyzes phosphorylation of STAT1, stimulating the JAK-STAT signaling pathway.
Subunit / interactions. CAMK2 is composed of 4 different chains: alpha (CAMK2A), beta (CAMK2B), gamma (CAMK2G), and delta (CAMK2D). The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 12 subunits with two hexameric rings stacked one on top of the other. Interacts with RRAD and CACNB2.
Subcellular location. Cell membrane. Sarcolemma. Sarcoplasmic reticulum membrane.
Tissue specificity. Expressed in cardiac muscle and skeletal muscle. Isoform Delta 3, isoform Delta 2, isoform Delta 8 and isoform Delta 9 are expressed in cardiac muscle. Isoform Delta 11 is expressed in skeletal muscle.
Post-translational modifications. Autophosphorylation of Thr-287 following activation by Ca(2+)/calmodulin. Phosphorylation of Thr-287 locks the kinase into an activated state.
Activity regulation. Activated by Ca(2+)/calmodulin. Binding of calmodulin results in conformational change that relieves intrasteric autoinhibition and allows autophosphorylation of Thr-287 which turns the kinase in a constitutively active form and confers to the kinase a Ca(2+)-independent activity.
Domain organisation. The CAMK2 protein kinases contain a unique C-terminal subunit association domain responsible for oligomerization.
Induction. Activity is induced in skeletal muscle during exercise.
Miscellaneous. Expression of CAMK2D is significantly increased in patients suffering from dilated cardiomyopathy in PubMed:10189359.
Similarity. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. CaMK subfamily.
Isoforms (10)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q13557-1 | Delta 2 | yes |
| Q13557-3 | Delta 3 | |
| Q13557-4 | Delta 4 | |
| Q13557-8 | Delta 6 | |
| Q13557-9 | Delta 7 | |
| Q13557-5 | Delta 8 | |
| Q13557-6 | Delta 9 | |
| Q13557-10 | Delta 10 | |
| Q13557-11 | Delta 11 | |
| Q13557-12 | Delta 12 |
RefSeq proteins (47): NP_001212, NP_001308495, NP_001308496, NP_001308497, NP_001308498, NP_001308499, NP_001308500, NP_001308501, NP_001308502, NP_001308503, NP_001308504, NP_001308505, NP_001308506, NP_001308507, NP_001308508, NP_001308509, NP_001308510, NP_001308511, NP_001308512, NP_001308513, NP_001308514, NP_001308515, NP_001308516, NP_001308517, NP_001308518, NP_001308519, NP_001308520, NP_001383893, NP_001383894, NP_001383895, NP_001383896, NP_001386784, NP_001386785, NP_001386786, NP_001386787, NP_001386788, NP_001386789, NP_001386790, NP_001386791, NP_001386792, NP_001386793, NP_001386794, NP_742112, NP_742113, NP_742125, NP_742126, NP_742127 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000719 | Prot_kinase_dom | Domain |
| IPR008271 | Ser/Thr_kinase_AS | Active_site |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR013543 | Ca/CaM-dep_prot_kinase-assoc | Domain |
| IPR017441 | Protein_kinase_ATP_BS | Binding_site |
| IPR032710 | NTF2-like_dom_sf | Homologous_superfamily |
Pfam: PF00069, PF08332
Enzyme classification (BRENDA):
- EC 2.7.11.17 — Ca2+/calmodulin-dependent protein kinase (BRENDA: 38 organisms, 300 substrates, 137 inhibitors, 35 Km, 17 kcat entries)
Substrate kinetics (BRENDA)
12 substrates with measured Km, best-characterized 12. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0071–178.29 | 13 |
| BIOTINYLATED THR-ARG-SER-ALA-ILE-ARG-ARG-ALA-SER | 0.0064–0.0158 | 4 |
| GST-TAGGED GLUN2A | 6.05–11.75 | 2 |
| GST-TAGGED GLUN2B | 0.35–5.93 | 2 |
| MAP2 | 0.0007–0.0008 | 2 |
| CALDESMON | 0.0049 | 1 |
| HISTONE IIIS | 0.0445 | 1 |
| LYS-LYS-ALA-LEU-ARG-ARG-GLN-GLU-ALA-VAL-ASP-ALA- | 0.063 | 1 |
| MICROTUBULE ASSOCIATED PROTEIN 2 | 0.0016 | 1 |
| SYNTIDE-2 | 0.02 | 1 |
| SYNTIDE-2 PEPTIDE | 0.0221 | 1 |
| MYELIN BASIC PROTEIN | — | 0 |
Catalyzed reactions (Rhea), 2 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (71 total): helix 20, modified residue 15, strand 13, splice variant 6, turn 4, sequence variant 3, region of interest 2, sequence conflict 2, binding site 2, initiator methionine 1, chain 1, domain 1, active site 1
Structure
Experimental structures (PDB)
9 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3GP2 | X-RAY DIFFRACTION | 1.46 |
| 7ZRQ | X-RAY DIFFRACTION | 1.68 |
| 2WEL | X-RAY DIFFRACTION | 1.9 |
| 5VLO | X-RAY DIFFRACTION | 2.05 |
| 6AYW | X-RAY DIFFRACTION | 2.05 |
| 2VN9 | X-RAY DIFFRACTION | 2.3 |
| 9BLH | X-RAY DIFFRACTION | 2.35 |
| 7ZRP | X-RAY DIFFRACTION | 2.65 |
| 2W2C | X-RAY DIFFRACTION | 2.7 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q13557-F1 | 84.10 | 0.60 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 136 (proton acceptor)
Ligand- & substrate-binding residues (2): 20–28; 43
Post-translational modifications (15): 306, 307, 315, 318, 319, 330, 331, 333, 336, 337, 404, 490, 494, 2, 287
Function
Pathways and Gene Ontology
Reactome pathways
60 pathways
| ID | Pathway |
|---|---|
| R-HSA-111932 | CaMK IV-mediated phosphorylation of CREB |
| R-HSA-3371571 | HSF1-dependent transactivation |
| R-HSA-399719 | Trafficking of AMPA receptors |
| R-HSA-438066 | Unblocking of NMDA receptors, glutamate binding and activation |
| R-HSA-442982 | Ras activation upon Ca2+ influx through NMDA receptor |
| R-HSA-5576892 | Phase 0 - rapid depolarisation |
| R-HSA-5578775 | Ion homeostasis |
| R-HSA-5673000 | RAF activation |
| R-HSA-5673001 | RAF/MAP kinase cascade |
| R-HSA-6802946 | Signaling by moderate kinase activity BRAF mutants |
| R-HSA-6802952 | Signaling by BRAF and RAF1 fusions |
| R-HSA-6802955 | Paradoxical activation of RAF signaling by kinase inactive BRAF |
| R-HSA-877300 | Interferon gamma signaling |
| R-HSA-9022692 | Regulation of MECP2 expression and activity |
| R-HSA-936837 | Ion transport by P-type ATPases |
| R-HSA-9609736 | Assembly and cell surface presentation of NMDA receptors |
| R-HSA-9617324 | Negative regulation of NMDA receptor-mediated neuronal transmission |
| R-HSA-9620244 | Long-term potentiation |
| R-HSA-9649948 | Signaling downstream of RAS mutants |
| R-HSA-9656223 | Signaling by RAF1 mutants |
| R-HSA-9918481 | Dengue Virus-Host Interactions |
| R-HSA-111885 | Opioid Signalling |
| R-HSA-111933 | Calmodulin induced events |
| R-HSA-111996 | Ca-dependent events |
| R-HSA-111997 | CaM pathway |
| R-HSA-112040 | G-protein mediated events |
| R-HSA-112043 | PLC beta mediated events |
| R-HSA-112314 | Neurotransmitter receptors and postsynaptic signal transmission |
| R-HSA-112315 | Transmission across Chemical Synapses |
| R-HSA-112316 | Neuronal System |
MSigDB gene sets: 497 (showing top):
ATF_B, AHRARNT_01, GOBP_MEMBRANE_DEPOLARIZATION, GOBP_NEGATIVE_REGULATION_OF_TRANSMEMBRANE_TRANSPORT, GOBP_NEGATIVE_REGULATION_OF_SODIUM_ION_TRANSPORT, GOBP_CIRCULATORY_SYSTEM_PROCESS, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_REGULATION_OF_NEURONAL_SYNAPTIC_PLASTICITY, GOBP_SODIUM_ION_TRANSMEMBRANE_TRANSPORT, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_GROWTH, GOBP_RELAXATION_OF_CARDIAC_MUSCLE, GOBP_REGULATION_OF_MEMBRANE_DEPOLARIZATION, ACTGCAG_MIR173P, GOBP_PROTEIN_LOCALIZATION_TO_CELL_PERIPHERY
GO Biological Process (27): regulation of cell growth (GO:0001558), regulation of the force of heart contraction (GO:0002026), regulation of membrane depolarization (GO:0003254), regulation of transcription by RNA polymerase II (GO:0006357), protein phosphorylation (GO:0006468), regulation of heart contraction (GO:0008016), positive regulation of cardiac muscle hypertrophy (GO:0010613), regulation of cell communication by electrical coupling (GO:0010649), positive regulation of cardiac muscle cell apoptotic process (GO:0010666), regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (GO:0010880), regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (GO:0010881), endoplasmic reticulum calcium ion homeostasis (GO:0032469), regulation of neuronal synaptic plasticity (GO:0048168), relaxation of cardiac muscle (GO:0055119), long-term synaptic potentiation (GO:0060291), regulation of ryanodine-sensitive calcium-release channel activity (GO:0060314), regulation of cellular localization (GO:0060341), cellular response to calcium ion (GO:0071277), cardiac muscle cell contraction (GO:0086003), regulation of heart rate by cardiac conduction (GO:0086091), regulation of cardiac muscle cell action potential (GO:0098901), regulation of cardiac muscle cell action potential involved in regulation of contraction (GO:0098909), regulation of cell communication by electrical coupling involved in cardiac conduction (GO:1901844), regulation of relaxation of cardiac muscle (GO:1901897), negative regulation of sodium ion transmembrane transport (GO:1902306), regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (GO:1902514), regulation of protein localization to plasma membrane (GO:1903076)
GO Molecular Function (15): protein serine/threonine kinase activity (GO:0004674), calcium/calmodulin-dependent protein kinase activity (GO:0004683), calmodulin binding (GO:0005516), ATP binding (GO:0005524), sodium channel inhibitor activity (GO:0019871), titin binding (GO:0031432), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), transmembrane transporter binding (GO:0044325), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), protein kinase activity (GO:0004672), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (13): nucleus (GO:0005634), nucleoplasm (GO:0005654), cytoplasm (GO:0005737), cytosol (GO:0005829), calcium- and calmodulin-dependent protein kinase complex (GO:0005954), postsynaptic density (GO:0014069), membrane (GO:0016020), endocytic vesicle membrane (GO:0030666), sarcoplasmic reticulum membrane (GO:0033017), sarcolemma (GO:0042383), neuron projection (GO:0043005), plasma membrane (GO:0005886), sarcoplasmic reticulum (GO:0016529)
Reactome top-level categories
Rollup of top-14 pathways:
| Category | Pathways |
|---|---|
| Oncogenic MAPK signaling | 4 |
| Activation of NMDA receptors and postsynaptic events | 3 |
| Cardiac conduction | 2 |
| Calmodulin induced events | 1 |
| Cellular response to heat stress | 1 |
| Glutamate binding, activation of AMPA receptors and synaptic plasticity | 1 |
| CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling | 1 |
| RAF/MAP kinase cascade | 1 |
| MAPK1/MAPK3 signaling | 1 |
| Interferon Signaling | 1 |
| Transcriptional Regulation by MECP2 | 1 |
| Ion channel transport | 1 |
| Post NMDA receptor activation events | 1 |
| Signaling by RAS mutants | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| protein binding | 3 |
| regulation of cellular process | 2 |
| regulation of release of sequestered calcium ion into cytosol | 2 |
| endoplasmic reticulum | 2 |
| regulation of synaptic plasticity | 2 |
| protein kinase activity | 2 |
| bounding membrane of organelle | 2 |
| cell growth | 1 |
| regulation of growth | 1 |
| regulation of cellular component organization | 1 |
| regulation of heart contraction | 1 |
| regulation of biological quality | 1 |
| regulation of membrane potential | 1 |
| membrane depolarization | 1 |
| regulation of DNA-templated transcription | 1 |
| transcription by RNA polymerase II | 1 |
| phosphorylation | 1 |
| protein modification process | 1 |
| heart contraction | 1 |
| regulation of blood circulation | 1 |
| cardiac muscle hypertrophy | 1 |
| regulation of cardiac muscle hypertrophy | 1 |
| positive regulation of muscle hypertrophy | 1 |
| cell communication by electrical coupling | 1 |
| regulation of cell communication | 1 |
| cardiac muscle cell apoptotic process | 1 |
| positive regulation of striated muscle cell apoptotic process | 1 |
| regulation of cardiac muscle cell apoptotic process | 1 |
| release of sequestered calcium ion into cytosol by sarcoplasmic reticulum | 1 |
| regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum | 1 |
| regulation of cardiac muscle contraction by calcium ion signaling | 1 |
| intracellular calcium ion homeostasis | 1 |
| relaxation of muscle | 1 |
| positive regulation of synaptic transmission | 1 |
| ryanodine-sensitive calcium-release channel activity | 1 |
| regulation of transmembrane transporter activity | 1 |
| regulation of localization | 1 |
| cellular localization | 1 |
| response to calcium ion | 1 |
Protein interactions and networks
STRING
1508 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CAMK2D | ADRB1 | P08588 | 764 |
| CAMK2D | RYR2 | Q92736 | 725 |
| CAMK2D | CAMK2A | Q9UQM7 | 647 |
| CAMK2D | CALM1 | P02593 | 642 |
| CAMK2D | CALML3 | P27482 | 610 |
| CAMK2D | CALML5 | Q9NZT1 | 608 |
| CAMK2D | RBM20 | Q5T481 | 592 |
| CAMK2D | CALML4 | Q96GE6 | 589 |
| CAMK2D | CALML6 | Q8TD86 | 582 |
| CAMK2D | ADCY8 | P40145 | 563 |
| CAMK2D | SRSF1 | Q07955 | 562 |
| CAMK2D | PHACTR4 | Q8IZ21 | 522 |
| CAMK2D | GRM3 | Q14832 | 512 |
| CAMK2D | GRIN2A | Q12879 | 505 |
| CAMK2D | SSH2 | Q76I76 | 486 |
IntAct
208 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ACBD6 | NMT2 | psi-mi:“MI:0914”(association) | 0.870 |
| CAMK2A | CAMK2D | psi-mi:“MI:0407”(direct interaction) | 0.860 |
| MCM5 | MCM3 | psi-mi:“MI:0914”(association) | 0.850 |
| RIN1 | NRAS | psi-mi:“MI:0914”(association) | 0.840 |
| CAMK2B | CAMK2D | psi-mi:“MI:0407”(direct interaction) | 0.820 |
| CAMK2B | CAMK2D | psi-mi:“MI:0915”(physical association) | 0.820 |
| CAMK2G | CAMK2D | psi-mi:“MI:0407”(direct interaction) | 0.810 |
| CAMK2G | CAMK2D | psi-mi:“MI:0914”(association) | 0.810 |
| CAMK2D | DNAL4 | psi-mi:“MI:0915”(physical association) | 0.740 |
| DNAL4 | CAMK2D | psi-mi:“MI:0915”(physical association) | 0.740 |
| CAMK2D | CAMK2D | psi-mi:“MI:0915”(physical association) | 0.740 |
| CAMK2D | CAMK2D | psi-mi:“MI:0407”(direct interaction) | 0.740 |
| CAMK2A | CAMK2G | psi-mi:“MI:0914”(association) | 0.730 |
| CALM1 | CAMK2D | psi-mi:“MI:0915”(physical association) | 0.730 |
| CAMK2D | CALM1 | psi-mi:“MI:0407”(direct interaction) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| PKN3 | ARHGAP10 | psi-mi:“MI:0914”(association) | 0.680 |
| TNPO2 | CAMK2D | psi-mi:“MI:0915”(physical association) | 0.670 |
| CAMK2D | TTC5 | psi-mi:“MI:0915”(physical association) | 0.670 |
| CAMK2D | BANP | psi-mi:“MI:0915”(physical association) | 0.670 |
| MRPL11 | CAMK2D | psi-mi:“MI:0915”(physical association) | 0.670 |
BioGRID (293): CAMK2D (Two-hybrid), FKBP1B (Two-hybrid), FXR2 (Two-hybrid), DNAL4 (Two-hybrid), TNPO2 (Two-hybrid), BANP (Two-hybrid), MOAP1 (Two-hybrid), FNDC3B (Two-hybrid), MRPL11 (Two-hybrid), TTC5 (Two-hybrid), EPHA10 (Two-hybrid), CAMK2D (Affinity Capture-MS), CAMK2D (Biochemical Activity), CAMK2D (Affinity Capture-MS), CAMK2D (Affinity Capture-MS)
ESM2 similar proteins: A0A087WV53, A1CS92, A2ABU4, A2Q908, A2RUH7, A4QZL9, D3ZHA0, O01761, O70468, O75369, O88599, P05548, P11275, P11730, P11798, P13466, P21333, P56276, P56741, P70402, P79280, Q05623, Q13177, Q13203, Q13557, Q14315, Q2GM53, Q2HJF7, Q2URB7, Q5FW53, Q5PQM4, Q5RCC4, Q5VTT5, Q5ZJJ9, Q5ZKI0, Q62422, Q63518, Q6C1H8, Q6P686, Q6PHZ2
Diamond homologs: A0A2I0BVG8, A0A509AFG4, A0A509AHB6, A0A509AQE6, A0A5K1K8H0, A0AAR7, A2ZVI7, A5A7I7, A5A7I8, B9FKW9, O49717, O70150, O77708, P08414, P11730, P13234, P15791, P28582, P28583, P49101, P53682, P53683, P53684, P62343, P62344, P62345, P93759, Q00168, Q06850, Q07250, Q0DYK7, Q13555, Q13557, Q14012, Q16566, Q1PFH8, Q2QQR2, Q2QVG8, Q2QX45, Q2QY37
SIGNOR signaling
24 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| CAMK2D | up-regulates | HDAC4 | phosphorylation |
| CAMK2D | unknown | TPD52 | phosphorylation |
| CAMK2D | up-regulates | CACNB2 | phosphorylation |
| CAMK2D | down-regulates | SCN5A | phosphorylation |
| CAMK2D | down-regulates | KCNJ11 | phosphorylation |
| CAMK2D | up-regulates | CEACAM1 | phosphorylation |
| calcium(2+) | “up-regulates activity” | CAMK2D | “chemical activation” |
| CAMK2D | up-regulates | CAMK2D | phosphorylation |
| CAMK2D | up-regulates | Myoblast_fusion | |
| CAMK2D | up-regulates | MEF2A | |
| CAMK2D | “up-regulates activity” | SCN5A | phosphorylation |
| CAMK2D | “up-regulates activity” | SCN8A | phosphorylation |
| CAMK2D | unknown | VIM | phosphorylation |
| CAMK2D | “down-regulates activity” | ITPR2 | phosphorylation |
| CAMK2D | “down-regulates activity” | ANKRD28 | phosphorylation |
| CAMK2D | “down-regulates activity” | KCNQ1 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 172 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Ras activation upon Ca2+ influx through NMDA receptor | 5 | 23.0× | 4e-04 |
| Cellular response to heat stress | 6 | 19.1× | 4e-04 |
| Signaling by RAS mutants | 5 | 17.1× | 6e-04 |
| Phase 0 - rapid depolarisation | 6 | 16.7× | 4e-04 |
| Transcriptional Regulation by MECP2 | 6 | 15.3× | 4e-04 |
| Regulation of MECP2 expression and activity | 5 | 14.8× | 1e-03 |
| RAF activation | 5 | 13.5× | 1e-03 |
| Signaling by RAF1 mutants | 6 | 13.5× | 6e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| detection of calcium ion | 5 | 36.7× | 8e-05 |
| regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion | 6 | 26.4× | 5e-05 |
| regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum | 5 | 22.0× | 7e-04 |
| regulation of heart rate | 5 | 15.3× | 2e-03 |
| regulation of cytokinesis | 5 | 13.8× | 3e-03 |
| G2/M transition of mitotic cell cycle | 6 | 12.2× | 2e-03 |
| substantia nigra development | 5 | 12.0× | 6e-03 |
| long-term synaptic potentiation | 6 | 11.0× | 2e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
86 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 7 |
| Likely pathogenic | 2 |
| Uncertain significance | 49 |
| Likely benign | 3 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (9)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1343374 | NM_001321571.2(CAMK2D):c.275+1G>T | Pathogenic |
| 1343375 | NM_001321571.2(CAMK2D):c.236G>A (p.Ser79Asn) | Pathogenic |
| 1343376 | NM_001321571.2(CAMK2D):c.416C>T (p.Pro139Leu) | Pathogenic |
| 1343377 | NM_001321571.2(CAMK2D):c.821A>C (p.Gln274Pro) | Pathogenic |
| 1343378 | NM_001321571.2(CAMK2D):c.824G>A (p.Arg275His) | Pathogenic |
| 1343379 | NM_001321571.2(CAMK2D):c.873G>C (p.Leu291Phe) | Pathogenic |
| 2442394 | NM_001321571.2(CAMK2D):c.628G>A (p.Gly210Arg) | Pathogenic |
| 1343380 | NM_001321571.2(CAMK2D):c.881T>C (p.Phe294Ser) | Likely pathogenic |
| 4531923 | NM_001321571.2(CAMK2D):c.328G>A (p.Glu110Lys) | Likely pathogenic |
SpliceAI
5080 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:113457333:A:AC | donor_gain | 1.0000 |
| 4:113457334:C:CC | donor_gain | 1.0000 |
| 4:113457388:T:A | donor_gain | 1.0000 |
| 4:113457559:CAAAG:C | acceptor_gain | 1.0000 |
| 4:113460237:TTTTT:T | acceptor_gain | 1.0000 |
| 4:113460239:TTT:T | acceptor_gain | 1.0000 |
| 4:113460240:TT:T | acceptor_gain | 1.0000 |
| 4:113460242:C:CC | acceptor_gain | 1.0000 |
| 4:113465521:CTACT:C | donor_loss | 1.0000 |
| 4:113465522:TAC:T | donor_loss | 1.0000 |
| 4:113465523:AC:A | donor_loss | 1.0000 |
| 4:113465527:A:AC | donor_gain | 1.0000 |
| 4:113465527:AC:A | donor_loss | 1.0000 |
| 4:113465528:C:CA | donor_gain | 1.0000 |
| 4:113465600:TCGTG:T | acceptor_gain | 1.0000 |
| 4:113465601:CGTG:C | acceptor_gain | 1.0000 |
| 4:113465601:CGTGC:C | acceptor_gain | 1.0000 |
| 4:113465602:GTG:G | acceptor_gain | 1.0000 |
| 4:113465603:TG:T | acceptor_gain | 1.0000 |
| 4:113465603:TGC:T | acceptor_loss | 1.0000 |
| 4:113465604:GCTAA:G | acceptor_loss | 1.0000 |
| 4:113465605:C:CC | acceptor_gain | 1.0000 |
| 4:113465605:C:T | acceptor_loss | 1.0000 |
| 4:113465606:T:G | acceptor_loss | 1.0000 |
| 4:113508280:A:T | acceptor_gain | 1.0000 |
| 4:113509636:A:AC | donor_gain | 1.0000 |
| 4:113509636:ACCT:A | donor_loss | 1.0000 |
| 4:113509637:C:CC | donor_gain | 1.0000 |
| 4:113509672:GCTG:G | acceptor_loss | 1.0000 |
| 4:113509673:CTG:C | acceptor_gain | 1.0000 |
AlphaMissense
3521 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:113457384:A:G | W462R | 1.000 |
| 4:113457384:A:T | W462R | 1.000 |
| 4:113457405:A:G | W455R | 1.000 |
| 4:113457405:A:T | W455R | 1.000 |
| 4:113457410:C:G | R453P | 1.000 |
| 4:113457467:A:G | L434P | 1.000 |
| 4:113465560:C:G | A360P | 1.000 |
| 4:113465568:A:G | L357P | 1.000 |
| 4:113513834:A:G | L300P | 1.000 |
| 4:113513839:T:A | R298S | 1.000 |
| 4:113513839:T:G | R298S | 1.000 |
| 4:113513840:C:G | R298T | 1.000 |
| 4:113513851:A:C | F294L | 1.000 |
| 4:113513851:A:T | F294L | 1.000 |
| 4:113513852:A:G | F294S | 1.000 |
| 4:113513853:A:G | F294L | 1.000 |
| 4:113513861:A:G | L291S | 1.000 |
| 4:113515075:C:A | W271C | 1.000 |
| 4:113515075:C:G | W271C | 1.000 |
| 4:113515077:A:G | W271R | 1.000 |
| 4:113515077:A:T | W271R | 1.000 |
| 4:113515110:G:T | R260S | 1.000 |
| 4:113515130:A:G | L253P | 1.000 |
| 4:113515130:A:T | L253H | 1.000 |
| 4:113515133:A:C | M252R | 1.000 |
| 4:113515142:A:T | I249N | 1.000 |
| 4:113515145:A:G | L248P | 1.000 |
| 4:113515150:T:A | K246N | 1.000 |
| 4:113515150:T:G | K246N | 1.000 |
| 4:113515154:G:T | A245D | 1.000 |
dbSNP variants (sampled 300 via entrez): RS10000007 (4:113632097 A>C,T), RS1000003392 (4:113516864 T>A), RS1000004353 (4:113495374 C>A), RS1000008172 (4:113588702 A>G), RS1000020241 (4:113492145 G>A,T), RS1000030133 (4:113492376 T>A,G), RS1000040541 (4:113762864 A>G), RS1000055666 (4:113656345 C>T), RS1000058188 (4:113495645 C>T), RS1000061297 (4:113581923 A>C,G), RS10000775 (4:113625533 C>A,T), RS1000081374 (4:113750135 G>A), RS1000087517 (4:113661183 C>T), RS1000096597 (4:113613505 G>A), RS1000108882 (4:113536557 AAGTC>A)
Disease associations
OMIM: gene MIM:607708 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| complex neurodevelopmental disorder | Moderate | Autosomal dominant |
| CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy | Moderate | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy | Strong | AD |
Mondo (3): neurodevelopmental disorder (MONDO:0700092), CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy (MONDO:1040008), complex neurodevelopmental disorder (MONDO:0100038)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
27 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001764_3 | White matter integrity (bipolar disorder risk interaction) | 4.000000e-06 |
| GCST002299_2 | Chronic lymphocytic leukemia | 3.000000e-09 |
| GCST002577_1 | Non-small cell lung cancer (survival) | 3.000000e-07 |
| GCST004146_33 | Chronic lymphocytic leukemia | 6.000000e-10 |
| GCST004826_6 | P wave duration | 4.000000e-08 |
| GCST004902_21 | Parkinson’s disease | 5.000000e-11 |
| GCST006061_91 | Atrial fibrillation | 9.000000e-09 |
| GCST006061_92 | Atrial fibrillation | 2.000000e-09 |
| GCST006414_87 | Atrial fibrillation | 2.000000e-13 |
| GCST007045_26 | PR interval | 3.000000e-09 |
| GCST007576_173 | Chronotype | 4.000000e-09 |
| GCST008156_31 | Hip circumference adjusted for BMI | 5.000000e-07 |
| GCST009017_5 | T wave morphology restitution during recovery from exercise (MTAG) | 2.000000e-07 |
| GCST009069_5 | T wave morphology restitution during recovery from exercise | 3.000000e-08 |
| GCST009325_82 | Parkinson’s disease or first degree relation to individual with Parkinson’s disease | 1.000000e-12 |
| GCST010154_1 | Small vessel stroke (CCS and TOAST classification) | 1.000000e-08 |
| GCST010321_134 | PR interval | 2.000000e-25 |
| GCST010346_37 | TPE interval (resting) | 3.000000e-10 |
| GCST010796_1787 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-18 |
| GCST010796_1788 | Electrocardiogram morphology (amplitude at temporal datapoints) | 8.000000e-21 |
| GCST010796_1789 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-12 |
| GCST010796_1790 | Electrocardiogram morphology (amplitude at temporal datapoints) | 7.000000e-09 |
| GCST010796_1791 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-09 |
| GCST010796_1792 | Electrocardiogram morphology (amplitude at temporal datapoints) | 2.000000e-09 |
| GCST010796_1793 | Electrocardiogram morphology (amplitude at temporal datapoints) | 1.000000e-24 |
| GCST011010_19 | Electrocardiographic traits (multivariate) | 6.000000e-09 |
| GCST012490_522 | Femur bone mineral density x serum urate levels interaction | 8.000000e-09 |
EFO canonical traits (11, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004641 | white matter integrity |
| EFO:0000714 | survival time |
| EFO:0005094 | P wave duration |
| EFO:0004462 | PR interval |
| EFO:0008328 | chronotype measurement |
| EFO:0008039 | BMI-adjusted hip circumference |
| EFO:0008398 | T wave morphology measurement |
| EFO:1001504 | small vessel stroke |
| EFO:0004644 | TPE interval measurement |
| EFO:0004327 | electrocardiography |
| EFO:0004531 | urate measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL2097164 (PROTEIN FAMILY), CHEMBL2801 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
40 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 428,016 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1078178 | MOMELOTINIB | 4 | 3,481 |
| CHEMBL1287853 | FEDRATINIB | 4 | 3,554 |
| CHEMBL1789941 | RUXOLITINIB | 4 | 11,547 |
| CHEMBL189963 | PALBOCICLIB | 4 | 13,102 |
| CHEMBL2103743 | TOFACITINIB CITRATE | 4 | 1,672 |
| CHEMBL2105759 | BARICITINIB | 4 | 6,741 |
| CHEMBL221959 | TOFACITINIB | 4 | 10,408 |
| CHEMBL3301610 | ABEMACICLIB | 4 | 7,045 |
| CHEMBL3301622 | GILTERITINIB | 4 | 2,395 |
| CHEMBL3545110 | RIBOCICLIB | 4 | 8,018 |
| CHEMBL3545311 | BRIGATINIB | 4 | 5,634 |
| CHEMBL535 | SUNITINIB | 4 | 79,020 |
| CHEMBL553 | ERLOTINIB | 4 | 108,300 |
| CHEMBL608533 | MIDOSTAURIN | 4 | 7,259 |
| CHEMBL939 | GEFITINIB | 4 | 117,814 |
| CHEMBL300138 | ENZASTAURIN | 3 | 3,209 |
| CHEMBL2105728 | CRENOLANIB | 3 | 2,167 |
| CHEMBL223360 | LINIFANIB | 3 | 3,925 |
| CHEMBL428690 | ALVOCIDIB | 3 | 27,781 |
| CHEMBL522892 | DOVITINIB | 3 | 4,944 |
| CHEMBL603469 | LESTAURTINIB | 3 | |
| CHEMBL91829 | RUBOXISTAURIN | 3 | |
| CHEMBL1721885 | SU-014813 | 2 | |
| CHEMBL1967878 | CENISERTIB | 2 | |
| CHEMBL1980297 | ILORASERTIB | 2 | |
| CHEMBL3039513 | DECERNOTINIB | 2 | |
| CHEMBL3545396 | BMS-690514 | 2 | |
| CHEMBL362558 | LY-2090314 | 2 | |
| CHEMBL384304 | RG-547 | 2 | |
| CHEMBL475251 | R-406 | 2 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — CAMK2 family
Most potent curated ligand interactions (3 total), top 3:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| compound 15b [PMID: 18334293] | Inhibition | 8.05 | pIC50 |
| compound 27 [PMID: 18337095] | Inhibition | 8.0 | pIC50 |
| MELK-TI | Inhibition | 6.09 | pIC50 |
Binding affinities (BindingDB)
382 measured of 382 human assays (382 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 2-amino-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.04 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| [(2R)-2-(aminomethyl)piperidin-1-yl]-[2-chloro-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)-4-pyridinyl]methanone | IC50 | 0.05 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(methylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.05 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-[(3R)-3-aminopyrrolidin-1-yl]-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.05 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(1H-pyrazol-4-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.05 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(1H-pyrazol-4-ylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.06 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[(2S)-2-(hydroxymethyl)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.06 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[(3R)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.06 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[2-(dimethylamino)ethylamino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.07 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-(3-carbamoylazetidin-1-yl)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.07 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxy-3-methylazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.07 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-sulfamoylethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.07 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[(3S)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.07 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-[(3S)-3-aminopyrrolidin-1-yl]-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.07 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-methoxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.08 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(1-methylpyrazol-4-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.08 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.09 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[3-(methanesulfonamido)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.09 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-(3-cyanoazetidin-1-yl)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[3-(methylamino)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[3-(dimethylamino)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[3-(hydroxymethyl)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxy-3-methylazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-hydroxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(1H-pyrazol-5-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[2-(dimethylamino)ethoxy]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-hydroxy-2-methylpropoxy)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.1 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(ethylcarbamoylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.11 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[[(2S)-2-hydroxypropyl]amino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.11 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxypropylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.11 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-fluoroazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.13 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxyazetidin-1-yl)-6-(5-thiophen-3-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.13 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[(3-hydroxy-3-methylbutyl)amino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.13 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(1H-imidazol-2-ylmethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.13 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[1-(oxetan-3-yl)pyrazol-4-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.13 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-methoxy-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-methylsulfonylazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[[(2R)-2-hydroxypropyl]amino]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-morpholin-4-ylethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[(3S,4S)-3,4-dihydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[(2R)-2-(hydroxymethyl)pyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-oxopiperazin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.14 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-(3-acetamidoazetidin-1-yl)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.15 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-[1-(2-cyanoethyl)pyrazol-4-yl]-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.15 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[5-(5-fluorothiophen-2-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-6-[(2S)-2-(methylcarbamoyl)azetidin-1-yl]pyridine-4-carboxamide | IC50 | 0.15 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-(1,1-dioxo-1,2-thiazolidin-2-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.16 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| N-[(2S)-2-(diethylamino)propyl]-2-[3-(ethylsulfonylamino)azetidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.16 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
| 2-(cyclopropanecarbonylamino)-N-[(2S)-2-(diethylamino)propyl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | IC50 | 0.16 nM | US-10100058: Fused heterocyclic compounds as CaM kinase inhibitors |
ChEMBL bioactivities
511 potent at pChembl≥5 of 525 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.51 | IC50 | 0.0311 | nM | STAUROSPORINE |
| 10.43 | IC50 | 0.0372 | nM | STAUROSPORINE |
| 10.30 | IC50 | 0.05 | nM | CHEMBL4218769 |
| 10.22 | IC50 | 0.06 | nM | CHEMBL4208018 |
| 10.19 | IC50 | 0.0645 | nM | STAUROSPORINE |
| 10.15 | IC50 | 0.07 | nM | CHEMBL4215817 |
| 10.10 | IC50 | 0.08 | nM | CHEMBL4218245 |
| 10.05 | IC50 | 0.09 | nM | CHEMBL4217261 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4206514 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4215300 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL4210359 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL4209816 |
| 9.64 | IC50 | 0.23 | nM | CHEMBL4213838 |
| 9.55 | IC50 | 0.28 | nM | CHEMBL4210881 |
| 9.52 | IC50 | 0.3 | nM | CHEMBL4205997 |
| 9.49 | Kd | 0.32 | nM | STAUROSPORINE |
| 9.30 | Kd | 0.5 | nM | STAUROSPORINE |
| 9.04 | IC50 | 0.92 | nM | CHEMBL4209443 |
| 8.80 | IC50 | 1.6 | nM | CHEMBL4205708 |
| 8.70 | IC50 | 2 | nM | CHEMBL3699625 |
| 8.70 | IC50 | 2 | nM | CHEMBL3216550 |
| 8.70 | IC50 | 2 | nM | STAUROSPORINE |
| 8.66 | IC50 | 2.17 | nM | CHEMBL4211430 |
| 8.59 | IC50 | 2.6 | nM | ABEMACICLIB |
| 8.48 | IC50 | 3.3 | nM | CHEMBL4213305 |
| 8.47 | IC50 | 3.4 | nM | CHEMBL4209840 |
| 8.46 | IC50 | 3.5 | nM | CHEMBL4210568 |
| 8.40 | IC50 | 4 | nM | CHEMBL4208717 |
| 8.40 | Kd | 4 | nM | CHEMBL4465866 |
| 8.40 | IC50 | 4 | nM | STAUROSPORINE |
| 8.40 | Ki | 3.981 | nM | TAE-684 |
| 8.30 | Ki | 5.012 | nM | CHEMBL1998159 |
| 8.24 | IC50 | 5.8 | nM | CHEMBL4216080 |
| 8.22 | Kd | 6 | nM | CHEMBL4576489 |
| 8.22 | IC50 | 6 | nM | STAUROSPORINE |
| 8.14 | IC50 | 7.2 | nM | CHEMBL4213540 |
| 8.11 | Kd | 7.861 | nM | CHEMBL5653589 |
| 8.10 | IC50 | 8 | nM | CHEMBL3699629 |
| 8.06 | Kd | 8.8 | nM | LESTAURTINIB |
| 8.05 | IC50 | 9 | nM | CHEMBL270849 |
| 8.04 | IC50 | 9.1 | nM | CHEMBL4214345 |
| 8.00 | IC50 | 10 | nM | CHEMBL255607 |
| 8.00 | Ki | 10 | nM | CHEMBL2002726 |
| 7.92 | IC50 | 12 | nM | CHEMBL272978 |
| 7.90 | Ki | 12.59 | nM | CHEMBL1991063 |
| 7.89 | IC50 | 13 | nM | CHEMBL402340 |
| 7.80 | Ki | 15.85 | nM | CHEMBL1970903 |
| 7.80 | Ki | 15.85 | nM | CHEMBL2001751 |
| 7.77 | IC50 | 17 | nM | CHEMBL3699624 |
| 7.72 | Kd | 19 | nM | ABEMACICLIB |
PubChem BioAssay actives
244 with measured affinity, of 2120 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (2S,3R,4R,6R)-3-methoxy-2-methyl-4-(methylamino)-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-16-one | 1531610: Inhibition of human CAMK2D using KKLNRTLSFAEPG as substrate by [gamma-33P]-ATP assay | ic50 | <0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-hydroxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-methoxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-[(3S)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-methoxyethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(methylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-[(3R)-3-hydroxypyrrolidin-1-yl]-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxyazetidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0001 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(4-hydroxypiperidin-1-yl)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0002 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(dimethylamino)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0002 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-morpholin-4-yl-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0003 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-(2-methoxyethoxy)-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0003 | uM |
| N-[(2S)-2-(diethylamino)propyl]-2-ethyl-6-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0009 | uM |
| N-[2-(diethylamino)ethyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0016 | uM |
| 6-chloro-2-N-(3,4-dichlorophenyl)-4-N-[2-(1-methylpyrrolidin-2-yl)ethyl]quinazoline-2,4-diamine;pentahydrochloride | 641584: Inhibition of human recombinant CAMK2delta using tetramethylbenzidine as substrate by spectrophotometry analysis | ic50 | 0.0020 | uM |
| N-[(2S)-1-(diethylamino)propan-2-yl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0022 | uM |
| Abemaciclib | 2199002: Inhibition of human CAMK2delta preincubated with compound for 20 mins followed by [33P]ATP addition and measured after 2 hrs by filter binding method | ic50 | 0.0026 | uM |
| N-[2-(diethylamino)ethyl]-8-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)imidazo[1,2-a]pyridine-6-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0033 | uM |
| N-[[(2S)-1-ethylpyrrolidin-2-yl]methyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0034 | uM |
| N-[2-(diethylamino)ethyl]-3-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)benzamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0035 | uM |
| N-[2-(diethylamino)ethyl]-3-methyl-7-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)benzimidazole-5-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0040 | uM |
| 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]amino]ethoxy]ethoxy]ethoxy]ethyl]propanamide | 1526180: Binding affinity to recombinant human full-length N-terminal GST-tagged CAMK2D expressed in baculovirus expression system using GS peptide as substrate incubated for 1 hr by TR-FRET assay | kd | 0.0040 | uM |
| N-[2-(diethylamino)ethyl]-3-(6-thiophen-2-ylimidazo[1,2-b]pyridazin-3-yl)benzamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0058 | uM |
| 3-(2,2-difluoro-10,12-dimethyl-1-aza-3-azonia-2-boranuidatricyclo[7.3.0.03,7]dodeca-3,5,7,9,11-pentaen-4-yl)-N-[2-[2-[2-[2-[[(2S,3R,4R,6R)-3-methoxy-2-methyl-16-oxo-29-oxa-1,7,17-triazaoctacyclo[12.12.2.12,6.07,28.08,13.015,19.020,27.021,26]nonacosa-8,10,12,14,19,21,23,25,27-nonaen-4-yl]-methylamino]ethoxy]ethoxy]ethoxy]ethyl]propanamide | 1526180: Binding affinity to recombinant human full-length N-terminal GST-tagged CAMK2D expressed in baculovirus expression system using GS peptide as substrate incubated for 1 hr by TR-FRET assay | kd | 0.0060 | uM |
| N-[(2R)-2-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0072 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147984: Binding affinity to human CAMK2D incubated for 45 mins by Kinobead based pull down assay | kd | 0.0079 | uM |
| (15S,16S,18R)-16-hydroxy-16-(hydroxymethyl)-15-methyl-28-oxa-4,14,19-triazaoctacyclo[12.11.2.115,18.02,6.07,27.08,13.019,26.020,25]octacosa-1,6,8,10,12,20,22,24,26-nonaen-3-one | 507857: Binding affinity to CAMK2D | kd | 0.0088 | uM |
| N-(3-chlorophenyl)-4-(3-piperazin-1-ylphenyl)pyrimidin-2-amine | 322069: Inhibition of cloned CaMK2delta | ic50 | 0.0090 | uM |
| N-[3-(diethylamino)propyl]-2-(5-thiophen-2-ylpyrazolo[1,5-a]pyrimidin-3-yl)pyridine-4-carboxamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0091 | uM |
| 3-[3-(2-aminoethyl)indol-1-yl]-4-(5-chloro-1H-indol-3-yl)pyrrole-2,5-dione | 322228: Inhibition of CaMK2delta | ic50 | 0.0100 | uM |
| N’-[3-[2-(3-chloroanilino)pyrimidin-4-yl]phenyl]ethane-1,2-diamine | 322069: Inhibition of cloned CaMK2delta | ic50 | 0.0120 | uM |
| 3-(5-chloro-1H-indol-3-yl)-4-[3-[2-(methylamino)ethyl]indol-1-yl]pyrrole-2,5-dione | 322228: Inhibition of CaMK2delta | ic50 | 0.0130 | uM |
| methyl 3-[4-[3-[2-(methylamino)ethyl]indol-1-yl]-2,5-dioxopyrrol-3-yl]-1H-indole-5-carboxylate | 322228: Inhibition of CaMK2delta | ic50 | 0.0210 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147984: Binding affinity to human CAMK2D incubated for 45 mins by Kinobead based pull down assay | kd | 0.0224 | uM |
| 3,13,23-triazahexacyclo[14.7.0.02,10.04,9.011,15.017,22]tricosa-1,4,6,8,10,15,17,19,21-nonaene-12,14-dione | 45962: Inhibition of Calcium/calmodulin-dependent protein kinase type II | ic50 | 0.0250 | uM |
| 1-[2-(18-methyl-12,14-dioxo-3,13,18-triazahexacyclo[14.7.0.02,10.04,9.011,15.017,21]tricosa-1(16),2(10),4,6,8,11(15),17(21),19,22-nonaen-5-yl)ethyl]piperidine-4-carboxamide | 45968: Inhibitory activity against Calcium/calmodulin-dependent protein kinase type II | ic50 | 0.0250 | uM |
| Brigatinib | 2182812: Inhibition of human CAMK2D using KKLNRTLSFAEPG as substrate in presence of [gamma33P]-ATP by HotSpot assay | ic50 | 0.0290 | uM |
| 3-[3-(2-aminoethyl)indol-1-yl]-4-[5-(trifluoromethyl)-1H-indol-3-yl]pyrrole-2,5-dione | 322228: Inhibition of CaMK2delta | ic50 | 0.0320 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-6-[(2-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]-6-[(2-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]propanoyl]amino]-4-methylpentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-oxopentanoyl]amino]-4-carboxybutanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]-3-carboxypropanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 220482: Inhibitory activity of compound against CaMKII | ic50 | 0.0320 | uM |
| 3-[1-(3-aminopropyl)indol-3-yl]-4-(5-bromo-1H-indol-3-yl)pyrrole-2,5-dione | 322072: Inhibition of CaMK2delta | ic50 | 0.0340 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-6-amino-2-[(2-nitrophenyl)methoxycarbonylamino]hexanoyl]amino]hexanoyl]amino]propanoyl]amino]-4-methylpentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-oxopentanoyl]amino]-4-carboxybutanoyl]amino]-3-methylbutanoyl]amino]-3-carboxypropanoyl]amino]propanoyl]amino]-4-methylpentanoic acid | 220482: Inhibitory activity of compound against CaMKII | ic50 | 0.0360 | uM |
| Midostaurin | 435647: Binding constant for CAMK2D kinase domain | kd | 0.0360 | uM |
| N-[2-(dimethylamino)ethyl]-3-(6-thiophen-2-ylimidazo[1,2-b]pyridazin-3-yl)benzamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0370 | uM |
| 3-[3-(2-aminoethyl)indol-1-yl]-4-(5-fluoro-1H-indol-3-yl)pyrrole-2,5-dione | 322228: Inhibition of CaMK2delta | ic50 | 0.0380 | uM |
| 3-[1-(3-aminopropyl)indol-3-yl]-4-(1-benzothiophen-3-yl)pyrrole-2,5-dione | 322227: Inhibition of CaMK2delta using 3 weeks old stock solution of compound | ic50 | 0.0390 | uM |
| N-[2-[di(propan-2-yl)amino]ethyl]-3-(6-thiophen-2-ylimidazo[1,2-b]pyridazin-3-yl)benzamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0410 | uM |
| 4-[2-(3-chloroanilino)pyrimidin-4-yl]benzoic acid | 322069: Inhibition of cloned CaMK2delta | ic50 | 0.0420 | uM |
| N-[2-(diethylamino)ethyl]-3-(6-phenylimidazo[1,2-b]pyridazin-3-yl)benzamide | 1370175: Inhibition of recombinant human full length His-tagged CaMK2delta expressed in baculovirus using Biotin labelled STK1 as substrate after 1 hr in presence of ATP by fluorescence assay | ic50 | 0.0440 | uM |
| 3-[4-[3-(2-aminoethyl)indol-1-yl]-2,5-dioxopyrrol-3-yl]-1H-indole-5-carbonitrile | 322228: Inhibition of CaMK2delta | ic50 | 0.0460 | uM |
CTD chemical–gene interactions
75 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| methylmercuric chloride | increases expression, affects cotreatment | 4 |
| Benzo(a)pyrene | decreases expression | 4 |
| bisphenol A | decreases expression, affects cotreatment, increases methylation | 3 |
| mercuric bromide | increases expression, affects cotreatment | 2 |
| Estradiol | affects cotreatment, increases expression, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Tretinoin | increases expression | 2 |
| p-Chloromercuribenzoic Acid | affects cotreatment, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| GSK-J4 | increases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| bisphenol F | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| uranyl acetate | affects expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects cotreatment, affects localization, decreases expression, increases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, decreases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| epigallocatechin gallate | decreases expression, affects cotreatment | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| torcetrapib | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| 2-amino-14,16-dimethyloctadecan-3-ol | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| eprenetapopt | affects expression | 1 |
| bisphenol S | increases expression | 1 |
ChEMBL screening assays
338 unique, capped per target: 337 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2422678 | Binding | Inhibition of CaMK2alpha/CaMK2beta/CaMK2delta/CaMK2gamma in human PC3 cell lysates at 10 uM using desthiobiotin-tagged ATP probe AX9989 followed by trypsinization by LC/MS analysis | Hit-to-lead optimization and kinase selectivity of imidazo[1,2-a]quinoxalin-4-amine derived JNK1 inhibitors. — Bioorg Med Chem Lett |
| CHEMBL1963738 | Functional | PUBCHEM_BIOASSAY: Navigating the Kinome. (Class of assay: other) Panel member name: CAMK2D | PubChem BioAssay data set |
Cellosaurus cell lines
6 cell lines: 4 cancer cell line, 2 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2TD | Abcam HEK293T CAMK2D KO | Transformed cell line | Female |
| CVCL_D7LK | Ubigene A-549 CAMK2D KO | Cancer cell line | Male |
| CVCL_D8IB | Ubigene HCT 116 CAMK2D KO | Cancer cell line | Male |
| CVCL_D9AV | Ubigene HEK293 CAMK2D KO | Transformed cell line | Female |
| CVCL_D9Z8 | Ubigene HeLa CAMK2D KO | Cancer cell line | Female |
| CVCL_SG66 | HAP1 CAMK2D (-) | Cancer cell line | Male |
Clinical trials (associated diseases)
204 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT06310681 | Not specified | COMPLETED | Pilot Testing of a Co-adapted Group Programme for Parents/Carers of Children With Complex Neurodisability |
| NCT07303049 | Not specified | NOT_YET_RECRUITING | Cognitive Benefit of Intensive Rehabilitation Using Rhythmic Music Training in Children With Complex Neurodevelopmental Disorder |
| NCT01783041 | PHASE2/PHASE3 | COMPLETED | Effect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants |
| NCT05767385 | PHASE2/PHASE3 | RECRUITING | Fetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior |
| NCT05675098 | EARLY_PHASE1 | NOT_YET_RECRUITING | Central Nervous System Stimulants and Physical Function in Children With Cerebral Palsy |
| NCT00783783 | Not specified | COMPLETED | CYP2D6 Pharmacogenetics in Risperidone-Treated Children |
| NCT01778504 | Not specified | RECRUITING | Studying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders |
| NCT01850784 | Not specified | UNKNOWN | High Energy Formula Feeding in Infants With Congenital Heart Disease |
| NCT01922791 | Not specified | COMPLETED | Nutrition and Pregnancy Intervention Study |
| NCT01942525 | Not specified | UNKNOWN | Influence of Intrauterine Growth Restriction on Amplitude-integrated EEG in Preterm Infants |
| NCT02003170 | Not specified | COMPLETED | Etiology and Early Diagnosis of Neurodevelopmental Disorders |
| NCT02118649 | Not specified | ACTIVE_NOT_RECRUITING | Enhancing Behavior and Brain Response to Visual Targets Using a Computer Game |
| NCT02557191 | Not specified | TERMINATED | Biomarkers, Neurodevelopment and Preterm Infants |
| NCT02690675 | Not specified | COMPLETED | Iron Supplement Effect on Child Development |
| NCT02694003 | Not specified | COMPLETED | Better Nights, Better Days for Children With Neurodevelopment Disorders |
| NCT02792894 | Not specified | COMPLETED | Family Networks (FaNs) for Children With Developmental Disorders and Delays |
| NCT02871674 | Not specified | UNKNOWN | Good Night Project: Behavioural Sleep Interventions for Children With ADHD: A Randomised Controlled Trial |
| NCT02887157 | Not specified | COMPLETED | Analyzing Retinal Microanatomy in ROP |
| NCT02898298 | Not specified | COMPLETED | Positive Emotion Regulation Training in Children, Adolescents and Young Adults With and Without Developmental Disorder |
| NCT02912780 | Not specified | UNKNOWN | Introduction of Microsystems in a Level 3 Neonatal Intensive Care Unit |
| NCT03023293 | Not specified | COMPLETED | n-3 PUFAs, Irisin and Maternal Glucose Metabolism From Pregnancy to Postpartum |
| NCT03023644 | Not specified | COMPLETED | Improving Neurodevelopmental Outcomes in Children With Congenital Heart Disease: An Intervention Study |
| NCT03032991 | Not specified | UNKNOWN | Early Biomarkers of Neurodevelopment in Offspring of Diabetic Mothers |
| NCT03088189 | Not specified | TERMINATED | Effect of Parental Peri-conceptional Vitamin B12 Supplementation on Infant Neurocognitive Development in Offspring |
| NCT03096028 | Not specified | COMPLETED | Developmental Origins of Mental Health Disorders |
| NCT03148782 | Not specified | COMPLETED | Brain Plasticity Underlying Acquisition of New Organizational Skills in Children-R61 Phase |
| NCT03172104 | Not specified | COMPLETED | Neurobehavioural Development of Infants Born <30 Weeks Gestational Age Between Birth and Five Years of Age |
| NCT03222375 | Not specified | RECRUITING | SQUED™ Series 28.1 Home-use and Treatment of Autowave Reverberator of Autism |
Related Atlas pages
- Associated diseases: complex neurodevelopmental disorder, CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): atrial fibrillation, B-cell chronic lymphocytic leukemia, CAMK2D-related neurodevelopmental disorder and dilated cardiomyopathy, complex neurodevelopmental disorder, non-small cell lung carcinoma, Parkinson disease