CAMSAP1-DT

Summary

CAMSAP1-DT (CAMSAP1 divergent transcript, HGNC:55648) is a long non-coding RNA gene on chromosome 9q34.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55648
Approved symbol	CAMSAP1-DT
Name	CAMSAP1 divergent transcript
Location	9q34.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238058
Ensembl biotype	lncRNA
Entrez	107987141
RNAcentral	URS0002A40533 — lncRNA, 1446 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000423793, ENST00000651515, ENST00000803315, ENST00000803316, ENST00000803317, ENST00000803318, ENST00000803319

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000423793 — 3 exons

Exon	Start	End
ENSE00001806497	135908652	135908788
ENSE00004193641	135907802	135907875
ENSE00004193646	135913404	135913652

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 86.73.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	86.73	gold quality
right testis	UBERON:0004534	86.63	gold quality
testis	UBERON:0000473	85.83	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	85.26	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.34	gold quality
pituitary gland	UBERON:0000007	81.80	gold quality
adenohypophysis	UBERON:0002196	81.42	gold quality
right uterine tube	UBERON:0001302	80.11	gold quality
cortical plate	UBERON:0005343	79.42	gold quality
apex of heart	UBERON:0002098	78.14	gold quality
sural nerve	UBERON:0015488	77.77	gold quality
nucleus accumbens	UBERON:0001882	77.20	gold quality
left ovary	UBERON:0002119	76.28	gold quality
anterior cingulate cortex	UBERON:0009835	76.10	gold quality
ovary	UBERON:0000992	75.93	gold quality
right ovary	UBERON:0002118	75.86	gold quality
hypothalamus	UBERON:0001898	75.69	gold quality
caudate nucleus	UBERON:0001873	75.61	gold quality
brain	UBERON:0000955	75.19	gold quality
putamen	UBERON:0001874	75.12	gold quality
right frontal lobe	UBERON:0002810	75.06	gold quality
temporal lobe	UBERON:0001871	74.87	gold quality
Ammon’s horn	UBERON:0001954	74.78	gold quality
amygdala	UBERON:0001876	74.76	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.51	gold quality
cerebral cortex	UBERON:0000956	74.40	gold quality
ganglionic eminence	UBERON:0004023	74.40	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	74.22	gold quality
endometrium	UBERON:0001295	74.04	gold quality
superior frontal gyrus	UBERON:0002661	73.97	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.99

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.