CAMTA1-AS2

Summary

CAMTA1-AS2 (CAMTA1 antisense RNA 2, HGNC:40855) is a long non-coding RNA gene on chromosome 1p36.23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40855
Approved symbol	CAMTA1-AS2
Name	CAMTA1 antisense RNA 2
Location	1p36.23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237728
Ensembl biotype	lncRNA
Entrez	102725193
RNAcentral	URS000077C601 — lncRNA, 433 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000411708, ENST00000618051, ENST00000751307, ENST00000751308

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411708 — 3 exons

Exon	Start	End
ENSE00003737971	7389340	7389439
ENSE00004096415	7389659	7389911
ENSE00004096422	7388178	7388493

Expression profiles

Bgee: expression breadth broad, 83 present calls, max score 90.26.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0252 / max 26.6140, expressed in 5 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
10072	0.0252	5

Top tissues by expression

83 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.26	gold quality
left testis	UBERON:0004533	83.00	gold quality
right testis	UBERON:0004534	82.80	gold quality
testis	UBERON:0000473	82.27	gold quality
liver	UBERON:0002107	67.97	silver quality
corpus callosum	UBERON:0002336	63.35	gold quality
skeletal muscle tissue	UBERON:0001134	61.75	gold quality
cortex of kidney	UBERON:0001225	59.09	gold quality
calcaneal tendon	UBERON:0003701	58.80	gold quality
monocyte	CL:0000576	58.10	gold quality
sural nerve	UBERON:0015488	57.40	silver quality
smooth muscle tissue	UBERON:0001135	56.70	gold quality
multicellular organism	UBERON:0000468	56.26	gold quality
prefrontal cortex	UBERON:0000451	56.21	gold quality
islet of Langerhans	UBERON:0000006	55.52	gold quality
right adrenal gland cortex	UBERON:0035827	53.14	gold quality
gastrocnemius	UBERON:0001388	51.91	gold quality
adult mammalian kidney	UBERON:0000082	51.28	gold quality
right uterine tube	UBERON:0001302	50.85	gold quality
myometrium	UBERON:0001296	50.43	silver quality
primary visual cortex	UBERON:0002436	50.29	gold quality
superior frontal gyrus	UBERON:0002661	49.92	gold quality
fallopian tube	UBERON:0003889	49.15	gold quality
blood	UBERON:0000178	48.97	gold quality
lung	UBERON:0002048	48.47	gold quality
heart left ventricle	UBERON:0002084	48.22	gold quality
tibial artery	UBERON:0007610	48.08	gold quality
left coronary artery	UBERON:0001626	47.25	gold quality
heart	UBERON:0000948	47.01	gold quality
cerebellum	UBERON:0002037	46.70	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.