CATIP-AS2

Summary

CATIP-AS2 (CATIP antisense RNA 2, HGNC:41079) is a long non-coding RNA gene on chromosome 2q35.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41079
Approved symbol	CATIP-AS2
Name	CATIP antisense RNA 2
Location	2q35
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000237281
Ensembl biotype	lncRNA
Entrez	103689911
RNAcentral	URS00007E3352 — lncRNA, 1183 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000411433, ENST00000833955, ENST00000833956, ENST00000833957, ENST00000833958

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000411433 — 4 exons

Exon	Start	End
ENSE00001748604	218327804	218327959
ENSE00001779059	218351160	218351226
ENSE00004251055	218326247	218327147
ENSE00004251070	218357914	218357992

Expression profiles

Bgee: expression breadth ubiquitous, 108 present calls, max score 80.22.

Top tissues by expression

108 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.22	silver quality
bone marrow cell	CL:0002092	68.37	silver quality
tonsil	UBERON:0002372	65.69	gold quality
lymph node	UBERON:0000029	64.56	gold quality
placenta	UBERON:0001987	61.81	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	60.95	gold quality
adult mammalian kidney	UBERON:0000082	60.91	gold quality
monocyte	CL:0000576	60.85	gold quality
bone marrow	UBERON:0002371	60.70	gold quality
leukocyte	CL:0000738	60.53	gold quality
islet of Langerhans	UBERON:0000006	59.83	gold quality
myometrium	UBERON:0001296	59.81	gold quality
kidney	UBERON:0002113	58.95	gold quality
skeletal muscle tissue	UBERON:0001134	57.65	gold quality
vermiform appendix	UBERON:0001154	55.92	gold quality
blood	UBERON:0000178	55.56	gold quality
cortex of kidney	UBERON:0001225	54.97	gold quality
stromal cell of endometrium	CL:0002255	54.65	silver quality
liver	UBERON:0002107	54.41	gold quality
gall bladder	UBERON:0002110	52.87	gold quality
superior frontal gyrus	UBERON:0002661	52.08	gold quality
thyroid gland	UBERON:0002046	51.67	gold quality
right lobe of liver	UBERON:0001114	51.59	gold quality
left lobe of thyroid gland	UBERON:0001120	51.29	gold quality
muscle of leg	UBERON:0001383	50.82	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.76	gold quality
right lobe of thyroid gland	UBERON:0001119	50.66	gold quality
pancreas	UBERON:0001264	50.27	gold quality
metanephros cortex	UBERON:0010533	49.96	gold quality
prefrontal cortex	UBERON:0000451	49.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.59

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.