CBARP-DT

Summary

CBARP-DT (CBARP divergent transcript, HGNC:55285) is a long non-coding RNA gene on chromosome 19p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55285
Approved symbol	CBARP-DT
Name	CBARP divergent transcript
Location	19p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267778
Ensembl biotype	lncRNA
Entrez	118827813
RNAcentral	URS00026A1EC4 — lncRNA, 456 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000592843, ENST00000816461, ENST00000816462, ENST00000816463

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000592843 — 3 exons

Exon	Start	End
ENSE00002758932	1239364	1239522
ENSE00002816585	1238179	1238226
ENSE00002836233	1238404	1239040

Expression profiles

Bgee: expression breadth ubiquitous, 103 present calls, max score 94.92.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skeletal muscle tissue	UBERON:0001134	94.92	silver quality
thymus	UBERON:0002370	92.06	silver quality
right testis	UBERON:0004534	69.50	gold quality
left testis	UBERON:0004533	68.77	gold quality
nucleus accumbens	UBERON:0001882	68.01	gold quality
testis	UBERON:0000473	67.45	gold quality
putamen	UBERON:0001874	67.16	gold quality
right frontal lobe	UBERON:0002810	66.92	gold quality
superior frontal gyrus	UBERON:0002661	65.73	gold quality
caudate nucleus	UBERON:0001873	65.62	gold quality
anterior cingulate cortex	UBERON:0009835	65.33	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	65.12	gold quality
primary visual cortex	UBERON:0002436	65.07	gold quality
Brodmann (1909) area 9	UBERON:0013540	64.81	gold quality
frontal cortex	UBERON:0001870	64.80	gold quality
cerebral cortex	UBERON:0000956	64.76	gold quality
right hemisphere of cerebellum	UBERON:0014890	64.32	gold quality
quadriceps femoris	UBERON:0001377	64.14	gold quality
brain	UBERON:0000955	63.86	gold quality
Ammon’s horn	UBERON:0001954	63.79	gold quality
ventricular zone	UBERON:0003053	63.68	gold quality
prefrontal cortex	UBERON:0000451	63.35	gold quality
cerebellar hemisphere	UBERON:0002245	63.32	gold quality
cerebellum	UBERON:0002037	63.29	gold quality
cerebellar cortex	UBERON:0002129	63.27	gold quality
cerebellar vermis	UBERON:0004720	63.05	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	63.03	gold quality
temporal lobe	UBERON:0001871	62.62	gold quality
amygdala	UBERON:0001876	62.61	gold quality
cortical plate	UBERON:0005343	62.19	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.