CBLC
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Also known as CBL-3CBL-SLRNF57
Summary
CBLC (Cbl proto-oncogene C, HGNC:15961) is a protein-coding gene on chromosome 19q13.32, encoding E3 ubiquitin-protein ligase CBL-C (Q9ULV8). Acts as an E3 ubiquitin-protein ligase, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and then transfers it to substrates promoting their degradation by the proteasome. In precision oncology, CBLC EXPRESSION is associated with resistance to Olaparib in Cancer (CIViC Level D).
This gene encodes a member of the Cbl family of E3 ubiquitin ligases. Cbl proteins play important roles in cell signaling through the ubiquitination and subsequent downregulation of tyrosine kinases. Expression of this gene may be restricted to epithelial cells, and alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene.
Source: NCBI Gene 23624 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 94 total
- Druggable target: yes
- Precision-oncology evidence (CIViC): 1 curated variant–drug association
- MANE Select transcript:
NM_012116
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:15961 |
| Approved symbol | CBLC |
| Name | Cbl proto-oncogene C |
| Location | 19q13.32 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CBL-3, CBL-SL, RNF57 |
| Ensembl gene | ENSG00000142273 |
| Ensembl biotype | protein_coding |
| OMIM | 608453 |
| Entrez | 23624 |
Gene structure
Transcript identifiers
Ensembl transcripts: 15 — 14 protein_coding, 1 nonsense_mediated_decay
ENST00000341505, ENST00000647063, ENST00000647358, ENST00000880087, ENST00000880088, ENST00000880089, ENST00000880090, ENST00000880091, ENST00000880092, ENST00000880093, ENST00000880094, ENST00000880095, ENST00000880096, ENST00000880097, ENST00000916799
RefSeq mRNA: 2 — MANE Select: NM_012116
NM_001130852, NM_012116
CCDS: CCDS12643, CCDS46109
Canonical transcript exons
ENST00000647358 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000953175 | 44780905 | 44781051 |
| ENSE00000953176 | 44781207 | 44781363 |
| ENSE00000953177 | 44782370 | 44782491 |
| ENSE00000953178 | 44784264 | 44784401 |
| ENSE00000953179 | 44790004 | 44790091 |
| ENSE00000953180 | 44792383 | 44792514 |
| ENSE00000953181 | 44793474 | 44793620 |
| ENSE00000953182 | 44794204 | 44794281 |
| ENSE00000953183 | 44800381 | 44800450 |
| ENSE00003821766 | 44777890 | 44778284 |
| ENSE00003833186 | 44800551 | 44800652 |
Expression profiles
Bgee: expression breadth ubiquitous, 135 present calls, max score 95.31.
FANTOM5 (CAGE): breadth broad, TPM avg 5.3077 / max 195.6755, expressed in 365 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 176296 | 4.9258 | 358 |
| 176298 | 0.2779 | 133 |
| 176297 | 0.1040 | 68 |
Top tissues by expression
271 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of transverse colon | UBERON:0004991 | 95.31 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 94.11 | gold quality |
| skin of abdomen | UBERON:0001416 | 91.01 | gold quality |
| skin of leg | UBERON:0001511 | 90.41 | gold quality |
| esophagus mucosa | UBERON:0002469 | 90.09 | gold quality |
| duodenum | UBERON:0002114 | 89.44 | gold quality |
| zone of skin | UBERON:0000014 | 86.64 | gold quality |
| right lobe of liver | UBERON:0001114 | 85.62 | gold quality |
| body of pancreas | UBERON:0001150 | 84.77 | gold quality |
| jejunal mucosa | UBERON:0000399 | 84.49 | gold quality |
| rectum | UBERON:0001052 | 82.81 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 82.74 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 82.66 | gold quality |
| transverse colon | UBERON:0001157 | 82.40 | gold quality |
| small intestine | UBERON:0002108 | 81.97 | gold quality |
| minor salivary gland | UBERON:0001830 | 81.69 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 79.55 | gold quality |
| mouth mucosa | UBERON:0003729 | 79.16 | gold quality |
| pancreas | UBERON:0001264 | 78.31 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 78.09 | gold quality |
| colonic epithelium | UBERON:0000397 | 77.71 | gold quality |
| ileal mucosa | UBERON:0000331 | 76.80 | silver quality |
| vagina | UBERON:0000996 | 76.23 | gold quality |
| body of stomach | UBERON:0001161 | 76.18 | gold quality |
| gall bladder | UBERON:0002110 | 76.11 | gold quality |
| metanephros cortex | UBERON:0010533 | 75.56 | gold quality |
| colonic mucosa | UBERON:0000317 | 74.34 | gold quality |
| liver | UBERON:0002107 | 73.63 | gold quality |
| right uterine tube | UBERON:0001302 | 73.61 | gold quality |
| prostate gland | UBERON:0002367 | 73.54 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 6.18 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
5 targeting CBLC, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-548AU-3P | 99.70 | 68.22 | 1373 |
| HSA-MIR-6512-3P | 99.65 | 66.07 | 1468 |
| HSA-MIR-6720-5P | 99.65 | 66.22 | 1459 |
| HSA-MIR-7154-3P | 97.65 | 65.02 | 985 |
Literature-anchored findings (GeneRIF, showing 15)
- Data demonstrate that two E3 ligases of different classes, CBLC and AIP4, can interact and cooperate to down-regulate EGFR signaling. (PMID:12226085)
- c-Cbl is a negative regulator of hepatocyte growth factor/receptor tyrosine kinase Met signaling in B cells, mediating ubiquitination and, consequently, proteosomal degradation of Met, with a role in Met-mediated tumorigenesis. (PMID:12244174)
- Src is a preferential target of Cbl-c for degradation (PMID:14661060)
- ubiquitin protein ligase activity is regulated in c-Cbl by phosphorylation-induced conformational change and constitutive activation by tyrosine to glutamate point mutations (PMID:15117950)
- the N terminus of Cbl-c contributes to the binding to the E2 and phosphorylation of Tyr-341 leads to a decrease in affinity and an increase in the E3 activity of Cbl-c (PMID:20525694)
- The ubiquitin ligase activity of Cbl-c by the direct interaction of the LIM zinc coordinating domain of Hic5 is demonstrated. (PMID:23145173)
- This retrospective multicentre study evaluates clinical, biochemical and genetic findings in 88 cblC patients (PMID:24599607)
- the effects of two pathogenic missense mutations on the the catalytic activities of the human B12-processing chaperone CblC (PMID:25809485)
- Silencing of CBLC causes increased sensitivity to PARP1 inhibitor olaparib in breast cancer cell line models and that defective homologous recombination (HR) DNA repair is the likely cause. (PMID:25883215)
- Data suggest that ubiquitin ligase CBLC controls mostly network organization of the Golgi Apparatus. (PMID:26393512)
- Methylmalonic aciduria with homocystinuria cblC is a multisystemic metabolic disease affecting cobalamin metabolism. The presence of retinal alterations in cblC is a common feature and it is reported to develop more frequently and into a more severe form in the early-onset phenotype, suggesting to some extent a correlation with the biochemical phenotype (PMID:28481040)
- ectopic expression of CBLC enhanced the activation of EGFR and downstream ERK1/2 signaling after ligand stimulation by competing with CBL for EGFR binding.. (PMID:29945960)
- Cbl-c is the most recently identified Cbl protein and is expressed exclusively in epithelial cells. Data mining reveals Cbl-c mutations associated with solid tumors. Subsequent cell-based analysis demonstrates a loss of E3 function and dominant negative effects for one of these mutations. (PMID:31260484)
- Stabilization of AURKA by the E3 ubiquitin ligase CBLC in lung adenocarcinoma. (PMID:35149839)
- CBLC inhibits the proliferation and metastasis of breast cancer cells via ubiquitination and degradation of CTTN. (PMID:36043996)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Cblc | ENSMUSG00000040525 |
| rattus_norvegicus | Cblc | ENSRNOG00000018953 |
| drosophila_melanogaster | Cbl | FBGN0020224 |
| caenorhabditis_elegans | WBGENE00004829 |
Paralogs (2): CBL (ENSG00000110395), CBLB (ENSG00000114423)
Protein
Protein identifiers
E3 ubiquitin-protein ligase CBL-C — Q9ULV8 (reviewed: Q9ULV8)
Alternative names: RING finger protein 57, RING-type E3 ubiquitin transferase CBL-C, SH3-binding protein CBL-3, SH3-binding protein CBL-C, Signal transduction protein CBL-C
All UniProt accessions (2): Q9ULV8, A0A2R8Y647
UniProt curated annotations — full annotation on UniProt →
Function. Acts as an E3 ubiquitin-protein ligase, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and then transfers it to substrates promoting their degradation by the proteasome. Functionally coupled with the E2 ubiquitin-protein ligases UB2D1, UB2D2 and UB2D3. Regulator of EGFR mediated signal transduction; upon EGF activation, ubiquitinates EGFR. Isoform 1, but not isoform 2, inhibits EGF stimulated MAPK1 activation. Promotes ubiquitination of SRC phosphorylated at ‘Tyr-419’. In collaboration with CD2AP may act as regulatory checkpoint for Ret signaling by modulating the rate of RET degradation after ligand activation; CD2AP converts it from an inhibitor to a promoter of RET degradation; the function limits the potency of GDNF on neuronal survival.
Subunit / interactions. Interacts with ubiquitin-conjugating enzyme E2 UBE2D2 and UBE2D3. Isoform 1 interacts with EGFR (tyrosine phosphorylated). Interacts with the SH3 domain proteins LYN and CRK. Interacts (via RING-type zinc finger) with TGFB1I1 (via LIM zinc-binding domain 2); the interaction is direct and enhances the E3 activity. Interacts directly with RET (inactive) and CD2AP; dissociates from RET upon RET activation by GDNF which also increases the interaction with CD2AP suggesting dissociation as CBLC:CD2AP complex. Interacts with SRC; the interaction is enhanced when SRC is phosphorylated at ‘Tyr-419’.
Tissue specificity. Ubiquitous.
Post-translational modifications. Phosphorylated on multiple tyrosine residues by SRC. Isoform 1, but not isoform 2, is phosphorylated on tyrosines by EGFR. Autoubiquitinated when phosphorylated at Tyr-341, enhanced by SRC; suggesting proteasomal degradation.
Activity regulation. Phosphorylation at Tyr-341 is necessary and sufficient for the activation of E3 activity.
Domain organisation. EF-hand-like and Sh2-like domains are required for N-terminal inhibition of E3 activity. The N-terminus is composed of the phosphotyrosine binding (PTB) domain, a short linker region and the RING-type zinc finger. The PTB domain, which is also called TKB (tyrosine kinase binding) domain, is composed of three different subdomains: a four-helix bundle (4H), a calcium-binding EF hand and a divergent SH2 domain. The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.
Miscellaneous. This protein has one functional calcium-binding site.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9ULV8-1 | 1, Long | yes |
| Q9ULV8-2 | 2, Short |
RefSeq proteins (2): NP_001124324, NP_036248* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001841 | Znf_RING | Domain |
| IPR003153 | Adaptor_Cbl_N_hlx | Domain |
| IPR011992 | EF-hand-dom_pair | Homologous_superfamily |
| IPR013083 | Znf_RING/FYVE/PHD | Homologous_superfamily |
| IPR014741 | Adaptor_Cbl_EF_hand-like | Domain |
| IPR014742 | Adaptor_Cbl_SH2-like | Domain |
| IPR017907 | Znf_RING_CS | Conserved_site |
| IPR024159 | Cbl_PTB | Domain |
| IPR024162 | Adaptor_Cbl | Family |
| IPR036537 | Adaptor_Cbl_N_dom_sf | Homologous_superfamily |
| IPR036860 | SH2_dom_sf | Homologous_superfamily |
Pfam: PF02262, PF02761, PF02762, PF13920
UniProt features (59 total): helix 16, mutagenesis site 12, strand 10, region of interest 6, binding site 4, sequence conflict 2, turn 2, chain 1, domain 1, modified residue 1, splice variant 1, sequence variant 1, zinc finger region 1, compositionally biased region 1
Structure
Experimental structures (PDB)
7 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3VRP | X-RAY DIFFRACTION | 1.52 |
| 3VRN | X-RAY DIFFRACTION | 1.64 |
| 3VRO | X-RAY DIFFRACTION | 1.8 |
| 9OGW | X-RAY DIFFRACTION | 1.8 |
| 3VRR | X-RAY DIFFRACTION | 2 |
| 3VRQ | X-RAY DIFFRACTION | 2.39 |
| 3OP0 | X-RAY DIFFRACTION | 2.52 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9ULV8-F1 | 80.85 | 0.54 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (4): 199; 201; 210; 264
Post-translational modifications (1): 341
Mutagenesis-validated functional residues (12):
| Position | Phenotype |
|---|---|
| 244 | abolishes interaction with egfr. decreases interaction with src and abolishes src ubiquitination. |
| 244 | no effect on interaction with egfr and src as well as on src ubiquitination. |
| 264 | abolishes interaction with egfr. decreases interaction with src and abolishes src ubiquitination. |
| 265 | enhances interaction with egfr and src as well as src ubiquitination. |
| 266 | decreases interactions with egfr and src as well as src ubiquitination. |
| 268 | abolishes interaction with egfr. decreases interaction with and ubiquitination of src. |
| 276 | no effect on interaction with ret. binds slightly to src, this interaction is independent of src phosphorylation. strong |
| 341 | induces e3 activity and autoubiquitination. releases ubiquitin-conjugating enzyme e2 ube2d2 faster. |
| 341 | abolishes activation by egf stimulation and enhancement by tgfb1i1 of e3 activity. |
| 341 | abolishes e3 activity. |
| 351 | no effect on tgfb1i1 and src interactions. abolishes src ubiquitination. abolishes interaction with tgfb1i1; when associ |
| 366 | abolishes interaction with tgfb1i1. abolishes interaction with tgfb1i1; when associated with a-351. |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 111 (showing top):
GSE45365_HEALTHY_VS_MCMV_INFECTION_CD8_TCELL_IFNAR_KO_UP, GOBP_NEGATIVE_REGULATION_OF_NEURON_APOPTOTIC_PROCESS, GOBP_REGULATION_OF_ERBB_SIGNALING_PATHWAY, GOBP_NEGATIVE_REGULATION_OF_ERBB_SIGNALING_PATHWAY, ROVERSI_GLIOMA_COPY_NUMBER_UP, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, GOBP_NEGATIVE_REGULATION_OF_MAPK_CASCADE, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_SIGNAL_TRANSDUCTION, KEGG_ERBB_SIGNALING_PATHWAY, GOBP_ERBB_SIGNALING_PATHWAY, CHARAFE_BREAST_CANCER_BASAL_VS_MESENCHYMAL_UP, KEGG_PATHWAYS_IN_CANCER, GOBP_PROTEIN_STABILIZATION, GOBP_POST_TRANSLATIONAL_PROTEIN_MODIFICATION, GOBP_REGULATION_OF_PROTEIN_STABILITY
GO Biological Process (11): ubiquitin-dependent protein catabolic process (GO:0006511), signal transduction (GO:0007165), cell surface receptor signaling pathway (GO:0007166), protein ubiquitination (GO:0016567), negative regulation of epidermal growth factor receptor signaling pathway (GO:0042059), negative regulation of MAPK cascade (GO:0043409), negative regulation of neuron apoptotic process (GO:0043524), protein stabilization (GO:0050821), response to glial cell derived neurotrophic factor (GO:1990790), regulation of signaling (GO:0023051), protein catabolic process (GO:0030163)
GO Molecular Function (11): phosphotyrosine residue binding (GO:0001784), epidermal growth factor receptor binding (GO:0005154), calcium ion binding (GO:0005509), zinc ion binding (GO:0008270), SH3 domain binding (GO:0017124), receptor tyrosine kinase binding (GO:0030971), ubiquitin protein ligase activity (GO:0061630), ubiquitin-protein transferase activity (GO:0004842), protein binding (GO:0005515), transferase activity (GO:0016740), metal ion binding (GO:0046872)
GO Cellular Component (2): plasma membrane (GO:0005886), membrane raft (GO:0045121)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| signaling | 2 |
| protein ubiquitination | 1 |
| modification-dependent protein catabolic process | 1 |
| cell communication | 1 |
| cellular process | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| signal transduction | 1 |
| protein modification by small protein conjugation | 1 |
| epidermal growth factor receptor signaling pathway | 1 |
| regulation of epidermal growth factor receptor signaling pathway | 1 |
| negative regulation of ERBB signaling pathway | 1 |
| MAPK cascade | 1 |
| regulation of MAPK cascade | 1 |
| negative regulation of intracellular signal transduction | 1 |
| negative regulation of apoptotic process | 1 |
| regulation of neuron apoptotic process | 1 |
| neuron apoptotic process | 1 |
| regulation of protein stability | 1 |
| response to growth factor | 1 |
| regulation of biological process | 1 |
| macromolecule catabolic process | 1 |
| protein metabolic process | 1 |
| protein phosphorylated amino acid binding | 1 |
| growth factor receptor binding | 1 |
| metal ion binding | 1 |
| transition metal ion binding | 1 |
| protein domain specific binding | 1 |
| signaling receptor binding | 1 |
| protein tyrosine kinase binding | 1 |
| ubiquitin-protein transferase activity | 1 |
| ubiquitin-like protein ligase activity | 1 |
| ubiquitin-like protein transferase activity | 1 |
| binding | 1 |
| catalytic activity | 1 |
| cation binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| membrane microdomain | 1 |
Protein interactions and networks
STRING
586 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CBLC | UBE2U | Q5VVX9 | 543 |
| CBLC | CRK | P46108 | 499 |
| CBLC | LYN | P07948 | 417 |
| CBLC | RNF223 | E7ERA6 | 377 |
| CBLC | CBLL2 | Q8N7E2 | 372 |
| CBLC | ZNF462 | Q96JM2 | 348 |
| CBLC | FYN | P06241 | 345 |
| CBLC | GRB2 | P29354 | 306 |
| CBLC | ATP2C2 | O75185 | 303 |
| CBLC | EGFR | P00533 | 302 |
| CBLC | RNF39 | Q9H2S5 | 290 |
| CBLC | CRKL | P46109 | 289 |
| CBLC | SH3KBP1 | Q96B97 | 285 |
| CBLC | VAV1 | P15498 | 281 |
| CBLC | TRIM72 | Q6ZMU5 | 279 |
IntAct
63 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CBLC | ITCH | psi-mi:“MI:0915”(physical association) | 0.600 |
| CBLC | ITCH | psi-mi:“MI:0403”(colocalization) | 0.600 |
| ITCH | CBLC | psi-mi:“MI:0915”(physical association) | 0.600 |
| YES1 | CBLC | psi-mi:“MI:0915”(physical association) | 0.560 |
| CBLC | UBE2K | psi-mi:“MI:0915”(physical association) | 0.560 |
| ATXN1 | CBLC | psi-mi:“MI:0915”(physical association) | 0.560 |
| TARDBP | CBLC | psi-mi:“MI:0915”(physical association) | 0.560 |
| CBLC | SHC1 | psi-mi:“MI:0915”(physical association) | 0.550 |
| CBLC | GAK | psi-mi:“MI:0914”(association) | 0.530 |
| CBLC | MGME1 | psi-mi:“MI:0914”(association) | 0.530 |
| INPPL1 | psi-mi:“MI:0914”(association) | 0.500 | |
| CRK | CBLC | psi-mi:“MI:0915”(physical association) | 0.490 |
| CBLC | BAP1 | psi-mi:“MI:0915”(physical association) | 0.490 |
BioGRID (116): CBLC (Two-hybrid), ABI2 (Affinity Capture-MS), WASF1 (Affinity Capture-MS), BRK1 (Affinity Capture-MS), NCKAP1 (Affinity Capture-MS), WASF2 (Affinity Capture-MS), LPP (Affinity Capture-MS), ZNHIT2 (Affinity Capture-MS), CYFIP2 (Affinity Capture-MS), GAK (Affinity Capture-MS), CYFIP1 (Affinity Capture-MS), MGME1 (Affinity Capture-MS), BAP1 (Two-hybrid), EGFR (Affinity Capture-Western), CBLC (Affinity Capture-Western)
ESM2 similar proteins: A0A8C2M425, A1L1J9, A1L504, A6NH21, A8WCG0, B0BNG2, F1RMN2, O43292, O75908, O76062, O77759, O88496, O88908, O89109, P38435, Q07175, Q0P4Y8, Q49LS0, Q5KR61, Q5RF50, Q5XK03, Q5ZKZ9, Q643R3, Q658P3, Q6MG14, Q6NVG1, Q767L9, Q7TN60, Q7TPN3, Q7TQM4, Q7ZWN0, Q8BKF1, Q8C3X8, Q8IUH8, Q8IZY2, Q8N130, Q8VC65, Q8WMV1, Q91YD1, Q9BU23
Diamond homologs: G3V8H4, P22681, P22682, P23092, Q13191, Q3TTA7, Q6DFR2, Q6GQL0, Q6NRE7, Q80XL1, Q8K4S7, Q9ULV8, O60683, Q09463, Q54S31, Q8HXW8, Q9FNI6
SIGNOR signaling
10 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| ARHGEF7 | down-regulates | CBLC | binding |
| CBLC | down-regulates | LRIG1 | ubiquitination |
| LRIG1 | up-regulates | CBLC | binding |
| INPPL1 | down-regulates | CBLC | binding |
| SRC | up-regulates | CBLC | phosphorylation |
| Ub:E2 | “up-regulates activity” | CBLC | ubiquitination |
| EPHB6 | “up-regulates activity” | CBLC | binding |
| CBLC | “down-regulates quantity by destabilization” | RET | ubiquitination |
| SPRY2 | down-regulates | CBLC | |
| CBLC | “down-regulates quantity by destabilization” | EGFR | polyubiquitination |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 32 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Signaling by Receptor Tyrosine Kinases | 5 | 11.2× | 3e-03 |
| Antigen processing: Ubiquitination & Proteasome degradation | 6 | 9.7× | 2e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein modification process | 5 | 42.1× | 1e-05 |
| protein polyubiquitination | 7 | 27.9× | 8e-07 |
| ubiquitin-dependent protein catabolic process | 9 | 23.0× | 4e-08 |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
94 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 64 |
| Likely benign | 8 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1565 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:44780903:A:AG | acceptor_gain | 1.0000 |
| 19:44780903:AG:A | acceptor_gain | 1.0000 |
| 19:44780903:AGGC:A | acceptor_gain | 1.0000 |
| 19:44780904:G:GA | acceptor_gain | 1.0000 |
| 19:44780904:GG:G | acceptor_gain | 1.0000 |
| 19:44780904:GGC:G | acceptor_gain | 1.0000 |
| 19:44780904:GGCG:G | acceptor_gain | 1.0000 |
| 19:44781047:GCCCG:G | donor_gain | 1.0000 |
| 19:44781052:G:GG | donor_gain | 1.0000 |
| 19:44781056:G:GG | donor_gain | 1.0000 |
| 19:44781203:CCAGG:C | acceptor_loss | 1.0000 |
| 19:44781204:CAGG:C | acceptor_loss | 1.0000 |
| 19:44781205:AGG:A | acceptor_loss | 1.0000 |
| 19:44781206:G:A | acceptor_loss | 1.0000 |
| 19:44781206:GGT:G | acceptor_gain | 1.0000 |
| 19:44781206:GGTGT:G | acceptor_gain | 1.0000 |
| 19:44781370:G:T | donor_gain | 1.0000 |
| 19:44784394:G:GT | donor_gain | 1.0000 |
| 19:44784397:GGCTT:G | donor_gain | 1.0000 |
| 19:44784398:GCTT:G | donor_gain | 1.0000 |
| 19:44784398:GCTTG:G | donor_gain | 1.0000 |
| 19:44784402:G:GG | donor_gain | 1.0000 |
| 19:44790000:CCA:C | acceptor_loss | 1.0000 |
| 19:44790002:A:AC | acceptor_loss | 1.0000 |
| 19:44790002:A:AG | acceptor_gain | 1.0000 |
| 19:44790003:G:GG | acceptor_gain | 1.0000 |
| 19:44790003:GCT:G | acceptor_gain | 1.0000 |
| 19:44790003:GCTA:G | acceptor_gain | 1.0000 |
| 19:44790003:GCTAC:G | acceptor_gain | 1.0000 |
| 19:44790087:CAGAG:C | donor_loss | 1.0000 |
AlphaMissense
3059 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:44784301:T:A | W273R | 0.995 |
| 19:44784301:T:C | W273R | 0.995 |
| 19:44784280:A:C | S266R | 0.989 |
| 19:44784282:C:A | S266R | 0.989 |
| 19:44784282:C:G | S266R | 0.989 |
| 19:44784272:T:C | F263S | 0.988 |
| 19:44784303:G:C | W273C | 0.988 |
| 19:44784303:G:T | W273C | 0.988 |
| 19:44781358:T:C | F218L | 0.987 |
| 19:44781360:T:A | F218L | 0.987 |
| 19:44781360:T:G | F218L | 0.987 |
| 19:44784265:T:G | Y261D | 0.987 |
| 19:44793498:T:C | F388L | 0.987 |
| 19:44793500:C:A | F388L | 0.987 |
| 19:44793500:C:G | F388L | 0.987 |
| 19:44784271:T:C | F263L | 0.985 |
| 19:44784273:C:A | F263L | 0.985 |
| 19:44784273:C:G | F263L | 0.985 |
| 19:44792454:G:C | K359N | 0.982 |
| 19:44792454:G:T | K359N | 0.982 |
| 19:44782422:G:A | G237D | 0.981 |
| 19:44792428:T:A | C351S | 0.981 |
| 19:44792428:T:C | C351R | 0.981 |
| 19:44792429:G:C | C351S | 0.981 |
| 19:44784304:G:C | A274P | 0.980 |
| 19:44792429:G:A | C351Y | 0.979 |
| 19:44792430:C:G | C351W | 0.979 |
| 19:44781346:T:C | F214L | 0.978 |
| 19:44781348:C:A | F214L | 0.978 |
| 19:44781348:C:G | F214L | 0.978 |
dbSNP variants (sampled 300 via entrez): RS1000151116 (19:44783862 C>T), RS1000593338 (19:44778172 C>G,T), RS1000666675 (19:44777999 G>T), RS1000690482 (19:44798287 C>G), RS1000755141 (19:44792976 G>A), RS1000799855 (19:44784966 T>G), RS1000848555 (19:44793233 T>C), RS1000856224 (19:44790656 G>A), RS1000955289 (19:44787204 T>A), RS1001058255 (19:44796344 G>A,T), RS1001168415 (19:44784881 A>G,T), RS1001180280 (19:44789464 C>T), RS1001244785 (19:44794036 T>G), RS1001489898 (19:44777292 CAA>C,CA,CAAA), RS1001559609 (19:44796169 C>A,T)
Disease associations
OMIM: gene MIM:608453 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5724772 (SINGLE PROTEIN)
Clinical evidence (CIViC)
Drug × variant × indication: 1 predictive associations from 1 curated evidence items.
| Variant | Therapy | Indication | Effect | Level | CIViC |
|---|---|---|---|---|---|
| CBLC EXPRESSION | Olaparib | Cancer | Resistance | CIViC D | EID805 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
Binding affinities (BindingDB)
444 measured of 445 human assays (445 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| (S)-2-(6-(cyclopentyloxy)-4-(3-((4- methyl-4H-1,2,4-triazol-3- yl)methyl)oxetan-3-yl)pyridin-2-yl)-6- ((2-isopropyl-4-methylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 5.5 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[6-cyclopropyl-4-[3-[(4-methyl-1,2,4-triazol-3-yl)methyl]oxetan-3-yl]-2-pyridinyl]-6-[[(1-methylcyclobutyl)amino]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 5.6 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[3-[3,3-difluoro-1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]phenyl]-6-[(1S)-1-[(1-methylcyclobutyl)amino]ethyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 5.8 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[3-(ethylamino)-5-[1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]phenyl]-6-[[(1-methylcyclobutyl)amino]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 6 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[3-[3,3-difluoro-1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]-5-(ethylamino)phenyl]-6-[[(1-methylcyclobutyl)amino]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 6.4 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[3-[3-[(R)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]oxetan-3-yl]phenyl]-6-[(1S)-1-[(1-methylcyclobutyl)amino]ethyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 6.7 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-(ethylthio)-4-(1-((4-methyl-4H- 1,2,4-triazol-3- yl)methyl)cyclobutyl)pyridin-2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 6.8 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(3-((R)-fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-(((S)-2-methyl-1,4-oxazepan-4- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 7 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (S)-2-(6-(allylamino)-4-(1-((4-methyl- 4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)pyridin-2-yl)-6-((2- isopropyl-4-methylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 7 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[4-[3,3-difluoro-1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]-6-(ethylamino)-2-pyridinyl]-6-[[(2S)-4-methyl-2-propan-2-ylpiperazin-1-yl]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 7.1 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (S)-6-((2-isopropyl-4-methylpiperazin- 1-yl)methyl)-2-(3-(3-((4-methyl-4H- 1,2,4-triazol-3-yl)methyl)oxetan-3- yl)phenyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 7.1 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[4-[1-[(S)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]-6-(2-hydroxyethylamino)-2-pyridinyl]-6-[[(2S)-4-methyl-2-propan-2-ylpiperazin-1-yl]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 7.2 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (S)-2-(3-(3,3-difluoro-1-((4-methyl-4H- 1,2,4-triazol-3- yl)methyl)cyclobutyl)phenyl)-6-((2- isopropyl-4-methylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 7.5 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[3-[3-[(R)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]oxetan-3-yl]phenyl]-6-[(1R)-1-[(1-methylcyclobutyl)amino]ethyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 7.6 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-((cyclopropylmethyl)amino)-4-(1- ((S)-fluoro(4-methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)pyridin-2-yl)-6- (((S)-2-isopropyl-4-methylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 7.9 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(3-((R)-fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-(((S)-4-(2-fluoroethyl)-2- isopropylpiperazin-1-yl)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 8 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(1-((R)-fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)cyclobutyl)phenyl)-6- (((S)-2-isopropylpiperazin-1-yl)methyl)- 4-(trifluoromethyl)isoindolin-1-one | IC50 | 8 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-ethoxy-4-(1-((4-methyl-4H-1,2,4- triazol-3-yl)methyl)cyclobutyl)pyridin-2- yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 8 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (R)-4-bromo-2-(3-(3-(fluoro(4-methyl- 4H-1,2,4-triazol-3-yl)methyl)oxetan-3- yl)phenyl)-6-(((1- methylcyclobutyl)amino)methyl) isoindolin-1-one | IC50 | 8.2 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[4-[1-[(R)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]-6-(2-hydroxyethylamino)-2-pyridinyl]-6-[[(2S)-4-methyl-2-propan-2-ylpiperazin-1-yl]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 8.3 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(isopropylamino)-5-(1-((4-methyl- 4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)phenyl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 8.3 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (S)-2-(6-(cyclopentylamino)-4-(3-((4- methyl-4H-1,2,4-triazol-3- yl)methyl)oxetan-3-yl)pyridin-2-yl)-6- ((2-isopropyl-4-methylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one formate | IC50 | 9.1 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-(cyclopentyloxy)-4-(3-((4-methyl- 4H-1,2,4-triazol-3-yl)methyl)oxetan-3- yl)pyridin-2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 9.5 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 6-((S)-1-amino-2-cyclopropylethyl)-2- (3-(3-((R)-fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 4-(trifluoromethyl)isoindolin-1-one | IC50 | 9.6 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (R)-2-(3-(3-(fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-(((3-fluoropropyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 9.8 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-(cyclopentylamino)-4-(3-((4- methyl-4H-1,2,4-triazol-3- yl)methyl)oxetan-3-yl)pyridin-2-yl)-6- (((1-methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 9.9 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(3,3-difluoro-1-((S)-fluoro(4- methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)phenyl)-6-(((S)-4- ethyl-2-isopropylpiperazin-1-yl)methyl)- 4-(trifluoromethyl)isoindolin-1-one | IC50 | 9.9 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-(ethylamino)-4-(3-((4-methyl-4H- 1,2,4-triazol-3-yl)methyl)oxetan-3- yl)pyridin-2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 10 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(4-(1-((4-methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)-6- (methylamino)pyridin-2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one formate | IC50 | 10 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (S)-2-(6-ethoxy-4-(1-((4-methyl-4H- 1,2,4-triazol-3- yl)methyl)cyclobutyl)pyridin-2-yl)-6-((2- isopropyl-4-methylpiperazin-1 - yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 10 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(3-((R)-fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-(((S)-2-isopropyl-4-methylpiperazin- 1-yl)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[3-[3,3-difluoro-1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]phenyl]-6-[[(1-methylcyclobutyl)amino]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-[6-(cyclopropylmethylamino)-4-[1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]-2-pyridinyl]-6-[[(1-methylcyclobutyl)amino]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 6-[[(1-methylcyclobutyl)amino]methyl]-2-[6-methylsulfanyl-4-[1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]-2-pyridinyl]-4-(trifluoromethyl)-3H-isoindol-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (S)-6-(6-((2-isopropyl-4- methylpiperazin-1-yl)methyl)-1-oxo-4- (trifluoromethyl)isoindolin-2-yl)-4-(1-((4- methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)picolinonitrile | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-ethoxy-4-(3-((4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)pyridin- 2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(4-(1-((4-methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)-6- (methylthio)pyridin-2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 6-(((cyclopropylmethyl)amino)methyl)- 2-(3-(3,3-difluoro-1-((4-methyl-4H- 1,2,4-triazol-3- yl)methyl)cyclobutyl)phenyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-isobutyl-4-(1-((4-methyl-4H-1,2,4- triazol-3-yl)methyl)cyclobutyl)pyridin-2- yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one formate | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-butyl-4-(1-((4-methyl-4H-1,2,4- triazol-3-yl)methyl)cyclobutyl)pyridin-2- yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-ethoxy-4-(1-((4-methyl-4H-1,2,4- triazol-3-yl)methyl)cyclobutyl)pyridin-2- yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(6-((cyclopropylmethyl)amino)-4-(1- ((4-methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)pyridin-2-yl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(ethylamino)-5-(3-((4-methyl-4H- 1,2,4-triazol-3-yl)methyl)oxetan-3- yl)phenyl)-6-(((1- methylcyclobutyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 11 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(3((R)-fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-(((S)-2-isopropylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 12 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 2-(3-(3,3-difluoro-1-((R)-fluoro(4- methyl-4H-1,2,4-triazol-3- yl)methyl)cyclobutyl)phenyl)-6-(((S)-2- isopropyl-4-methylpiperazin-1- yl)methyl)-4-(trifluoromethyl)isoindolin- 1-one | IC50 | 12 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (R)-2-(3-(3-(fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-((propylamino)methyl)-4- (trifluoromethyl)isoindolin-1-one formate | IC50 | 12 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| (R)-2-(3-(3-(fluoro(4-methyl-4H-1,2,4- triazol-3-yl)methyl)oxetan-3-yl)phenyl)- 6-(((1- methylcyclopropyl)amino)methyl)-4- (trifluoromethyl)isoindolin-1-one | IC50 | 12 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 4-(2,2-difluoroethyl)-2-[3-[3-[(R)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]oxetan-3-yl]phenyl]-6-[[(1-methylcyclobutyl)amino]methyl]-3H-isoindol-1-one | IC50 | 12 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
| 4-(2,2-difluoroethyl)-2-[3-[3,3-difluoro-1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]phenyl]-6-[[(1-methylcyclobutyl)amino]methyl]-3H-isoindol-1-one | IC50 | 12 nM | US-20250230147: LACTAMS AS CBL-B INHIBITORS |
ChEMBL bioactivities
7 potent at pChembl≥5 of 7 total, top 7 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.10 | IC50 | 8 | nM | CHEMBL5593645 |
| 8.00 | IC50 | 10 | nM | CHEMBL5568649 |
| 7.52 | IC50 | 30 | nM | CHEMBL5565433 |
| 7.40 | IC50 | 40 | nM | CHEMBL5568870 |
| 6.96 | IC50 | 110 | nM | CHEMBL5562897 |
| 6.68 | Kd | 210 | nM | CHEMBL5563408 |
| 6.66 | IC50 | 220 | nM | CHEMBL5592177 |
PubChem BioAssay actives
8 with measured affinity, of 9 total; 8 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 6-cyclopropyl-N-[3-[3,3-difluoro-1-[(R)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]phenyl]-4-[[(2S)-4-methyl-2-propan-2-ylpiperazin-1-yl]methyl]pyridine-2-carboxamide | 2107202: Inhibition of c-Cbl (unknown origin) by HTRF method | ic50 | 0.0080 | uM |
| N-[3-[3-(cyanomethyl)-1-(4-methyl-1,2,4-triazol-3-yl)cyclobutyl]phenyl]-6-[[(3S)-3-(difluoromethyl)piperidin-1-yl]methyl]imidazo[1,2-a]pyridine-8-carboxamide | 2107207: Inhibition of c-Cbl (unknown origin) expressed in Escherichia coli measured for 90 mins by HTRF method | ic50 | 0.0100 | uM |
| 3-[3-[3-methyl-1-(4-methyl-1,2,4-triazol-3-yl)cyclobutyl]phenyl]-1-[(1S)-1-(1-methylpyrazol-4-yl)ethyl]-5-(trifluoromethyl)pyridin-2-one | 2107205: Inhibition of c-Cbl (unknown origin) by TR-FRET assay | ic50 | 0.0300 | uM |
| N-[3-[3-(cyanomethyl)-1-(4-methyl-1,2,4-triazol-3-yl)cyclobutyl]phenyl]-7-[1-[(3S)-3-methylpiperidin-1-yl]ethyl]-1H-pyrrolo[3,2-b]pyridine-5-carboxamide | 2107207: Inhibition of c-Cbl (unknown origin) expressed in Escherichia coli measured for 90 mins by HTRF method | ic50 | 0.0400 | uM |
| 2-[3-(cyclopentylamino)-5-[3,3-difluoro-1-[(4-methyl-1,2,4-triazol-3-yl)methyl]cyclobutyl]phenyl]-6-[[(1-methylcyclobutyl)amino]methyl]-4-(trifluoromethyl)-3H-isoindol-1-one | 2098225: Inhibition of C-Cbl (unknown origin) by TR-FRET assay | ic50 | 0.1100 | uM |
| 4-[2-cyclopropyl-6-[5-[[(1-fluorocyclobutyl)methylamino]methyl]-3-oxo-7-(trifluoromethyl)-1H-isoindol-2-yl]-4-pyridinyl]-3-(4-methyl-1,2,4-triazol-3-yl)benzonitrile | 2107202: Inhibition of c-Cbl (unknown origin) by HTRF method | ic50 | 0.2000 | uM |
| 6-[[[1-(methoxymethyl)cyclopropyl]amino]methyl]-2-[3-[3-methoxy-1-(4-methyl-1,2,4-triazol-3-yl)cyclobutyl]phenyl]-4-(trifluoromethyl)-3H-isoindol-1-one | 2107203: Binding affinity to c-Cbl (unknown origin) assessed as dissociation constant by SPR assay | kd | 0.2100 | uM |
| 6-[(2,2-difluoro-5-azaspiro[2.3]hexan-5-yl)methyl]-2-[3-[3-[(S)-fluoro-(4-methyl-1,2,4-triazol-3-yl)methyl]oxetan-3-yl]phenyl]-4-(trifluoromethyl)-3H-isoindol-1-one | 2098225: Inhibition of C-Cbl (unknown origin) by TR-FRET assay | ic50 | 0.2200 | uM |
CTD chemical–gene interactions
21 total (human), top 21 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression, decreases methylation, increases expression | 3 |
| entinostat | increases expression, affects cotreatment | 2 |
| Panobinostat | affects cotreatment, increases expression | 2 |
| bisphenol A | decreases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
| cupric chloride | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | increases expression, affects cotreatment | 1 |
| ICG 001 | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Benzo(a)pyrene | decreases methylation | 1 |
| Caffeine | decreases phosphorylation | 1 |
| Estradiol | affects cotreatment, decreases expression | 1 |
| Methapyrilene | decreases methylation | 1 |
| Progesterone | decreases expression | 1 |
| Smoke | increases expression | 1 |
| Thiram | decreases expression | 1 |
| Tobacco Smoke Pollution | increases expression | 1 |
| Valproic Acid | increases expression | 1 |
| Aflatoxin B1 | decreases expression | 1 |
| Cadmium Chloride | decreases expression | 1 |
ChEMBL screening assays
5 unique, capped per target: 5 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5539983 | Binding | Inhibition of C-Cbl (unknown origin) by TR-FRET assay | Rising Star in Immunotherapy: Development and Therapeutic Potential of Small-Molecule Inhibitors Targeting Casitas B Cell Lymphoma-b (Cbl-b). — J Med Chem |
Cellosaurus cell lines
3 cell lines: 3 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1LX | Abcam K-562 CBLC KO | Cancer cell line | Female |
| CVCL_D2IH | Abcam Raji CBLC KO | Cancer cell line | Male |
| CVCL_UQ29 | Abcam Jurkat CBLC KO | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Associated diseases: cancer
- Biomarker drugs (CIViC) (drugs whose response is associated with variants in this gene — CIViC predictive evidence, not targeting): Olaparib
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cancer