CBR4-DT

Summary

CBR4-DT (CBR4 divergent transcript, HGNC:55540) is a long non-coding RNA gene on chromosome 4q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55540
Approved symbol	CBR4-DT
Name	CBR4 divergent transcript
Location	4q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251445
Ensembl biotype	lncRNA
Entrez	121009646
RNAcentral	URS00026A1CA2 — lncRNA, 305 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000506933, ENST00000793527

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000506933 — 2 exons

Exon	Start	End
ENSE00004176473	169010309	169010456
ENSE00004176475	169010784	169011096

Expression profiles

Bgee: expression breadth broad, 72 present calls, max score 85.98.

Top tissues by expression

72 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	85.98	gold quality
right testis	UBERON:0004534	85.07	gold quality
testis	UBERON:0000473	84.95	gold quality
prefrontal cortex	UBERON:0000451	75.94	gold quality
monocyte	CL:0000576	69.41	gold quality
islet of Langerhans	UBERON:0000006	69.10	gold quality
bone marrow	UBERON:0002371	68.68	gold quality
multicellular organism	UBERON:0000468	67.17	gold quality
liver	UBERON:0002107	66.92	gold quality
blood	UBERON:0000178	66.29	gold quality
gastrocnemius	UBERON:0001388	64.86	gold quality
body of pancreas	UBERON:0001150	64.72	gold quality
granulocyte	CL:0000094	63.94	gold quality
tibial artery	UBERON:0007610	63.27	gold quality
ovary	UBERON:0000992	61.86	gold quality
vagina	UBERON:0000996	61.52	gold quality
right lobe of liver	UBERON:0001114	61.48	gold quality
right frontal lobe	UBERON:0002810	61.10	gold quality
ascending aorta	UBERON:0001496	61.03	gold quality
heart left ventricle	UBERON:0002084	60.22	gold quality
left ovary	UBERON:0002119	59.66	gold quality
esophagus	UBERON:0001043	59.65	gold quality
left adrenal gland cortex	UBERON:0035825	59.63	gold quality
Brodmann (1909) area 9	UBERON:0013540	59.59	gold quality
stomach	UBERON:0000945	59.58	gold quality
body of stomach	UBERON:0001161	59.40	gold quality
right hemisphere of cerebellum	UBERON:0014890	59.34	gold quality
esophagus mucosa	UBERON:0002469	59.27	gold quality
Ammon’s horn	UBERON:0001954	59.07	gold quality
omental fat pad	UBERON:0010414	58.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.