CCBE1-AS1

Summary

CCBE1-AS1 (CCBE1 antisense RNA 1, HGNC:58570) is a long non-coding RNA gene on chromosome 18q21.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58570
Approved symbol	CCBE1-AS1
Name	CCBE1 antisense RNA 1
Location	18q21.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267269
Ensembl biotype	lncRNA
Entrez	142592822

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000588298, ENST00000816259

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000588298 — 2 exons

Exon	Start	End
ENSE00002777900	59688196	59688400
ENSE00002827679	59685820	59686156

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 84.33.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.33	gold quality
colonic epithelium	UBERON:0000397	80.65	gold quality
cortical plate	UBERON:0005343	71.98	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.13	gold quality
sural nerve	UBERON:0015488	68.45	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.43	gold quality
ganglionic eminence	UBERON:0004023	65.37	gold quality
duodenum	UBERON:0002114	63.75	gold quality
left testis	UBERON:0004533	61.05	gold quality
testis	UBERON:0000473	60.82	gold quality
skeletal muscle tissue	UBERON:0001134	60.40	gold quality
calcaneal tendon	UBERON:0003701	60.36	gold quality
gall bladder	UBERON:0002110	60.29	gold quality
lymph node	UBERON:0000029	59.77	gold quality
right testis	UBERON:0004534	59.24	gold quality
liver	UBERON:0002107	58.84	gold quality
right uterine tube	UBERON:0001302	56.43	gold quality
adrenal tissue	UBERON:0018303	56.25	gold quality
right coronary artery	UBERON:0001625	56.21	gold quality
stromal cell of endometrium	CL:0002255	56.13	gold quality
islet of Langerhans	UBERON:0000006	55.15	gold quality
right lobe of liver	UBERON:0001114	54.70	gold quality
vermiform appendix	UBERON:0001154	54.32	gold quality
monocyte	CL:0000576	54.15	gold quality
kidney	UBERON:0002113	54.10	gold quality
muscle of leg	UBERON:0001383	53.91	gold quality
ovary	UBERON:0000992	53.79	gold quality
uterine cervix	UBERON:0000002	53.70	gold quality
blood	UBERON:0000178	53.41	gold quality
lung	UBERON:0002048	53.31	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.46

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.