CCDC110-AS1

Summary

CCDC110-AS1 (CCDC110 antisense RNA 1, HGNC:58917) is a long non-coding RNA gene on chromosome 4q35.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58917
Approved symbol	CCDC110-AS1
Name	CCDC110 antisense RNA 1
Location	4q35.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249679
Ensembl biotype	lncRNA
Entrez	105377590

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000512874, ENST00000657486, ENST00000669100, ENST00000671042, ENST00000725791, ENST00000725792, ENST00000725793, ENST00000725794, ENST00000725795

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000512874 — 2 exons

Exon	Start	End
ENSE00004049640	185471411	185471760
ENSE00004049643	185472115	185472828

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 93.70.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of stomach	UBERON:0001199	93.70	gold quality
hindlimb stylopod muscle	UBERON:0004252	90.67	gold quality
skeletal muscle tissue	UBERON:0001134	87.90	gold quality
muscle of leg	UBERON:0001383	85.65	gold quality
gastrocnemius	UBERON:0001388	85.57	gold quality
tibial artery	UBERON:0007610	84.09	gold quality
muscle tissue	UBERON:0002385	84.08	gold quality
popliteal artery	UBERON:0002250	84.07	gold quality
right atrium auricular region	UBERON:0006631	81.76	gold quality
ascending aorta	UBERON:0001496	81.50	gold quality
thoracic aorta	UBERON:0001515	81.09	gold quality
left coronary artery	UBERON:0001626	79.41	gold quality
right coronary artery	UBERON:0001625	78.95	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	77.92	gold quality
descending thoracic aorta	UBERON:0002345	77.83	gold quality
left uterine tube	UBERON:0001303	77.70	gold quality
lower esophagus muscularis layer	UBERON:0035833	76.52	gold quality
lower esophagus	UBERON:0013473	76.46	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	75.87	gold quality
heart	UBERON:0000948	75.86	gold quality
bone marrow cell	CL:0002092	75.11	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.96	silver quality
adenohypophysis	UBERON:0002196	74.07	gold quality
heart left ventricle	UBERON:0002084	73.64	gold quality
pituitary gland	UBERON:0000007	73.59	gold quality
body of uterus	UBERON:0009853	73.08	gold quality
sural nerve	UBERON:0015488	72.27	silver quality
right ovary	UBERON:0002118	72.22	gold quality
smooth muscle tissue	UBERON:0001135	71.98	gold quality
muscle layer of sigmoid colon	UBERON:0035805	71.28	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	5.83

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.