CCDC120
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Also known as JM11
Summary
CCDC120 (coiled-coil domain containing 120, HGNC:28910) is a protein-coding gene on chromosome Xp11.23, encoding Coiled-coil domain-containing protein 120 (Q96HB5). Centriolar protein required for centriole subdistal appendage assembly and microtubule anchoring in interphase cells.
This gene encodes a protein that contains a coiled-coil domain. Several alternatively spliced transcript variants encoding multiple isoforms have been found for this gene.
Source: NCBI Gene 90060 — RefSeq curated summary.
At a glance
- Gene–disease (curated): osteopetrosis (Limited, GenCC)
- Clinical variants (ClinVar): 145 total — 2 pathogenic
- MANE Select transcript:
NM_001163321
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:28910 |
| Approved symbol | CCDC120 |
| Name | coiled-coil domain containing 120 |
| Location | Xp11.23 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | JM11 |
| Ensembl gene | ENSG00000147144 |
| Ensembl biotype | protein_coding |
| OMIM | 300947 |
| Entrez | 90060 |
Gene structure
Transcript identifiers
Ensembl transcripts: 8 — 6 protein_coding, 2 retained_intron
ENST00000482476, ENST00000496529, ENST00000536628, ENST00000597275, ENST00000603906, ENST00000603986, ENST00000606812, ENST00000620388
RefSeq mRNA: 6 — MANE Select: NM_001163321
NM_001163321, NM_001163322, NM_001163323, NM_001271835, NM_001271836, NM_033626
CCDS: CCDS14316, CCDS55413, CCDS55414
Canonical transcript exons
ENST00000603986 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003514733 | 49067176 | 49068090 |
| ENSE00003605070 | 49058999 | 49059095 |
| ENSE00003615546 | 49068544 | 49069854 |
| ENSE00003621004 | 49061959 | 49062104 |
| ENSE00003658728 | 49062235 | 49062325 |
| ENSE00003714661 | 49064370 | 49064664 |
| ENSE00003721847 | 49065747 | 49065845 |
| ENSE00003740478 | 49062468 | 49062601 |
| ENSE00003747659 | 49065454 | 49065628 |
| ENSE00003751064 | 49063861 | 49064001 |
| ENSE00003754875 | 49065036 | 49065098 |
Expression profiles
Bgee: expression breadth ubiquitous, 162 present calls, max score 94.61.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 7.2465 / max 67.8850, expressed in 1358 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 196313 | 3.2966 | 532 |
| 196312 | 3.1557 | 1049 |
| 196311 | 0.7942 | 532 |
Top tissues by expression
242 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| lower esophagus mucosa | UBERON:0035834 | 94.61 | gold quality |
| esophagus mucosa | UBERON:0002469 | 89.93 | gold quality |
| skin of leg | UBERON:0001511 | 89.64 | gold quality |
| skin of abdomen | UBERON:0001416 | 88.62 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 85.22 | gold quality |
| buccal mucosa cell | CL:0002336 | 85.07 | gold quality |
| zone of skin | UBERON:0000014 | 84.80 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 84.70 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 84.41 | gold quality |
| cerebellar cortex | UBERON:0002129 | 84.30 | gold quality |
| metanephros cortex | UBERON:0010533 | 83.64 | gold quality |
| minor salivary gland | UBERON:0001830 | 83.53 | gold quality |
| cerebellum | UBERON:0002037 | 82.67 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 82.52 | gold quality |
| adenohypophysis | UBERON:0002196 | 82.52 | gold quality |
| esophagus | UBERON:0001043 | 82.34 | gold quality |
| vagina | UBERON:0000996 | 81.86 | gold quality |
| cortical plate | UBERON:0005343 | 81.64 | gold quality |
| ectocervix | UBERON:0012249 | 81.04 | gold quality |
| pituitary gland | UBERON:0000007 | 80.99 | gold quality |
| body of pancreas | UBERON:0001150 | 80.68 | gold quality |
| body of stomach | UBERON:0001161 | 80.61 | gold quality |
| mouth mucosa | UBERON:0003729 | 79.31 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 79.01 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 78.95 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 78.72 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 78.62 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 78.31 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 78.09 | gold quality |
| left ovary | UBERON:0002119 | 78.02 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 3.67 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
46 targeting CCDC120, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-10401-5P | 99.99 | 65.79 | 948 |
| HSA-MIR-4531 | 99.99 | 69.70 | 3181 |
| HSA-MIR-3185 | 99.99 | 68.12 | 1959 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-6793-5P | 99.97 | 65.95 | 758 |
| HSA-MIR-4302 | 99.89 | 67.94 | 1187 |
| HSA-MIR-383-3P | 99.85 | 65.84 | 1359 |
| HSA-MIR-204-5P | 99.79 | 71.62 | 2439 |
| HSA-MIR-211-5P | 99.79 | 71.65 | 2440 |
| HSA-MIR-3934-3P | 99.76 | 65.51 | 1351 |
| HSA-MIR-4755-5P | 99.71 | 70.34 | 2716 |
| HSA-MIR-5006-3P | 99.71 | 70.26 | 2728 |
| HSA-MIR-466 | 99.67 | 70.85 | 2863 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-6887-3P | 99.66 | 67.83 | 1778 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4516 | 99.61 | 67.78 | 3390 |
| HSA-MIR-6832-3P | 99.52 | 70.44 | 1726 |
| HSA-MIR-199A-5P | 99.51 | 69.71 | 1107 |
| HSA-MIR-199B-5P | 99.51 | 69.74 | 1098 |
| HSA-MIR-766-5P | 99.47 | 67.91 | 2225 |
| HSA-MIR-5703 | 99.10 | 67.09 | 2053 |
| HSA-MIR-143-5P | 98.98 | 68.87 | 946 |
| HSA-MIR-3127-3P | 98.94 | 67.34 | 1055 |
Literature-anchored findings (GeneRIF, showing 2)
- Arf6 guanine nucleotide exchange factor cytohesin-2 binds to CCDC120 and is transported along neurites to mediate neurite growth. (PMID:25326380)
- centrosome-binding proteins, coiled-coil domain containing (CCDC) 120 and CCDC68 are two novel subdistal appendages (SDA) components required for hierarchical SDA assembly in human cells. (PMID:28422092)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ccdc120a | ENSDARG00000012449 |
| danio_rerio | ccdc120b | ENSDARG00000032856 |
| mus_musculus | Ccdc120 | ENSMUSG00000031150 |
| rattus_norvegicus | Ccdc120 | ENSRNOG00000009687 |
Paralogs (1): INAVA (ENSG00000163362)
Protein
Protein identifiers
Coiled-coil domain-containing protein 120 — Q96HB5 (reviewed: Q96HB5)
All UniProt accessions (2): Q96HB5, S4R3T7
UniProt curated annotations — full annotation on UniProt →
Function. Centriolar protein required for centriole subdistal appendage assembly and microtubule anchoring in interphase cells. Together with CCDC68, cooperate with subdistal appendage components ODF2, NIN and CEP170 for hierarchical subdistal appendage assembly. Recruits NIN and CEP170 to centrosomes. Also required for neurite growth. Localizes CYTH2 to vesicles to allow its transport along neurites, and subsequent ARF6 activation and neurite growth.
Subunit / interactions. Interacts with NIN and CEP170; leading to recruit them to centrosomes. Directly interacts with CYTH2; this interaction stabilizes CCDC120, possibly by preventing ubiquitination.
Subcellular location. Cytoplasm. Cytoskeleton. Microtubule organizing center. Centrosome. Centriole. Cell projection. Neuron projection. Growth cone. Endosome.
Post-translational modifications. Ubiquitinated; interaction with CYTH2 may prevent ubiquitination.
Isoforms (5)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q96HB5-1 | 1 | yes |
| Q96HB5-2 | 2 | |
| Q96HB5-3 | 3 | |
| Q96HB5-4 | 4 | |
| Q96HB5-5 | 5 |
RefSeq proteins (6): NP_001156793, NP_001156794, NP_001156795, NP_001258764, NP_001258765, NP_296375 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR021774 | CUPID | Domain |
| IPR043447 | CCDC120/INAVA | Family |
Pfam: PF11819
UniProt features (15 total): compositionally biased region 4, region of interest 3, modified residue 3, splice variant 3, chain 1, coiled-coil region 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96HB5-F1 | 56.34 | 0.15 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (3): 360, 435, 358
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 107 (showing top):
RNGTGGGC_UNKNOWN, GOBP_MICROTUBULE_ANCHORING, AREB6_01, GOCC_MICROTUBULE_ORGANIZING_CENTER, AP1_Q4_01, SHETH_LIVER_CANCER_VS_TXNIP_LOSS_PAM3, BACH2_01, AAAGGGA_MIR204_MIR211, ARGGGTTAA_UNKNOWN, TGANTCA_AP1_C, TGTTTAC_MIR30A5P_MIR30C_MIR30D_MIR30B_MIR30E5P, GOCC_NEURON_PROJECTION, GOCC_CENTRIOLE, GOCC_CILIUM, GOCC_AXON
GO Biological Process (2): intracellular protein localization (GO:0008104), microtubule anchoring at centrosome (GO:0034454)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (8): endosome (GO:0005768), centriole (GO:0005814), growth cone (GO:0030426), centriolar subdistal appendage (GO:0120103), cytoplasm (GO:0005737), cytoskeleton (GO:0005856), cell projection (GO:0042995), neuron projection (GO:0043005)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| intracellular membraneless organelle | 2 |
| cellular anatomical structure | 2 |
| macromolecule localization | 1 |
| microtubule anchoring at microtubule organizing center | 1 |
| binding | 1 |
| endomembrane system | 1 |
| cytoplasmic vesicle | 1 |
| microtubule organizing center | 1 |
| site of polarized growth | 1 |
| distal axon | 1 |
| cilium | 1 |
| intracellular protein-containing complex | 1 |
| intracellular anatomical structure | 1 |
| plasma membrane bounded cell projection | 1 |
Protein interactions and networks
STRING
574 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CCDC120 | CCDC68 | Q9H2F9 | 919 |
| CCDC120 | CEP128 | Q6ZU80 | 898 |
| CCDC120 | CEP170 | Q5SW79 | 806 |
| CCDC120 | NIN | Q8N4C6 | 785 |
| CCDC120 | CNTRL | Q7Z7A1 | 739 |
| CCDC120 | CYTH2 | Q99418 | 643 |
| CCDC120 | SCLT1 | Q96NL6 | 636 |
| CCDC120 | CEP89 | Q96ST8 | 634 |
| CCDC120 | CEP83 | Q9Y592 | 615 |
| CCDC120 | FBF1 | Q8TES7 | 583 |
| CCDC120 | CEP164 | Q9UPV0 | 562 |
| CCDC120 | CYTH4 | Q9UIA0 | 556 |
| CCDC120 | CMTM5 | Q96DZ9 | 555 |
| CCDC120 | C2CD3 | Q4AC94 | 547 |
| CCDC120 | CC2D2A | Q9P2K1 | 536 |
IntAct
401 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CCDC120 | CEP170 | psi-mi:“MI:0403”(colocalization) | 0.820 |
| CCDC120 | CEP170 | psi-mi:“MI:0914”(association) | 0.820 |
| CEP170 | CCDC120 | psi-mi:“MI:0915”(physical association) | 0.820 |
| CCDC120 | CEP170 | psi-mi:“MI:0915”(physical association) | 0.820 |
| CCDC120 | CEP170 | psi-mi:“MI:0407”(direct interaction) | 0.820 |
| CEP170 | CCDC120 | psi-mi:“MI:0914”(association) | 0.820 |
| CEP170 | CCDC120 | psi-mi:“MI:0403”(colocalization) | 0.820 |
| CCDC120 | NIN | psi-mi:“MI:0403”(colocalization) | 0.680 |
| NIN | CCDC120 | psi-mi:“MI:0915”(physical association) | 0.680 |
| NIN | CCDC120 | psi-mi:“MI:0407”(direct interaction) | 0.680 |
| CCDC120 | NIN | psi-mi:“MI:0915”(physical association) | 0.680 |
| NIN | CCDC120 | psi-mi:“MI:0403”(colocalization) | 0.680 |
| CCDC120 | AIP | psi-mi:“MI:0914”(association) | 0.640 |
| CCDC120 | ODF2 | psi-mi:“MI:0403”(colocalization) | 0.600 |
| CCDC120 | ODF2 | psi-mi:“MI:0915”(physical association) | 0.600 |
| CCDC120 | PAC1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| PAC1 | CCDC120 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ZNF417 | CCDC120 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GAS2L2 | CCDC120 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (243): CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid), KRT40 (Two-hybrid), CCDC57 (Two-hybrid), CEP170P1 (Two-hybrid), BRCA1 (Two-hybrid), CCDC120 (Two-hybrid), CCDC120 (Two-hybrid)
ESM2 similar proteins: A0A0U1RQ45, A0A0U1RQS6, A0A2R8YCJ5, A2A699, A2AEV7, A6NGB7, A6NJG2, A6NKF7, A6NKL6, A6NL88, A8MVW0, A9JSM3, B2RU40, B8ZZ34, C9JH25, D4A9R4, J3QNX5, P0CG09, P98077, Q0VD38, Q14761, Q17QH7, Q29RK8, Q2KJ18, Q2M3V2, Q3SX20, Q5BJT1, Q5HZJ5, Q5RKR3, Q5T442, Q64697, Q69YZ2, Q6PB97, Q6PCT2, Q6UXK2, Q6ZMQ8, Q6ZVH7, Q6ZW31, Q80XF7, Q8BLS7
Diamond homologs: A2AEV7, Q3KP66, Q7TN12, Q920B0, Q96HB5, Q9Y2L6, Q8BIE6, Q9P2Q2, P26038, P26042, Q2HJ49, P26040, P31977, Q8HZQ5
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 106 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Intra-Golgi traffic | 5 | 23.2× | 2e-04 |
| Keratinization | 10 | 9.9× | 8e-06 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
145 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 2 |
| Likely pathogenic | 0 |
| Uncertain significance | 100 |
| Likely benign | 6 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (2)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1341233 | GRCh37/hg19 Xp22.33-q28(chrX:168546-155233731)x1 | Pathogenic |
| 190973 | hg18chrX:g.(48,802,381_48,809,279)_(48,829,265_48,854,335)del | Pathogenic |
SpliceAI
1545 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| X:49062232:CA:C | acceptor_loss | 1.0000 |
| X:49062233:A:AG | acceptor_gain | 1.0000 |
| X:49062234:G:C | acceptor_loss | 1.0000 |
| X:49062234:G:GG | acceptor_gain | 1.0000 |
| X:49062234:GA:G | acceptor_gain | 1.0000 |
| X:49062234:GACT:G | acceptor_gain | 1.0000 |
| X:49062234:GACTT:G | acceptor_gain | 1.0000 |
| X:49062464:CCAGC:C | acceptor_loss | 1.0000 |
| X:49062465:CAGCT:C | acceptor_loss | 1.0000 |
| X:49062466:A:AG | acceptor_gain | 1.0000 |
| X:49062466:AGCT:A | acceptor_gain | 1.0000 |
| X:49062467:G:GG | acceptor_gain | 1.0000 |
| X:49062467:G:GT | acceptor_loss | 1.0000 |
| X:49062467:GCT:G | acceptor_gain | 1.0000 |
| X:49062467:GCTG:G | acceptor_gain | 1.0000 |
| X:49062548:G:GT | donor_gain | 1.0000 |
| X:49062584:G:GG | donor_gain | 1.0000 |
| X:49062596:G:GT | donor_gain | 1.0000 |
| X:49062598:GGCG:G | donor_gain | 1.0000 |
| X:49062599:GCGG:G | donor_gain | 1.0000 |
| X:49065448:A:AG | acceptor_gain | 1.0000 |
| X:49065449:C:G | acceptor_gain | 1.0000 |
| X:49065451:CA:C | acceptor_loss | 1.0000 |
| X:49065452:A:AG | acceptor_gain | 1.0000 |
| X:49065452:A:T | acceptor_loss | 1.0000 |
| X:49065452:AGAG:A | acceptor_gain | 1.0000 |
| X:49065453:G:GG | acceptor_gain | 1.0000 |
| X:49065453:GA:G | acceptor_gain | 1.0000 |
| X:49065453:GAGG:G | acceptor_gain | 1.0000 |
| X:49065453:GAGGA:G | acceptor_gain | 1.0000 |
AlphaMissense
4388 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| X:49062576:T:C | L53P | 0.999 |
| X:49067903:T:A | W562R | 0.998 |
| X:49067903:T:C | W562R | 0.998 |
| X:49067905:G:C | W562C | 0.998 |
| X:49067905:G:T | W562C | 0.998 |
| X:49062599:G:C | A61P | 0.997 |
| X:49065793:A:C | S302R | 0.997 |
| X:49065795:T:A | S302R | 0.997 |
| X:49065795:T:G | S302R | 0.997 |
| X:49067297:A:C | S360R | 0.997 |
| X:49067299:T:A | S360R | 0.997 |
| X:49067299:T:G | S360R | 0.997 |
| X:49067906:T:G | Y563D | 0.997 |
| X:49062555:T:C | L46P | 0.996 |
| X:49064502:G:C | A153P | 0.996 |
| X:49067291:A:C | S358R | 0.996 |
| X:49067293:C:A | S358R | 0.996 |
| X:49067293:C:G | S358R | 0.996 |
| X:49067895:T:C | L559P | 0.996 |
| X:49067898:G:C | R560P | 0.996 |
| X:49064431:C:A | A129D | 0.995 |
| X:49062567:T:C | L50P | 0.994 |
| X:49062576:T:A | L53H | 0.994 |
| X:49062587:T:C | C57R | 0.994 |
| X:49064419:T:G | I125S | 0.994 |
| X:49064430:G:C | A129P | 0.994 |
| X:49065627:A:C | S286R | 0.994 |
| X:49065747:C:A | S286R | 0.994 |
| X:49065747:C:G | S286R | 0.994 |
| X:49065787:G:A | G300R | 0.994 |
dbSNP variants (sampled 300 via entrez): RS1000263512 (X:49052602 C>T), RS1000692841 (X:49069813 C>A), RS1001182264 (X:49063730 G>A), RS1001269192 (X:49054347 C>T), RS1001342996 (X:49054898 C>T), RS1002350111 (X:49057393 C>G), RS1003281689 (X:49059014 C>T), RS1003851663 (X:49052379 G>A), RS1004363207 (X:49061173 C>T), RS1004591159 (X:49068918 C>G,T), RS1004804471 (X:49068506 C>G,T), RS1004811815 (X:49054270 C>G,T), RS1005362030 (X:49063034 A>G), RS1005405982 (X:49053869 G>A,T), RS1005816436 (X:49056819 G>A)
Disease associations
OMIM: gene MIM:300947 | disease phenotypes: MIM:300896
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| osteopetrosis | Limited | X-linked |
Mondo (2): SLC35A2-congenital disorder of glycosylation (MONDO:0010478), osteopetrosis (MONDO:0017198)
Orphanet (1): SLC35A2-CDG (Orphanet:356961)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D010022 | Osteopetrosis | C05.116.099.708.702.678 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
23 total (human), top 23 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects cotreatment, decreases expression, increases abundance, increases expression | 2 |
| GSK-J4 | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| bisphenol F | affects cotreatment, increases expression | 1 |
| dicrotophos | increases expression | 1 |
| ethyl-p-hydroxybenzoate | increases expression | 1 |
| butyraldehyde | decreases expression | 1 |
| potassium nitrate | decreases expression | 1 |
| coumarin | increases phosphorylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Leflunomide | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Arsenic | affects cotreatment, decreases expression, increases abundance, increases expression | 1 |
| Benzo(a)pyrene | decreases methylation | 1 |
| Caffeine | increases phosphorylation | 1 |
| Dexamethasone | affects cotreatment, increases expression | 1 |
| Indomethacin | affects cotreatment, increases expression | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Thiram | decreases expression | 1 |
| Urethane | increases expression | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, increases expression | 1 |
| 2,4-Dichlorophenoxyacetic Acid | decreases expression | 1 |
Clinical trials (associated diseases)
18 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00004402 | PHASE3 | COMPLETED | Phase III Randomized Study of Interferon Gamma in Children With Severe, Congenital Osteopetrosis |
| NCT00638820 | PHASE2 | TERMINATED | Reduced Intensity AlloTransplant For Osteopetrosis |
| NCT00968864 | PHASE2 | TERMINATED | T-cell Depleted Alternative Donor Transplantation |
| NCT02171104 | PHASE2 | ACTIVE_NOT_RECRUITING | MT2013-31: Allo HCT for Metabolic Disorders and Severe Osteopetrosis |
| NCT02666768 | PHASE2 | COMPLETED | ACTIMMUNE in Intermediate Osteopetrosis |
| NCT00145886 | PHASE1 | TERMINATED | rhPTH Therapy for Low Turnover Bone Fragility |
| NCT00775931 | PHASE2/PHASE3 | COMPLETED | Allogeneic Transplantation For Severe Osteopetrosis |
| NCT01019876 | PHASE2/PHASE3 | COMPLETED | Risk-Adapted Allogeneic Stem Cell Transplantation For Mixed Donor Chimerism In Patients With Non-Malignant Diseases |
| NCT01087398 | PHASE2/PHASE3 | UNKNOWN | Hematopoietic Stem Cell Transplantation for Malignant Infantile Osteopetrosis |
| NCT00730314 | PHASE1/PHASE2 | COMPLETED | Unrelated Hematopoietic Stem Cell Transplantation(HSCT) for Genetic Diseases of Blood Cells |
| NCT02065869 | PHASE1/PHASE2 | TERMINATED | Safety Study of Gene Modified Donor T-cells Following TCRαβ+ Depleted Stem Cell Transplant |
| NCT03301168 | PHASE1/PHASE2 | ACTIVE_NOT_RECRUITING | Study of Gene Modified Donor T-cells Following TCR Alpha Beta Positive Depleted Stem Cell Transplant |
| NCT00043329 | Not specified | COMPLETED | Post Marketing Surveillance Study of Actimmune in Patients With Severe, Malignant Osteopetrosis |
| NCT00145587 | Not specified | TERMINATED | Stem Cell Transplantation for Children Affected With Osteopetrosis |
| NCT01199094 | Not specified | COMPLETED | Clinical Assessment of Patients With High Bone Mass Due to Mutation in Lrp5 |
| NCT01200017 | Not specified | NO_LONGER_AVAILABLE | Expanded Access Protocol (EAP) Using the CliniMACS® Device for Pediatric Haplocompatible Donor Stem Cell Transplant |
| NCT03333200 | Not specified | RECRUITING | Longitudinal Study of Neurodegenerative Disorders |
| NCT06521580 | Not specified | COMPLETED | Outcomes of Patients With Osteopetrosis Weight-bearing Bone Fractures |
Related Atlas pages
- Associated diseases: osteopetrosis
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): osteopetrosis, SLC35A2-congenital disorder of glycosylation