CCDC191
gene geneOn this page
Summary
CCDC191 (coiled-coil domain containing 191, HGNC:29272) is a protein-coding gene on chromosome 3q13.31, encoding Coiled-coil domain-containing protein 191 (Q8NCU4).
At a glance
- Clinical variants (ClinVar): 151 total — 1 pathogenic
- GTEx eGene: eQTL in 17 tissues, sQTL in 8 (q < 0.05)
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 1.03 (unconstrained)
- MANE Select transcript:
NM_020817 - Notable: 151 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:29272 |
| Approved symbol | CCDC191 |
| Name | coiled-coil domain containing 191 |
| Location | 3q13.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000163617 |
| Ensembl biotype | protein_coding |
| Entrez | 57577 |
Gene structure
Transcript identifiers
Ensembl transcripts: 18 — 11 protein_coding, 4 nonsense_mediated_decay, 2 retained_intron, 1 protein_coding_CDS_not_defined
MANE Select: ENST00000295878
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 2, TSL 3: 2, TSL 4: 1, TSL 5: 2
ENST00000295878, ENST00000460813, ENST00000463695, ENST00000480588, ENST00000481358, ENST00000483766, ENST00000491000, ENST00000527855, ENST00000907458, ENST00000907459, ENST00000918262, ENST00000955809, ENST00000955810, ENST00000980234, ENST00000980235, ENST00001013641, ENST00001112084, ENST00001140921
RefSeq mRNA: 3 — MANE Select: NM_020817
NM_001353766, NM_001353767, NM_020817
CCDS: CCDS2977
Canonical transcript exons
ENST00000295878 — 17 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001241468 | 113978186 | 113978331 |
| ENSE00001241499 | 114004637 | 114004746 |
| ENSE00001241569 | 113964137 | 113965359 |
| ENSE00001241579 | 114056377 | 114056526 |
| ENSE00003486443 | 114053597 | 114053635 |
| ENSE00003488467 | 114002456 | 114002538 |
| ENSE00003500847 | 114034925 | 114035148 |
| ENSE00003517551 | 114018678 | 114018868 |
| ENSE00003525315 | 114046591 | 114046732 |
| ENSE00003543984 | 114031626 | 114031779 |
| ENSE00003554165 | 114036608 | 114036786 |
| ENSE00003557259 | 114010772 | 114011021 |
| ENSE00003561892 | 113980650 | 113980793 |
| ENSE00003568361 | 113978858 | 113979010 |
| ENSE00003578327 | 114042703 | 114042846 |
| ENSE00003664534 | 114001595 | 114001696 |
| ENSE00003785323 | 114005508 | 114005962 |
Expression profiles
Bgee: expression breadth ubiquitous, 195 present calls, max score 94.82.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 3.9145 / max 108.5483, expressed in 1362 samples.
Highest expression (Bgee): uterine tube, bronchial epithelial cell, bronchus, sural nerve, male germ line stem cell (sensu Vertebrata) in testis.
Genetic regulation across tissues (GTEx eQTL / sQTL)
CCDC191 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 17 tissues and its splicing (sQTL) in 8 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 25 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Thyroid | sqtl | 4.0e-06 | +0.38 | 3:114059610:A:AT |
| Artery Aorta | eqtl | 6.6e-05 | -0.54 | 3:114098076:G:T |
| Pituitary | eqtl | 4.1e-04 | +0.18 | 3:113984127:C:T |
| Artery Tibial | eqtl | 4.7e-04 | -0.40 | 3:114098076:G:T |
| Lung | eqtl | 5.3e-04 | -0.44 | 3:113968024:C:T |
| Skin Not Sun Exposed Suprapubic | sqtl | 1.6e-03 | +0.94 | 3:113556694:T:A |
| Testis | eqtl | 2.2e-03 | -0.59 | 3:113968024:C:T |
| Adipose Subcutaneous | eqtl | 3.2e-03 | -0.33 | 3:114098076:G:T |
| Nerve Tibial | eqtl | 3.5e-03 | -0.32 | 3:114098076:G:T |
| Brain Anterior cingulate cortex BA24 | eqtl | 3.8e-03 | -1.03 | 3:114577878:C:T |
| Pituitary | sqtl | 5.2e-03 | +0.45 | 3:114017719:C:T |
| Brain Nucleus accumbens basal ganglia | eqtl | 5.5e-03 | +0.73 | 3:113975062:T:TA |
| Skin Sun Exposed Lower leg | sqtl | 1.1e-02 | -1.17 | 3:114117769:C:T |
| Thyroid | eqtl | 1.4e-02 | +0.20 | 3:114056663:T:G |
| Esophagus Muscularis | eqtl | 1.5e-02 | +0.08 | 3:114111785:C:G |
| Cells Cultured fibroblasts | eqtl | 1.7e-02 | +0.25 | 3:113874564:T:C |
| Testis | sqtl | 2.0e-02 | +0.51 | 3:113985836:C:T |
| Nerve Tibial | sqtl | 2.4e-02 | +0.90 | 3:113607713:G:A |
| Brain Caudate basal ganglia | eqtl | 2.6e-02 | -0.28 | 3:114168417:T:C |
| Whole Blood | eqtl | 2.7e-02 | -0.39 | 3:114098076:G:T |
FANTOM5 promoters
1 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 43863 | 3.9145 | 1362 |
Top tissues by expression
showing 100 of 249 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 94.82 | gold quality |
| bronchial epithelial cell | CL:0002328 | 92.30 | gold quality |
| bronchus | UBERON:0002185 | 90.86 | gold quality |
| sural nerve | UBERON:0015488 | 90.74 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 89.39 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 87.25 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 86.25 | gold quality |
| calcaneal tendon | UBERON:0003701 | 84.53 | gold quality |
| adenohypophysis | UBERON:0002196 | 84.06 | gold quality |
| kidney epithelium | UBERON:0004819 | 83.99 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 83.91 | gold quality |
| caput epididymis | UBERON:0004358 | 83.86 | gold quality |
| pituitary gland | UBERON:0000007 | 83.72 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 82.94 | gold quality |
| thyroid gland | UBERON:0002046 | 82.64 | gold quality |
| right testis | UBERON:0004534 | 82.03 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 81.98 | gold quality |
| metanephros cortex | UBERON:0010533 | 81.92 | gold quality |
| left testis | UBERON:0004533 | 81.88 | gold quality |
| testis | UBERON:0000473 | 81.17 | gold quality |
| ventricular zone | UBERON:0003053 | 81.02 | gold quality |
| tibial nerve | UBERON:0001323 | 79.94 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 79.62 | gold quality |
| nasopharynx | UBERON:0001728 | 79.61 | gold quality |
| body of pancreas | UBERON:0001150 | 79.44 | gold quality |
| fallopian tube | UBERON:0003889 | 78.89 | gold quality |
| left ovary | UBERON:0002119 | 78.62 | gold quality |
| body of uterus | UBERON:0009853 | 78.17 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 78.09 | gold quality |
| endocervix | UBERON:0000458 | 78.00 | gold quality |
| metanephros | UBERON:0000081 | 77.81 | gold quality |
| skin of abdomen | UBERON:0001416 | 77.56 | gold quality |
| right ovary | UBERON:0002118 | 77.47 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 77.45 | gold quality |
| cortex of kidney | UBERON:0001225 | 77.17 | gold quality |
| spleen | UBERON:0002106 | 77.15 | gold quality |
| right lung | UBERON:0002167 | 77.05 | gold quality |
| pancreas | UBERON:0001264 | 77.00 | gold quality |
| right adrenal gland | UBERON:0001233 | 76.80 | gold quality |
| left uterine tube | UBERON:0001303 | 76.57 | gold quality |
| hypothalamus | UBERON:0001898 | 76.56 | gold quality |
| skin of leg | UBERON:0001511 | 76.52 | gold quality |
| spinal cord | UBERON:0002240 | 76.42 | gold quality |
| adrenal tissue | UBERON:0018303 | 76.40 | gold quality |
| rectum | UBERON:0001052 | 76.37 | gold quality |
| caudate nucleus | UBERON:0001873 | 76.26 | gold quality |
| corpus epididymis | UBERON:0004359 | 76.24 | gold quality |
| minor salivary gland | UBERON:0001830 | 76.23 | gold quality |
| skin of hip | UBERON:0001554 | 76.19 | silver quality |
| nucleus accumbens | UBERON:0001882 | 76.14 | gold quality |
| ectocervix | UBERON:0012249 | 75.99 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 75.96 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 75.90 | gold quality |
| bone marrow | UBERON:0002371 | 75.81 | gold quality |
| ovary | UBERON:0000992 | 75.78 | gold quality |
| gall bladder | UBERON:0002110 | 75.72 | gold quality |
| zone of skin | UBERON:0000014 | 75.70 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 75.70 | gold quality |
| endometrium | UBERON:0001295 | 75.52 | gold quality |
| left adrenal gland | UBERON:0001234 | 75.42 | gold quality |
| corpus callosum | UBERON:0002336 | 75.33 | gold quality |
| bone marrow cell | CL:0002092 | 75.20 | gold quality |
| seminal vesicle | UBERON:0000998 | 75.20 | gold quality |
| lower esophagus | UBERON:0013473 | 75.19 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 75.17 | gold quality |
| vermiform appendix | UBERON:0001154 | 75.15 | gold quality |
| amygdala | UBERON:0001876 | 75.09 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 75.04 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 75.04 | gold quality |
| uterine cervix | UBERON:0000002 | 75.02 | gold quality |
| right frontal lobe | UBERON:0002810 | 75.02 | gold quality |
| uterus | UBERON:0000995 | 74.97 | gold quality |
| transverse colon | UBERON:0001157 | 74.96 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 74.96 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 74.92 | gold quality |
| adrenal cortex | UBERON:0001235 | 74.89 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 74.83 | gold quality |
| adrenal gland | UBERON:0002369 | 74.72 | gold quality |
| kidney | UBERON:0002113 | 74.63 | gold quality |
| putamen | UBERON:0001874 | 74.50 | gold quality |
| upper leg skin | UBERON:0004262 | 74.48 | silver quality |
| small intestine | UBERON:0002108 | 74.41 | gold quality |
| oviduct epithelium | UBERON:0004804 | 74.41 | gold quality |
| right coronary artery | UBERON:0001625 | 74.39 | gold quality |
| urinary bladder | UBERON:0001255 | 74.28 | gold quality |
| mouth mucosa | UBERON:0003729 | 74.25 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 74.20 | gold quality |
| islet of Langerhans | UBERON:0000006 | 74.12 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 74.10 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 74.06 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 74.06 | gold quality |
| lymph node | UBERON:0000029 | 73.82 | gold quality |
| body of stomach | UBERON:0001161 | 73.79 | gold quality |
| tibial artery | UBERON:0007610 | 73.76 | gold quality |
| popliteal artery | UBERON:0002250 | 73.74 | gold quality |
| intestine | UBERON:0000160 | 73.70 | gold quality |
| mucosa of stomach | UBERON:0001199 | 73.70 | gold quality |
| prostate gland | UBERON:0002367 | 73.63 | gold quality |
| esophagus | UBERON:0001043 | 73.62 | gold quality |
| female reproductive system | UBERON:0000474 | 73.60 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-4 | yes | 55.64 |
| E-ANND-3 | yes | 9.43 |
| E-MTAB-6058 | no | 217.88 |
| E-MTAB-6379 | no | 174.24 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 77 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Choroid plexus | tissue | 23.1 | |
| Retina | tissue | 13.0 | |
| Periaqueductal gray | tissue | 11.4 | |
| Fallopian tube | tissue | 11.4 | low |
| Corpus callosum | tissue | 11.1 | |
| Pituitary gland | tissue | 10.6 | |
| Amygdala | tissue | 10.1 | |
| Septum | tissue | 9.9 | |
| Putamen | tissue | 9.8 | |
| Cerebral cortex | tissue | 9.6 | medium |
| Basal ganglia | tissue | 9.6 | medium |
| Hippocampal formation | tissue | 9.6 | |
| Ventral forebrain | tissue | 9.6 | |
| Occipital cortex | tissue | 9.6 | |
| Entorhinal cortex | tissue | 9.3 | |
| Olfactory bulb | tissue | 9.2 | |
| Prefrontal cortex | tissue | 9.1 | |
| Retrosplenial cortex | tissue | 9.1 | |
| Somatosensory cortex | tissue | 9.0 | |
| Hypothalamus | tissue | 8.9 | |
| Retrosplenial and cingulate cortex | tissue | 8.9 | |
| Temporal cortex | tissue | 8.9 | |
| Insular cortex | tissue | 8.9 | |
| Testis | tissue | 8.6 | medium |
| Motor cortex | tissue | 8.6 | |
| Superior colliculi | tissue | 8.6 | |
| Medulla oblongata | tissue | 8.3 | |
| Pons | tissue | 8.1 | |
| Midbrain | tissue | 8.1 | |
| Substantia nigra | tissue | 8.0 | |
| Spinal cord | tissue | 7.9 | |
| Thalamus | tissue | 7.8 | |
| Parathyroid gland | tissue | 7.5 | medium |
| Epididymis | tissue | 7.4 | not detected |
| Skin 1 | tissue | 7.2 | not detected |
| Thyroid gland | tissue | 6.8 | medium |
| Nucleus accumbens | tissue | 6.3 | |
| Locus coeruleus | tissue | 5.8 | |
| Hippocampus | tissue | 5.7 | medium |
| Cerebellum | tissue | 5.4 | medium |
| Endometrium 1 | tissue | 5.0 | medium |
| Seminal vesicle | tissue | 4.5 | medium |
| Breast | tissue | 4.4 | low |
| Lung | tissue | 4.4 | medium |
| Spleen | tissue | 4.4 | low |
| Postcentral gyrus | tissue | 4.3 | |
| Lymph node | tissue | 4.1 | not detected |
| Kidney | tissue | 4.1 | medium |
| Tonsil | tissue | 3.8 | not detected |
| Ovary | tissue | 3.5 | not detected |
| Prostate | tissue | 3.5 | not detected |
| Vagina | tissue | 3.3 | low |
| Gallbladder | tissue | 3.3 | medium |
| Cervix | tissue | 3.1 | low |
| Rectum | tissue | 3.0 | medium |
| Appendix | tissue | 3.0 | medium |
| Stomach 1 | tissue | 2.9 | medium |
| Pancreas | tissue | 2.8 | medium |
| Bone marrow | tissue | 2.7 | low |
| Thymus | tissue | 2.6 |
Brain sub-regions (HPA Brain Atlas): detected in 191; highest nTPM — White matter (11.1), Nucleus tractus solitarii (10.7), Periaquaductal grey, lateral (10.5), Periaquaductal grey, dorsal (10.1), Dorsal hippocampus (9.6).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting CCDC191 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 59 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6867-5P | 100.00 | 82.21 | 3464 |
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-10401-5P | 99.99 | 65.79 | 948 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-374A-5P | 99.90 | 71.34 | 2923 |
| HSA-MIR-374B-5P | 99.90 | 69.98 | 2734 |
| HSA-MIR-548D-3P | 99.87 | 70.67 | 4362 |
| HSA-MIR-548BB-3P | 99.86 | 70.58 | 4354 |
| HSA-MIR-369-3P | 99.85 | 70.52 | 2264 |
| HSA-MIR-548AC | 99.84 | 70.77 | 4351 |
| HSA-MIR-548H-3P | 99.84 | 70.80 | 4349 |
| HSA-MIR-548Z | 99.84 | 70.80 | 4349 |
| HSA-MIR-4679 | 99.76 | 69.19 | 1229 |
| HSA-MIR-2681-5P | 99.75 | 67.64 | 1655 |
| HSA-MIR-6745 | 99.74 | 65.33 | 1321 |
| HSA-MIR-586 | 99.65 | 70.40 | 2051 |
| HSA-MIR-561-3P | 99.64 | 70.90 | 3647 |
| HSA-MIR-567 | 99.63 | 68.57 | 1219 |
| HSA-MIR-497-3P | 99.61 | 69.71 | 1990 |
| HSA-MIR-4452 | 99.50 | 68.45 | 1493 |
| HSA-MIR-5571-5P | 99.49 | 66.99 | 1764 |
| HSA-MIR-3123 | 99.47 | 67.15 | 2693 |
| HSA-MIR-363-5P | 99.46 | 64.51 | 1015 |
Functional genomics
gnomAD constraint: pLI 1.42e-22, LOEUF 1.03, missense Z 1.52 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000295878 — one region, missense o/e 0.90.
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ccdc191 | ENSDARG00000027851 |
| mus_musculus | Ccdc191 | ENSMUSG00000022701 |
| rattus_norvegicus | Ccdc191 | ENSRNOG00000057815 |
| drosophila_melanogaster | CG17258 | FBGN0031496 |
Paralogs (1): SFI1 (ENSG00000198089)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1922661) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 2 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| male infertility | 1 |
| mydriasis | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Macaca fascicularis | Q95KD7 | 91.1% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| ZDHHC23 | protein-coding | 254887 |
| GRAMD1C | protein-coding | 54762 |
| QTRT2 | protein-coding | 79691 |
| ATP6V1A | protein-coding | 523 |
| DRD3 | protein-coding | 1814 |
| NAA50 | protein-coding | 80218 |
Protein
Protein identifiers
Coiled-coil domain-containing protein 191 — Q8NCU4 (reviewed: Q8NCU4)
All UniProt accessions (5): Q8NCU4, C9JA89, F8WCI8, F8WF68, H7C553
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8NCU4-1 | 1 | yes |
| Q8NCU4-2 | 2 |
RefSeq proteins (3): NP_001340695, NP_001340696, NP_065868* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR052270 | SFI1-like | Family |
UniProt features (15 total): coiled-coil region 4, region of interest 3, splice variant 3, sequence variant 2, compositionally biased region 2, chain 1
Structure
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8NCU4-F1 | 72.36 | 0.39 |
Human Protein Atlas
Protein class: Predicted intracellular proteins, UniProt - Evidence at transcript level
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): mitochondria
Antibody reliability (HPA): IH approved · IF approved
Function
Pathways and Gene Ontology
Reactome pathways
0 curated (TAS) of 0; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
MSigDB gene sets: 88 (showing top):
CAGCTG_AP4_Q5, AACWWCAANK_UNKNOWN, MYOD_01, MYCMAX_01, GRADE_COLON_AND_RECTAL_CANCER_UP, TGGAAA_NFAT_Q4_01, MYCMAX_03, MAX_01, AR_Q6, AP4_Q6_01, GKCGCNNNNNNNTGAYG_UNKNOWN, KIM_MYCN_AMPLIFICATION_TARGETS_DN, GSE14415_INDUCED_TREG_VS_TCONV_DN, BARX1_TARGET_GENES, CIITA_TARGET_GENES
Protein interactions and networks
STRING
showing 15 of 156 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CCDC191 | FBXW10B | O95170 | 465 |
| CCDC191 | FAM9C | Q8IZT9 | 444 |
| CCDC191 | STK24 | Q9Y6E0 | 410 |
| CCDC191 | LNX1 | Q8TBB1 | 409 |
| CCDC191 | BTBD16 | Q32M84 | 386 |
| CCDC191 | CDK20 | Q8IZL9 | 385 |
| CCDC191 | CIBAR2 | Q6ZTR7 | 380 |
| CCDC191 | FBXW10 | Q5XX13 | 351 |
| CCDC191 | ARL4D | P49703 | 335 |
| CCDC191 | RALGAPA1 | Q6GYQ0 | 295 |
| CCDC191 | RASSF6 | Q6ZTQ3 | 286 |
| CCDC191 | CLCN4 | P51793 | 280 |
| CCDC191 | SSPN | Q14714 | 277 |
| CCDC191 | CENPM | Q9NSP4 | 269 |
| CCDC191 | WBP2 | Q969T9 | 260 |
IntAct
Human interaction partners of CCDC191 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
2 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| EEF1A1 | physical association | 0.400 | 1 |
| RPN1 | physical association | 0.400 | 1 |
Disease & clinical
Genetic variants
Variant evidence for CCDC191: 151 ClinVar records (1 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.
ClinVar
151 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 114 |
| Likely benign | 5 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (1)
Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 1077161 | GRCh37/hg19 3q13.31(chr3:113623035-114368128)x1 | Pathogenic | no assertion criteria provided | 1 |
Per-variant reference — Sugi Variant
Explore CCDC191’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 30 predictions of 1,722):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 3:113978332–113978333 | acceptor_loss | 1.0000 | 6 |
| 3:113978338 | acceptor_gain | 1.0000 | |
| 3:113978346 | acceptor_gain | 1.0000 | |
| 3:113978856–113978857 | donor_loss | 1.0000 | 5 |
| 3:113980648–113980649 | donor_loss | 1.0000 | 4 |
| 3:113980794–113980795 | acceptor_loss | 1.0000 | 5 |
| 3:113980804 | acceptor_gain | 1.0000 | |
| 3:114001593–114001594 | donor_loss | 1.0000 | 5 |
| 3:114008494 | donor_gain | 1.0000 | |
| 3:114018688 | donor_gain | 1.0000 |
AlphaMissense
535 missense substitutions predicted likely pathogenic (of 6,226 scored), across 228 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M192 | 8 | 0.825 | 0.938 |
| W333 | 7 | 0.930 | 0.986 |
| W363 | 7 | 0.921 | 0.978 |
| W757 | 7 | 0.907 | 0.984 |
| W409 | 7 | 0.895 | 0.968 |
| W353 | 7 | 0.889 | 0.960 |
| W879 | 7 | 0.849 | 0.942 |
| R195 | 6 | 0.888 | 0.980 |
| F910 | 6 | 0.834 | 0.952 |
| W98 | 6 | 0.818 | 0.905 |
| D187 | 6 | 0.804 | 0.845 |
| M661 | 6 | 0.789 | 0.894 |
| H196 | 6 | 0.762 | 0.925 |
| W845 | 6 | 0.755 | 0.931 |
| M433 | 6 | 0.703 | 0.727 |
| M253 | 6 | 0.673 | 0.744 |
| F137 | 5 | 0.870 | 0.951 |
| R664 | 5 | 0.855 | 0.950 |
| F156 | 5 | 0.845 | 0.941 |
| F330 | 5 | 0.842 | 0.900 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
2 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Papillary Cell Carcinoma (TCGA) | favorable | 0.000134 |
| Rectum Adenocarcinoma (TCGA) | favorable | 0.000524 |
Disease associations
OMIM: gene `` | disease phenotypes:
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (CPIC guideline: no)
CTD chemical–gene interactions
14 total (human), top 14 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression | 2 |
| Acetaminophen | decreases expression, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| methylmercuric chloride | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| jinfukang | increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Benzo(a)pyrene | decreases expression | 1 |
| Estradiol | affects expression | 1 |
| Nickel | decreases expression | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Okadaic Acid | decreases expression | 1 |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): chromosome 3q13.31 deletion syndrome