CCL5
gene geneOn this page
Also known as RANTESSISdTCP228MGC17164
Summary
CCL5 (C-C motif chemokine ligand 5, HGNC:10632) is a protein-coding gene on chromosome 17q12, encoding C-C motif chemokine 5 (P13501). Chemoattractant for blood monocytes, memory T-helper cells and eosinophils.
This gene is one of several chemokine genes clustered on the q-arm of chromosome 17. Chemokines form a superfamily of secreted proteins involved in immunoregulatory and inflammatory processes. The superfamily is divided into four subfamilies based on the arrangement of the N-terminal cysteine residues of the mature peptide. This chemokine, a member of the CC subfamily, functions as a chemoattractant for blood monocytes, memory T helper cells and eosinophils. It causes the release of histamine from basophils and activates eosinophils. This cytokine is one of the major HIV-suppressive factors produced by CD8+ cells. It functions as one of the natural ligands for the chemokine receptor chemokine (C-C motif) receptor 5 (CCR5), and it suppresses in vitro replication of the R5 strains of HIV-1, which use CCR5 as a coreceptor. Alternative splicing results in multiple transcript variants that encode different isoforms.
Source: NCBI Gene 6352 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 15 total — 1 pathogenic
- Druggable target: yes
- MANE Select transcript:
NM_002985
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:10632 |
| Approved symbol | CCL5 |
| Name | C-C motif chemokine ligand 5 |
| Location | 17q12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | RANTES, SISd, TCP228, MGC17164 |
| Ensembl gene | ENSG00000271503 |
| Ensembl biotype | protein_coding |
| OMIM | 187011 |
| Entrez | 6352 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 3 protein_coding
ENST00000605140, ENST00000605509, ENST00000651122
RefSeq mRNA: 2 — MANE Select: NM_002985
NM_001278736, NM_002985
CCDS: CCDS11300, CCDS92290
Canonical transcript exons
ENST00000605140 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003460965 | 35871491 | 35872464 |
| ENSE00003562135 | 35880230 | 35880360 |
| ENSE00003581973 | 35878528 | 35878639 |
Expression profiles
Bgee: expression breadth ubiquitous, 131 present calls, max score 99.67.
FANTOM5 (CAGE): breadth broad, TPM avg 238.7002 / max 31055.2592, expressed in 901 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 165403 | 238.6880 | 900 |
| 165402 | 0.0121 | 4 |
Top tissues by expression
133 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| granulocyte | CL:0000094 | 99.67 | gold quality |
| leukocyte | CL:0000738 | 99.23 | gold quality |
| monocyte | CL:0000576 | 99.20 | gold quality |
| blood | UBERON:0000178 | 98.19 | gold quality |
| lymph node | UBERON:0000029 | 97.03 | gold quality |
| spleen | UBERON:0002106 | 96.22 | gold quality |
| gall bladder | UBERON:0002110 | 94.95 | gold quality |
| duodenum | UBERON:0002114 | 94.42 | gold quality |
| colonic epithelium | UBERON:0000397 | 93.70 | gold quality |
| vermiform appendix | UBERON:0001154 | 93.50 | gold quality |
| bone marrow | UBERON:0002371 | 93.41 | gold quality |
| bone marrow cell | CL:0002092 | 92.84 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 90.56 | gold quality |
| rectum | UBERON:0001052 | 89.52 | gold quality |
| small intestine | UBERON:0002108 | 89.20 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 88.93 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 87.34 | gold quality |
| right uterine tube | UBERON:0001302 | 87.18 | gold quality |
| right lung | UBERON:0002167 | 86.81 | gold quality |
| lung | UBERON:0002048 | 86.07 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 85.97 | gold quality |
| tonsil | UBERON:0002372 | 85.40 | gold quality |
| right coronary artery | UBERON:0001625 | 84.54 | gold quality |
| liver | UBERON:0002107 | 83.66 | gold quality |
| omental fat pad | UBERON:0010414 | 83.37 | gold quality |
| body of stomach | UBERON:0001161 | 82.62 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 82.56 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 82.09 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 82.00 | gold quality |
| fundus of stomach | UBERON:0001160 | 81.86 | gold quality |
Single-cell (SCXA)
Detected in 59 experiment(s), a significant marker in 48.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-120 | yes | 9434.78 |
| E-CURD-95 | yes | 8151.01 |
| E-CURD-85 | yes | 7106.75 |
| E-GEOD-139324 | yes | 5124.47 |
| E-CURD-89 | yes | 5121.78 |
| E-HCAD-8 | yes | 4765.52 |
| E-MTAB-10287 | yes | 4727.68 |
| E-MTAB-8410 | yes | 4358.19 |
| E-GEOD-125970 | yes | 4268.67 |
| E-GEOD-130148 | yes | 4018.14 |
| E-MTAB-6653 | yes | 3686.26 |
| E-CURD-126 | yes | 3490.73 |
| E-MTAB-8207 | yes | 3437.60 |
| E-MTAB-6701 | yes | 3260.00 |
| E-CURD-55 | yes | 3244.73 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, APP, AR, ATF2, ATF3, CD36, CEBPA, CEBPB, CEBPD, CREB1, DDIT3, ESR1, FOS, HIF1A, IRF1, IRF2, IRF3, IRF5, IRF6, IRF7, IRF8, IRX2, JUN, JUNB, JUND, KLF13, NFATC2, NFKB1, NFKB2, NFKB, NFKBIA, NFKBIB, NR3C1, PLIN3, PPARA, PPARG, PPP2CB, PTPN22, REL, RELA
miRNA regulators (miRDB)
22 targeting CCL5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6778-3P | 99.96 | 67.29 | 2693 |
| HSA-MIR-146A-5P | 99.96 | 68.93 | 988 |
| HSA-MIR-146B-5P | 99.96 | 69.13 | 977 |
| HSA-MIR-4725-3P | 99.96 | 69.53 | 2520 |
| HSA-MIR-6780B-5P | 99.96 | 69.60 | 2562 |
| HSA-MIR-7153-5P | 99.94 | 68.89 | 1006 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-4271 | 99.88 | 68.32 | 2244 |
| HSA-MIR-5010-3P | 99.83 | 70.60 | 2357 |
| HSA-MIR-6852-5P | 99.17 | 66.69 | 2073 |
| HSA-MIR-7151-3P | 99.04 | 69.72 | 2370 |
| HSA-MIR-4742-5P | 98.89 | 68.41 | 1542 |
| HSA-MIR-619-5P | 98.57 | 64.97 | 1988 |
| HSA-MIR-4536-5P | 98.47 | 64.39 | 657 |
| HSA-MIR-6742-3P | 97.95 | 64.50 | 1490 |
| HSA-MIR-645 | 97.28 | 66.30 | 486 |
| HSA-MIR-617 | 96.79 | 65.96 | 738 |
| HSA-MIR-5194 | 96.77 | 63.91 | 1021 |
| HSA-MIR-6738-5P | 96.33 | 63.61 | 815 |
| HSA-MIR-584-5P | 95.82 | 68.05 | 848 |
| HSA-MIR-1914-3P | 95.07 | 63.37 | 762 |
| HSA-MIR-758-5P | 93.99 | 64.46 | 534 |
Literature-anchored findings (GeneRIF, showing 40)
- Differential production of RANTES and MCP-1 in synovial fluid from the inflamed human knee. (PMID:11750041)
- RANTES levels in blood, quantities released from platelets ex vivo, and quantities released from SFFLRN stimulated platelets ex vivo were compared for preeclamptic and normal pregnancies. (PMID:11816717)
- synthesis was detected in human Leydig cells exposed to the Sendai virus, but not in human total germ cells (PMID:11897701)
- The prototypic inflammatory chemokine RANTES activates a defined transcriptional profile in fresh human monocytes consisting of stimulation of at least 42 genes of 5600 examined. (PMID:11907119)
- We determined that human serum contains a molecule that suppresses RANTES (CCL5) binding to endothelial cells, PBMC and CHO cells. (PMID:11920567)
- A translational rheostat for RFLAT-1 regulates RANTES expression in T lymphocytes. (PMID:12093895)
- modulating influence on HIV/AIDS by interacting with variants (PMID:12114533)
- in infants with respiratory syncytial virus bronchiolitis, the proportion of RANTES relative to IL-8 was significantly increased (PMID:12139952)
- CCR5 protein has a role as a HIV-1 receptor favoring the recruitment of fusiogenic proteins and the formation of a fusion pore. (PMID:12154092)
- TNF-alpha potently induced RANTES secretion, but IL-17 dose-dependently inhibited the TNF-alpha-induced RANTES secretion in human colonic subepithelial myofibroblasts. This was also observed at the mRNA level. (PMID:12165487)
- functional AhR are present in endometrial and endometriotic stromal cells and that TCDD up-regulates the expression of RANTES, providing a possible mechanistic link between dioxin exposure and chemokine expression in endometriosis. (PMID:12200463)
- Expression of RANTES is induced by stimulation of monocytic cells through Fc gamma receptors and involves activation of CCAAT enhancer-binding protein beta sites. (PMID:12218153)
- results demonstrate that both CCR1 and CCR4 are functional receptors on human mast cells with capacity to mediate migration towards CCL5 (PMID:12270118)
- role of viral accessory protein Vpr and Nef in RANTES/CCL5 expression (PMID:12359436)
- role of IL-12 and IFN-gamma on inducing inflammatory chemokine (CCL5) secretion and down-regulating CCR5 expression in human T cells (PMID:12377943)
- The RANTES(9-68)-heparin interaction has been characterized by a complex binding model that involves heparin-induced dimerization of the chemokine through a mechanism of positive cooperativity. (PMID:12475226)
- RANTES expression is regulated by CFTR in airway epithelial cells (PMID:12509457)
- Associations of RANTES polymorphisms with clinical outcomes and treatment responses of chronic hepatitis C. Hepatitis C virus-seropositive whites with the RANTES -403-A allele were less likely to have severe hepatic inflammation. (PMID:12557141)
- RANTES promoter -28G genotype and CCR5 promoter 59029A genotype may be independent risk factors for diabetic nephropathy in patients with type 2 diabetes and may have an additive effect on nephropathy. (PMID:12610055)
- mast cells may regulate lymphocytic infiltration in basal cell carcinoma through the production of RANTES (PMID:12660426)
- TNF-alpha-induced expression of RANTES plays important roles in cell-mediated liver injury in alcoholic liver diseases. (PMID:12663241)
- RANTES is not upregulated by leptin in human monocytic cells (PMID:12668159)
- Efficient leukocyte arrest in flow but not transmigration may thus require the presentation of RANTES oligomers to bridge surface-bound RANTES and CCR1. (PMID:12763925)
- The RANTES promoter polymorphism is a genetic risk factor for near-fatal asthma in Chinese children. (PMID:12789231)
- case-control study was performed to evaluate the role of -403G –> A and -28C –> G as susceptibility factors for HIV-1 infection in the Spanish population; data consistent with lack of association between these SNPs and HIV-1 infection in this population (PMID:12803993)
- Data suggest that in oral lichen planus, the presence of CCL5 and CXCL10 in the cytolytic granules of tissue-infiltrating CD8(+)T cells expressing CCR5 and CXCR3 reveals a potential self-recruiting mechanism involving activated effector cytotoxic T cells (PMID:12819030)
- Data are consistent with the lack of association between RANTES polymorphisms and endometriosis, but do not exclude a possible role of other variants within the RANTES gene in this pathology. (PMID:12837926)
- A putative signal transduction pathway leading to RANTES production from fibroblasts when the DR molecules were ligated was detected (PMID:12842758)
- dichotomous effects of RANTES on HIV-1 entry at the moment of infection, and on production and spread of virus progeny in primary macrophages (PMID:12960233)
- Two single nucleotide polymorphisms in RANTES promoter region and intron I were found to be associated with the genetic susceptibility to HIV-1 infection among Chinese and the In1.1C allele displayed a stronger association with HIV-1 infection in males. (PMID:14687494)
- RANTES expression and production increase in nasal mucosa (septal and turbinate portions) of allergic patients compared to the same mucosa in non-allergic patients (PMID:14687706)
- peritoneal macrophage stimulation of RANTES production by endometrium stromal cells could lead to a self-propagating recruitment of inflammatory cells that contribute to the development and progression of endometriotic lesions. (PMID:15001640)
- The study results indicated that the -403 and -28 alleles in the RANTES promoter region belong to the predictor gene set for allergic rhinitis and could be used in genomic analysis. (PMID:15064621)
- prior or simultaneous treatment of HEp-2 cells with recombinant human CCL5 provides dose-dependent inhibition of infection with RSV. (PMID:15122808)
- TWEAK acts on human keratinocytes as an inducer of RANTES via Fn14. (PMID:15140220)
- Our results demonstrate that IFNbeta plays a positive regulatory role in the expression of RANTES/CCL5 in human astrocytes through several distinct mechanisms (PMID:15228586)
- CCL% expression frequent in ATL and HTLV-I-infected cell lines; aberrant expression may impact pathophysiology of HTLV-I-associated diseases (PMID:15239133)
- SNP -403G may be associated with increased susceptibility to HIV infection, while -28G may be associated with advanced disease (PMID:15265023)
- A strong upregulation of MCP-1 and RANTES was observed in all the cases, mainly in tubular cells, and there was a strong correlation between the expression of these chemokines and NF-kappaB activation in the same cells. (PMID:15280531)
- RANTES haplotypes might contribute to polygenic interaction between hepatitis C virus and host immune system and could help to risk stratify patients prior to antiviral therapy. (PMID:15368437)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ccl35.2 | ENSDARG00000070378 |
| danio_rerio | ccl35.1 | ENSDARG00000103466 |
| mus_musculus | Ccl5 | ENSMUSG00000035042 |
Paralogs (26): CX3CL1 (ENSG00000006210), CCL26 (ENSG00000006606), CCL22 (ENSG00000102962), CCL17 (ENSG00000102970), CCL24 (ENSG00000106178), CCL7 (ENSG00000108688), CCL2 (ENSG00000108691), CCL8 (ENSG00000108700), CCL1 (ENSG00000108702), CCL20 (ENSG00000115009), CCL25 (ENSG00000131142), CCL21 (ENSG00000137077), XCL1 (ENSG00000143184), XCL2 (ENSG00000143185), CCL11 (ENSG00000172156), CCL19 (ENSG00000172724), CCL13 (ENSG00000181374), CCL23 (ENSG00000274736), CCL16 (ENSG00000275152), CCL4 (ENSG00000275302), CCL18 (ENSG00000275385), CCL15 (ENSG00000275718), CCL4L2 (ENSG00000276070), CCL3L3 (ENSG00000276085), CCL14 (ENSG00000276409), CCL3 (ENSG00000277632)
Protein
Protein identifiers
C-C motif chemokine 5 — P13501 (reviewed: P13501)
Alternative names: EoCP, Eosinophil chemotactic cytokine, SIS-delta, Small-inducible cytokine A5, T cell-specific protein P228, T-cell-specific protein RANTES
All UniProt accessions (3): A0A494C1Q1, D0EI67, P13501
UniProt curated annotations — full annotation on UniProt →
Function. Chemoattractant for blood monocytes, memory T-helper cells and eosinophils. Causes the release of histamine from basophils and activates eosinophils. May activate several chemokine receptors including CCR1, CCR3, CCR4 and CCR5. One of the major HIV-suppressive factors produced by CD8+ T-cells. Recombinant RANTES protein induces a dose-dependent inhibition of different strains of HIV-1, HIV-2, and simian immunodeficiency virus (SIV). The processed form RANTES(3-68) acts as a natural chemotaxis inhibitor and is a more potent inhibitor of HIV-1-infection. The second processed form RANTES(4-68) exhibits reduced chemotactic and HIV-suppressive activity compared with RANTES(1-68) and RANTES(3-68). May also be an agonist of the G protein-coupled receptor GPR75, stimulating inositol trisphosphate production and calcium mobilization through its activation. Together with GPR75, may play a role in neuron survival through activation of a downstream signaling pathway involving the PI3, Akt and MAP kinases. By activating GPR75 may also play a role in insulin secretion by islet cells.
Subunit / interactions. Homo and heterooligomers with other chemokines. Interacts with the brown dog tick evasin-4.
Subcellular location. Secreted.
Tissue specificity. Expressed in the follicular fluid (at protein level). T-cell and macrophage specific.
Post-translational modifications. N-terminal processed form RANTES(3-68) is produced by proteolytic cleavage, probably by DPP4, after secretion from peripheral blood leukocytes and cultured sarcoma cells. N-terminal processed form RANTES(4-68) is produced by proteolytic cleavage by cathepsin CTSG. The identity of the O-linked saccharides at Ser-27 and Ser-28 are not reported in PubMed:1380064. They are assigned by similarity.
Induction. By mitogens.
Similarity. Belongs to the intercrine beta (chemokine CC) family.
RefSeq proteins (2): NP_001265665, NP_002976* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000827 | Chemokine_CC_CS | Conserved_site |
| IPR001811 | Chemokine_IL8-like_dom | Domain |
| IPR036048 | Interleukin_8-like_sf | Homologous_superfamily |
| IPR039809 | Chemokine_b/g/d | Family |
Pfam: PF00048
UniProt features (30 total): mutagenesis site 7, strand 7, chain 3, helix 3, sequence conflict 2, glycosylation site 2, disulfide bond 2, signal peptide 1, sequence variant 1, site 1, modified residue 1
Structure
Experimental structures (PDB)
23 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5COY | X-RAY DIFFRACTION | 1.44 |
| 6STK | X-RAY DIFFRACTION | 1.52 |
| 1B3A | X-RAY DIFFRACTION | 1.6 |
| 1EQT | X-RAY DIFFRACTION | 1.6 |
| 6AEZ | X-RAY DIFFRACTION | 1.63 |
| 1U4P | X-RAY DIFFRACTION | 1.7 |
| 2VXW | X-RAY DIFFRACTION | 1.7 |
| 1U4L | X-RAY DIFFRACTION | 2 |
| 1U4M | X-RAY DIFFRACTION | 2 |
| 1U4R | X-RAY DIFFRACTION | 2.2 |
| 5UIW | X-RAY DIFFRACTION | 2.2 |
| 5L2U | X-RAY DIFFRACTION | 2.28 |
| 5DNF | X-RAY DIFFRACTION | 2.55 |
| 6LOG | X-RAY DIFFRACTION | 2.55 |
| 7F1R | ELECTRON MICROSCOPY | 3 |
| 5CMD | X-RAY DIFFRACTION | 3.09 |
| 7O7F | ELECTRON MICROSCOPY | 3.15 |
| 6C6D | X-RAY DIFFRACTION | 5.5 |
| 1HRJ | SOLUTION NMR | |
| 1RTN | SOLUTION NMR | |
| 1RTO | SOLUTION NMR | |
| 2L9H | SOLUTION NMR, SOLUTION SCATTERING | |
| 6FGP | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P13501-F1 | 89.51 | 0.69 |
Antibody-complex structures (SAbDab): 1 — 7O7F
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 25–26 (cleavage; by dpp4)
Post-translational modifications (1): 90
Disulfide bonds (2): 33–57, 34–73
Glycosylation sites (2): 27, 28
Mutagenesis-validated functional residues (7):
| Position | Phenotype |
|---|---|
| 31 | no effect on inhibition of activity by tick evasin-4. |
| 31 | reduced inhibition of activity by tick evasin-4. |
| 46 | no effect on inhibition of activity by tick evasin-4. |
| 49 | no effect on inhibition of activity by tick evasin-4. |
| 55 | no effect on inhibition of activity by tick evasin-4. |
| 67–70 | no effect on inhibition of activity by tick evasin-4. |
| 78–82 | no effect on inhibition of activity by tick evasin-4. |
Function
Pathways and Gene Ontology
Reactome pathways
12 pathways
| ID | Pathway |
|---|---|
| R-HSA-380108 | Chemokine receptors bind chemokines |
| R-HSA-418594 | G alpha (i) signalling events |
| R-HSA-6783783 | Interleukin-10 signaling |
| R-HSA-1280215 | Cytokine Signaling in Immune system |
| R-HSA-162582 | Signal Transduction |
| R-HSA-168256 | Immune System |
| R-HSA-372790 | Signaling by GPCR |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-HSA-375276 | Peptide ligand-binding receptors |
| R-HSA-388396 | GPCR downstream signalling |
| R-HSA-449147 | Signaling by Interleukins |
| R-HSA-500792 | GPCR ligand binding |
MSigDB gene sets: 767 (showing top):
GOBP_POSITIVE_REGULATION_OF_CALCIUM_ION_TRANSPORT, GOBP_REGULATION_OF_CELL_ACTIVATION, CREL_01, GOBP_REGULATION_OF_LEUKOCYTE_PROLIFERATION, GOBP_POSITIVE_REGULATION_OF_LYMPHOCYTE_APOPTOTIC_PROCESS, WALLACE_PROSTATE_CANCER_RACE_UP, GOBP_CELLULAR_RESPONSE_TO_VIRUS, GOBP_ANTIMICROBIAL_HUMORAL_RESPONSE, GOBP_DENDRITIC_CELL_MIGRATION, MCLACHLAN_DENTAL_CARIES_UP, GOBP_REGULATION_OF_T_CELL_CHEMOTAXIS, GOBP_MYELOID_LEUKOCYTE_MIGRATION, MODULE_169, GOBP_CELL_CHEMOTAXIS, LU_IL4_SIGNALING
GO Biological Process (65): dendritic cell chemotaxis (GO:0002407), monocyte chemotaxis (GO:0002548), regulation of chronic inflammatory response (GO:0002676), calcium ion transport (GO:0006816), intracellular calcium ion homeostasis (GO:0006874), exocytosis (GO:0006887), chemotaxis (GO:0006935), inflammatory response (GO:0006954), leukocyte cell-cell adhesion (GO:0007159), G protein-coupled receptor signaling pathway (GO:0007186), cell-cell signaling (GO:0007267), response to virus (GO:0009615), response to toxic substance (GO:0009636), positive regulation of macrophage chemotaxis (GO:0010759), positive regulation of T cell chemotaxis (GO:0010820), positive regulation of smooth muscle cell migration (GO:0014911), positive regulation of cell migration (GO:0030335), phospholipase D-activating G protein-coupled receptor signaling pathway (GO:0031583), positive regulation of TOR signaling (GO:0032008), positive regulation of cell-cell adhesion mediated by integrin (GO:0033634), positive regulation of homotypic cell-cell adhesion (GO:0034112), chemokine (C-C motif) ligand 5 signaling pathway (GO:0035689), positive regulation of T cell proliferation (GO:0042102), neutrophil activation (GO:0042119), host-mediated suppression of viral transcription (GO:0043922), cellular response to fibroblast growth factor stimulus (GO:0044344), positive regulation of viral genome replication (GO:0045070), negative regulation of viral genome replication (GO:0045071), positive regulation of innate immune response (GO:0045089), negative regulation of G protein-coupled receptor signaling pathway (GO:0045744), positive regulation of G protein-coupled receptor signaling pathway (GO:0045745), positive regulation of cell adhesion (GO:0045785), positive regulation of translational initiation (GO:0045948), eosinophil chemotaxis (GO:0048245), macrophage chemotaxis (GO:0048246), positive regulation of smooth muscle cell proliferation (GO:0048661), epithelial cell proliferation (GO:0050673), positive regulation of epithelial cell proliferation (GO:0050679), regulation of insulin secretion (GO:0050796), regulation of T cell activation (GO:0050863)
GO Molecular Function (16): phosphatidylinositol-4,5-bisphosphate phospholipase C activity (GO:0004435), protein kinase activity (GO:0004672), chemokine activity (GO:0008009), phospholipase activator activity (GO:0016004), receptor signaling protein tyrosine kinase activator activity (GO:0030298), CCR1 chemokine receptor binding (GO:0031726), CCR4 chemokine receptor binding (GO:0031729), CCR5 chemokine receptor binding (GO:0031730), chemoattractant activity (GO:0042056), chemokine receptor binding (GO:0042379), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), chemokine receptor antagonist activity (GO:0046817), CCR chemokine receptor binding (GO:0048020), cytokine activity (GO:0005125), protein binding (GO:0005515)
GO Cellular Component (4): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), cytoplasm (GO:0005737), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-9 pathways:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| Peptide ligand-binding receptors | 1 |
| GPCR downstream signalling | 1 |
| Signaling by Interleukins | 1 |
| Immune System | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
| Class A/1 (Rhodopsin-like receptors) | 1 |
| Cytokine Signaling in Immune system | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| CCR chemokine receptor binding | 3 |
| cellular anatomical structure | 3 |
| leukocyte chemotaxis | 2 |
| response to chemical | 2 |
| chemokine receptor binding | 2 |
| receptor ligand activity | 2 |
| dendritic cell migration | 1 |
| mononuclear cell migration | 1 |
| myeloid leukocyte migration | 1 |
| chronic inflammatory response | 1 |
| regulation of inflammatory response | 1 |
| metal ion transport | 1 |
| intracellular monoatomic cation homeostasis | 1 |
| calcium ion homeostasis | 1 |
| vesicle-mediated transport | 1 |
| secretion by cell | 1 |
| vesicle fusion to plasma membrane | 1 |
| taxis | 1 |
| defense response | 1 |
| cell-cell adhesion | 1 |
| G protein-coupled receptor activity | 1 |
| signal transduction | 1 |
| cell communication | 1 |
| signaling | 1 |
| response to other organism | 1 |
| positive regulation of leukocyte chemotaxis | 1 |
| regulation of macrophage chemotaxis | 1 |
| macrophage chemotaxis | 1 |
| regulation of granulocyte chemotaxis | 1 |
| positive regulation of macrophage migration | 1 |
| T cell chemotaxis | 1 |
| regulation of T cell chemotaxis | 1 |
| positive regulation of lymphocyte chemotaxis | 1 |
| positive regulation of T cell migration | 1 |
| smooth muscle cell migration | 1 |
| regulation of smooth muscle cell migration | 1 |
| positive regulation of cell migration | 1 |
| cell migration | 1 |
| regulation of cell migration | 1 |
| positive regulation of cell motility | 1 |
Protein interactions and networks
STRING
4024 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CCL5 | CCR2 | P41597 | 999 |
| CCL5 | CCR5 | P51681 | 999 |
| CCL5 | CCR1 | P32246 | 999 |
| CCL5 | CCR3 | P51677 | 999 |
| CCL5 | CXCR4 | P30991 | 997 |
| CCL5 | PF4 | P02776 | 996 |
| CCL5 | CXCR3 | P49682 | 996 |
| CCL5 | CXCR2 | P25025 | 993 |
| CCL5 | ACKR1 | Q16570 | 993 |
| CCL5 | CX3CR1 | P49238 | 982 |
| CCL5 | CCR7 | P32248 | 981 |
| CCL5 | CCRL2 | O00421 | 962 |
| CCL5 | ACKR2 | O00590 | 961 |
| CCL5 | CXCL10 | P02778 | 951 |
| CCL5 | CXCL9 | Q07325 | 949 |
IntAct
115 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CCL5 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.860 |
| CCL5 | CCL5 | psi-mi:“MI:0914”(association) | 0.860 |
| CCR5 | CCL5 | psi-mi:“MI:0915”(physical association) | 0.660 |
| CCL5 | CCR5 | psi-mi:“MI:0407”(direct interaction) | 0.660 |
| CCR5 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.660 |
| CCL17 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| CCL5 | CCL17 | psi-mi:“MI:0407”(direct interaction) | 0.640 |
| CCL17 | CCL5 | psi-mi:“MI:2364”(proximity) | 0.640 |
| CCL5 | PF4 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CCL2 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CCL11 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CCL13 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CCL16 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CCL20 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CCL21 | CCL5 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
BioGRID (81): CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), CCL5 (Two-hybrid), C4A (Affinity Capture-MS), NTMT1 (Affinity Capture-MS), SPATA20 (Affinity Capture-MS), AK4 (Affinity Capture-MS)
ESM2 similar proteins: A9QWQ1, O14625, O46675, O46676, O46677, O46678, O89098, O97919, P08317, P09340, P09341, P10147, P10855, P10889, P12850, P13236, P13501, P14095, P14097, P16619, P19875, P19876, P30782, P30882, P42831, P46632, P47854, P50229, P50230, P50231, P97272, Q17QA1, Q5EBF6, Q5I1Z0, Q5RA36, Q68A92, Q68AZ0, Q711P4, Q8HYQ1, Q8HYQ2
Diamond homologs: F5HET8, O00175, O00585, O00626, O55145, O88430, O97919, P10147, P10148, P10855, P13236, P13500, P13501, P14097, P14844, P16619, P27784, P28291, P28292, P30882, P42831, P46632, P47993, P49873, P50229, P50230, P50231, P51670, P51671, P52203, P55773, P55774, P61274, P61275, P78423, P80075, P80098, P80343, P82943, P97272
SIGNOR signaling
9 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| maraviroc | down-regulates | CCL5 | “chemical inhibition” |
| CCL5 | up-regulates | CCR1 | binding |
| CCL5 | up-regulates | CCR3 | binding |
| IRX2 | “down-regulates quantity by repression” | CCL5 | “transcriptional regulation” |
| CCL5 | “up-regulates activity” | CCR5 | binding |
| FOXP3 | “up-regulates quantity by expression” | CCL5 | “transcriptional regulation” |
| CCL5 | up-regulates | Metastasis | |
| CCL5 | “down-regulates quantity by repression” | hsa-miR-199a-5p | “post transcriptional regulation” |
| CCL5 | “down-regulates quantity by repression” | hsa-miR-200b-5p | “post transcriptional regulation” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 49 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Chemokine receptors bind chemokines | 22 | 105.6× | 2e-39 |
| Interleukin-10 signaling | 6 | 35.9× | 5e-07 |
| Class A/1 (Rhodopsin-like receptors) | 13 | 24.7× | 2e-13 |
| Peptide ligand-binding receptors | 13 | 24.7× | 2e-13 |
| GPCR ligand binding | 13 | 21.4× | 8e-13 |
| G alpha (i) signalling events | 17 | 17.0× | 3e-15 |
| Signaling by GPCR | 13 | 13.4× | 3e-10 |
| Signaling by Interleukins | 7 | 11.5× | 7e-05 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| eosinophil chemotaxis | 9 | 143.3× | 2e-16 |
| chemokine-mediated signaling pathway | 18 | 126.8× | 4e-32 |
| monocyte chemotaxis | 5 | 63.2× | 7e-07 |
| chemotaxis | 21 | 62.0× | 5e-31 |
| antimicrobial humoral immune response mediated by antimicrobial peptide | 17 | 59.9× | 2e-24 |
| neutrophil chemotaxis | 9 | 55.9× | 3e-12 |
| cell chemotaxis | 13 | 52.3× | 1e-17 |
| positive regulation of actin filament polymerization | 5 | 35.9× | 1e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
15 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 0 |
| Uncertain significance | 9 |
| Likely benign | 2 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (1)
| Variant ID | HGVS | Classification |
|---|---|---|
| 12740 | NM_002985.3(CCL5):c.76+231T>C | Pathogenic |
SpliceAI
426 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 17:35872460:CAAAG:C | acceptor_gain | 1.0000 |
| 17:35872465:C:CC | acceptor_gain | 1.0000 |
| 17:35878526:A:AC | donor_gain | 1.0000 |
| 17:35878527:C:CC | donor_gain | 1.0000 |
| 17:35878527:CA:C | donor_gain | 1.0000 |
| 17:35878527:CACGA:C | donor_gain | 1.0000 |
| 17:35872461:AAAG:A | acceptor_gain | 0.9900 |
| 17:35872462:AAG:A | acceptor_gain | 0.9900 |
| 17:35872463:AG:A | acceptor_gain | 0.9900 |
| 17:35872464:GCTG:G | acceptor_loss | 0.9900 |
| 17:35872465:CT:C | acceptor_loss | 0.9900 |
| 17:35872466:T:C | acceptor_loss | 0.9900 |
| 17:35878467:T:TA | donor_gain | 0.9900 |
| 17:35878638:ATCTG:A | acceptor_loss | 0.9900 |
| 17:35878639:TCTGG:T | acceptor_loss | 0.9900 |
| 17:35878640:C:CC | acceptor_gain | 0.9900 |
| 17:35878640:CT:C | acceptor_loss | 0.9900 |
| 17:35878641:T:G | acceptor_loss | 0.9900 |
| 17:35880228:A:AC | donor_gain | 0.9900 |
| 17:35880229:C:CC | donor_gain | 0.9900 |
| 17:35878519:GAGAC:G | donor_loss | 0.9800 |
| 17:35878520:AGAC:A | donor_loss | 0.9800 |
| 17:35878521:GAC:G | donor_loss | 0.9800 |
| 17:35878522:ACTCA:A | donor_loss | 0.9800 |
| 17:35878523:CTCA:C | donor_loss | 0.9800 |
| 17:35878524:T:TT | donor_loss | 0.9800 |
| 17:35878525:CACA:C | donor_loss | 0.9800 |
| 17:35878526:A:C | donor_loss | 0.9800 |
| 17:35878527:CACG:C | donor_gain | 0.9800 |
| 17:35878550:TGCC:T | donor_gain | 0.9800 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000156922 (17:35881789 C>T), RS1000165965 (17:35871362 G>A,C), RS1000599672 (17:35873370 G>A), RS1000709472 (17:35877736 T>A), RS1000762147 (17:35880441 A>C), RS1001317972 (17:35875698 C>T), RS1001601648 (17:35872163 T>A), RS1001652338 (17:35871817 C>A), RS1002168067 (17:35878899 T>C), RS1002285422 (17:35874415 C>T), RS1002439570 (17:35881037 T>C), RS1002724355 (17:35874093 T>G), RS1002754843 (17:35877378 CAAAACA>C,CAAAACAAAAACA), RS1003216859 (17:35876934 T>C), RS1003314215 (17:35881919 C>A,T)
Disease associations
OMIM: gene MIM:187011 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006585_2080 | Blood protein levels | 2.000000e-54 |
| GCST006585_2902 | Blood protein levels | 5.000000e-35 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL1275217 (SINGLE PROTEIN), CHEMBL3885531 (PROTEIN-PROTEIN INTERACTION)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs4796120 | CCL5 | 0.00 | 0 |
ChEMBL bioactivities
30 potent at pChembl≥5 of 30 total, top 30 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.77 | IC50 | 17 | nM | CHEMBL1270493 |
| 7.66 | IC50 | 22 | nM | CHEMBL1270595 |
| 7.64 | IC50 | 23 | nM | CHEMBL1270101 |
| 7.64 | IC50 | 23 | nM | CHEMBL1269384 |
| 7.60 | IC50 | 25 | nM | CHEMBL1270798 |
| 7.60 | IC50 | 25 | nM | CHEMBL1270799 |
| 7.60 | IC50 | 25 | nM | CHEMBL1270901 |
| 7.57 | IC50 | 27 | nM | CHEMBL1270594 |
| 7.57 | IC50 | 27 | nM | CHEMBL1270694 |
| 7.57 | IC50 | 27 | nM | CHEMBL1271108 |
| 7.51 | IC50 | 31 | nM | CHEMBL1271208 |
| 7.50 | IC50 | 32 | nM | CHEMBL1271107 |
| 7.50 | IC50 | 32 | nM | CHEMBL1269885 |
| 7.47 | IC50 | 34 | nM | CHEMBL1270901 |
| 7.46 | IC50 | 35 | nM | CHEMBL1270693 |
| 7.46 | IC50 | 35 | nM | CHEMBL1270401 |
| 7.42 | IC50 | 38 | nM | CHEMBL1269385 |
| 7.41 | IC50 | 39 | nM | CHEMBL1270303 |
| 7.40 | IC50 | 40 | nM | CHEMBL1270209 |
| 7.36 | IC50 | 44 | nM | CHEMBL1269885 |
| 7.33 | IC50 | 47 | nM | CHEMBL1271000 |
| 7.32 | IC50 | 48 | nM | CHEMBL1269383 |
| 7.28 | IC50 | 52 | nM | CHEMBL1270494 |
| 7.17 | IC50 | 68 | nM | CHEMBL1271310 |
| 7.14 | IC50 | 72 | nM | CHEMBL1271207 |
| 6.99 | IC50 | 102 | nM | CHEMBL1270900 |
| 6.98 | IC50 | 104 | nM | CHEMBL1269386 |
| 6.68 | IC50 | 207 | nM | CHEMBL1269884 |
| 6.67 | IC50 | 215 | nM | CHEMBL1269387 |
| 5.24 | Kd | 5720 | nM | CHEMBL5081237 |
PubChem BioAssay actives
30 with measured affinity, of 60 total; 28 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [(3aR,6aS)-2-[3-phenyl-3-[1-(2,2,2-trifluoroethyl)piperidin-4-yl]propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0170 | uM |
| [(3aR,6aS)-2-[3-(1-cyclopentylsulfonylazetidin-3-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0220 | uM |
| [(3aS,6aR)-2-[3-(1-cyclopentylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0230 | uM |
| [(3aR,6aS)-2-[3-phenyl-3-(1-propan-2-ylsulfonylazetidin-3-yl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0230 | uM |
| [(3aR,6aS)-2-[3-[1-(2,2-difluoroethyl)piperidin-4-yl]-3-(3,5-difluorophenyl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0250 | uM |
| [(3aR,6aS)-2-[3-(1-ethylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0250 | uM |
| [(3aR,6aS)-2-[3-(1-methylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0250 | uM |
| [(3aR,6aS)-2-[3-[1-(2,2-difluoroethyl)piperidin-4-yl]-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0270 | uM |
| [(3aR,6aS)-2-[3-(1-cyclopropylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0270 | uM |
| 5-[(3aR,6aS)-2-[3-(1-methylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrole-5-carbonyl]-4,6-dimethylpyran-2-one | 527242: Inhibition of RANTES | ic50 | 0.0270 | uM |
| 5-[(3aR,6aS)-2-[3-(1-methylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrole-5-carbonyl]-4,6-dimethylpyridine-2-carbonitrile | 527242: Inhibition of RANTES | ic50 | 0.0310 | uM |
| [(3aS,6aR)-2-[3-(3-fluorophenyl)-3-(1-methylsulfonylpiperidin-4-yl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0320 | uM |
| 1-[4-[3-[(3aS,6aR)-5-(4,6-dimethylpyrimidine-5-carbonyl)-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl]-1-phenylpropyl]piperidin-1-yl]propan-1-one | 527242: Inhibition of RANTES | ic50 | 0.0320 | uM |
| [(3aS,6aR)-2-[3-[1-(2,2-difluoroethyl)piperidin-4-yl]-3-(3-fluorophenyl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0350 | uM |
| [(3aS,6aR)-2-[3-(1-cyclopropylsulfonylazetidin-3-yl)-3-(3,5-difluorophenyl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0350 | uM |
| [(3aS,6aR)-2-[3-[1-(benzenesulfonyl)piperidin-4-yl]-3-(3-fluorophenyl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0380 | uM |
| [(3aR,6aS)-2-[3-(1-cyclopropylsulfonylazetidin-3-yl)-3-(3-fluorophenyl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0390 | uM |
| [(3aR,6aS)-2-[3-(1-cyclopropylsulfonylazetidin-3-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0400 | uM |
| [(3aR,6aS)-2-[3-phenyl-3-(1-propan-2-ylsulfonylpiperidin-4-yl)propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0470 | uM |
| [(3aS,6aR)-2-[3-phenyl-3-[1-(2,2,2-trifluoroethylsulfonyl)piperidin-4-yl]propyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0480 | uM |
| [(3aS,6aR)-2-[3-(1-methylsulfonylazetidin-3-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(4,6-dimethylpyrimidin-5-yl)methanone | 527242: Inhibition of RANTES | ic50 | 0.0520 | uM |
| 1-[4-[3-[(3aR,6aS)-5-(4,6-dimethylpyrimidine-5-carbonyl)-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl]-1-phenylpropyl]piperidin-1-yl]-3-methylbutan-1-one | 527242: Inhibition of RANTES | ic50 | 0.0680 | uM |
| 1-[4-[3-[(3aS,6aR)-5-(4,6-dimethylpyrimidine-5-carbonyl)-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl]-1-phenylpropyl]piperidin-1-yl]-2-methylpropan-1-one | 527242: Inhibition of RANTES | ic50 | 0.0720 | uM |
| methyl 4-[3-[(3aS,6aR)-5-(4,6-dimethylpyrimidine-5-carbonyl)-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl]-1-phenylpropyl]piperidine-1-carboxylate | 527242: Inhibition of RANTES | ic50 | 0.1020 | uM |
| [(3aS,6aR)-2-[3-(1-methylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-5-yl]-(2-chloro-6-methylphenyl)sulfonylmethanone | 527242: Inhibition of RANTES | ic50 | 0.1040 | uM |
| [3-[3-[(3aS,6aR)-5-(4,6-dimethylpyrimidine-5-carbonyl)-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrol-2-yl]-1-phenylpropyl]azetidin-1-yl]-cyclopentylmethanone | 527242: Inhibition of RANTES | ic50 | 0.2070 | uM |
| 4-[(3aS,6aR)-2-[3-(1-methylsulfonylpiperidin-4-yl)-3-phenylpropyl]-1,3,3a,4,6,6a-hexahydropyrrolo[3,4-c]pyrrole-5-carbonyl]sulfonyl-3-chlorobenzonitrile | 527242: Inhibition of RANTES | ic50 | 0.2150 | uM |
| (2R,3S,4S,5R,6R)-6-[2-(2-aminoethoxy)ethoxy]-3-[(2R,3R,4S,5S,6R)-6-carboxy-5-[(2R,3R,4S,5S,6R)-6-carboxy-5-[(2R,3R,4S,5S,6R)-6-carboxy-4-hydroxy-3,5-disulfooxyoxan-2-yl]oxy-4-hydroxy-3-sulfooxyoxan-2-yl]oxy-4-hydroxy-3-sulfooxyoxan-2-yl]oxy-4-hydroxy-5-sulfooxyoxane-2-carboxylic acid | 1823524: Binding affinity to human CCL5 assessed as dissociation constant incubated for 3 mins by surface plasmon resonance analysis | kd | 5.7200 | uM |
CTD chemical–gene interactions
259 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Lipopolysaccharides | decreases reaction, increases secretion, increases expression, affects cotreatment, increases reaction (+1 more) | 15 |
| Particulate Matter | decreases reaction, increases abundance, affects expression, decreases secretion, increases reaction (+4 more) | 8 |
| Vehicle Emissions | decreases secretion, increases reaction, increases expression, decreases expression, decreases reaction (+2 more) | 7 |
| SB 203580 | increases secretion, affects binding, decreases secretion, decreases reaction, increases expression (+1 more) | 4 |
| Beclomethasone | decreases reaction, increases secretion, decreases expression, affects cotreatment, decreases secretion | 4 |
| Benzo(a)pyrene | increases reaction, increases methylation, affects methylation, increases expression | 4 |
| Silicon Dioxide | increases expression, increases secretion | 4 |
| Tobacco Smoke Pollution | increases expression, increases reaction, decreases expression, increases secretion, decreases reaction | 4 |
| Cadmium Chloride | increases abundance, increases expression, decreases reaction, increases secretion, decreases expression | 4 |
| titanium dioxide | affects binding, increases secretion, increases expression | 3 |
| 2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one | decreases reaction, increases activity, increases expression, affects cotreatment, decreases secretion (+4 more) | 3 |
| Fluticasone | increases expression, increases secretion, decreases reaction | 3 |
| Acetylcysteine | increases expression, decreases reaction, increases secretion | 3 |
| Dust | decreases expression, increases expression, increases secretion | 3 |
| Estradiol | decreases expression, increases expression, affects cotreatment | 3 |
| Glucose | decreases expression, increases expression, affects cotreatment | 3 |
| Methotrexate | decreases expression, increases expression, increases reaction | 3 |
| Poly I-C | affects cotreatment, decreases reaction, increases expression, increases reaction | 3 |
| sodium arsenite | increases expression | 2 |
| perfluorooctanoic acid | decreases expression, increases expression | 2 |
| nickel sulfate | increases secretion, affects expression | 2 |
| Resveratrol | decreases reaction, increases expression | 2 |
| Troglitazone | decreases secretion, increases expression | 2 |
| Terbinafine | increases expression, increases reaction, affects cotreatment, decreases reaction | 2 |
| Air Pollutants | increases secretion, increases abundance, increases expression, affects cotreatment | 2 |
| Benzene | increases expression | 2 |
| Bezafibrate | decreases reaction, increases expression | 2 |
| Cadmium | decreases expression, increases abundance, decreases reaction, increases expression | 2 |
| Copper | increases expression, affects binding, affects cotreatment, increases reaction, increases activity | 2 |
| Cycloheximide | increases expression, increases reaction, decreases reaction | 2 |
ChEMBL screening assays
10 unique, capped per target: 10 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1272914 | Binding | Inhibition of RANTES | Evaluation of amide replacements in CCR5 antagonists as a means to increase intrinsic permeability. Part 2: SAR optimization and pharmacokinetic profile of a homologous azacyle series. — Bioorg Med Chem Lett |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.