CCNH-AS1

Summary

CCNH-AS1 (CCNH antisense RNA 1, HGNC:59091) is a long non-coding RNA gene on chromosome 5q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59091
Approved symbol	CCNH-AS1
Name	CCNH antisense RNA 1
Location	5q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000285190
Ensembl biotype	lncRNA
Entrez	105379066

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000644559, ENST00000797782

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000644559 — 5 exons

Exon	Start	End
ENSE00003821104	87412342	87413061
ENSE00003822916	87497706	87497849
ENSE00003823575	87498466	87499340
ENSE00003826108	87479937	87480013
ENSE00003827076	87483135	87483431

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 76.06.

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.06	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.96	silver quality
bone marrow cell	CL:0002092	65.91	silver quality
cortical plate	UBERON:0005343	64.12	gold quality
ganglionic eminence	UBERON:0004023	61.58	gold quality
ventricular zone	UBERON:0003053	61.04	gold quality
bone marrow	UBERON:0002371	59.48	silver quality
skeletal muscle tissue	UBERON:0001134	58.85	gold quality
stromal cell of endometrium	CL:0002255	57.13	gold quality
hindlimb stylopod muscle	UBERON:0004252	56.29	gold quality
liver	UBERON:0002107	55.61	silver quality
prefrontal cortex	UBERON:0000451	54.63	gold quality
monocyte	CL:0000576	52.89	silver quality
calcaneal tendon	UBERON:0003701	51.89	silver quality
endometrium	UBERON:0001295	51.74	gold quality
muscle of leg	UBERON:0001383	51.14	gold quality
blood	UBERON:0000178	50.85	gold quality
frontal cortex	UBERON:0001870	50.79	gold quality
corpus callosum	UBERON:0002336	50.54	silver quality
gastrocnemius	UBERON:0001388	50.32	gold quality
mucosa of stomach	UBERON:0001199	49.87	gold quality
popliteal artery	UBERON:0002250	49.64	gold quality
tibial artery	UBERON:0007610	49.60	gold quality
Brodmann (1909) area 9	UBERON:0013540	49.52	gold quality
cerebral cortex	UBERON:0000956	49.29	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	49.11	gold quality
primary visual cortex	UBERON:0002436	49.00	silver quality
right lobe of liver	UBERON:0001114	48.70	silver quality
islet of Langerhans	UBERON:0000006	48.64	silver quality
gall bladder	UBERON:0002110	48.56	gold quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-MTAB-9543	yes	24.87
E-ANND-3	no	3.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.