CCNI
gene geneOn this page
Also known as CCNI1
Summary
CCNI (cyclin I, HGNC:1595) is a protein-coding gene on chromosome 4q21.1, encoding Cyclin-I (Q14094).
The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a dramatic periodicity in protein abundance through the cell cycle. Cyclins function as regulators of CDK kinases. Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination of each mitotic event. This cyclin shows the highest similarity with cyclin G. The transcript of this gene was found to be expressed constantly during cell cycle progression.
Source: NCBI Gene 10983 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 45 total
- Druggable target: yes
- MANE Select transcript:
NM_006835
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1595 |
| Approved symbol | CCNI |
| Name | cyclin I |
| Location | 4q21.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CCNI1 |
| Ensembl gene | ENSG00000118816 |
| Ensembl biotype | protein_coding |
| OMIM | 618783 |
| Entrez | 10983 |
Gene structure
Transcript identifiers
Ensembl transcripts: 30 — 26 protein_coding, 2 retained_intron, 1 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay
ENST00000237654, ENST00000504697, ENST00000505609, ENST00000506614, ENST00000507788, ENST00000511943, ENST00000513774, ENST00000515468, ENST00000515790, ENST00000718433, ENST00000887836, ENST00000887837, ENST00000887838, ENST00000887839, ENST00000887840, ENST00000887841, ENST00000887842, ENST00000887843, ENST00000887844, ENST00000912006, ENST00000912007, ENST00000912008, ENST00000912009, ENST00000950255, ENST00000950256, ENST00000950257, ENST00000950258, ENST00000950259, ENST00000950260, ENST00000950261
RefSeq mRNA: 10 — MANE Select: NM_006835
NM_001348132, NM_001348133, NM_001348134, NM_001348135, NM_001348136, NM_001348137, NM_001348138, NM_001348139, NM_001348140, NM_006835
CCDS: CCDS3580
Canonical transcript exons
ENST00000237654 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001077925 | 77047155 | 77048662 |
| ENSE00001077926 | 77075472 | 77075989 |
| ENSE00001077929 | 77055150 | 77055380 |
| ENSE00003481500 | 77058507 | 77058635 |
| ENSE00003579014 | 77056249 | 77056323 |
| ENSE00003683884 | 77055962 | 77056102 |
| ENSE00004035076 | 77066249 | 77066405 |
Expression profiles
Bgee: expression breadth ubiquitous, 308 present calls, max score 99.85.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 195.2465 / max 2235.3759, expressed in 1826 samples.
FANTOM5 promoters (12 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 52688 | 171.4228 | 1826 |
| 52687 | 17.3018 | 1778 |
| 52689 | 1.7090 | 919 |
| 52685 | 1.5138 | 976 |
| 52684 | 0.6379 | 429 |
| 203254 | 0.6333 | 358 |
| 203251 | 0.5354 | 290 |
| 203253 | 0.4785 | 228 |
| 203256 | 0.3585 | 172 |
| 203255 | 0.2918 | 118 |
Top tissues by expression
308 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| paraflocculus | UBERON:0005351 | 99.85 | gold quality |
| cortical plate | UBERON:0005343 | 99.75 | gold quality |
| parotid gland | UBERON:0001831 | 99.71 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.65 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 99.64 | gold quality |
| colonic epithelium | UBERON:0000397 | 99.61 | gold quality |
| postcentral gyrus | UBERON:0002581 | 99.61 | gold quality |
| parietal lobe | UBERON:0001872 | 99.60 | gold quality |
| blood vessel layer | UBERON:0004797 | 99.60 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 99.57 | gold quality |
| caput epididymis | UBERON:0004358 | 99.55 | gold quality |
| superficial temporal artery | UBERON:0001614 | 99.51 | gold quality |
| cauda epididymis | UBERON:0004360 | 99.51 | gold quality |
| nipple | UBERON:0002030 | 99.50 | gold quality |
| cardia of stomach | UBERON:0001162 | 99.48 | gold quality |
| endometrium epithelium | UBERON:0004811 | 99.48 | gold quality |
| cartilage tissue | UBERON:0002418 | 99.47 | gold quality |
| adult organism | UBERON:0007023 | 99.47 | gold quality |
| urethra | UBERON:0000057 | 99.46 | gold quality |
| pons | UBERON:0000988 | 99.45 | gold quality |
| corpus epididymis | UBERON:0004359 | 99.44 | gold quality |
| ventricular zone | UBERON:0003053 | 99.43 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 99.43 | gold quality |
| oocyte | CL:0000023 | 99.39 | gold quality |
| pylorus | UBERON:0001166 | 99.39 | gold quality |
| type B pancreatic cell | CL:0000169 | 99.35 | gold quality |
| mammalian vulva | UBERON:0000997 | 99.35 | gold quality |
| mammary duct | UBERON:0001765 | 99.35 | gold quality |
| frontal pole | UBERON:0002795 | 99.33 | gold quality |
| pericardium | UBERON:0002407 | 99.32 | gold quality |
Single-cell (SCXA)
Detected in 25 experiment(s), a significant marker in 13.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-7316 | yes | 3076.73 |
| E-GEOD-124263 | yes | 2601.83 |
| E-GEOD-137537 | yes | 2229.12 |
| E-HCAD-4 | yes | 95.81 |
| E-HCAD-11 | yes | 51.68 |
| E-CURD-88 | yes | 33.09 |
| E-CURD-122 | yes | 32.21 |
| E-GEOD-134144 | yes | 31.76 |
| E-MTAB-9543 | yes | 20.78 |
| E-CURD-112 | yes | 11.14 |
| E-MTAB-10042 | yes | 10.07 |
| E-GEOD-125970 | yes | 7.38 |
| E-MTAB-7249 | no | 6912.64 |
| E-MTAB-9154 | no | 2941.00 |
| E-MTAB-10485 | no | 2324.38 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
19 targeting CCNI, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-9983-3P | 99.94 | 71.48 | 3631 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
| HSA-MIR-3680-3P | 99.75 | 72.51 | 3095 |
| HSA-MIR-4719 | 99.73 | 72.10 | 3329 |
| HSA-MIR-4804-3P | 99.65 | 67.78 | 866 |
| HSA-MIR-7156-5P | 99.64 | 68.81 | 1369 |
| HSA-MIR-7152-5P | 99.60 | 69.33 | 2094 |
| HSA-MIR-6758-3P | 99.57 | 67.55 | 1078 |
| HSA-MIR-186-3P | 99.51 | 66.24 | 1685 |
| HSA-MIR-4273 | 99.45 | 67.93 | 1206 |
| HSA-MIR-4284 | 99.36 | 65.25 | 1293 |
| HSA-MIR-133A-3P | 99.27 | 71.53 | 1270 |
| HSA-MIR-133B | 99.27 | 71.53 | 1270 |
| HSA-MIR-149-5P | 99.25 | 67.16 | 1315 |
| HSA-MIR-449B-3P | 99.20 | 67.24 | 1047 |
| HSA-MIR-3074-5P | 98.82 | 66.56 | 1414 |
| HSA-MIR-4680-3P | 98.64 | 68.60 | 2093 |
| HSA-MIR-4720-3P | 98.50 | 68.88 | 988 |
| HSA-MIR-4662A-5P | 98.48 | 67.18 | 1007 |
Literature-anchored findings (GeneRIF, showing 4)
- The increased levels of cyclin I and GDI2 found to be associated with pancreatic carcinoma were further confirmed by Western blot analyses in an independent series of serum samples and/or pancreatic juice samples (PMID:17507299)
- Knockdown of Cyclin I induced cell cycle arrest at S/G2/M phases. (PMID:23907122)
- A cyclin I-Cdk5 complex forms a critical antiapoptotic factor in the process of generating cisplatin resistance in cervical cancer. (PMID:26698249)
- CDK6 is activated by the atypical cyclin I to promote E2F-mediated gene expression and cancer cell proliferation. (PMID:37081792)
Cross-species orthologs
11 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ccni | ENSDARG00000068214 |
| mus_musculus | Ccni | ENSMUSG00000063015 |
| rattus_norvegicus | Ccni | ENSRNOG00000002125 |
| drosophila_melanogaster | CycB | FBGN0000405 |
| drosophila_melanogaster | CycD | FBGN0010315 |
| drosophila_melanogaster | CycE | FBGN0010382 |
| caenorhabditis_elegans | WBGENE00000865 | |
| caenorhabditis_elegans | WBGENE00000866 | |
| caenorhabditis_elegans | cyb-2.2 | WBGENE00000867 |
| caenorhabditis_elegans | WBGENE00000870 | |
| caenorhabditis_elegans | cye-1 | WBGENE00000871 |
Paralogs (18): CCNE1 (ENSG00000105173), CCNP (ENSG00000105219), CCNJ (ENSG00000107443), CCND1 (ENSG00000110092), CCND3 (ENSG00000112576), CCNG1 (ENSG00000113328), CCND2 (ENSG00000118971), CCNA1 (ENSG00000133101), CCNB1 (ENSG00000134057), CCNJL (ENSG00000135083), CCNG2 (ENSG00000138764), CCNA2 (ENSG00000145386), CCNB3 (ENSG00000147082), CCNO (ENSG00000152669), CCNB2 (ENSG00000157456), CCNF (ENSG00000162063), CCNE2 (ENSG00000175305), CCNI2 (ENSG00000205089)
Protein
Protein identifiers
Cyclin-I — Q14094 (reviewed: Q14094)
All UniProt accessions (6): Q14094, D6RDK3, D6REZ3, D6RG12, D6RH01, H0YA27
UniProt curated annotations — full annotation on UniProt →
Subcellular location. Nucleus membrane.
Tissue specificity. Highest levels in adult heart, brain and skeletal muscle. Lower levels in adult placenta, lung, kidney and pancreas. Also high levels in fetal brain and lower levels in fetal lung, liver and kidney. Also abundant in testis and thyroid.
Similarity. Belongs to the cyclin family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q14094-1 | 1 | yes |
| Q14094-2 | 2 |
RefSeq proteins (10): NP_001335061, NP_001335062, NP_001335063, NP_001335064, NP_001335065, NP_001335066, NP_001335067, NP_001335068, NP_001335069, NP_006826* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR006671 | Cyclin_N | Domain |
| IPR013763 | Cyclin-like_dom | Domain |
| IPR036915 | Cyclin-like_sf | Homologous_superfamily |
| IPR039361 | Cyclin | Family |
Pfam: PF00134
UniProt features (8 total): sequence conflict 3, chain 1, region of interest 1, compositionally biased region 1, splice variant 1, sequence variant 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q14094-F1 | 72.93 | 0.46 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 266 (showing top):
GSE45365_NK_CELL_VS_CD11B_DC_UP, PAX4_01, TGCGCANK_UNKNOWN, ENK_UV_RESPONSE_KERATINOCYTE_UP, GOBP_CELL_CYCLE_PHASE_TRANSITION, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, MORF_HDAC1, HSIAO_HOUSEKEEPING_GENES, DARWICHE_SKIN_TUMOR_PROMOTER_DN, DARWICHE_PAPILLOMA_RISK_LOW_DN, DARWICHE_PAPILLOMA_RISK_HIGH_DN, DARWICHE_SQUAMOUS_CELL_CARCINOMA_DN, GOBP_MALE_GAMETE_GENERATION, WOO_LIVER_CANCER_RECURRENCE_UP, RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP
GO Biological Process (2): G1/S transition of mitotic cell cycle (GO:0000082), spermatogenesis (GO:0007283)
GO Molecular Function (2): cyclin-dependent protein serine/threonine kinase regulator activity (GO:0016538), protein binding (GO:0005515)
GO Cellular Component (5): cyclin-dependent protein kinase holoenzyme complex (GO:0000307), nucleus (GO:0005634), cytoplasm (GO:0005737), nuclear membrane (GO:0031965), membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| mitotic cell cycle | 1 |
| mitotic cell cycle phase transition | 1 |
| cell cycle G1/S phase transition | 1 |
| developmental process involved in reproduction | 1 |
| male gamete generation | 1 |
| cyclin-dependent protein serine/threonine kinase activity | 1 |
| cyclin-dependent protein kinase regulator activity | 1 |
| binding | 1 |
| serine/threonine protein kinase complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
| nucleus | 1 |
| nuclear envelope | 1 |
| organelle membrane | 1 |
Protein interactions and networks
STRING
1826 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CCNI | AZIN1 | O14977 | 580 |
| CCNI | CDK5 | Q00535 | 571 |
| CCNI | GRIA2 | P42262 | 461 |
| CCNI | GREB1 | Q4ZG55 | 461 |
| CCNI | NEIL1 | Q96FI4 | 455 |
| CCNI | CCNL2 | Q96S94 | 439 |
| CCNI | CYFIP2 | Q96F07 | 424 |
| CCNI | VCY | O14598 | 418 |
| CCNI | TOR1B | O14657 | 418 |
| CCNI | FRS2 | Q8WU20 | 398 |
| CCNI | IGFBP7 | Q16270 | 385 |
| CCNI | EPB41L5 | Q9HCM4 | 385 |
| CCNI | KCNA1 | Q09470 | 379 |
| CCNI | TMEM63B | Q5T3F8 | 378 |
| CCNI | GRIA3 | P42263 | 374 |
IntAct
24 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CDK5 | FIBP | psi-mi:“MI:0914”(association) | 0.840 |
| CDK5 | CCNI | psi-mi:“MI:0915”(physical association) | 0.750 |
| CCNI | CDK5 | psi-mi:“MI:0915”(physical association) | 0.750 |
| CDK3 | CCNI | psi-mi:“MI:0915”(physical association) | 0.560 |
| CCNI | ZMYND19 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDK6 | CCNI | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDK16 | CCNI | psi-mi:“MI:0915”(physical association) | 0.370 |
| CDC25A | CCNI | psi-mi:“MI:0915”(physical association) | 0.370 |
| CCNI | IL1RAP | psi-mi:“MI:0915”(physical association) | 0.370 |
| CCNI | KRT18 | psi-mi:“MI:0915”(physical association) | 0.370 |
| AKT1 | CCNI | psi-mi:“MI:0915”(physical association) | 0.370 |
| CCNI | CEP63 | psi-mi:“MI:0915”(physical association) | 0.000 |
| CEP63 | CCNI | psi-mi:“MI:0915”(physical association) | 0.000 |
| CCNI | CDK6 | psi-mi:“MI:0915”(physical association) | 0.000 |
| CCNI | ZMYND19 | psi-mi:“MI:0915”(physical association) | 0.000 |
| cya | CCNI | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (22): CCNI (Affinity Capture-RNA), CCNI (Affinity Capture-MS), CCNI (Two-hybrid), CCNI (Two-hybrid), CCNI (Two-hybrid), CDK5 (Two-hybrid), ZMYND19 (Two-hybrid), CDK3 (Two-hybrid), CCNI (Two-hybrid), CCNI (Affinity Capture-RNA), CDK5 (Affinity Capture-MS), CCNI (Negative Genetic), CCNI (Affinity Capture-MS), CCNI (Affinity Capture-MS), CCNI (Affinity Capture-MS)
ESM2 similar proteins: A0A494C0Z2, A0A494C191, A1L3C1, A2RRU4, A4Q9F3, A6NJR5, A6NLX3, A6NNV3, A6QM06, A6QNT4, D4A6L0, E1BBQ2, E9PGG2, O00255, O60320, O88559, P0DTA3, P0DUD1, P0DUD2, P0DUD3, P0DUD4, P0DUX0, P0DUX1, P0DV79, P29590, P40338, P56726, P97260, Q0P5I0, Q12770, Q14094, Q32L49, Q495Y7, Q5IBH6, Q5MJ68, Q5MNU5, Q5Q9Z2, Q5RDC3, Q5T848, Q69Z89
Diamond homologs: O08918, P13351, P24868, P24869, P25011, P25012, P25322, P30183, P30278, P30279, P30280, P39950, P46277, P46278, P51945, P51959, Q04827, Q0JIF2, Q0P5D3, Q14094, Q16589, Q39068, Q39069, Q52QT8, Q5E9I1, Q5R5D0, Q61456, Q6AY13, Q6ZMN8, Q8WNW2, Q92161, Q95TJ9, Q9Z2V9, O01501, O15995, O42575, O48790, O96020, P04962, P0C242
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 12 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| cell division | 5 | 23.1× | 3e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
45 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 31 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
933 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:77055960:A:AC | donor_gain | 1.0000 |
| 4:77055961:C:CC | donor_gain | 1.0000 |
| 4:77058632:CATT:C | acceptor_gain | 1.0000 |
| 4:77066243:CATTA:C | donor_loss | 1.0000 |
| 4:77066244:ATTAC:A | donor_loss | 1.0000 |
| 4:77066245:TTAC:T | donor_loss | 1.0000 |
| 4:77066246:TACCT:T | donor_loss | 1.0000 |
| 4:77066406:CT:C | acceptor_loss | 1.0000 |
| 4:77075485:T:TA | donor_gain | 1.0000 |
| 4:77048669:C:CT | acceptor_gain | 0.9900 |
| 4:77048670:A:T | acceptor_gain | 0.9900 |
| 4:77055376:TGGAA:T | acceptor_gain | 0.9900 |
| 4:77055381:C:CC | acceptor_gain | 0.9900 |
| 4:77055948:T:TA | donor_gain | 0.9900 |
| 4:77056013:AT:A | donor_gain | 0.9900 |
| 4:77056014:T:C | donor_gain | 0.9900 |
| 4:77056321:AGCC:A | acceptor_loss | 0.9900 |
| 4:77056322:GCC:G | acceptor_loss | 0.9900 |
| 4:77056323:CCTAA:C | acceptor_loss | 0.9900 |
| 4:77056324:CTAAA:C | acceptor_loss | 0.9900 |
| 4:77056325:T:G | acceptor_loss | 0.9900 |
| 4:77058500:CACTT:C | donor_loss | 0.9900 |
| 4:77058501:ACTT:A | donor_loss | 0.9900 |
| 4:77058502:CTTAC:C | donor_loss | 0.9900 |
| 4:77058503:TTACC:T | donor_loss | 0.9900 |
| 4:77058504:TAC:T | donor_loss | 0.9900 |
| 4:77058634:TT:T | acceptor_gain | 0.9900 |
| 4:77058634:TTC:T | acceptor_loss | 0.9900 |
| 4:77058635:TCT:T | acceptor_loss | 0.9900 |
| 4:77058636:C:CC | acceptor_gain | 0.9900 |
AlphaMissense
2483 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:77056017:A:G | L135P | 1.000 |
| 4:77056029:T:A | E131V | 1.000 |
| 4:77056031:C:A | M130I | 1.000 |
| 4:77056031:C:G | M130I | 1.000 |
| 4:77056031:C:T | M130I | 1.000 |
| 4:77056267:C:A | K100N | 1.000 |
| 4:77056267:C:G | K100N | 1.000 |
| 4:77056285:A:C | C94W | 1.000 |
| 4:77048634:C:G | R240P | 0.999 |
| 4:77055216:A:C | S208R | 0.999 |
| 4:77055216:A:T | S208R | 0.999 |
| 4:77055218:T:G | S208R | 0.999 |
| 4:77056001:C:A | W140C | 0.999 |
| 4:77056001:C:G | W140C | 0.999 |
| 4:77056003:A:G | W140R | 0.999 |
| 4:77056003:A:T | W140R | 0.999 |
| 4:77056028:C:A | E131D | 0.999 |
| 4:77056028:C:G | E131D | 0.999 |
| 4:77056032:A:C | M130R | 0.999 |
| 4:77056034:T:A | R129S | 0.999 |
| 4:77056034:T:G | R129S | 0.999 |
| 4:77056035:C:A | R129I | 0.999 |
| 4:77056035:C:G | R129T | 0.999 |
| 4:77056274:G:T | A98D | 0.999 |
| 4:77056275:C:G | A98P | 0.999 |
| 4:77056286:C:T | C94Y | 0.999 |
| 4:77056287:A:G | C94R | 0.999 |
| 4:77056288:G:C | S93R | 0.999 |
| 4:77056288:G:T | S93R | 0.999 |
| 4:77056290:T:G | S93R | 0.999 |
dbSNP variants (sampled 300 via entrez): RS10000115 (4:77069590 T>C,G), RS1000044096 (4:77066034 G>A), RS1000098133 (4:77050681 T>C,G), RS1000136644 (4:77075572 T>A,C,G), RS1000213747 (4:77069080 T>C), RS1000218805 (4:77049526 A>G), RS1000299061 (4:77075478 C>CTCCTCT), RS1000339970 (4:77056992 T>C), RS1000415647 (4:77059936 TCAA>T), RS1000564268 (4:77066007 G>A), RS10005701 (4:77063615 G>A,C,T), RS10006033 (4:77047041 T>C), RS1000904606 (4:77074719 T>A,C), RS1000954554 (4:77067813 A>G), RS1000960844 (4:77072824 G>A)
Disease associations
OMIM: gene MIM:618783 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6067138 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
1 potent at pChembl≥5 of 2 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 5.01 | Kd | 9830 | nM | CHEMBL3752910 |
PubChem BioAssay actives
1 with measured affinity, of 2 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148016: Binding affinity to human CCNI incubated for 45 mins by Kinobead based pull down assay | kd | 9.8301 | uM |
CTD chemical–gene interactions
38 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, decreases methylation, affects cotreatment, decreases expression | 5 |
| bisphenol A | affects expression, increases expression, affects cotreatment, decreases expression | 4 |
| sodium arsenite | decreases expression, increases expression | 2 |
| cobaltous chloride | decreases expression, increases expression | 2 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation, increases expression | 2 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | affects expression, decreases expression | 2 |
| Cyclosporine | increases expression | 2 |
| Particulate Matter | increases abundance, increases expression | 2 |
| GSK-J4 | increases expression | 1 |
| bisphenol F | affects cotreatment, decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| glycidamide | increases expression | 1 |
| chloropicrin | affects expression | 1 |
| K 7174 | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| ICG 001 | increases expression | 1 |
| dorsomorphin | decreases expression, affects cotreatment | 1 |
| bisphenol S | affects cotreatment, decreases expression | 1 |
| 3-hydroxy-4-prenyl-5-methoxystilbene-2-carboxylic acid | decreases expression | 1 |
| Sunitinib | increases expression | 1 |
| Vorinostat | decreases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Coumestrol | decreases expression | 1 |
| Dexamethasone | decreases expression, affects cotreatment | 1 |
| Doxorubicin | decreases expression | 1 |
| Dust | decreases expression | 1 |
| Estradiol | affects expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5651058 | Binding | Binding affinity to human CCNI incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
1 cell lines: 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2TN | Abcam HEK293T CCNI KO | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.