CCR5
gene geneOn this page
Also known as CKR-5CC-CKR-5CKR5CD195IDDM22
Summary
CCR5 (C-C motif chemokine receptor 5, HGNC:1606) is a protein-coding gene on chromosome 3p21.31, encoding C-C chemokine receptor type 5 (P51681). Receptor for a number of inflammatory CC-chemokines including CCL3/MIP-1-alpha, CCL4/MIP-1-beta and RANTES and subsequently transduces a signal by increasing the intracellular calcium ion level.
This gene encodes a member of the beta chemokine receptor family, which is predicted to be a seven transmembrane protein similar to G protein-coupled receptors. This protein is expressed by T cells and macrophages, and is known to be an important co-receptor for macrophage-tropic virus, including HIV, to enter host cells. Defective alleles of this gene have been associated with the HIV infection resistance. The ligands of this receptor include monocyte chemoattractant protein 2 (MCP-2), macrophage inflammatory protein 1 alpha (MIP-1 alpha), macrophage inflammatory protein 1 beta (MIP-1 beta) and regulated on activation normal T expressed and secreted protein (RANTES). Expression of this gene was also detected in a promyeloblastic cell line, suggesting that this protein may play a role in granulocyte lineage proliferation and differentiation. This gene is located at the chemokine receptor gene cluster region. An allelic polymorphism in this gene results in both functional and non-functional alleles; the reference genome represents the functional allele. Two transcript variants encoding the same protein have been found for this gene.
Source: NCBI Gene 1234 — RefSeq curated summary.
At a glance
- GWAS associations: 9
- Clinical variants (ClinVar): 46 total
- GTEx eGene: eQTL in 16 tissues, sQTL in 0 (q < 0.05)
- Drug target: yes — 12 curated mechanism-of-action drugs; 15 molecules with ChEMBL bioactivity (top 2% of genes corpus-wide)
- Approved drugs (ChEMBL mechanism of action): 1 — Maraviroc
- Constraint (gnomAD): pLI 0.18 (intermediate), LOEUF 1.59 (unconstrained)
- MANE Select transcript:
NM_001394783 - Interaction hub: 3,150 STRING partners (top 2% of genes corpus-wide)
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1606 |
| Approved symbol | CCR5 |
| Name | C-C motif chemokine receptor 5 |
| Location | 3p21.31 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CKR-5, CC-CKR-5, CKR5, CD195, IDDM22 |
| Ensembl gene | ENSG00000160791 |
| Ensembl biotype | protein_coding |
| OMIM | 601373 |
| Entrez | 1234 |
Gene structure
Transcript identifiers
Ensembl transcripts: 3 — 3 protein_coding
MANE Select: ENST00000292303
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1
ENST00000292303, ENST00000445772, ENST00001142998
RefSeq mRNA: 3 — MANE Select: NM_001394783
NM_000579, NM_001100168, NM_001394783
CCDS: CCDS2739
Canonical transcript exons
ENST00000292303 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001054508 | 46372892 | 46376206 |
| ENSE00001078626 | 46370946 | 46370988 |
Expression profiles
Bgee: expression breadth ubiquitous, 194 present calls, max score 89.38.
FANTOM5 (CAGE): breadth broad, TPM avg 6.3603 / max 277.3082, expressed in 355 samples.
Highest expression (Bgee): type B pancreatic cell, olfactory bulb, epithelium of nasopharynx, nasopharynx, diaphragm.
Genetic regulation across tissues (GTEx eQTL / sQTL)
CCR5 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 16 tissues and its splicing (sQTL) in 0 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
16 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Whole Blood | eqtl | 2.0e-08 | -0.24 | 3:46318831:T:C |
| Colon Sigmoid | eqtl | 5.8e-04 | -0.40 | 3:46154389:A:G |
| Skin Sun Exposed Lower leg | eqtl | 8.4e-04 | +0.17 | 3:46235387:T:A |
| Lung | eqtl | 9.1e-04 | -0.15 | 3:46439310:A:G |
| Brain Hippocampus | eqtl | 3.4e-03 | -0.26 | 3:46369003:A:C |
| Adipose Visceral Omentum | eqtl | 6.4e-03 | -0.17 | 3:46304382:C:G |
| Prostate | eqtl | 1.4e-02 | +0.23 | 3:46309225:T:C |
| Stomach | eqtl | 1.5e-02 | -0.24 | 3:46098510:A:G |
| Nerve Tibial | eqtl | 1.7e-02 | -0.12 | 3:46406413:G:A |
| Adipose Subcutaneous | eqtl | 2.4e-02 | -0.20 | 3:46220620:C:T |
| Brain Nucleus accumbens basal ganglia | eqtl | 2.6e-02 | +0.20 | 3:46418602:C:T |
| Brain Substantia nigra | eqtl | 2.8e-02 | -0.23 | 3:46408579:T:A |
| Breast Mammary Tissue | eqtl | 2.9e-02 | -0.16 | 3:46417999:C:T |
| Skin Not Sun Exposed Suprapubic | eqtl | 3.7e-02 | +0.15 | 3:46247622:G:A |
| Esophagus Muscularis | eqtl | 3.9e-02 | -0.21 | 3:46175405:G:C |
| Esophagus Mucosa | eqtl | 4.2e-02 | -0.29 | 3:46747140:A:C |
FANTOM5 promoters
2 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 36451 | 4.6010 | 327 |
| 36450 | 1.7592 | 253 |
Top tissues by expression
showing 100 of 282 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| type B pancreatic cell | CL:0000169 | 89.38 | gold quality |
| olfactory bulb | UBERON:0002264 | 89.07 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 87.90 | gold quality |
| nasopharynx | UBERON:0001728 | 87.89 | gold quality |
| diaphragm | UBERON:0001103 | 87.25 | gold quality |
| parietal pleura | UBERON:0002400 | 85.81 | gold quality |
| pleura | UBERON:0000977 | 85.74 | gold quality |
| visceral pleura | UBERON:0002401 | 85.28 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 84.50 | gold quality |
| granulocyte | CL:0000094 | 84.48 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 83.66 | gold quality |
| mucosa of urinary bladder | UBERON:0001259 | 83.58 | silver quality |
| vermiform appendix | UBERON:0001154 | 83.43 | gold quality |
| superficial temporal artery | UBERON:0001614 | 82.00 | gold quality |
| jejunal mucosa | UBERON:0000399 | 81.66 | gold quality |
| lymph node | UBERON:0000029 | 81.43 | gold quality |
| leukocyte | CL:0000738 | 80.23 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 80.17 | gold quality |
| caecum | UBERON:0001153 | 79.85 | gold quality |
| decidua | UBERON:0002450 | 79.82 | gold quality |
| mononuclear cell | CL:0000842 | 79.54 | gold quality |
| monocyte | CL:0000576 | 79.25 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 78.61 | silver quality |
| amniotic fluid | UBERON:0000173 | 78.58 | gold quality |
| oral cavity | UBERON:0000167 | 78.45 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 78.31 | gold quality |
| blood | UBERON:0000178 | 78.19 | gold quality |
| eye | UBERON:0000970 | 77.96 | gold quality |
| myocardium | UBERON:0002349 | 77.27 | gold quality |
| colonic epithelium | UBERON:0000397 | 76.61 | gold quality |
| gall bladder | UBERON:0002110 | 75.21 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 74.96 | gold quality |
| spleen | UBERON:0002106 | 74.38 | gold quality |
| ileal mucosa | UBERON:0000331 | 74.07 | silver quality |
| thymus | UBERON:0002370 | 73.93 | silver quality |
| squamous epithelium | UBERON:0006914 | 73.58 | silver quality |
| mucosa of sigmoid colon | UBERON:0004993 | 73.14 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 72.95 | gold quality |
| duodenum | UBERON:0002114 | 72.73 | gold quality |
| rectum | UBERON:0001052 | 72.61 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 72.03 | silver quality |
| jejunum | UBERON:0002115 | 71.81 | gold quality |
| colonic mucosa | UBERON:0000317 | 71.71 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 71.44 | silver quality |
| bone marrow cell | CL:0002092 | 71.29 | silver quality |
| gingiva | UBERON:0001828 | 70.91 | silver quality |
| gingival epithelium | UBERON:0001949 | 70.75 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 70.18 | gold quality |
| tonsil | UBERON:0002372 | 70.00 | gold quality |
| bone marrow | UBERON:0002371 | 69.82 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 69.50 | silver quality |
| cardia of stomach | UBERON:0001162 | 69.48 | gold quality |
| vastus lateralis | UBERON:0001379 | 69.20 | gold quality |
| lung | UBERON:0002048 | 69.07 | gold quality |
| mammary duct | UBERON:0001765 | 68.90 | silver quality |
| quadriceps femoris | UBERON:0001377 | 68.74 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 68.62 | silver quality |
| bronchus | UBERON:0002185 | 68.46 | silver quality |
| epithelium of mammary gland | UBERON:0003244 | 68.46 | silver quality |
| mammalian vulva | UBERON:0000997 | 67.81 | gold quality |
| tibia | UBERON:0000979 | 67.69 | silver quality |
| cervix epithelium | UBERON:0004801 | 67.69 | silver quality |
| right coronary artery | UBERON:0001625 | 67.52 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 67.36 | gold quality |
| urinary bladder | UBERON:0001255 | 67.07 | gold quality |
| bronchial epithelial cell | CL:0002328 | 66.48 | silver quality |
| small intestine | UBERON:0002108 | 66.24 | gold quality |
| upper lobe of lung | UBERON:0008948 | 65.78 | gold quality |
| trachea | UBERON:0003126 | 65.74 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 65.73 | gold quality |
| skin of hip | UBERON:0001554 | 65.43 | silver quality |
| small intestine Peyer’s patch | UBERON:0003454 | 65.35 | gold quality |
| endometrium | UBERON:0001295 | 65.24 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 65.04 | silver quality |
| pylorus | UBERON:0001166 | 64.98 | gold quality |
| thoracic mammary gland | UBERON:0005200 | 64.96 | gold quality |
| mammary gland | UBERON:0001911 | 64.88 | gold quality |
| nephron tubule | UBERON:0001231 | 64.58 | gold quality |
| caput epididymis | UBERON:0004358 | 64.39 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 64.31 | gold quality |
| cauda epididymis | UBERON:0004360 | 64.24 | silver quality |
| CA1 field of hippocampus | UBERON:0003881 | 64.12 | gold quality |
| corpus epididymis | UBERON:0004359 | 64.12 | silver quality |
| trabecular bone tissue | UBERON:0002483 | 63.81 | silver quality |
| tongue | UBERON:0001723 | 63.53 | silver quality |
| hair follicle | UBERON:0002073 | 63.49 | gold quality |
| metanephric glomerulus | UBERON:0004736 | 63.44 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 63.37 | silver quality |
| body of tongue | UBERON:0011876 | 63.37 | gold quality |
| superior surface of tongue | UBERON:0007371 | 63.35 | silver quality |
| cranial nerve II | UBERON:0000941 | 63.32 | silver quality |
| nasal cavity mucosa | UBERON:0001826 | 63.31 | gold quality |
| kidney epithelium | UBERON:0004819 | 63.21 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 63.20 | gold quality |
| placenta | UBERON:0001987 | 63.08 | gold quality |
| saphenous vein | UBERON:0007318 | 62.97 | gold quality |
| fallopian tube | UBERON:0003889 | 62.78 | gold quality |
| ventral tegmental area | UBERON:0002691 | 62.74 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 62.54 | gold quality |
| gluteal muscle | UBERON:0002000 | 62.48 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.72 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 73 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM |
|---|---|---|
| Appendix | tissue | 14.5 |
| Lymph node | tissue | 13.8 |
| Spinal cord | tissue | 13.4 |
| Substantia nigra | tissue | 12.5 |
| Hypothalamus | tissue | 11.6 |
| Medulla oblongata | tissue | 11.1 |
| Periaqueductal gray | tissue | 11.1 |
| Corpus callosum | tissue | 11.0 |
| Midbrain | tissue | 10.0 |
| Pons | tissue | 9.7 |
| Septum | tissue | 9.4 |
| Spleen | tissue | 9.1 |
| Tonsil | tissue | 9.1 |
| Thalamus | tissue | 8.3 |
| Putamen | tissue | 7.8 |
| Superior colliculi | tissue | 7.6 |
| Lung | tissue | 7.1 |
| Ventral pallidum | tissue | 6.9 |
| Stomach 1 | tissue | 6.6 |
| Amygdala | tissue | 6.5 |
| Hippocampal formation | tissue | 6.5 |
| Small intestine | tissue | 5.7 |
| Basal ganglia | tissue | 5.2 |
| Gallbladder | tissue | 4.8 |
| Urinary bladder | tissue | 4.6 |
| Entorhinal cortex | tissue | 4.4 |
| Olfactory bulb | tissue | 4.2 |
| Cerebral cortex | tissue | 4.0 |
| Motor cortex | tissue | 4.0 |
| Duodenum | tissue | 4.0 |
| Thymus | tissue | 4.0 |
| Temporal cortex | tissue | 3.9 |
| Prefrontal cortex | tissue | 3.8 |
| Rectum | tissue | 3.8 |
| Insular cortex | tissue | 3.7 |
| Retrosplenial cortex | tissue | 3.6 |
| Colon | tissue | 3.2 |
| Liver | tissue | 3.2 |
| Smooth muscle | tissue | 3.1 |
| Cingulate cortex | tissue | 3.1 |
| Somatosensory cortex | tissue | 3.0 |
| Occipital cortex | tissue | 2.9 |
| Salivary gland | tissue | 2.8 |
| Breast | tissue | 2.4 |
| Cervix | tissue | 2.0 |
| Adrenal gland | tissue | 1.9 |
| Choroid plexus | tissue | 1.8 |
| Prostate | tissue | 1.8 |
| Adipose tissue | tissue | 1.7 |
| Fallopian tube | tissue | 1.6 |
| Esophagus | tissue | 1.4 |
| Endometrium 1 | tissue | 1.4 |
| Bone marrow | tissue | 1.3 |
| Cerebellum | tissue | 1.2 |
| Skin 1 | tissue | 1.1 |
| Heart muscle | tissue | 1.0 |
| Seminal vesicle | tissue | 1.0 |
| Kidney | tissue | 1.0 |
| Ovary | tissue | 0.9 |
| Epididymis | tissue | 0.9 |
Brain sub-regions (HPA Brain Atlas): detected in 183; highest nTPM — Dorsal spinal cord (13.4), Ventral spinal cord (12.4), White matter (11.0), Dorsal hippocampus (6.5), Subiculum (5.9).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, CEBPB, CREB1, EGR1, FOS, GATA1, GATA3, HAND1, IRF1, JUN, KLF2, MYC, NFKB1, NR3C2, POU2F2, RELA, STAT1, STAT3, TRERF1, YY1
miRNA regulators (miRDB)
Targeting CCR5 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 65 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5193 | 100.00 | 67.26 | 1744 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-6793-5P | 99.97 | 65.95 | 758 |
| HSA-MIR-1229-3P | 99.97 | 66.49 | 906 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-MIR-4778-3P | 99.93 | 70.40 | 1818 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-345-3P | 99.89 | 70.23 | 1421 |
| HSA-MIR-629-3P | 99.85 | 67.99 | 1875 |
| HSA-MIR-636 | 99.80 | 69.58 | 1500 |
| HSA-MIR-6817-3P | 99.79 | 68.35 | 2126 |
| HSA-MIR-4694-3P | 99.79 | 69.53 | 2640 |
| HSA-MIR-4713-5P | 99.78 | 67.80 | 1794 |
| HSA-MIR-498-5P | 99.76 | 69.64 | 1807 |
| HSA-MIR-4319 | 99.76 | 69.83 | 2586 |
| HSA-MIR-8084 | 99.73 | 69.57 | 1760 |
| HSA-MIR-4524A-3P | 99.72 | 66.85 | 2406 |
| HSA-MIR-670-5P | 99.67 | 69.94 | 1565 |
| HSA-MIR-3175 | 99.65 | 66.30 | 2031 |
| HSA-MIR-182-3P | 99.57 | 67.57 | 825 |
| HSA-MIR-4276 | 99.56 | 67.66 | 2514 |
| HSA-MIR-12123 | 99.52 | 71.79 | 2990 |
| HSA-MIR-5007-3P | 99.51 | 68.14 | 1242 |
| HSA-MIR-203A-3P | 99.49 | 70.56 | 2806 |
| HSA-MIR-125B-5P | 99.36 | 70.36 | 1662 |
| HSA-MIR-125A-5P | 99.36 | 70.59 | 1640 |
| HSA-MIR-4312 | 99.34 | 67.30 | 511 |
| HSA-MIR-7515 | 99.31 | 68.22 | 1795 |
| HSA-MIR-6731-5P | 99.28 | 67.42 | 2375 |
Functional genomics
gnomAD constraint: pLI 0.181, LOEUF 1.59, missense Z -0.388 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000292303 — one region, missense o/e 1.10.
Literature-anchored findings (GeneRIF, showing 40)
- Biological characterization and chemokine receptor usage of HIV type 1 isolates prevalent in Brazil. (PMID:11559423)
- differences in primary structural requirements for RANTES, MIP-1 alpha, and vMIP-II binding (PMID:11700073)
- Association of CCR5 genotype with disease progression of HIV infection (PMID:11709782)
- Effect of cocaine on chemokine and CCR-5 gene expression by mononuclear cells from normal donors and HIV-1 infected patients. (PMID:11727771)
- Up-regulation on distinct subpopulations of antigen-activated CD4+ T lymphocytes (PMID:11751947)
- genotypes and their relative contribution to human immunodeficiency virus type 1 (HIV-1) seroconversion, early HIV-1 RNA concentration in plasma, and later disease progression (PMID:11752157)
- CC chemokine receptor 5 (CCR5) mRNA expression in pulmonary sarcoidosis (PMID:11803051)
- results support the conclusion that the CCR5-Delta32/Delta32 genotype mediated resistance is incomplete and is associated with acquisition of exclusively-X4 variants of HIV-1 (PMID:11873082)
- CXCR-4 was constitutively expressed by thymocytes and it mediated polarization, migration and intercellular CA2+ increase in response to SDF-1. (PMID:11876757)
- the role of CD4, CXCR4, and CCR5 in HIV envelope-mediated apoptosis was examined in peripheral blood mononuclear cells (PMID:11878912)
- cytokine regulation of CCR5 expression on monocytes, monocyte-derived macrophages (MDMs), and microglia was investigated (PMID:11920312)
- Lipopolysaccharide,lipoarabinomannan and lipoteichoic acid down-regulated the expression of CXCR4 and CCR5 on monocytes (PMID:11920324)
- Results identified specific regions in CCR5 that confer HIV-1 coreceptor function, structural rearrangements in the transmembrane region that may modulate this activity, and a role for the extracellular surface in folding and assembly. (PMID:11937056)
- Graves’ disease is associated with an altered CCR5 expression in thyroid-derived compared to peripheral blood t lymphocytes (PMID:11966764)
- Elevated expression of CCR5 by myeloid (CD11c+) blood dendritic cells in multiple sclerosis and acute optic neuritis (PMID:11966770)
- High level expression of CCR5 is a characteristic and selective feature of circulating V delta 2 gamma delta T cells, which is in line with their suspected function as Th1 effector T cells. (PMID:11994442)
- CCR5 and CXCR4 are present on the resident testicular macrophages in the interstitial space but not in the germ cell line (PMID:11994538)
- Cholesterol is essential for macrophage inflammatory protein 1 beta binding and signaling and conformational integrity of CC chemokine receptor 5. (PMID:12036855)
- Frequency of the HIV-protective CC chemokine receptor 5-Delta32/Delta32 genotype is increased in hepatitis C. (PMID:12055576)
- decreased density of the CCR5 receptor on the surface of CD4+ lymphocytes and monocytes/macrophages is associated with the CCR5-59653T transition in the promoter region (PMID:12056598)
- Most Natural killer t-cells express receptors for extralymphoid tissue or inflammation-related chemokines (CCR2, CCR5, and CXCR3), while few NKT cells express lymphoid tissue-homing chemokine receptors (CCR7 and CXCR5). (PMID:12070001)
- chronic hepatitis C, but not hepatitis B, infection alters surface expression of CCR1 and CCR5 in T cells, resulting in lower CC chemokine responsiveness. (PMID:12085329)
- Caco-2 and M cells do not express CCR5, but transfection of these cells with CCR5 cDNA restores transport of R5 virus, which demonstrates that HIV-1 transport across M cells is receptor-mediated. (PMID:12093918)
- CCR5 mediates Fas- and caspase-8 dependent apoptosis of both uninfected and HIV infected primary human CD4 T cells (PMID:12131184)
- Data show that two distinct forms of CCR5 protein, 62 and 42k Da, are present in lymphocytic cells. (PMID:12163044)
- tyrosine sulfastion of n-terminal peptide follows a discrete pattern and temporal sequence (PMID:12169668)
- expression detected in a stromal cell line, a myeloma cell line, and primary multiple myeloma cells and may be target for MIP1A and MIP1B. (PMID:12200385)
- prevalence of CCR5-Delta32 allele frequency in a large Pakistani population sample representing 10 ethnic groups (PMID:12215252)
- Binding chemokines modulate CXCL12 (SDF-1)-induced responses of progenitor B cells in human bone marrow through heterologous desensitization of the CXCR4 chemokine receptor (PMID:12239139)
- P. falciparum antigens (PF-Ags) variably regulate the expression of HIV-1 coreceptors and modulate the infectability of CD4 cells by HIV-1 (PMID:12355376)
- Significant increase in surface CCR5 in CD4+, CD8+, CD19+ and CD14+ cells as well as an increased percentage of CXCR3 and CXCR4 in CD14+ cells in MS patients. (PMID:12356205)
- role of IL-12 and IFN-gamma on inducing inflammatory chemokine secretion and down-regulating CCR5 expression in human T cells (PMID:12377943)
- influence of the major CCR5 promoter or coding region variants as haplotypes and genotypes in a cohort of 250 chronically infected HCV patients (PMID:12403355)
- CCR5 is phosphorylated at specific sites by protein kinase C and GPCR kinase (PMID:12403770)
- These results suggest that oligomerization of chemokine receptor CCR5 and opioid receptors mu, delta and kappa on the cell membrane of human or monkey lymphocytes may modulate receptor functions. (PMID:12413885)
- chemokine receptor CCR5 deletion mutation is associated with multiple sclerosis in HLA-DR4-positive Russians (PMID:12451219)
- META-ANALYSIS: Effect of CCR5-delta32 heterozygosity on the risk of perinatal HIV-1 infection (PMID:12514416)
- An increase in the numbers of CCR5(+) cells in H. pylori-infected stomach mucosa suggests that this molecule may play an important role in gastric immune responses. (PMID:12522035)
- physical association of CD4 and CCR5 results in receptor cross-talk with allosteric CD4-dependent regulation of the binding and signaling properties of CCR5 (PMID:12531905)
- Limited protective effect of the CCR5Delta32/CCR5Delta32 genotype on human immunodeficiency virus infection incidence in a cohort of patients with hemophilia and selection for genotypic X4 virus (PMID:12552446)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ccr11.1 | ENSDARG00000070755 |
| danio_rerio | ccr2 | ENSDARG00000079829 |
| danio_rerio | si:ch211-207g17.3 | ENSDARG00000105363 |
| mus_musculus | Ccr5 | ENSMUSG00000079227 |
| rattus_norvegicus | Ccr5 | ENSRNOG00000049115 |
Paralogs (23): CCR6 (ENSG00000112486), CCRL2 (ENSG00000121797), CCR2 (ENSG00000121807), CXCR4 (ENSG00000121966), CCR7 (ENSG00000126353), ACKR4 (ENSG00000129048), ACKR3 (ENSG00000144476), ACKR2 (ENSG00000144648), RGR (ENSG00000148604), CXCR5 (ENSG00000160683), CXCR1 (ENSG00000163464), CCR1 (ENSG00000163823), CX3CR1 (ENSG00000168329), CXCR6 (ENSG00000172215), XCR1 (ENSG00000173578), CCR9 (ENSG00000173585), CCR8 (ENSG00000179934), CXCR2 (ENSG00000180871), GALR2 (ENSG00000182687), CCR3 (ENSG00000183625), CCR4 (ENSG00000183813), CCR10 (ENSG00000184451), CXCR3 (ENSG00000186810)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:107182) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 50 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| impaired macrophage chemotaxis | 3 |
| abnormal response to cardiac infarction | 1 |
| decreased metastatic potential | 1 |
| abnormal locomotor behavior | 1 |
| abnormal spatial learning | 1 |
| abnormal cardiovascular system physiology | 1 |
| decreased inflammatory response | 1 |
| increased susceptibility to bacterial infection | 1 |
| abnormal CD4-positive, alpha beta T cell morphology | 1 |
| abnormal leukocyte physiology | 1 |
| abnormal conditioned taste aversion behavior | 1 |
| abnormal cytokine secretion | 1 |
| liver failure | 1 |
| increased alcohol consumption | 1 |
| abnormal leukocyte adhesion | 1 |
| abnormal nervous system physiology | 1 |
| abnormal glial cell physiology | 1 |
| increased length of allograft survival | 1 |
| abnormal CD8-positive, alpha beta T cell morphology | 1 |
| decreased T cell proliferation | 1 |
| decreased susceptibility to injury | 1 |
| increased susceptibility to fungal infection | 1 |
| abnormal heart size | 1 |
| cornea vascularization | 1 |
| increased susceptibility to type IV hypersensitivity reaction | 1 |
+25 more (showing top 25).
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Trachypithecus phayrei | O97879 | 100.0% | Diamond |
| Pongo pygmaeus | O97881 | 100.0% | Diamond |
| Pan troglodytes | P56440 | 100.0% | Diamond |
| Pan paniscus | P60574 | 100.0% | Diamond |
| Lophocebus aterrimus | P61755 | 100.0% | Diamond |
| Pongo abelii | P61756 | 100.0% | Diamond |
| Semnopithecus entellus | P61757 | 100.0% | Diamond |
| Macaca mulatta | P61813 | 100.0% | Diamond |
| Macaca fascicularis | P61814 | 100.0% | Diamond |
| Macaca nemestrina | P61815 | 100.0% | Diamond |
| Papio anubis | P68269 | 100.0% | Diamond |
| Papio hamadryas | P68270 | 100.0% | Diamond |
| Cercocebus atys | O62743 | 99.7% | Diamond |
| Trachypithecus francoisi | O97878 | 99.7% | Diamond |
| Rhinopithecus bieti | O97880 | 99.7% | Diamond |
| Rhinopithecus avunculus | O97962 | 99.7% | Diamond |
| Macaca arctoides | O97975 | 99.7% | Diamond |
| Meleagris gallopavo | P33396 | 99.7% | Diamond |
| Gorilla gorilla gorilla | P56439 | 99.7% | Diamond |
| Gallus gallus | P79785 | 99.7% | Diamond |
| Hylobates moloch | Q95NC0 | 99.7% | Diamond |
| Theropithecus gelada | Q95NC1 | 99.7% | Diamond |
| Symphalangus syndactylus | Q95NC5 | 99.7% | Diamond |
| Nasalis larvatus | Q95NC7 | 99.7% | Diamond |
| Colobus polykomos | Q95NC8 | 99.7% | Diamond |
| Cercocebus galeritus | Q9TV49 | 99.7% | Diamond |
| Pygathrix nemaeus | O97882 | 99.4% | Diamond |
| Nomascus leucogenys | O97883 | 99.4% | Diamond |
| Chlorocebus aethiops | P56493 | 99.4% | Diamond |
| Trachypithecus johnii | Q95NC6 | 99.4% | Diamond |
| Mandrillus sphinx | Q95ND1 | 99.4% | Diamond |
| Mandrillus leucophaeus | Q95ND2 | 99.4% | Diamond |
| Chlorocebus tantalus | Q95NE8 | 99.4% | Diamond |
| Allochrocebus solatus | Q9BGN6 | 99.4% | Diamond |
| Chlorocebus pygerythrus | Q9TV42 | 99.4% | Diamond |
| Allochrocebus lhoesti | Q9XT76 | 99.4% | Diamond |
| Miopithecus talapoin | Q95NC3 | 99.1% | Diamond |
| Erythrocebus patas | Q95ND0 | 99.1% | Diamond |
| Chlorocebus sabaeus | Q9TV43 | 99.1% | Diamond |
| Cercopithecus cephus | Q9TV47 | 99.1% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| CCR5AS | ncRNA | 102724297 |
| CCR1 | protein-coding | 1230 |
| CCR3 | protein-coding | 1232 |
| CCR2 | protein-coding | 729230 |
| LINC02009 | ncRNA | 105377068 |
| CCRL2 | protein-coding | 9034 |
| LTF | protein-coding | 4057 |
| RTP3 | protein-coding | 83597 |
Protein
Protein identifiers
C-C chemokine receptor type 5 — P51681 (reviewed: P51681)
Alternative names: CHEMR13, HIV-1 fusion coreceptor
All UniProt accessions (2): P51681, Q38L21
UniProt curated annotations — full annotation on UniProt →
Function. Receptor for a number of inflammatory CC-chemokines including CCL3/MIP-1-alpha, CCL4/MIP-1-beta and RANTES and subsequently transduces a signal by increasing the intracellular calcium ion level. May play a role in the control of granulocytic lineage proliferation or differentiation. Participates in T-lymphocyte migration to the infection site by acting as a chemotactic receptor. (Microbial infection) Acts as a coreceptor (CD4 being the primary receptor) of human immunodeficiency virus-1/HIV-1.
Subunit / interactions. Interacts with PRAF2. Efficient ligand binding to CCL3/MIP-1alpha and CCL4/MIP-1beta requires sulfation, O-glycosylation and sialic acid modifications. Glycosylation on Ser-6 is required for efficient binding of CCL4. Interacts with GRK2. Interacts with ARRB1 and ARRB2. Interacts with CNIH4. Interacts with S100A4; this interaction stimulates T-lymphocyte chemotaxis. (Microbial infection) Interacts with HIV-1 surface protein gp120. (Microbial infection) May interact with human cytomegalovirus/HHV-5 protein UL78. (Microbial infection) Interacts with Kaposi virus protein vCCL2.
Subcellular location. Cell membrane.
Tissue specificity. Highly expressed in spleen, thymus, in the myeloid cell line THP-1, in the promyeloblastic cell line KG-1a and on CD4+ and CD8+ T-cells. Medium levels in peripheral blood leukocytes and in small intestine. Low levels in ovary and lung.
Post-translational modifications. Sulfated on at least 2 of the N-terminal tyrosines. Sulfation contributes to the efficiency of HIV-1 entry and is required for efficient binding of the chemokines, CCL3 and CCL4. O-glycosylated, but not N-glycosylated. Ser-6 appears to be the major site even if Ser-7 may be also O-glycosylated. Also sialylated glycans present which contribute to chemokine binding. Thr-16 and Ser-17 may also be glycosylated and, if so, with small moieties such as a T-antigen. Palmitoylation in the C-terminal is important for cell surface expression, and to a lesser extent, for HIV entry. Phosphorylation on serine residues in the C-terminal is stimulated by binding CC chemokines especially by APO-RANTES.
Disease relevance. Type 1 diabetes mellitus 22 (T1D22) [MIM:612522] A multifactorial disorder of glucose homeostasis that is characterized by susceptibility to ketoacidosis in the absence of insulin therapy. Clinical features are polydipsia, polyphagia and polyuria which result from hyperglycemia-induced osmotic diuresis and secondary thirst. These derangements result in long-term complications that affect the eyes, kidneys, nerves, and blood vessels. Disease susceptibility is associated with variants affecting the gene represented in this entry.
Induction. (Microbial infection) May be down-regulated by human cytomegalovirus/HHV-5 protein UL78.
Polymorphism. Variations in CCR5 are associated with resistance or susceptibility to immunodeficiency virus type 1 (resistance or susceptibility to HIV-1) [MIM:609423]. Variations in CCR5 gene also influence the rate of progression to AIDS after infection. Variations in CCR5 are associated with susceptibility to West Nile virus (WNV) infection [MIM:610379].
Similarity. Belongs to the G protein-coupled receptor 1 family.
RefSeq proteins (3): NP_000570, NP_001093638, NP_001381712* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR000355 | Chemokine_rcpt | Family |
| IPR002240 | Chemokine_CCR5 | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
| IPR050119 | CCR1-9-like | Family |
Pfam: PF00001
UniProt features (113 total): sequence variant 38, mutagenesis site 22, helix 16, topological domain 8, modified residue 8, transmembrane region 7, strand 3, turn 3, lipid moiety-binding region 3, glycosylation site 2, disulfide bond 2, chain 1
Structure
Experimental structures (PDB)
26 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 5YD3 | Crystal structure of the scFv antibody 4B08 with epitope peptide | X-RAY DIFFRACTION | 1.35 |
| 5YD4 | Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation T6A) | X-RAY DIFFRACTION | 1.35 |
| 5YY4 | Crystal structure of the scFv antibody 4B08 with sulfated epitope peptide | X-RAY DIFFRACTION | 1.59 |
| 9J8A | Structure of antibody BA8 in complex with sulfated peptide from CCR5 | X-RAY DIFFRACTION | 1.75 |
| 5YD5 | Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation N3A) | X-RAY DIFFRACTION | 1.96 |
| 5UIW | Crystal Structure of CC Chemokine Receptor 5 (CCR5) in complex with high potency HIV … | X-RAY DIFFRACTION | 2.2 |
| 7F1T | Crystal structure of the human chemokine receptor CCR5 in complex with MIP-1a | X-RAY DIFFRACTION | 2.6 |
| 4MBS | Crystal Structure of the CCR5 Chemokine Receptor | X-RAY DIFFRACTION | 2.71 |
| 6AKX | The Crystal structure of Human Chemokine Receptor CCR5 in complex with compound 21 | X-RAY DIFFRACTION | 2.8 |
| 6AKY | The Crystal structure of Human Chemokine Receptor CCR5 in complex with compound 34 | X-RAY DIFFRACTION | 2.8 |
| 7F1S | Cryo-EM structure of the apo chemokine receptor CCR5 in complex with Gi | ELECTRON MICROSCOPY | 2.8 |
| 7F1Q | Cryo-EM structure of the chemokine receptor CCR5 in complex with MIP-1a and Gi | ELECTRON MICROSCOPY | 2.9 |
| 7F1R | Cryo-EM structure of the chemokine receptor CCR5 in complex with RANTES and Gi | ELECTRON MICROSCOPY | 3 |
| 7O7F | Structural basis of the activation of the CC chemokine receptor 5 by a chemokine agonist | ELECTRON MICROSCOPY | 3.15 |
| 7NJZ | X-ray crystallography study of RoAb13 which binds to PIYDIN, a part of the CCR5 N … | X-RAY DIFFRACTION | 3.2 |
| 8AS2 | Structure of arrestin2 in complex with 4P CCR5 phosphopeptide and Fab30 | X-RAY DIFFRACTION | 3.2 |
| 9WP1 | Structural insights into tyrosine sulfation of CCR5 by human tyrosylprotein … | X-RAY DIFFRACTION | 3.2 |
| 7NW3 | X-ray crystallographic study of PIYDIN, which contains the truncation determinants of … | X-RAY DIFFRACTION | 3.2 |
| 8AS3 | Structure of arrestin2 in complex with 6P CCR5 phosphopeptide and Fab30 | X-RAY DIFFRACTION | 3.5 |
| 6MEO | Structural basis of coreceptor recognition by HIV-1 envelope spike | ELECTRON MICROSCOPY | 3.9 |
| 6MET | Structural basis of coreceptor recognition by HIV-1 envelope spike | ELECTRON MICROSCOPY | 4.5 |
| 2L87 | The 27-residue N-terminus CCR5-peptide in a ternary complex with HIV-1 gp120 and a … | SOLUTION NMR | |
| 2MZX | CCR5-ECL2 helical structure, residues Q186-T195 | SOLUTION NMR | |
| 2RLL | CCR5 Nt(7-15) | SOLUTION NMR | |
| 2RRS | NMR Structure of LC4 transmembrane segment of CCR5 | SOLUTION NMR | |
| 6FGP | NMR solution structure of monomeric CCL5 in complex with a doubly-sulfated N-terminal … | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P51681-F1 | 85.41 | 0.66 |
Antibody-complex structures (SAbDab)
10 antibodies co-crystallized with this protein: 5YD3, 5YD4, 5YD5, 5YY4, 7NJZ, 7NW3, 7O7F, 8AS2, 8AS3, 9J8A
Human Protein Atlas
Protein class: CD markers, G-protein coupled receptors, GPCRs excl olfactory receptors, Chemokines and chemotactic factors receptors, Predicted membrane proteins, GPCRHMM predicted membrane proteins, Disease related genes, FDA approved drug targets, Small molecule drugs, Human disease related genes, Diabetes
Protein evidence: Evidence at protein level
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (11)
| Type | Positions |
|---|---|
| Sulfotyrosine | 3, 10, 14, 15 |
| Phosphoserine | 336, 337, 342, 349 |
| S-palmitoyl cysteine | 321, 323, 324 |
Disulfide bonds (2)
| Type | Positions |
|---|---|
| Disulfide bond | 20–269, 101–178 |
Glycosylation sites (2)
| Type | Positions |
|---|---|
| O-linked (galnac…) serine | 6, 7 |
Mutagenesis-validated functional residues (22)
| Position | Phenotype |
|---|---|
| 3 | no sulfation and strongly decreases binding with ccl4 and ccl5; when associated with d-10; d-14 and d-15. restores most ccl4 binding; when … |
| 3 | no sulfation and strongly decreases binding with ccl4 and ccl5; when associated with f-10; f-14 and f-15. |
| 6–7 | loss of molecular mass of 2 kda compared to wild type when treated with o-glycosidase. dramatically reduces binding with ccl4. loss of … |
| 6 | strongly decreases ccl4 binding. no change in glycosylation status. |
| 7 | no change in glycosylation status and binds ccl4 as efficiently as wild type. |
| 10 | no sulfation and greatly decreases binding of ccl4 and ccl5; when associated with f-3; f-14 and f-15. small loss of sulfation; when … |
| 14 | no sulfation and greatly decreased binding of ccl4 and ccl5; when associated with d-3; d-10 and d-14. no restoration of ccl4 binding; when … |
| 14 | no sulfation and greatly decreases binding of ccl4 and ccl5; when associated with f-3; f-10; and f-15. small loss of sulfation; when … |
| 15 | no sulfation and greatly decreased binding of ccl4 and ccl5; when associated with d-3; d-10 and d-14. restored most ccl4 binding; when … |
| 15 | no sulfation and greatly decreases binding of ccl4 and ccl5; when associated with f-3; f-10 and f-14. small loss of sulfation; when … |
| 16–17 | similar decrease in molecular mass when treated with o-glycosidase as for wild type. loss of molecular mass of about 2 kda as compared to … |
| 20 | decreases to 40% surface expression. no effect on conformational integrity. disrupts binding of ccl4. decreases cell hiv infection. |
| 101 | decreases to 40% surface expression. disrupts conformational integrity. disrupts binding of ccl4. decreases hiv cell infection. |
| 178 | decreases to 40% surface expression. disrupts conformational integrity. disrupts binding of ccl4. decreases hiv cell infection. |
| 269 | decreases to 40% surface expression. no effect on conformational integrity. disrupts binding of ccl4. decreases cell hiv infection. |
| 321 | small reduction in palmitoylation. cell surface expression reduced by 50%. greatly reduced palmitoylation. cell surface expression greatly … |
| 323 | small reduction in palmitoylation. cell surface expression reduced by 50%. greatly reduced palmitoylation. cell surface expression greatly … |
| 324 | small reduction in palmitoylation. cell surface expression reduced by 50%. greatly reduced palmitoylation. cell surface expression greatly … |
| 336 | apo-rantes-stimulated phosphorylation reduced by 15%; apo-rantes-stimulated phosphorylation reduced by 30-50%; when associated with a-337 … |
| 337 | apo-rantes-stimulated phosphorylation reduced by 18%; apo-rantes-stimulated phosphorylation reduced by 30-50% on apo-rantes stimulation … |
| 342 | apo-rantes-stimulated phosphorylation reduced by 42%. phosphorylation reduced by 50% on apo-rantes stimulation; when associated with a-336 … |
| 349 | apo-rantes-stimulated phosphorylation reduced by 43%; apo-rantes-stimulated phosphorylation reduced by 30-50%; when associated with a-336 … |
Function
Pathways and Gene Ontology
Reactome pathways
5 curated (TAS) of 20; 7 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
20 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-173107 | Binding and entry of HIV virion ⚕ | curated |
| R-HSA-380108 | Chemokine receptors bind chemokines | curated |
| R-HSA-9968734 | Differentiation of Circulating Monocytes | curated |
| R-HSA-418594 | G alpha (i) signalling events | curated |
| R-HSA-6783783 | Interleukin-10 signaling | curated |
| R-HSA-1643685 | Disease ⚕ | — |
| R-HSA-162594 | Early Phase of HIV Life Cycle ⚕ | — |
| R-HSA-162906 | HIV Infection ⚕ | — |
| R-HSA-162587 | HIV Life Cycle ⚕ | — |
| R-HSA-5663205 | Infectious disease ⚕ | — |
| R-HSA-9824446 | Viral Infection Pathways ⚕ | — |
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) | — |
| R-HSA-1280215 | Cytokine Signaling in Immune system | — |
| R-HSA-388396 | GPCR downstream signalling | — |
| R-HSA-500792 | GPCR ligand binding | — |
| R-HSA-168256 | Immune System | — |
| R-HSA-375276 | Peptide ligand-binding receptors | — |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-372790 | Signaling by GPCR | — |
| R-HSA-449147 | Signaling by Interleukins | — |
MSigDB gene sets: 383 (showing top):
MODULE_92, LIANG_HEMATOPOIESIS_STEM_CELL_NUMBER_SMALL_VS_HUGE_UP, WALLACE_PROSTATE_CANCER_RACE_UP, GOBP_DENDRITIC_CELL_MIGRATION, GOBP_CELL_CHEMOTAXIS, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_INFLAMMATORY_RESPONSE, GOBP_RESPONSE_TO_PEPTIDE, GOBP_REGULATION_OF_LEUKOCYTE_APOPTOTIC_PROCESS, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOBP_CELLULAR_RESPONSE_TO_BIOTIC_STIMULUS, MODULE_64, KENNY_CTNNB1_TARGETS_UP, GOCC_CELL_SURFACE, MODULE_128
GO Biological Process (22): MAPK cascade (GO:0000165), dendritic cell chemotaxis (GO:0002407), calcium ion transport (GO:0006816), chemotaxis (GO:0006935), inflammatory response (GO:0006954), immune response (GO:0006955), cellular defense response (GO:0006968), cell surface receptor signaling pathway (GO:0007166), G protein-coupled receptor signaling pathway (GO:0007186), positive regulation of cytosolic calcium ion concentration (GO:0007204), cell-cell signaling (GO:0007267), release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (GO:0014808), calcium-mediated signaling (GO:0019722), signaling (GO:0023052), cell chemotaxis (GO:0060326), response to cholesterol (GO:0070723), cellular response to lipopolysaccharide (GO:0071222), negative regulation of macrophage apoptotic process (GO:2000110), signal transduction (GO:0007165), symbiont entry into host cell (GO:0046718), chemokine-mediated signaling pathway (GO:0070098), cellular response to cytokine stimulus (GO:0071345)
GO Molecular Function (11): virus receptor activity (GO:0001618), actin binding (GO:0003779), phosphatidylinositol-4,5-bisphosphate phospholipase C activity (GO:0004435), chemokine receptor activity (GO:0004950), coreceptor activity (GO:0015026), C-C chemokine receptor activity (GO:0016493), C-C chemokine binding (GO:0019957), identical protein binding (GO:0042802), chemokine (C-C motif) ligand 5 binding (GO:0071791), G protein-coupled receptor activity (GO:0004930), protein binding (GO:0005515)
GO Cellular Component (6): cytoplasm (GO:0005737), endosome (GO:0005768), plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), cell surface (GO:0009986), membrane (GO:0016020)
Reactome top-level categories
16 top-level categories:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| Early Phase of HIV Life Cycle | 1 |
| Peptide ligand-binding receptors | 1 |
| GPCR downstream signalling | 1 |
| Signaling by Interleukins | 1 |
| Developmental Cell Lineages | 1 |
| Immune System | 1 |
| HIV Infection | 1 |
| HIV Life Cycle | 1 |
| Viral Infection Pathways | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
| Class A/1 (Rhodopsin-like receptors) | 1 |
| Cytokine Signaling in Immune system | 1 |
| Disease | 1 |
| Infectious disease | 1 |
GO top-level categories
59 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| intracellular signaling cassette | 2 |
| defense response | 2 |
| signal transduction | 2 |
| cell communication | 2 |
| signaling | 2 |
| chemokine binding | 2 |
| C-C chemokine binding | 2 |
| leukocyte chemotaxis | 1 |
| dendritic cell migration | 1 |
| metal ion transport | 1 |
| response to chemical | 1 |
| taxis | 1 |
| immune system process | 1 |
| response to stimulus | 1 |
| G protein-coupled receptor activity | 1 |
| regulation of biological quality | 1 |
| sarcoplasmic reticulum calcium ion transport | 1 |
| release of sequestered calcium ion into cytosol by endoplasmic reticulum | 1 |
| regulation of biological process | 1 |
| chemotaxis | 1 |
| cell migration | 1 |
| cellular response to chemical stimulus | 1 |
| response to sterol | 1 |
| response to alcohol | 1 |
| response to lipopolysaccharide | 1 |
| cellular response to molecule of bacterial origin | 1 |
| cellular response to lipid | 1 |
| cellular response to oxygen-containing compound | 1 |
| negative regulation of myeloid cell apoptotic process | 1 |
| macrophage apoptotic process | 1 |
| negative regulation of leukocyte apoptotic process | 1 |
| regulation of macrophage apoptotic process | 1 |
| cellular process | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| viral life cycle | 1 |
| symbiont entry into host | 1 |
| symbiont entry into host cell | 1 |
| exogenous protein binding | 1 |
| cytoskeletal protein binding | 1 |
| C-type glycerophospholipase activity | 1 |
| G protein-coupled chemoattractant receptor activity | 1 |
| cytokine receptor activity | 1 |
| chemokine-mediated signaling pathway | 1 |
| signaling receptor activity | 1 |
| chemokine receptor activity | 1 |
| protein binding | 1 |
| transmembrane signaling receptor activity | 1 |
| G protein-coupled receptor signaling pathway | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| endomembrane system | 1 |
| cytoplasmic vesicle | 1 |
| membrane | 1 |
| cell periphery | 1 |
| plasma membrane | 1 |
| cell surface | 1 |
| side of membrane | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 17 of 39 annotations. The rest are phylogenetic / computational / electronic (IEA).
17 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| G protein-coupled receptor signaling pathway | BP | mutant phenotype |
| MAPK cascade | BP | expression pattern |
| calcium ion transport | BP | direct assay |
| calcium-mediated signaling | BP | direct assay |
| cell-cell signaling | BP | direct assay |
| cellular response to lipopolysaccharide | BP | expression pattern |
| release of sequestered calcium ion into cytosol by sarcoplasmic reticulum | BP | direct assay |
| response to cholesterol | BP | mutant phenotype |
| signaling | BP | expression pattern |
| cell surface | CC | direct assay |
| endosome | CC | direct assay |
| external side of plasma membrane | CC | direct assay |
| C-C chemokine binding | MF | physical interaction |
| C-C chemokine receptor activity | MF | direct assay |
| actin binding | MF | direct assay |
| chemokine (C-C motif) ligand 5 binding | MF | physical interaction |
| identical protein binding | MF | physical interaction |
Protein interactions and networks
STRING
showing 15 of 3,150 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CCR5 | CCL5 | P13501 | 958 |
| CCR5 | CD4 | P01730 | 946 |
| CCR5 | CCL3 | P10147 | 941 |
| CCR5 | ITIH4 | Q14624 | 938 |
| CCR5 | CCL4 | P13236 | 929 |
| CCR5 | CCL2 | P13500 | 896 |
| CCR5 | CD8A | P01732 | 890 |
| CCR5 | IL6 | P05231 | 856 |
| CCR5 | IFNG | P01579 | 854 |
| CCR5 | CXCL12 | P48061 | 830 |
| CCR5 | CCL3L1 | P16619 | 823 |
| CCR5 | CX3CL1 | P78423 | 816 |
| CCR5 | TNF | P01375 | 809 |
| CCR5 | IL10 | P22301 | 809 |
| CCR5 | ERVW-1 | Q9UQF0 | 792 |
IntAct
Human interaction partners of CCR5 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
20 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| CD4 | physical association | 0.670 | 3 |
| CXCR4 | physical association | 0.670 | 3 |
| CCL5 | physical association | 0.660 | 5 |
| EMP1 | physical association | 0.560 | 3 |
| PRAF2 | physical association | 0.520 | 3 |
| CCL17 | physical association | 0.500 | 2 |
| ACKR1 | physical association | 0.470 | 3 |
| CCL4 | physical association | 0.400 | 2 |
| ARL6IP5 | physical association | 0.400 | 1 |
| MYH9 | physical association | 0.400 | 1 |
| RAMP1 | physical association | 0.400 | 1 |
| RAMP2 | physical association | 0.400 | 1 |
| RAMP3 | physical association | 0.400 | 1 |
| C | physical association | 0.370 | 1 |
| CREB3 | physical association | 0.370 | 1 |
| CST9L | physical association | 0.370 | 1 |
| CTBP2 | physical association | 0.370 | 1 |
| ETV5 | physical association | 0.370 | 1 |
| IL24 | physical association | 0.370 | 1 |
| SLC20A2 | physical association | 0.370 | 1 |
BioGRID (25 interactions; top human partners by supporting records): CCL5 (Affinity Capture-Western; 3 records), CCL3L1 (Reconstituted Complex; 2 records), PSMA5 (Two-hybrid; 2 records), AFP (Affinity Capture-Western), ARRB1 (Reconstituted Complex), CCL3 (Reconstituted Complex), CD4 (Affinity Capture-Western), CST9L (Two-hybrid), CTBP2 (Two-hybrid), CXCR4 (Reconstituted Complex), EMP1 (Two-hybrid), ETV5 (Two-hybrid), IL24 (Two-hybrid), JAK2 (Affinity Capture-Western), PIK3R2 (Affinity Capture-Western)
SIGNOR signaling
showing 12 of 16 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| maraviroc | down-regulates | CCR5 | “chemical inhibition” |
| “Vicriviroc Malate” | down-regulates | CCR5 | “chemical inhibition” |
| CCL5 | “up-regulates activity” | CCR5 | binding |
| CCR5 | “up-regulates activity” | GNAI1 | binding |
| CCR5 | “up-regulates activity” | GNAI2 | binding |
| CCR5 | “up-regulates activity” | GNAZ | binding |
| CCR5 | “up-regulates activity” | GNAO1 | binding |
| CCR5 | “up-regulates activity” | GNA15 | binding |
| CCL3 | “up-regulates activity” | CCR5 | binding |
| CCL4 | “up-regulates activity” | CCR5 | binding |
| CCR5 | “up-regulates activity” | ERK1/2 | phosphorylation |
| GRK3 | “down-regulates activity” | CCR5 | phosphorylation |
Protein complexes (CORUM) (10)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
10 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| ★ CCR5-CD4-CXCR4 complex | 3 | CCR5, CD4, CXCR4 |
| ★ CCR5-CNIH4 complex | 2 | CCR5, CNIH4 |
| ★ C5AR1-CCR5 complex | 2 | C5AR1, CCR5 |
| ★ CCR5-CXCR4 complex | 2 | CCR5, CXCR4 |
| ★ CCR2-CCR5 complex | 2 | CCR2, CCR5 |
| ★ CCR5-OPRM1 complex | 2 | CCR5, OPRM1 |
| ★ CCR5-OPRD1 complex | 2 | CCR5, OPRD1 |
| ★ CCR5-OPRK1 complex | 2 | CCR5, OPRK1 |
| ★ CCR5-CD4 complex | 2 | CCR5, CD4 |
| ★ C-C chemokine receptor type 5 | 1 | CCR5 |
Ligand–receptor pairs (CellPhoneDB) (5)
Curated ligand–receptor partners (cell-cell communication), distinct from the protein–protein interactions above.
5 ligand–receptor pairs:
| Partner | This gene’s role | Signaling class |
|---|---|---|
| CCL7 | receptor | Signaling by Chemokines |
| CCL5 | receptor | Signaling by Chemokines |
| CCL3 | receptor | Signaling by Chemokines |
| CCL8 | receptor | Signaling by Chemokines |
| CCL4 | receptor | Signaling by Chemokines |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 20 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein transport | 6 | 13.9× | 3e-04 |
| immune response | 5 | 12.4× | 7e-04 |
| inflammatory response | 5 | 9.9× | 2e-03 |
| G protein-coupled receptor signaling pathway | 5 | 9.5× | 2e-03 |
Disease & clinical
Genetic variants
Variant evidence for CCR5: 46 ClinVar records (0 pathogenic / likely pathogenic); 9 GWAS associations.
ClinVar
46 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 29 |
| Likely benign | 4 |
| Benign | 5 |
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 17 predictions of 23):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 3:46370989–46370990 | donor_loss | 0.9900 | 3 |
| 3:46370989 | donor_loss | 0.9800 | |
| 3:46372890–46372891 | acceptor_loss | 0.9800 | 3 |
| 3:46370990 | donor_loss | 0.9700 | |
| 3:46372889–46372891 | acceptor_loss | 0.9700 | 4 |
| 3:46372885 | acceptor_gain | 0.9200 | |
| 3:46372885 | acceptor_gain | 0.8100 | |
| 3:46373040 | acceptor_gain | 0.7500 | |
| 3:46372881 | acceptor_loss | 0.7400 | |
| 3:46373645 | acceptor_gain | 0.5400 |
AlphaMissense
682 missense substitutions predicted likely pathogenic (of 2,321 scored), across 197 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D76 | 8 | 0.946 | 0.980 |
| N48 | 8 | 0.936 | 0.980 |
| D125 | 8 | 0.936 | 0.974 |
| F304 | 8 | 0.892 | 0.987 |
| D66 | 8 | 0.853 | 0.906 |
| H289 | 8 | 0.826 | 0.951 |
| F118 | 8 | 0.820 | 0.923 |
| D276 | 8 | 0.709 | 0.811 |
| C178 | 7 | 0.971 | 0.986 |
| C101 | 7 | 0.967 | 0.986 |
| W94 | 7 | 0.952 | 0.993 |
| C20 | 7 | 0.943 | 0.969 |
| C269 | 7 | 0.930 | 0.957 |
| F166 | 7 | 0.919 | 0.967 |
| W248 | 7 | 0.897 | 0.975 |
| W153 | 7 | 0.895 | 0.994 |
| R126 | 7 | 0.891 | 0.961 |
| N293 | 7 | 0.889 | 0.978 |
| F182 | 7 | 0.851 | 0.946 |
| F113 | 7 | 0.806 | 0.943 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
1 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Head and Neck Squamous Cell Carcinoma (TCGA) | favorable | 0.000332 |
Disease associations
OMIM: gene MIM:601373 | disease phenotypes:
GWAS associations
9 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST009731_29 | Blood protein levels in cardiovascular risk | 8e-83 |
| GCST000612_32 | Celiac disease | 3e-17 |
| GCST002665_3 | Cerebrospinal fluid levels of Alzheimer’s disease-related proteins | 2e-13 |
| GCST003045_6 | Ulcerative colitis | 9e-10 |
| GCST004608_74 | Granulocyte percentage of myeloid white cells | 1e-9 |
| GCST003045_39 | Ulcerative colitis | 1e-8 |
| GCST003043_190 | Inflammatory bowel disease | 4e-8 |
| GCST005536_41 | Type 1 diabetes | 5e-8 |
| GCST004133_14 | Ulcerative colitis | 2e-6 |
EFO canonical traits (from GWAS)
2 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0006514 | Alzheimer’s disease biomarker measurement |
| EFO:0007997 | granulocyte percentage of myeloid white cells |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL274 (SINGLE PROTEIN), CHEMBL3301384 (PROTEIN COMPLEX)
Drugs by curated mechanism of action (ChEMBL)
Drugs whose curated ChEMBL mechanism of action targets the CCR5 protein itself — single-protein targets only (drugs acting on a protein family or complex that merely includes it are excluded). Includes antibodies and oligonucleotides that bioactivity screening does not capture.
12 curated-mechanism drugs:
| Drug | Modality | Max phase |
|---|---|---|
| MARAVIROC | Small molecule | 4 |
| APLAVIROC HYDROCHLORIDE | Small molecule | 3 |
| CENICRIVIROC | Small molecule | 3 |
| LERONLIMAB | Antibody | 3 |
| VICRIVIROC MALEATE | Small molecule | 3 |
| AZD5672 | Small molecule | 2 |
| BMS-813160 | Small molecule | 2 |
| INCB-9471 | Small molecule | 2 |
| PF-04634817 | Small molecule | 2 |
| PF-232798 | Small molecule | 2 |
| CCR5MAB004 | Unknown | 1 |
| HGS-1025 | Unknown | 1 |
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 78,757 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
15 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL256907 | MARAVIROC | 4 | 6 |
| CHEMBL2205807 | ABAMETAPIR | 4 | 761 |
| CHEMBL964 | DISULFIRAM | 4 | 39,061 |
| CHEMBL17157 | TERFENADINE | 4 | 25,528 |
| CHEMBL1255794 | APLAVIROC | 3 | 957 |
| CHEMBL1668019 | APLAVIROC HYDROCHLORIDE | 3 | 41 |
| CHEMBL2110727 | CENICRIVIROC | 3 | 2,245 |
| CHEMBL82301 | VICRIVIROC | 3 | 8,805 |
| CHEMBL1951914 | AZD5672 | 2 | 226 |
| CHEMBL4594419 | BMS-813160 | 2 | 60 |
| CHEMBL1688243 | INCB-9471 | 2 | 152 |
| CHEMBL78535 | ANCRIVIROC | 2 | 790 |
| CHEMBL4457723 | BMS-741672 | 2 | 2 |
| CHEMBL397647 | JNJ-17166864 CATION | 2 | 36 |
| CHEMBL2105686 | CENICRIVIROC MESYLATE | 1 | 87 |
PharmGKB: 1 entry (CPIC guideline: no)
PharmGKB variant annotations
Per-publication pharmacogenomic findings for this gene (significant associations).
1 published findings:
| Variant | Drug(s) | Category | Finding | PMID |
|---|---|---|---|---|
| rs333 | glatiramer acetate | Efficacy | Allele del is associated with decreased response to glatiramer acetate in people with Multiple Sclerosis as compared to allele GTCAGTATCAATTCTGGAAGAATTTCCAGACA. | PMID:22111603 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Chemokine receptors
Most potent curated ligand interactions (31 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| CCL5 | Full agonist | 9.7 | pKi |
| CCL4 | Full agonist | 9.6 | pKi |
| [125I]CCL4 (human) | Full agonist | 9.6 | pKd |
| AZD5672 | Antagonist | 9.59 | pIC50 |
| CCL8 | Full agonist | 9.3 | pKi |
| vicriviroc | Antagonist | 9.1 | pKi |
| CCL13 | Full agonist | 9.1 | pKi |
| [3H]maraviroc | Antagonist | 9.1 | pKd |
| CCL3 | Full agonist | 8.9 | pKi |
| [3H]ancriviroc | Antagonist | 8.9 | pKd |
| E913 | Antagonist | 8.7 | pIC50 |
| ancriviroc | Antagonist | 8.7 | pKi |
| BMS-681 | Antagonist | 8.62 | pIC50 |
| cenicriviroc | Antagonist | 8.6 | pIC50 |
| CCR5 antagonist 34 | Antagonist | 8.52 | pIC50 |
| TAK-220 | Antagonist | 8.5 | pIC50 |
| aplaviroc | Antagonist | 8.5 | pKi |
| vMIP-II | Antagonist | 8.3 | pIC50 |
| maraviroc | Antagonist | 8.1 | pIC50 |
| BP-CCL3 | Full agonist | 7.7 | pKi |
| CCL11 | Full agonist | 7.7 | pIC50 |
| Flu-CCL3 | Full agonist | 7.6 | pKi |
| CCL7 | Antagonist | 7.5 | pKi |
| CCL2 | Full agonist | 7.5 | pKi |
| TAK-779 | Antagonist | 7.5 | pKi |
Binding affinities (BindingDB)
2226 measured of 2381 human assays (2381 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| N-((1S)-3-(4-(3-(3,4-dichlorobenzyl)-1-ethylureido)piperidin-1-yl)-1-phenylbutyl)cyclobutanecarboxamide | IC50 | 0.003 nM |
| (4,6-Dimethyl-pyrimidin-5-yl)-(4-methyl-4-{(S)-3-methyl-4-[(S)-1-(4-trifluoromethyl-phenyl)-ethyl]-piperazin-1-yl}-piperidin-1-yl)-methanone | IC50 | 0.01 nM |
| N-((1S)-3-(4-(2-(3,4-dichlorophenyl)-N-ethylacetamido)piperidin-1-yl)-1-phenylbutyl)cyclobutanecarboxamide | IC50 | 0.05 nM |
| 3-(R)-Cyclopropyl-2-[(S)-3-{4-[3,3-difluoro-3-(4-fluoro-phenyl)-propyl]-piperidin-1-ylmethyl}-4-(3-fluoro-phenyl)-pyrrolidin-1-yl]-propionic acid | IC50 | 0.06 nM |
| CHEMBL181276 | IC50 | 0.06 nM |
| N-((1S)-3-(4-(N-ethyl-2-(4-(methylsulfonyl)phenyl)acetamido)piperidin-1-yl)-1-phenylbutyl)cyclobutanecarboxamide | IC50 | 0.07 nM |
| CHEMBL2164207 | IC50 | 0.08 nM |
| CHEMBL1926899 | IC50 | 0.09 nM |
| Allyl-{1-[(S)-4-(benzenesulfonyl-methyl-amino)-3-methyl-3-phenyl-butyl]-piperidin-4-yl}-carbamic acid 4-nitro-benzyl ester | IC50 | 0.1 nM |
| Allyl-[1-((3S,4S)-1-benzyl-4-phenyl-pyrrolidin-3-ylmethyl)-piperidin-4-yl]-carbamic acid 4-nitro-benzyl ester | IC50 | 0.1 nM |
| Cyclohexyl-{3-phenyl-4-[4-(3-phenyl-propyl)-piperidin-1-ylmethyl]-pyrrolidin-1-yl}-acetic acid | IC50 | 0.1 nM |
| (R)-3-Cyclobutyl-2-{(S)-3-phenyl-4-[4-(3-phenyl-propyl)-piperidin-1-ylmethyl]-pyrrolidin-1-yl}-propionic acid | IC50 | 0.1 nM |
| (R)-3-cyclopropyl-2-((3S,4S)-3-phenyl-4-((4-(3-phenylpropyl)piperidin-1-yl)methyl)pyrrolidin-1-yl)propanoic acid | IC50 | 0.1 nM |
| 2-cyclobutyl-2-{3-phenyl-4-[4-(3-phenylpropyl)hexahydro-1-pyridinylmethyl]tetrahydro-1H-1-pyrrolyl}acetic acid | IC50 | 0.1 nM |
| (R)-3-cyclobutyl-2-((3S,4S)-3-(3-fluorophenyl)-4-((4-(2-(4-fluorophenylthio)ethyl)piperidin-1-yl)methyl)pyrrolidin-1-yl)propanoic acid | IC50 | 0.1 nM |
| (4-{(4-Bromo-phenyl)-[(E)-ethoxyimino]-methyl}-4’-methyl-[1,4’]bipiperidinyl-1’-yl)-(2,6-dimethyl-4-pyridin-4-yl-phenyl)-methanone | KI | 0.1 nM |
| endo-methyl 3-(8-((S)-3-acetamido-3-(3-fluorophenyl)propyl)-8-azabicyclo[3.2.1]octan-3-yl)-2-methyl-6,7-dihydro-3H-imidazo[4,5-c]pyridine-5(4H)-carboxylate | IC50 | 0.1 nM |
| CHEMBL2164210 | IC50 | 0.1 nM |
| CHEMBL2164202 | IC50 | 0.1 nM |
| CHEMBL2164217 | IC50 | 0.11 nM |
| 4N-allyl-4N-[4-nitrobenzyloxycarboyl]-1-[4’-phenyl-(3a’S,4’S,5’S)-spiro[cyclohexane-1,2’-perhydropyrrolo[1,2-b]isoxazole]-5-ylmethyl]hexahydro-4-pyridinamine | IC50 | 0.13 nM |
| (+/-)-N-((1S)-3-(4-(3-isopropyl-5-methyl-4H-1,2,4-triazol-4-yl)piperidin-1-yl)-1-phenylbutyl)cyclopentanecarboxamide | IC50 | 0.137 nM |
| N-((1S)-3-(4-(3-benzyl-1-ethylureido)piperidin-1-yl)-1-phenylbutyl)cyclobutanecarboxamide | IC50 | 0.16 nM |
| CHEMBL2178577 | IC50 | 0.17 nM |
| Compound T140 | EC50 | 0.18 nM |
| (S)-(-)-8-{4-[2-(butoxy)ethoxy]phenyl}-1-isobutyl-N-(4-{[(4-propyl-4H-1,2,4-triazol-3-yl)methyl]sulfinyl}phenyl)-1,2,3,4-tetrahydro-1-benzazocine-5-carboxamide | IC50 | 0.19 nM |
| Allyl-[1-((3S,4S)-1-benzoyl-4-phenyl-pyrrolidin-3-ylmethyl)-piperidin-4-yl]-carbamic acid 4-nitro-benzyl ester | IC50 | 0.2 nM |
| Allyl-[1-((3S,4S)-1-cyclopentanecarbonyl-4-phenyl-pyrrolidin-3-ylmethyl)-piperidin-4-yl]-carbamic acid 4-nitro-benzyl ester | IC50 | 0.2 nM |
| 1-(1-Cyclohexylmethyl-4-phenyl-pyrrolidin-3-ylmethyl)-4-{3-[4-(1-methyl-1H-tetrazol-5-yl)-phenyl]-propyl}-piperidin-4-ol | IC50 | 0.2 nM |
| 1-(1-Cyclohexylmethyl-4-phenyl-pyrrolidin-3-ylmethyl)-4-{3-[4-(1H-tetrazol-5-yl)-phenyl]-propyl}-piperidin-4-ol | IC50 | 0.2 nM |
| 2-cyclopentyl-2-{3-phenyl-4-[4-(3-phenylpropyl)hexahydro-1-pyridinylmethyl]tetrahydro-1H-1-pyrrolyl}acetic acid | IC50 | 0.2 nM |
| (R)-3-Cyclobutyl-2-((S)-3-(3-fluoro-phenyl)-4-{4-[3-(4-trifluoromethyl-phenyl)-propyl]-piperidin-1-ylmethyl}-pyrrolidin-1-yl)-propionic acid | IC50 | 0.2 nM |
| 3-(R)-Cyclobutyl-2-((S)-3-{4-[3,3-difluoro-3-(4-fluoro-phenyl)-propyl]-piperidin-1-ylmethyl}-4-phenyl-pyrrolidin-1-yl)-propionic acid | IC50 | 0.2 nM |
| (R)-2-[(2S,3S)-3-[4-(2-Ethyl-5-naphthalen-2-ylmethyl-2H-pyrazol-3-yl)-piperidin-1-ylmethyl]-4-(3-fluoro-phenyl)-pyrrolidin-1-yl]-3,3-dimethyl-butyric acid | IC50 | 0.2 nM |
| (2R,4R)-2-[(2S,3S)-3-[4-(2-Ethyl-5-naphthalen-2-ylmethyl-2H-pyrazol-3-yl)-piperidin-1-ylmethyl]-4-(3-fluoro-phenyl)-pyrrolidin-1-yl]-3-methyl-pentanoic acid | IC50 | 0.2 nM |
| (2R,4R)-2-[(2S,3S)-3-[4-(2-Ethyl-5-naphthalen-1-ylmethyl-2H-pyrazol-3-yl)-piperidin-1-ylmethyl]-4-(3-fluoro-phenyl)-pyrrolidin-1-yl]-3-methyl-pentanoic acid | IC50 | 0.2 nM |
| (R)-2-[(2S,3S)-3-[4-(2-Ethyl-5-naphthalen-1-ylmethyl-2H-pyrazol-3-yl)-piperidin-1-ylmethyl]-4-(3-fluoro-phenyl)-pyrrolidin-1-yl]-3,3-dimethyl-butyric acid | IC50 | 0.2 nM |
| (R)-Cyclohexyl-[(2S,3S)-3-{4-[5-(4-cyclopropoxy-benzyl)-2-ethyl-2H-pyrazol-3-yl]-piperidin-1-ylmethyl}-4-(3-fluoro-phenyl)-pyrrolidin-1-yl]-acetic acid | IC50 | 0.2 nM |
| endo-methyl(S)-3-(3-(5-acetyl-2-methyl-4,5,6,7-tetrahydro-3H-imidazo[4,5-c]pyridin-3-yl)-8-azabicyclo[3.2.1]octan-8-yl)-1-(3-fluorophenyl)propylcarbamate | IC50 | 0.2 nM |
| endo-methyl 3-(8-((S)-3-(3-fluorophenyl)-3-(methoxycarbonylamino)propyl)-8-azabicyclo[3.2.1]octan-3-yl)-2-methyl-6,7-dihydro-3H-imidazo[4,5-c]pyridine-5(4H)-carboxylate | IC50 | 0.2 nM |
| CHEMBL1926893 | IC50 | 0.2 nM |
| (S)-(-)-8-{4-[2-(butoxy)ethoxy]phenyl}-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-N-(4-{[(1-propyl-1H-imidazol-5-yl)methyl]-sulfinyl}phenyl)-1,2,3,4-tetrahydro-1-benzazocine-5-carboxamide | IC50 | 0.21 nM |
| (R)-N-ethyl-N-(1-(3-(3-fluorophenyl)-3-(4-(methylsulfonyl)phenyl)propyl)piperidin-4-yl)-2-(4-(methylsulfonyl)phenyl)acetamide | IC50 | 0.22 nM |
| 2-{(S)-3-[4-(2-Benzyl-thiazol-5-yl)-piperidin-1-ylmethyl]-4-phenyl-pyrrolidin-1-yl}-3-cyclobutyl-propionic acid | IC50 | 0.23 nM |
| 2-{(S)-3-[4-(2-Benzyl-thiazol-5-yl)-piperidin-1-ylmethyl]-4-phenyl-pyrrolidin-1-yl}-3-cyclopropyl-propionic acid | IC50 | 0.23 nM |
| (R)-2-((3S,4S)-3-((4-(2-benzylthiazol-5-yl)piperidin-1-yl)methyl)-4-phenylpyrrolidin-1-yl)-3-cyclobutylpropanoic acid | IC50 | 0.23 nM |
| (R)-2-((3S,4S)-3-((4-(2-benzylthiazol-5-yl)piperidin-1-yl)methyl)-4-phenylpyrrolidin-1-yl)-3-cyclopropylpropanoic acid | IC50 | 0.23 nM |
| CHEMBL3577945 | IC50 | 0.24 nM |
| (S)-(-)-8-{4-[2-(butoxy)ethoxy]phenyl}-1-propyl-N-(4-{[(1-propyl-1H-imidazol-5-yl)methyl]sulfinyl}phenyl)-1,2,3,4-tetrahydro-1-benzazocine-5-carboxamide | IC50 | 0.24 nM |
| CHEMBL1951914 | IC50 | 0.26 nM |
ChEMBL bioactivities
3034 potent at pChembl≥5 of 3211 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 11.00 | IC50 | 0.01 | nM | CHEMBL311795 |
| 10.30 | IC50 | 0.05 | nM | CHEMBL460845 |
| 10.22 | IC50 | 0.06 | nM | CHEMBL21106 |
| 10.22 | IC50 | 0.06 | nM | CHEMBL181276 |
| 10.22 | IC50 | 0.05998 | nM | CHEMBL21106 |
| 10.15 | IC50 | 0.07 | nM | CHEMBL457043 |
| 10.10 | IC50 | 0.08 | nM | CHEMBL2164207 |
| 10.05 | IC50 | 0.09 | nM | CHEMBL1926899 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL20345 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL20896 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL2164210 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL2164202 |
| 10.00 | IC50 | 0.1 | nM | CENICRIVIROC MESYLATE |
| 10.00 | IC50 | 0.1 | nM | CHEMBL328445 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL316475 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL320386 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL93139 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL1649924 |
| 10.00 | Ki | 0.1 | nM | CHEMBL140484 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL102826 |
| 9.96 | IC50 | 0.11 | nM | CHEMBL2164217 |
| 9.89 | IC50 | 0.13 | nM | CHEMBL157491 |
| 9.86 | IC50 | 0.137 | nM | CHEMBL473558 |
| 9.80 | IC50 | 0.16 | nM | CHEMBL461687 |
| 9.77 | IC50 | 0.17 | nM | AZD-5363 |
| 9.74 | EC50 | 0.18 | nM | CHEMBL2372983 |
| 9.72 | IC50 | 0.19 | nM | CHEMBL3085308 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL171958 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL369235 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL21147 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL366770 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL173400 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL20622 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL174927 |
| 9.70 | IC50 | 0.2 | nM | CENICRIVIROC MESYLATE |
| 9.70 | IC50 | 0.2 | nM | MARAVIROC |
| 9.70 | IC50 | 0.2 | nM | CHEMBL319593 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL99909 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL329893 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL431852 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL1649926 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL1649927 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL102826 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL1926893 |
| 9.70 | IC50 | 0.2 | nM | CHEMBL322422 |
| 9.68 | IC50 | 0.21 | nM | CHEMBL3085309 |
| 9.66 | IC50 | 0.22 | nM | CHEMBL212731 |
| 9.64 | IC50 | 0.2301 | nM | CHEMBL520091 |
| 9.64 | IC50 | 0.2301 | nM | CHEMBL511493 |
| 9.64 | IC50 | 0.23 | nM | CHEMBL520091 |
PubChem BioAssay actives
2787 with measured affinity, of 3784 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| N-[(1S)-3-[4-[(3,4-dichlorophenyl)methylcarbamoyl-ethylamino]piperidin-1-yl]-1-phenylbutyl]cyclobutanecarboxamide | 393050: Antagonist activity at human recombinant CCR5 expressed in human HeLa-P4 cells assessed as inhibition of human HeLa-P4 cells binding to HIV1 gp160 expressing CHO cells by cell-cell fusion assay | ic50 | <0.0001 | uM |
| (4,6-dimethylpyrimidin-5-yl)-[4-methyl-4-[(3S)-3-methyl-4-[(1S)-1-[4-(trifluoromethyl)phenyl]ethyl]piperazin-1-yl]piperidin-1-yl]methanone | 42493: Inhibition of 0.1 nM of MIP-1beta induced migration of recombinant mouse pro-B cell line BA/F3 expressing human CCR5 | ic50 | <0.0001 | uM |
| (2R)-3-cyclopropyl-2-[(3S,4S)-3-[[4-[3,3-difluoro-3-(4-fluorophenyl)propyl]piperidin-1-yl]methyl]-4-(3-fluorophenyl)pyrrolidin-1-yl]propanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| (5E)-8-[4-(2-butoxyethoxy)phenyl]-1-(2-methylpropyl)-N-[4-[(S)-(3-propylimidazol-4-yl)methylsulfinyl]phenyl]-3,4-dihydro-2H-1-benzazocine-5-carboxamide;methanesulfonic acid | 261802: Inhibition of membrane fusion between HIV1 JR-FL Env-expressing COS7 cells and MOLT4/CCR5 | ic50 | 0.0001 | uM |
| N-[(1S)-1-(3-fluorophenyl)-3-[(1R,5S)-3-(2-methyl-5-propanoyl-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl)-8-azabicyclo[3.2.1]octan-8-yl]propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-3-[4-(3-methyl-5-propan-2-yl-1,2,4-triazol-4-yl)piperidin-1-yl]-1-phenylbutyl]cyclopentanecarboxamide | 395483: Antagonist activity at human recombinant CCR5 expressed in human HeLa-P4 cells assessed as inhibition of human HeLa-P4 cells binding to HIV1 gp160 expressing CHO cells by cell-cell fusion assay | ic50 | 0.0001 | uM |
| 6-chloro-2,4-dimethyl-N-[(3R)-3-[4-[[2-(2-oxo-1,3-oxazolidin-3-yl)acetyl]-(thiophen-3-ylmethyl)amino]piperidin-1-yl]butyl]pyridine-3-carboxamide | 696934: Antagonist activity at CCR5 receptor expressed in P4R5 cells co-expressing CD4, and LTR-beta-gal construct assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat cells expressing HIV-1 JRFLenv and HIV-1 Tat by beta-galactosidase activity based cell-cell fusion assay | ic50 | 0.0001 | uM |
| 2-chloro-6-cyano-N-[(3R)-3-[4-[methoxycarbamoyl(thiophen-3-ylmethyl)amino]piperidin-1-yl]butyl]-4-methylpyridine-3-carboxamide | 696934: Antagonist activity at CCR5 receptor expressed in P4R5 cells co-expressing CD4, and LTR-beta-gal construct assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat cells expressing HIV-1 JRFLenv and HIV-1 Tat by beta-galactosidase activity based cell-cell fusion assay | ic50 | 0.0001 | uM |
| 2,6-dichloro-N-[(3R)-3-[4-[methoxycarbamoyl(thiophen-3-ylmethyl)amino]piperidin-1-yl]butyl]-4-methylpyridine-3-carboxamide | 696934: Antagonist activity at CCR5 receptor expressed in P4R5 cells co-expressing CD4, and LTR-beta-gal construct assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat cells expressing HIV-1 JRFLenv and HIV-1 Tat by beta-galactosidase activity based cell-cell fusion assay | ic50 | 0.0001 | uM |
| (2S)-N-[(2S)-1-[[(2S,3R)-1-amino-3-hydroxy-1-oxobutan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]-2-[[(2S,3R)-2-[[(2S,3R)-2-[[(2S,3R)-2-[[(2S)-2-[[(2R)-2-aminopropanoyl]amino]-3-hydroxypropanoyl]amino]-3-hydroxybutanoyl]amino]-3-hydroxybutanoyl]amino]-3-hydroxybutanoyl]amino]butanediamide | 1928524: Antagonist activity at CCR5 (unknown origin) expressed in human HOS cells co-expressing HIV-1 FITC-gp120 Bal assessed inhibition of CD4 dependent gp120 Bal binding to CCR5 by western blot analysis | ic50 | 0.0001 | uM |
| (4-nitrophenyl)methyl N-[1-[(3S)-4-[benzenesulfonyl(methyl)amino]-3-methyl-3-phenylbutyl]piperidin-4-yl]-N-prop-2-enylcarbamate | 42496: Inhibitory concentration, binding towards C-C chemokine receptor type 5 using [125I]-MIP-1 alpha as radioligand expressed on CHO cells | ic50 | 0.0001 | uM |
| (2R)-3-cyclobutyl-2-[(3S,4S)-3-(3-fluorophenyl)-4-[[4-[2-(4-fluorophenyl)sulfanylethyl]piperidin-1-yl]methyl]pyrrolidin-1-yl]propanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| (2R)-3-cyclopropyl-2-[(3S,4S)-3-phenyl-4-[[4-(3-phenylpropyl)piperidin-1-yl]methyl]pyrrolidin-1-yl]propanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| (4-nitrophenyl)methyl N-[1-[[(3aS,4S,5S)-4-phenylspiro[3a,4,5,6-tetrahydro-3H-pyrrolo[1,2-b][1,2]oxazole-2,1’-cyclohexane]-5-yl]methyl]piperidin-4-yl]-N-prop-2-enylcarbamate | 42378: Ability to displace [125I]-labeled MIP-1alpha from the C-C chemokine receptor type 5 expressed on CHO cell membranes | ic50 | 0.0001 | uM |
| N-[(1S)-3-[4-[[2-(3,4-dichlorophenyl)acetyl]-ethylamino]piperidin-1-yl]-1-phenylbutyl]cyclobutanecarboxamide | 393050: Antagonist activity at human recombinant CCR5 expressed in human HeLa-P4 cells assessed as inhibition of human HeLa-P4 cells binding to HIV1 gp160 expressing CHO cells by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-3-[4-[ethyl-[2-(4-methylsulfonylphenyl)acetyl]amino]piperidin-1-yl]-1-phenylbutyl]cyclobutanecarboxamide | 393050: Antagonist activity at human recombinant CCR5 expressed in human HeLa-P4 cells assessed as inhibition of human HeLa-P4 cells binding to HIV1 gp160 expressing CHO cells by cell-cell fusion assay | ic50 | 0.0001 | uM |
| (4-nitrophenyl)methyl N-[1-[[(3S,4S)-1-benzyl-4-phenylpyrrolidin-3-yl]methyl]piperidin-4-yl]-N-prop-2-enylcarbamate | 1957048: Inhibition of human CCR5 | ic50 | 0.0001 | uM |
| (2R)-2-cyclohexyl-2-[(3S,4S)-3-phenyl-4-[[4-(3-phenylpropyl)piperidin-1-yl]methyl]pyrrolidin-1-yl]acetic acid | 42379: In vitro binding affinity at CCR5 receptor in the presence of [125I]-MIP-1 alpha. | ic50 | 0.0001 | uM |
| (2R)-2-cyclobutyl-2-[(3S,4S)-3-phenyl-4-[[4-(3-phenylpropyl)piperidin-1-yl]methyl]pyrrolidin-1-yl]acetic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| (2R)-3-cyclobutyl-2-[(3S,4S)-3-phenyl-4-[[4-(3-phenylpropyl)piperidin-1-yl]methyl]pyrrolidin-1-yl]propanoic acid | 241856: Displacement of [125I]-MIP-1 alpha from human C-C chemokine receptor type 5 expressed on CHO cell membranes | ic50 | 0.0001 | uM |
| methyl 1-[(1R,5S)-8-[(3S)-3-acetamido-3-(3-fluorophenyl)propyl]-8-azabicyclo[3.2.1]octan-3-yl]-2-methyl-6,7-dihydro-4H-imidazo[4,5-c]pyridine-5-carboxylate | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| propan-2-yl 3-[(1S,5R)-8-[(3S)-3-acetamido-3-phenylpropyl]-8-azabicyclo[3.2.1]octan-3-yl]-2-methyl-6,7-dihydro-4H-imidazo[4,5-c]pyridine-5-carboxylate | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-1-(3-fluorophenyl)-3-[(1R,5S)-3-(2-methyl-5-pyrimidin-4-yl-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl)-8-azabicyclo[3.2.1]octan-8-yl]propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-1-(3-fluorophenyl)-3-[(1R,5S)-3-(2-methyl-5-pyrazin-2-yl-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl)-8-azabicyclo[3.2.1]octan-8-yl]propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-3-[(1R,5S)-3-(5-acetyl-2-methyl-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl)-8-azabicyclo[3.2.1]octan-8-yl]-1-(3-fluorophenyl)propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-3-[(1R,5S)-3-(5-butanoyl-2-methyl-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl)-8-azabicyclo[3.2.1]octan-8-yl]-1-(3-fluorophenyl)propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-3-[(1R,5S)-3-[5-(2,2-dimethylpropanoyl)-2-methyl-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl]-8-azabicyclo[3.2.1]octan-8-yl]-1-(3-fluorophenyl)propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| methyl 3-[(1S,5R)-8-[(3S)-3-acetamido-3-(3-fluorophenyl)propyl]-8-azabicyclo[3.2.1]octan-3-yl]-2-methyl-6,7-dihydro-4H-imidazo[4,5-c]pyridine-5-carboxylate | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[(1S)-1-(3-fluorophenyl)-3-[(1R,5S)-3-[2-methyl-5-(2-methylpropanoyl)-6,7-dihydro-4H-imidazo[4,5-c]pyridin-1-yl]-8-azabicyclo[3.2.1]octan-8-yl]propyl]acetamide | 554132: Antagonist activity at CCR5 receptor expressed in HeLa-P4 cells co-expressing CD4 assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat10 cells after 20 hrs by cell-cell fusion assay | ic50 | 0.0001 | uM |
| N-[1-[(3R)-3-(3,5-dichlorophenyl)-3-(1-methylsulfonylpiperidin-4-yl)propyl]piperidin-4-yl]-N-ethyl-2-(4-methylsulfonylphenyl)acetamide | 645643: Displacement of [125I]MIP-1alpha from human recombinant CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| N-ethyl-2-(4-methylsulfonylphenyl)-N-[1-[(3R)-3-phenyl-3-[1-(trifluoromethylsulfonyl)piperidin-4-yl]propyl]piperidin-4-yl]acetamide | 645643: Displacement of [125I]MIP-1alpha from human recombinant CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| N-[1-[(3R)-3-(3,5-dimethylphenyl)-3-(1-methylsulfonylpiperidin-4-yl)propyl]piperidin-4-yl]-N-ethyl-2-(4-methylsulfonylphenyl)acetamide | 645643: Displacement of [125I]MIP-1alpha from human recombinant CCR5 expressed in CHO cells | ic50 | 0.0001 | uM |
| 5-N-[(3R)-3-[4-[4-methoxy-N-[(4-methyl-3-pyridinyl)methyl]anilino]piperidin-1-yl]butyl]-4,6-dimethyl-2-N-propan-2-ylpyridine-2,5-dicarboxamide | 635152: Antagonist activity against human CCR5 assessed as inhibition of HIV1 gp120-induced cell-cell fusion between human HeLa P4/R5 cells and CHO-tat10 cells expressing HIV-1JRFL viral envolop protein after 20 hrs by beta-galactosidase reporter gene assay | ic50 | 0.0001 | uM |
| 6-chloro-2,4-dimethyl-N-[(3R)-3-[4-[pyridin-3-ylcarbamoyl(thiophen-3-ylmethyl)amino]piperidin-1-yl]butyl]pyridine-3-carboxamide | 696934: Antagonist activity at CCR5 receptor expressed in P4R5 cells co-expressing CD4, and LTR-beta-gal construct assessed as inhibition of infusion to HIV gp120 expressed in CHO-tat cells expressing HIV-1 JRFLenv and HIV-1 Tat by beta-galactosidase activity based cell-cell fusion assay | ic50 | 0.0001 | uM |
| [4-[4-[(E)-C-(4-bromophenyl)-N-ethoxycarbonimidoyl]piperidin-1-yl]-4-methylpiperidin-1-yl]-(2,6-dimethyl-4-pyridin-4-ylphenyl)methanone | 42506: Inhibition of RANTES binding to the human C-C chemokine receptor type 5 (CCR5) | ki | 0.0001 | uM |
| 1-[[(3S,4S)-1-(cyclohexylmethyl)-4-phenylpyrrolidin-3-yl]methyl]-4-[3-[4-(2H-tetrazol-5-yl)phenyl]propyl]piperidin-4-ol | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0002 | uM |
| (5E)-8-[4-(2-butoxyethoxy)phenyl]-1-[(1-methylpyrazol-4-yl)methyl]-N-[4-[(S)-(3-propylimidazol-4-yl)methylsulfinyl]phenyl]-3,4-dihydro-2H-1-benzazocine-5-carboxamide | 261802: Inhibition of membrane fusion between HIV1 JR-FL Env-expressing COS7 cells and MOLT4/CCR5 | ic50 | 0.0002 | uM |
| (5E)-8-[4-(2-butoxyethoxy)phenyl]-1-(2-methylpropyl)-N-[4-[(S)-(4-propyl-1,2,4-triazol-3-yl)methylsulfinyl]phenyl]-3,4-dihydro-2H-1-benzazocine-5-carboxamide | 261802: Inhibition of membrane fusion between HIV1 JR-FL Env-expressing COS7 cells and MOLT4/CCR5 | ic50 | 0.0002 | uM |
| 6-chloro-N-[(3R)-3-[4-[4-methoxy-N-[(4-methyl-3-pyridinyl)methyl]anilino]piperidin-1-yl]butyl]-2,4-dimethylpyridine-3-carboxamide | 635152: Antagonist activity against human CCR5 assessed as inhibition of HIV1 gp120-induced cell-cell fusion between human HeLa P4/R5 cells and CHO-tat10 cells expressing HIV-1JRFL viral envolop protein after 20 hrs by beta-galactosidase reporter gene assay | ic50 | 0.0002 | uM |
| 4,4-difluoro-N-[(1S)-3-[(1S,5R)-3-(3-methyl-5-propan-2-yl-1,2,4-triazol-4-yl)-8-azabicyclo[3.2.1]octan-8-yl]-1-phenylpropyl]cyclohexane-1-carboxamide | 1370975: Inhibition of CCR5 in human TZM-bl cells infected with HIV1 Bal R5 assessed as antiviral activity by measuring reduction in viral infection pre-incubated with cells followed by viral infection measured after 3 days by luciferase reporter gene assay | ic50 | 0.0002 | uM |
| (2R)-2-[(3S,4S)-3-[[4-(2-benzyl-1,3-thiazol-5-yl)piperidin-1-yl]methyl]-4-phenylpyrrolidin-1-yl]-3-cyclopropylpropanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0002 | uM |
| (2R)-2-[(3S,4S)-3-[[4-(2-benzyl-1,3-thiazol-5-yl)piperidin-1-yl]methyl]-4-phenylpyrrolidin-1-yl]-3-cyclobutylpropanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0002 | uM |
| (2R)-3-cyclobutyl-2-[(3S,4S)-3-(3-fluorophenyl)-4-[[4-[3-[4-(trifluoromethyl)phenyl]propyl]piperidin-1-yl]methyl]pyrrolidin-1-yl]propanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0002 | uM |
| (2R)-3-cyclobutyl-2-[(3S,4S)-3-[[4-[3,3-difluoro-3-(4-fluorophenyl)propyl]piperidin-1-yl]methyl]-4-phenylpyrrolidin-1-yl]propanoic acid | 352100: Displacement of [125I]MIP1alpha from human CCR5 expressed in CHO cells | ic50 | 0.0002 | uM |
| 1-[[(3S,4S)-1-(cyclohexylmethyl)-4-phenylpyrrolidin-3-yl]methyl]-4-[3-[4-(1-methyltetrazol-5-yl)phenyl]propyl]piperidin-4-ol | 42380: Displacement of [125I]-labeled MIP-1alpha from the C-C chemokine receptor type 5 expressed on CHO cell membranes | ic50 | 0.0002 | uM |
| 2-[(3S)-3-[[4-(2-benzyl-1,3-thiazol-5-yl)piperidin-1-yl]methyl]-4-phenylpyrrolidin-1-yl]-3-cyclobutylpropanoic acid | 42495: Inhibition of human C-C chemokine receptor type 5 assayed using [125I]-MIP-1 alpha as radioligand | ic50 | 0.0002 | uM |
| 2-[(3S)-3-[[4-(2-benzyl-1,3-thiazol-5-yl)piperidin-1-yl]methyl]-4-phenylpyrrolidin-1-yl]-3-cyclopropylpropanoic acid | 42495: Inhibition of human C-C chemokine receptor type 5 assayed using [125I]-MIP-1 alpha as radioligand | ic50 | 0.0002 | uM |
| N-[(1S)-3-[4-[benzylcarbamoyl(ethyl)amino]piperidin-1-yl]-1-phenylbutyl]cyclobutanecarboxamide | 393050: Antagonist activity at human recombinant CCR5 expressed in human HeLa-P4 cells assessed as inhibition of human HeLa-P4 cells binding to HIV1 gp160 expressing CHO cells by cell-cell fusion assay | ic50 | 0.0002 | uM |
| (4-nitrophenyl)methyl N-[1-[[(3S,4S)-1-benzoyl-4-phenylpyrrolidin-3-yl]methyl]piperidin-4-yl]-N-prop-2-enylcarbamate | 42496: Inhibitory concentration, binding towards C-C chemokine receptor type 5 using [125I]-MIP-1 alpha as radioligand expressed on CHO cells | ic50 | 0.0002 | uM |
| (4-nitrophenyl)methyl N-[1-[[(3S,4S)-1-(cyclopentanecarbonyl)-4-phenylpyrrolidin-3-yl]methyl]piperidin-4-yl]-N-prop-2-enylcarbamate | 42496: Inhibitory concentration, binding towards C-C chemokine receptor type 5 using [125I]-MIP-1 alpha as radioligand expressed on CHO cells | ic50 | 0.0002 | uM |
CTD chemical–gene interactions
59 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Maraviroc | decreases reaction, increases expression, affects binding, decreases activity | 3 |
| Benzo(a)pyrene | affects methylation, increases expression | 2 |
| Eugenol | increases expression | 2 |
| Nickel | affects expression, increases expression, decreases reaction | 2 |
| Simvastatin | decreases expression, decreases reaction, increases expression | 2 |
| GSK-J4 | decreases expression | 1 |
| isopentenyl pyrophosphate | decreases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| captax | increases expression | 1 |
| trichostatin A | affects expression, decreases reaction | 1 |
| proanthocyanidin | decreases expression | 1 |
| indole-3-carbinol | increases expression | 1 |
| 3-chlorophenol | decreases expression | 1 |
| 2,4-dinitrofluorobenzene sulfonic acid | increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one | affects binding, decreases reaction, increases activity, increases expression | 1 |
| enniatins | decreases expression | 1 |
| cirsimarin | decreases expression | 1 |
| TAK 779 | affects binding, decreases reaction | 1 |
| N-(oxo-5,6-dihydrophenanthridin-2-yl)-N,N-dimethylacetamide hydrochloride | decreases expression, decreases reaction, affects cotreatment | 1 |
| Ancriviroc | affects binding, decreases reaction | 1 |
| bardoxolone methyl | increases expression, increases reaction | 1 |
| vicriviroc | affects binding, decreases reaction | 1 |
| aplaviroc | affects binding, decreases reaction | 1 |
| PF 232798 | affects binding, decreases activity | 1 |
| bisphenol S | decreases methylation | 1 |
| gardiquimod | increases expression, decreases reaction | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
ChEMBL screening assays
409 unique, capped per target: 243 binding, 166 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1000791 | Binding | Displacement of [125I]gp-120 from human CCR5 receptor expressed in CHO cells | Isolation and structure of antagonists of chemokine receptor (CCR5). — *J Nat Prod* |
| CHEMBL1055686 | Functional | Inhibition of human CCR5 expressed in mouse B300-19 cells assessed as inhibition of RANTES-induced calcium flux at 10 uM | Synthesis, biological evaluation, and metabolic stability of acrylamide derivatives as novel CCR3 antagonists. — *Bioorg Med Chem* |
Cellosaurus cell lines
61 cell lines: 45 cancer cell line, 6 spontaneously immortalized cell line, 5 transformed cell line, 5 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_0C87 | MOCHA | Cancer cell line | Male |
| CVCL_1D98 | HOS-CD4-CCR5 | Cancer cell line | Female |
| CVCL_1E08 | GHOST(3).R3/X4/R5 | Cancer cell line | Female |
| CVCL_1E10 | GHOST(3).X4/R5 | Cancer cell line | Female |
| CVCL_1E15 | 3T3.T4.CCR5 | Transformed cell line | Male |
| CVCL_1E17 | GHOST(3).Hi-5 | Cancer cell line | Female |
| CVCL_1F85 | U373-MAGI-CCR5 | Cancer cell line | Male |
| CVCL_1G50 | Cf2Th-CCR5 | Spontaneously immortalized cell line | Female |
| CVCL_1H19 | HOS-CCR5 | Cancer cell line | Female |
| CVCL_1H21 | HeLa-P4-R5 MAGI | Cancer cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for CCR5 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Targeted by drugs: Aplaviroc, Cenicriviroc, Leronlimab, Maraviroc, Vicriviroc
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): celiac disease, hepatitis C virus, susceptibility to, susceptibility to HIV infection, type 1 diabetes mellitus, type 1 diabetes mellitus 22, West Nile virus, susceptibility to