CCSER1-AS1

Summary

CCSER1-AS1 (CCSER1 antisense RNA 1, HGNC:58853) is a long non-coding RNA gene on chromosome 4q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58853
Approved symbol	CCSER1-AS1
Name	CCSER1 antisense RNA 1
Location	4q22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249049
Ensembl biotype	lncRNA
Entrez	124900733

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000502368

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502368 — 3 exons

Exon	Start	End
ENSE00002032489	91325114	91325306
ENSE00002047666	91319645	91319726
ENSE00002070348	91319034	91319133

Expression profiles

Bgee: expression breadth broad, 87 present calls, max score 97.62.

Top tissues by expression

87 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right uterine tube	UBERON:0001302	97.62	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.50	gold quality
endometrium	UBERON:0001295	85.98	gold quality
fallopian tube	UBERON:0003889	78.30	gold quality
endocervix	UBERON:0000458	77.19	gold quality
corpus callosum	UBERON:0002336	71.80	gold quality
left uterine tube	UBERON:0001303	65.81	gold quality
smooth muscle tissue	UBERON:0001135	64.17	gold quality
gall bladder	UBERON:0002110	63.67	gold quality
cortex of kidney	UBERON:0001225	63.21	gold quality
kidney	UBERON:0002113	62.51	gold quality
calcaneal tendon	UBERON:0003701	62.08	gold quality
metanephros cortex	UBERON:0010533	60.25	gold quality
myometrium	UBERON:0001296	59.32	gold quality
adult mammalian kidney	UBERON:0000082	58.84	gold quality
body of uterus	UBERON:0009853	58.81	gold quality
prefrontal cortex	UBERON:0000451	58.73	gold quality
blood	UBERON:0000178	57.59	gold quality
placenta	UBERON:0001987	57.19	gold quality
stomach	UBERON:0000945	57.02	gold quality
vermiform appendix	UBERON:0001154	56.20	gold quality
islet of Langerhans	UBERON:0000006	55.86	gold quality
monocyte	CL:0000576	55.43	gold quality
primary visual cortex	UBERON:0002436	55.30	gold quality
sural nerve	UBERON:0015488	53.73	silver quality
ovary	UBERON:0000992	52.88	gold quality
body of stomach	UBERON:0001161	52.31	gold quality
left ovary	UBERON:0002119	52.28	gold quality
body of pancreas	UBERON:0001150	52.11	gold quality
multicellular organism	UBERON:0000468	51.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.97

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.