CCT5-AS1

Summary

CCT5-AS1 (CCT5 antisense RNA 1, HGNC:58210) is a long non-coding RNA gene on chromosome 5p15.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58210
Approved symbol	CCT5-AS1
Name	CCT5 antisense RNA 1
Location	5p15.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000271980
Ensembl biotype	lncRNA
Entrez	139281651
RNAcentral	URS00004B7371 — lncRNA, 2550 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000606194

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000606194 — 1 exons

Exon	Start	End
ENSE00003701797	10264597	10267146

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 80.78.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	80.78	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	65.60	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.14	gold quality
ventricular zone	UBERON:0003053	64.78	gold quality
skeletal muscle tissue	UBERON:0001134	63.98	gold quality
mucosa of transverse colon	UBERON:0004991	63.45	gold quality
right lobe of liver	UBERON:0001114	62.20	gold quality
liver	UBERON:0002107	60.91	gold quality
ganglionic eminence	UBERON:0004023	60.58	gold quality
muscle tissue	UBERON:0002385	59.74	gold quality
adult mammalian kidney	UBERON:0000082	59.39	gold quality
stromal cell of endometrium	CL:0002255	58.88	gold quality
endometrium	UBERON:0001295	58.08	gold quality
kidney	UBERON:0002113	57.92	gold quality
primary visual cortex	UBERON:0002436	56.82	gold quality
monocyte	CL:0000576	56.55	gold quality
muscle of leg	UBERON:0001383	55.86	gold quality
cortex of kidney	UBERON:0001225	55.40	gold quality
gastrocnemius	UBERON:0001388	55.39	gold quality
blood	UBERON:0000178	55.23	gold quality
granulocyte	CL:0000094	55.11	gold quality
adrenal tissue	UBERON:0018303	54.69	gold quality
right ovary	UBERON:0002118	53.66	gold quality
left adrenal gland cortex	UBERON:0035825	52.73	gold quality
prefrontal cortex	UBERON:0000451	52.70	gold quality
right adrenal gland cortex	UBERON:0035827	52.29	gold quality
amygdala	UBERON:0001876	51.67	gold quality
transverse colon	UBERON:0001157	51.65	gold quality
lower esophagus mucosa	UBERON:0035834	51.56	gold quality
left adrenal gland	UBERON:0001234	51.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.