CD101-AS1

Summary

CD101-AS1 (CD101 antisense RNA 1, HGNC:55665) is a long non-coding RNA gene on chromosome 1p13.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55665
Approved symbol	CD101-AS1
Name	CD101 antisense RNA 1
Location	1p13.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236137
Ensembl biotype	lncRNA
Entrez	101929099
RNAcentral	URS000002C3A3 — lncRNA, 1814 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000421254, ENST00000445523, ENST00000728484, ENST00000728485, ENST00000728486, ENST00000728487, ENST00000728488, ENST00000728489, ENST00000728490, ENST00000728491, ENST00000728492, ENST00000728493, ENST00000728494, ENST00000728495, ENST00000728496, ENST00000728497

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000421254 — 3 exons

Exon	Start	End
ENSE00004055008	117025481	117026786
ENSE00004055024	117032390	117032587
ENSE00004055030	117059373	117059488

Expression profiles

Bgee: expression breadth ubiquitous, 121 present calls, max score 93.40.

Top tissues by expression

121 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	93.40	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	82.72	gold quality
bone marrow cell	CL:0002092	67.12	silver quality
monocyte	CL:0000576	65.30	gold quality
bone marrow	UBERON:0002371	65.26	gold quality
body of pancreas	UBERON:0001150	63.63	gold quality
ganglionic eminence	UBERON:0004023	63.28	gold quality
pancreas	UBERON:0001264	63.17	gold quality
islet of Langerhans	UBERON:0000006	61.99	gold quality
rectum	UBERON:0001052	61.11	gold quality
duodenum	UBERON:0002114	59.99	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.55	gold quality
tonsil	UBERON:0002372	59.22	gold quality
mucosa of transverse colon	UBERON:0004991	58.18	gold quality
ventricular zone	UBERON:0003053	58.14	silver quality
endometrium	UBERON:0001295	57.60	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.51	gold quality
transverse colon	UBERON:0001157	55.41	gold quality
vermiform appendix	UBERON:0001154	54.29	gold quality
superior frontal gyrus	UBERON:0002661	53.99	gold quality
prefrontal cortex	UBERON:0000451	53.85	gold quality
esophagus mucosa	UBERON:0002469	53.57	gold quality
right adrenal gland cortex	UBERON:0035827	53.56	gold quality
blood	UBERON:0000178	53.48	gold quality
stromal cell of endometrium	CL:0002255	53.38	silver quality
saliva-secreting gland	UBERON:0001044	52.99	gold quality
small intestine	UBERON:0002108	52.96	gold quality
granulocyte	CL:0000094	52.89	gold quality
lymph node	UBERON:0000029	52.64	gold quality
right adrenal gland	UBERON:0001233	52.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.25

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.