CD109-AS1

Summary

CD109-AS1 (CD109 antisense RNA 1, HGNC:55765) is a long non-coding RNA gene on chromosome 6q13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55765
Approved symbol	CD109-AS1
Name	CD109 antisense RNA 1
Location	6q13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231652
Ensembl biotype	lncRNA
Entrez	101928489
RNAcentral	URS0000063A17 — lncRNA, 1973 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000428865, ENST00000797627, ENST00000797628, ENST00000797629, ENST00000797630, ENST00000797631

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428865 — 2 exons

Exon	Start	End
ENSE00004184497	73695832	73696297
ENSE00004184501	73693862	73695575

Expression profiles

Bgee: expression breadth ubiquitous, 115 present calls, max score 75.51.

Top tissues by expression

115 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.51	silver quality
stromal cell of endometrium	CL:0002255	63.19	gold quality
calcaneal tendon	UBERON:0003701	62.82	gold quality
cortical plate	UBERON:0005343	62.73	gold quality
smooth muscle tissue	UBERON:0001135	61.44	gold quality
ganglionic eminence	UBERON:0004023	58.84	silver quality
ventricular zone	UBERON:0003053	58.46	silver quality
right atrium auricular region	UBERON:0006631	58.20	gold quality
monocyte	CL:0000576	57.64	gold quality
descending thoracic aorta	UBERON:0002345	56.84	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	56.35	gold quality
skeletal muscle tissue	UBERON:0001134	55.33	silver quality
myometrium	UBERON:0001296	54.73	gold quality
bone marrow	UBERON:0002371	54.59	gold quality
heart	UBERON:0000948	54.25	gold quality
prefrontal cortex	UBERON:0000451	53.44	gold quality
urinary bladder	UBERON:0001255	52.96	gold quality
body of uterus	UBERON:0009853	52.81	gold quality
heart left ventricle	UBERON:0002084	51.93	gold quality
placenta	UBERON:0001987	51.59	gold quality
thoracic aorta	UBERON:0001515	51.58	gold quality
endometrium	UBERON:0001295	51.43	gold quality
nucleus accumbens	UBERON:0001882	51.23	gold quality
ascending aorta	UBERON:0001496	51.20	gold quality
muscle layer of sigmoid colon	UBERON:0035805	50.90	gold quality
popliteal artery	UBERON:0002250	50.84	gold quality
tibial artery	UBERON:0007610	50.81	gold quality
duodenum	UBERON:0002114	50.49	gold quality
lower esophagus	UBERON:0013473	50.27	gold quality
lower esophagus muscularis layer	UBERON:0035833	50.21	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.26

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.