CD14

gene
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Summary

CD14 (CD14 molecule, HGNC:1628) is a protein-coding gene on chromosome 5q31.3, encoding Monocyte differentiation antigen CD14 (P08571). Coreceptor for bacterial lipopolysaccharide.

The protein encoded by this gene is a surface antigen that is preferentially expressed on monocytes/macrophages. It cooperates with other proteins to mediate the innate immune response to bacterial lipopolysaccharide, and to viruses. This gene has been identified as a target candidate in the treatment of SARS-CoV-2-infected patients to potentially lessen or inhibit a severe inflammatory response. Alternative splicing results in multiple transcript variants encoding the same protein.

Source: NCBI Gene 929 — RefSeq curated summary.

At a glance

  • GWAS associations: 4
  • Clinical variants (ClinVar): 54 total
  • Druggable target: yes
  • MANE Select transcript: NM_000591

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:1628
Approved symbolCD14
NameCD14 molecule
Location5q31.3
Locus typegene with protein product
StatusApproved
Ensembl geneENSG00000170458
Ensembl biotypeprotein_coding
OMIM158120
Entrez929

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 protein_coding

ENST00000302014, ENST00000498971, ENST00000512545, ENST00000519715, ENST00000905960

RefSeq mRNA: 4 — MANE Select: NM_000591 NM_000591, NM_001040021, NM_001174104, NM_001174105

CCDS: CCDS4232

Canonical transcript exons

ENST00000302014 — 2 exons

ExonStartEnd
ENSE00002058600140633069140633175
ENSE00003848313140631732140632980

Expression profiles

Bgee: expression breadth ubiquitous, 274 present calls, max score 99.75.

FANTOM5 (CAGE): breadth broad, TPM avg 40.2215 / max 1789.9405, expressed in 662 samples.

FANTOM5 promoters (7 alternative TSS)

Promoter IDTPM avgSamples expressed
6381626.0982567
6381712.6097524
638200.7860192
638210.3485126
638150.162387
638180.121561
638190.095451

Top tissues by expression

295 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
monocyteCL:000057699.75gold quality
mononuclear cellCL:000084299.71gold quality
leukocyteCL:000073899.68gold quality
granulocyteCL:000009499.42gold quality
right lobe of liverUBERON:000111498.67gold quality
right coronary arteryUBERON:000162598.30gold quality
bloodUBERON:000017898.17gold quality
liverUBERON:000210798.02gold quality
left adrenal glandUBERON:000123497.94gold quality
left adrenal gland cortexUBERON:003582597.68gold quality
right adrenal glandUBERON:000123397.46gold quality
synovial jointUBERON:000221797.39gold quality
gall bladderUBERON:000211097.36gold quality
adrenal cortexUBERON:000123597.11gold quality
layer of synovial tissueUBERON:000761697.11gold quality
deciduaUBERON:000245097.05gold quality
right adrenal gland cortexUBERON:003582796.99gold quality
placentaUBERON:000198796.91gold quality
upper lobe of left lungUBERON:000895296.57gold quality
periodontal ligamentUBERON:000826696.40gold quality
right lungUBERON:000216796.32gold quality
upper lobe of lungUBERON:000894896.30gold quality
vermiform appendixUBERON:000115495.97gold quality
adrenal glandUBERON:000236995.72gold quality
minor salivary glandUBERON:000183095.68gold quality
pericardiumUBERON:000240795.63gold quality
saliva-secreting glandUBERON:000104495.47gold quality
descending thoracic aortaUBERON:000234595.24gold quality
omental fat padUBERON:001041495.23gold quality
peritoneumUBERON:000235895.22gold quality

Single-cell (SCXA)

Detected in 36 experiment(s), a significant marker in 35.

ExperimentMarker?Max mean expression
E-MTAB-6678yes5316.00
E-MTAB-6701yes3913.61
E-HCAD-24yes3401.14
E-MTAB-10855yes2861.82
E-MTAB-8498yes2686.78
E-MTAB-8530yes2205.89
E-HCAD-36yes2183.57
E-MTAB-7407yes1630.19
E-MTAB-9801yes1499.69
E-GEOD-149689yes1486.79
E-HCAD-32yes1099.81
E-MTAB-10885yes966.10
E-CURD-112yes959.58
E-MTAB-7381yes794.10
E-ANND-5yes602.23

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AP1, CEBPB, CEBPG, CREB1, CTNNB1, FOS, FOSB, HOXC4, IRF6, KLF4, MEF2A, MEF2D, NFKB, PPARG, SP1, SP2, SP3, SPI1, STAT1, VDR, WT1

miRNA regulators (miRDB)

8 targeting CD14, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-365899.9673.874379
HSA-MIR-3151-5P99.8663.831069
HSA-MIR-34B-5P99.7867.561175
HSA-MIR-449C-5P99.7867.631168
HSA-MIR-92A-2-5P99.7567.012164
HSA-MIR-2682-5P99.7367.381055
HSA-MIR-4786-3P99.3668.351390
HSA-MIR-296-3P99.2166.56474

Literature-anchored findings (GeneRIF, showing 40)

  • The roles of crc and dimmed genes on the expression of diverse hormones in D. melanogaster and reported. (PMID:16651547)
  • Cryptocephal, the Drosophila melanogaster ATF4, is a specific coactivator for ecdysone receptor isoform B2. (PMID:22912598)
  • GCN2 and ATF4 are important regulators of 4E-BP transcription during normal drosophila development and aging. (PMID:27979906)
  • ATF4 regulates the expression of one-carbon metabolism genes SHMT2 and NMDMC as a protective response to mitochondrial toxicity. (PMID:28211874)
  • ATF4 activation reprograms nuclear gene expression and contributes to neuronal dysfunction (PMID:31645461)
  • Roles of C/EBP class bZip proteins in the growth and cell competition of Rp (‘Minute’) mutants in Drosophila. (PMID:31909714)
  • ATF4-Induced Warburg Metabolism Drives Over-Proliferation in Drosophila. (PMID:32433968)
  • Translational induction of ATF4 during integrated stress response requires noncanonical initiation factors eIF2D and DENR. (PMID:32938929)
  • CD14-dependent activation of NF-kappaB by filarial parasitic sheath proteins (PMID:11779220)
  • Data suggest that soluble lipopolysaccharide receptor CD14 (sCD14) elevation is associated with the development of multiple organ dysfunction syndrome (MODS) after major burns. (PMID:11825494)
  • results suggest that the enhanced CD14 expression in psoriasis is not attributable to functional variants of CD14 (-159C/T) (PMID:11841490)
  • IFN-gamma primed CD14(high) human gingival fibroblasts to enhance production of IL-8 in response to LPS through augmentation of the CD14-TLR system (PMID:11854210)
  • The important host receptor CD14 is partially implicated in TNF, IL-1, IL-6 and MCP-1 production, while CD14-independent pathways seem to be responsible for IL-8 production after S. suis stimulation. (PMID:11876746)
  • Though Cd14 is known to faciitate binding of several bacterial ligands to TLR, no role could be found for CD14 in C. pneumoniae binding. (PMID:11932927)
  • No association between the CD14 C(-260)T and CD18 codon 441 gene polymorphisms and the incidence of stroke was found in a large, prospective, matched case-control sample from the Physicians’ Health Study. (PMID:11935032)
  • CD14 polymorphism is associated with smoking dependence (PMID:12011764)
  • Human proteinase 3 can inhibits LPS-mediated TNF-alpha production through CD14 degradation (PMID:12067299)
  • plasma factor LBP and cell surface receptor CD14 were necessary for LPS activation of p38, which was tightly associated with LPS priming of the PMN respiratory burst (PMID:12117913)
  • TT genotype of CD14 associated with risk of atherosclerotic or microangiopathic stroke (PMID:12140663)
  • CD14 has a role in mediating signaling responses to Aspergillus fumigatus (PMID:12171914)
  • Data show that the TLR4-mediated LPS response in bladder epithelial cells also uses the co-receptor CD14 for efficient LPS signalling. (PMID:12174084)
  • Porphyromonas gingivalis fimbriae activate human peripheral blood monocytes utilizing TLR2, CD14 and CD11a/CD18 as cellular receptors. (PMID:12207338)
  • Lipopolysaccharide rapidly traffics to and from the Golgi apparatus with the toll-like receptor 4-MD-2-CD14 complex (PMID:12324469)
  • some heat-stable component of P. gingivalis, including LPS, may be responsible for the induction of IL-8 and MCP-1 in HUVECs by a CD14-dependent mechanism (PMID:12410798)
  • lipopolysaccharide may induce proliferation of periodontal epithelial cells by upregulating keratinocyte growth factor 1 expression via the CD14 and Toll-like receptor signaling pathway (PMID:12438323)
  • innate immune recognition of LTA via LBP, CD14, and TLR-2 represents an important mechanism in the pathogenesis of systemic complications in the course of infectious diseases brought about by Gram-positive pathogens. while TLR-4 and MD-2 are not involved. (PMID:12594207)
  • The CD14 -159C/T polymorphism is associated with increased common carotid artery intima-media thickness in smokers (PMID:12624278)
  • Human cytomegalovirus activates inflammatory cytokine responses via CD14 and Toll-like receptor 2 (PMID:12663765)
  • first study to suggest an effect of a genetic polymorphism of the CD14 gene on both insulin sensitivity (healthy subjects and type 2 diabetic patients) and endothelial dysfunction (sICAM-1 levels) in type 2 diabetes mellitus (PMID:12679473)
  • CD14 is not critical for phosphatidylserine-induced apoptosis in human macrophages (PMID:12700637)
  • a new functional role of CD55 as a member of a multimeric LPS receptor complex. (PMID:12731067)
  • data support the hypothesis that lipopolysaccharide binding protein can inhibit cell responses to lipopolysaccharide(LPS) by inhibiting LPS transfer from membrane CD14 to the Toll-like receptor 4-MD-2 signaling receptor (PMID:12754215)
  • data suggest that peripheral blood cells are of negligible importance in LPS-induced production of inflammatory mediators in vivo and that LPS may activate genes via a CD14-independent pathway that is slower and less efficient (PMID:12757265)
  • A significant association between the CD14 TT genotype and C. pneumoniae infection was found. (PMID:12825176)
  • there may be a resistive exercise training-induced reduction in TLR4/CD14 expression in older women (PMID:12832426)
  • results provided experimental evidence for existence of close association between CD14 and HIV coreceptor CXCR4 on human monocytic cells (PMID:12853157)
  • The TT genotype of -159 C–>T CD14 is associated with nonatopic asthma and food allergy, particularly in white subjects. Thus CD14 is a candidate gene specifically for nonatopic asthma and not for asthma in general (PMID:12897754)
  • The polymorphic maeker C-159T of CD14 was associated with serum total IgE concentration in atopic Chinese children. (PMID:12911501)
  • increased serum levels in chronic Hepatitis B and C patients and inversely correlated with HBsAg in chronic Hepatitis B (PMID:12938192)
  • Results show that the surface receptors TLR2/4 and CD14 are essential for in vitro cellular activation induced by Neisseria meningitidis lipopolysaccharide-containing outer membrane vesicles and purified lipopolysaccharides. (PMID:12942028)

Cross-species orthologs

2 orthologs

OrganismSymbolGene ID
mus_musculusCd14ENSMUSG00000051439
rattus_norvegicusCd14ENSRNOG00000017819

Protein

Protein identifiers

Monocyte differentiation antigen CD14P08571 (reviewed: P08571)

Alternative names: My23 antigen, Myeloid cell-specific leucine-rich glycoprotein

All UniProt accessions (4): P08571, D6RD81, D6RFL4, E7EVL5

UniProt curated annotations — full annotation on UniProt →

Function. Coreceptor for bacterial lipopolysaccharide. In concert with LBP, binds to monomeric lipopolysaccharide and delivers it to the LY96/TLR4 complex, thereby mediating the innate immune response to bacterial lipopolysaccharide (LPS). Acts via MyD88, TIRAP and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response. Acts as a coreceptor for TLR2:TLR6 heterodimer in response to diacylated lipopeptides and for TLR2:TLR1 heterodimer in response to triacylated lipopeptides, these clusters trigger signaling from the cell surface and subsequently are targeted to the Golgi in a lipid-raft dependent pathway. Binds electronegative LDL (LDL(-)) and mediates the cytokine release induced by LDL(-).

Subunit / interactions. Interacts with LPS-bound LPB. Belongs to the lipopolysaccharide (LPS) receptor, a multi-protein complex containing at least CD14, LY96 and TLR4. Interacts with LPAR1. Interacts with the TLR2:TLR6 or TLR2:TLR1 heterodimers; upon interaction with ligands such as diacylated lipopeptides and triacylated lipopeptides, respectively. Interacts with MYO18A. Interacts with FSTL1.

Subcellular location. Cell membrane. Secreted. Membrane raft. Golgi apparatus.

Tissue specificity. Detected on macrophages (at protein level). Expressed strongly on the surface of monocytes and weakly on the surface of granulocytes; also expressed by most tissue macrophages.

Post-translational modifications. N- and O- glycosylated. O-glycosylated with a core 1 or possibly core 8 glycan.

Domain organisation. The C-terminal leucine-rich repeat (LRR) region is required for responses to smooth LPS.

Induction. The expression in monocytes is highly induced by 27-hydroxycholesterol, priming monocytes/macrophages such that LPS-mediated inflammatory reaction is accelerated. Secretion of soluble CD14 is also enhanced.

RefSeq proteins (4): NP_000582, NP_001035110, NP_001167575, NP_001167576 (=MANE)

Domains & families (InterPro)

IDNameType
IPR001611Leu-rich_rptRepeat
IPR016337Monocyte_diff_Ag_CD14Family
IPR032675LRR_dom_sfHomologous_superfamily

Pfam: PF13516

UniProt features (30 total): repeat 11, glycosylation site 5, disulfide bond 4, chain 2, sequence variant 2, sequence conflict 2, signal peptide 1, region of interest 1, lipid moiety-binding region 1, propeptide 1

Structure

Experimental structures (PDB)

1 structures.

PDBMethodResolution (Å)
4GLPX-RAY DIFFRACTION4

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P08571-F185.360.72

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (1): 345

Disulfide bonds (4): 25–36, 34–51, 187–217, 241–272

Glycosylation sites (5): 37, 151, 282, 323, 336

Function

Pathways and Gene Ontology

Reactome pathways

42 pathways

IDPathway
R-HSA-1236974ER-Phagosome pathway
R-HSA-140534Caspase activation via Death Receptors in the presence of ligand
R-HSA-166016Toll Like Receptor 4 (TLR4) Cascade
R-HSA-166020Transfer of LPS from LBP carrier to CD14
R-HSA-166058MyD88:MAL(TIRAP) cascade initiated on plasma membrane
R-HSA-166166MyD88-independent TLR4 cascade
R-HSA-168179Toll Like Receptor TLR1:TLR2 Cascade
R-HSA-168188Toll Like Receptor TLR6:TLR2 Cascade
R-HSA-2562578TRIF-mediated programmed cell death
R-HSA-5602498MyD88 deficiency (TLR2/4)
R-HSA-5603041IRAK4 deficiency (TLR2/4)
R-HSA-5686938Regulation of TLR by endogenous ligand
R-HSA-6798695Neutrophil degranulation
R-HSA-936964Activation of IRF3, IRF7 mediated by TBK1, IKKε (IKBKE)
R-HSA-937041IKK complex recruitment mediated by RIP1
R-HSA-937072TRAF6-mediated induction of TAK1 complex within TLR4 complex
R-HSA-975163IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation
R-HSA-9820960Respiratory syncytial virus (RSV) attachment and entry
R-HSA-9824878Regulation of TBK1, IKKε (IKBKE)-mediated activation of IRF3, IRF7
R-HSA-9833110RSV-host interactions
R-HSA-9918485Dengue Virus Attachment and Entry
R-HSA-109581Apoptosis
R-HSA-1236975Antigen processing-Cross presentation
R-HSA-1280218Adaptive Immune System
R-HSA-1643685Disease
R-HSA-168138Toll Like Receptor 9 (TLR9) Cascade
R-HSA-168181Toll Like Receptor 7/8 (TLR7/8) Cascade
R-HSA-168249Innate Immune System
R-HSA-168256Immune System
R-HSA-168898Toll-like Receptor Cascades

MSigDB gene sets: 470 (showing top): REACTOME_TRAF6_MEDIATED_INDUCTION_OF_TAK1_COMPLEX_WITHIN_TLR4_COMPLEX, GSE45365_NK_CELL_VS_CD11B_DC_DN, REACTOME_IKK_COMPLEX_RECRUITMENT_MEDIATED_BY_RIP1, MODULE_328, REACTOME_INNATE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, MCLACHLAN_DENTAL_CARIES_UP, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_POSITIVE_REGULATION_OF_TYPE_I_INTERFERON_PRODUCTION, GOBP_INFLAMMATORY_RESPONSE, GOBP_POSITIVE_REGULATION_OF_INTERLEUKIN_8_PRODUCTION, GOBP_CELLULAR_RESPONSE_TO_LIPID, REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION, GOCC_SECRETORY_GRANULE, KEGG_MAPK_SIGNALING_PATHWAY

GO Biological Process (25): positive regulation of cytokine production (GO:0001819), cell surface pattern recognition receptor signaling pathway (GO:0002752), receptor-mediated endocytosis (GO:0006898), phagocytosis (GO:0006909), apoptotic process (GO:0006915), inflammatory response (GO:0006954), cell surface receptor signaling pathway (GO:0007166), positive regulation of lipopolysaccharide-mediated signaling pathway (GO:0031666), positive regulation of type I interferon production (GO:0032481), positive regulation of type II interferon production (GO:0032729), positive regulation of interleukin-8 production (GO:0032757), positive regulation of tumor necrosis factor production (GO:0032760), toll-like receptor 4 signaling pathway (GO:0034142), positive regulation of toll-like receptor 4 signaling pathway (GO:0034145), innate immune response (GO:0045087), positive regulation of endocytosis (GO:0045807), cellular response to molecule of bacterial origin (GO:0071219), cellular response to lipopolysaccharide (GO:0071222), cellular response to lipoteichoic acid (GO:0071223), cellular response to diacyl bacterial lipopeptide (GO:0071726), cellular response to triacyl bacterial lipopeptide (GO:0071727), response to molecule of bacterial origin (GO:0002237), immune system process (GO:0002376), response to bacterium (GO:0009617), lipopolysaccharide-mediated signaling pathway (GO:0031663)

GO Molecular Function (7): lipopolysaccharide binding (GO:0001530), opsonin receptor activity (GO:0001847), lipopolysaccharide immune receptor activity (GO:0001875), peptidoglycan immune receptor activity (GO:0016019), lipoteichoic acid binding (GO:0070891), molecular carrier activity (GO:0140104), protein binding (GO:0005515)

GO Cellular Component (13): extracellular region (GO:0005576), obsolete extracellular space (GO:0005615), Golgi apparatus (GO:0005794), plasma membrane (GO:0005886), external side of plasma membrane (GO:0009897), endosome membrane (GO:0010008), secretory granule membrane (GO:0030667), membrane raft (GO:0045121), lipopolysaccharide receptor complex (GO:0046696), extracellular exosome (GO:0070062), cell surface (GO:0009986), membrane (GO:0016020), side of membrane (GO:0098552)

Reactome top-level categories

Rollup of top-13 pathways:

CategoryPathways
TRIF (TICAM1)-mediated TLR4 signaling4
Toll Like Receptor 4 (TLR4) Cascade3
Toll-like Receptor Cascades2
Toll Like Receptor 2 (TLR2) Cascade2
Diseases associated with the TLR signaling cascade2
Respiratory Syncytial Virus Infection Pathway2
Antigen processing-Cross presentation1
Caspase activation via extrinsic apoptotic signalling pathway1
Toll Like Receptor TLR1:TLR2 Cascade1
Toll Like Receptor TLR6:TLR2 Cascade1
Innate Immune System1
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation1
Activation of IRF3, IRF7 mediated by TBK1, IKKε (IKBKE)1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cellular anatomical structure4
endocytosis3
positive regulation of cytokine production3
lipopolysaccharide-mediated signaling pathway2
cellular response to molecule of bacterial origin2
cellular response to oxygen-containing compound2
carbohydrate derivative binding2
pattern recognition receptor activity2
binding2
membrane2
cytoplasmic vesicle membrane2
bounding membrane of organelle2
cytokine production1
regulation of cytokine production1
positive regulation of gene expression1
positive regulation of multicellular organismal process1
innate immune response activating cell surface receptor signaling pathway1
pattern recognition receptor signaling pathway1
programmed cell death1
apoptotic signaling pathway1
execution phase of apoptosis1
defense response1
signal transduction1
positive regulation of response to biotic stimulus1
positive regulation of signal transduction1
regulation of lipopolysaccharide-mediated signaling pathway1
positive regulation of response to external stimulus1
regulation of type I interferon production1
type I interferon production1
type II interferon production1
regulation of type II interferon production1
interleukin-8 production1
regulation of interleukin-8 production1
tumor necrosis factor production1
regulation of tumor necrosis factor production1
positive regulation of tumor necrosis factor superfamily cytokine production1
cell surface toll-like receptor signaling pathway1
toll-like receptor 4 signaling pathway1
regulation of toll-like receptor 4 signaling pathway1
positive regulation of pattern recognition receptor signaling pathway1

Protein interactions and networks

STRING

1427 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
CD14LBPP18428945
CD14TLR4O00206939
CD14LY96Q9Y6Y9743
CD14TLR2O60603706
CD14SP3Q02447514
CD14PLCG2P16885497
CD14DOCK1Q14185494
CD14CSF2P04141493
CD14TLR9Q9NR96475
CD14TLR3O15455472
CD14TLR7Q9NYK1464
CD14TTRP02766459
CD14CD55P08174454
CD14MMP9P14780444
CD14TXNL1O43396439

IntAct

29 interactions, top by confidence:

ABTypeScore
FSTL1CD14psi-mi:“MI:0915”(physical association)0.660
CD14FSTL1psi-mi:“MI:0915”(physical association)0.660
CD14FSTL1psi-mi:“MI:0407”(direct interaction)0.660
CD14psi-mi:“MI:0407”(direct interaction)0.440
TLR2CD14psi-mi:“MI:0407”(direct interaction)0.440
IRAK3CD14psi-mi:“MI:0915”(physical association)0.440
IRAK3CD14psi-mi:“MI:0403”(colocalization)0.440
DERP2CD14psi-mi:“MI:0915”(physical association)0.400
DIP2ACD14psi-mi:“MI:0915”(physical association)0.400
NLRP12CD14psi-mi:“MI:0915”(physical association)0.370
CD14E7psi-mi:“MI:0915”(physical association)0.370
GJB2CD14psi-mi:“MI:0915”(physical association)0.370
POLR2JCD14psi-mi:“MI:0915”(physical association)0.370
CD14PPP3R2psi-mi:“MI:0915”(physical association)0.370
TNFRSF1BCD14psi-mi:“MI:0915”(physical association)0.370
ARFGAP3CD14psi-mi:“MI:0915”(physical association)0.370
CD14PHF20L1psi-mi:“MI:0914”(association)0.350
CD177MYO1Gpsi-mi:“MI:0914”(association)0.350
CD14MAN2B1psi-mi:“MI:0914”(association)0.350
RNF133CD14psi-mi:“MI:0914”(association)0.350
FNDC5A2ML1psi-mi:“MI:0914”(association)0.350
RNF133NME2P1psi-mi:“MI:0914”(association)0.350
CD14SERPINE1psi-mi:“MI:0914”(association)0.350
CD33CD14psi-mi:“MI:2364”(proximity)0.270

BioGRID (50): ANXA7 (Affinity Capture-MS), BUB1B (Affinity Capture-MS), AP3S1 (Affinity Capture-MS), PPP1R12B (Affinity Capture-MS), SVIL (Affinity Capture-MS), TAF1 (Affinity Capture-MS), TAF9 (Affinity Capture-MS), ICAM5 (Affinity Capture-MS), OASL (Affinity Capture-MS), EXO1 (Affinity Capture-MS), HPS5 (Affinity Capture-MS), PHF20L1 (Affinity Capture-MS), PHF21A (Affinity Capture-MS), BCAS3 (Affinity Capture-MS), C2orf44 (Affinity Capture-MS)

ESM2 similar proteins: A2ASA8, A5PJJ5, A6NE52, A6NHZ5, B6CZ46, E9QAM5, G7PWZ3, P08571, P10810, P33076, P52824, P79621, P86243, Q15048, Q15345, Q1L8H0, Q28680, Q32PG9, Q3U1Y4, Q3UJB3, Q3UWY1, Q3V1N1, Q3V3V9, Q3ZBI5, Q569B5, Q5BK65, Q5DU56, Q5M936, Q63035, Q63691, Q640Z9, Q66H52, Q68EF8, Q6F5E8, Q6GPH6, Q6P5E8, Q6QNU9, Q6R5P0, Q7RTR2, Q80VA5

Diamond homologs: P08571, P10810, Q28680, Q63691, Q6T752, Q95122, Q9QUN7, Q9R1F8, B2LT61, B2LT62, B2LT64, B2LT65, B5T267, Q0GC71, Q2PZH4, Q2V897, Q95LA9, Q9DD78, Q95M53, Q9DGB6, B3Y613, B3Y614, B3Y615, B3Y618, O00206, O60603, P0DUE1, P23515, P34595, P58727, Q0ZUL9, Q13478, Q15399, Q5I2M3, Q61098, Q689D1, Q6GV17, Q6R5N8, Q704V6, Q8BXA7

SIGNOR signaling

1 interactions.

AEffectBMechanism
SPI1“up-regulates quantity by expression”CD14“transcriptional regulation”

Disease & clinical

Clinical variants and AI predictions

ClinVar

54 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance48
Likely benign4
Benign1

Top pathogenic / likely-pathogenic (0)

SpliceAI

225 predictions. Top by Δscore:

VariantEffectΔscore
5:140632325:T:Cacceptor_gain1.0000
5:140633066:CACCA:Cdonor_loss0.9900
5:140633067:A:ACdonor_gain0.9900
5:140633068:C:CAdonor_loss0.9900
5:140633068:C:CCdonor_gain0.9900
5:140632976:CGCTC:Cacceptor_gain0.9800
5:140633061:ACACT:Adonor_loss0.9800
5:140633062:CACTC:Cdonor_loss0.9800
5:140633063:ACTCA:Adonor_loss0.9800
5:140632977:GCTCC:Gacceptor_loss0.9700
5:140632978:CTC:Cacceptor_gain0.9700
5:140632979:TCC:Tacceptor_loss0.9700
5:140632980:CCT:Cacceptor_loss0.9700
5:140632981:C:Aacceptor_loss0.9700
5:140632982:T:Gacceptor_loss0.9700
5:140632979:TC:Tacceptor_gain0.9600
5:140632980:CC:Cacceptor_gain0.9600
5:140632981:C:CCacceptor_gain0.9600
5:140633067:AC:Adonor_gain0.9600
5:140633068:CC:Cdonor_gain0.9600
5:140633068:CCA:Cdonor_gain0.9600
5:140633574:T:TAdonor_gain0.9500
5:140632325:T:TCacceptor_gain0.9200
5:140632977:GCTC:Gacceptor_gain0.9200
5:140632978:CTCC:Cacceptor_gain0.9200
5:140632979:TCCT:Tacceptor_gain0.9200
5:140633068:CCAT:Cdonor_gain0.9200
5:140633068:CCATG:Cdonor_gain0.9200
5:140633548:C:CTdonor_gain0.9200
5:140633549:T:TTdonor_gain0.9200

AlphaMissense

2374 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
5:140632162:C:AW274C0.979
5:140632162:C:GW274C0.979
5:140632832:C:GC51S0.979
5:140632833:A:TC51S0.979
5:140632849:C:AW45C0.979
5:140632849:C:GW45C0.979
5:140632871:A:CF38C0.979
5:140632833:A:GC51R0.976
5:140632877:C:GC36S0.970
5:140632878:A:TC36S0.970
5:140632064:T:AN307I0.965
5:140631997:A:CN329K0.964
5:140631997:A:TN329K0.964
5:140632079:A:TL302H0.964
5:140632831:A:CC51W0.963
5:140632870:G:CF38L0.963
5:140632870:G:TF38L0.963
5:140632872:A:GF38L0.963
5:140632063:G:CN307K0.962
5:140632063:G:TN307K0.962
5:140632207:G:CN259K0.962
5:140632207:G:TN259K0.962
5:140632622:A:GL121P0.962
5:140632877:C:TC36Y0.960
5:140632322:A:CF221C0.956
5:140632883:C:GC34S0.956
5:140632884:A:TC34S0.956
5:140632073:A:GL304P0.952
5:140632832:C:TC51Y0.952
5:140632910:C:GC25S0.951

dbSNP variants (sampled 300 via entrez): RS1002825640 (5:140631600 TGAG>T), RS1003752066 (5:140634734 C>G), RS1003922204 (5:140634314 G>A), RS1006243753 (5:140631697 T>C), RS1006335701 (5:140631323 G>A), RS1007538218 (5:140631528 C>A,T), RS1008156682 (5:140635496 A>G), RS1009953211 (5:140634766 C>T), RS1010546149 (5:140633140 C>G), RS1010660681 (5:140633526 C>T), RS1011045674 (5:140632732 G>A), RS1012601497 (5:140633145 G>A,C), RS1013603088 (5:140634742 G>A), RS1013693482 (5:140634377 A>G), RS1015211008 (5:140633947 C>A)

Disease associations

OMIM: gene MIM:158120 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

4 associations (top):

StudyTraitp-value
GCST006585_109Blood protein levels4.000000e-12
GCST006803_54Schizophrenia8.000000e-07
GCST010002_39Refractive error2.000000e-14
GCST010146_22Serum immune biomarker levels7.000000e-09

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0004872inflammatory biomarker measurement

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (2): CHEMBL2384897 (SINGLE PROTEIN), CHEMBL3038513 (PROTEIN COMPLEX)

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB clinical annotations

1 annotations.

VariantTypeLevelDrugsPhenotypes
rs2569190Efficacy3Tumor necrosis factor alpha (TNF-alpha) inhibitorsUlcerative Colitis

PharmGKB variants

1 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs2569190CD14, TMCO632.251Tumor necrosis factor alpha (TNF-alpha) inhibitors

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: other protein — CD molecules

ChEMBL bioactivities

4 potent at pChembl≥5 of 6 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
6.70IC50200nMCHEMBL4072822
6.16IC50700nMCHEMBL4081306
5.24IC505700nMCHEMBL4105554
5.00IC501e+04nMCHEMBL4093531

PubChem BioAssay actives

4 with measured affinity, of 27 total; 4 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
2-[4-[[5,11,17,23-tetratert-butyl-26,27,28-tris[4-(diaminomethylideneamino)butoxy]-25-pentacyclo[19.3.1.13,7.19,13.115,19]octacosa-1(24),3,5,7(28),9,11,13(27),15(26),16,18,21(25),22-dodecaenyl]oxy]butyl]guanidine;tetrahydrochloride1447912: Binding affinity to CD14/MD2 (unknown origin) expressed in HEK-Blue cells co-expressing TLR4 assessed as inhibition of LPS-induced TLR4 signaling preincubated for 30 mins followed by LPS stimulation measured after overnight incubation by secreted embryonic alkaline phosphatase reporter gene assayic500.2000uM
2-[11,17,23-tris(diaminomethylideneamino)-25,26,27-tripropoxy-5-pentacyclo[19.3.1.13,7.19,13.115,19]octacosa-1(25),3(28),4,6,9(27),10,12,15,17,19(26),21,23-dodecaenyl]guanidine;tetrahydrochloride1447912: Binding affinity to CD14/MD2 (unknown origin) expressed in HEK-Blue cells co-expressing TLR4 assessed as inhibition of LPS-induced TLR4 signaling preincubated for 30 mins followed by LPS stimulation measured after overnight incubation by secreted embryonic alkaline phosphatase reporter gene assayic500.7000uM
2-[11,17,23-tris(diaminomethylideneamino)-25,26,27-trihexoxy-5-pentacyclo[19.3.1.13,7.19,13.115,19]octacosa-1(25),3(28),4,6,9(27),10,12,15,17,19(26),21,23-dodecaenyl]guanidine;tetrahydrochloride1447912: Binding affinity to CD14/MD2 (unknown origin) expressed in HEK-Blue cells co-expressing TLR4 assessed as inhibition of LPS-induced TLR4 signaling preincubated for 30 mins followed by LPS stimulation measured after overnight incubation by secreted embryonic alkaline phosphatase reporter gene assayic505.7000uM
2-[3-[[5,11,17,23-tetratert-butyl-26,27,28-tris[3-(diaminomethylideneamino)propoxy]-25-pentacyclo[19.3.1.13,7.19,13.115,19]octacosa-1(24),3,5,7(28),9,11,13(27),15(26),16,18,21(25),22-dodecaenyl]oxy]propyl]guanidine;tetrahydrochloride1447912: Binding affinity to CD14/MD2 (unknown origin) expressed in HEK-Blue cells co-expressing TLR4 assessed as inhibition of LPS-induced TLR4 signaling preincubated for 30 mins followed by LPS stimulation measured after overnight incubation by secreted embryonic alkaline phosphatase reporter gene assayic5010.0000uM

CTD chemical–gene interactions

162 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Calcitriolincreases expression, increases reaction, affects cotreatment, affects binding, decreases reaction18
Lipopolysaccharidesdecreases reaction, increases expression, affects reaction, increases reaction, increases secretion (+4 more)8
Tetradecanoylphorbol Acetateincreases expression, increases reaction7
Tretinoinincreases expression, increases reaction, affects cotreatment6
sodium arseniteaffects methylation, decreases expression, increases expression5
Benzo(a)pyreneaffects cotreatment, increases expression, increases reaction, decreases expression, decreases methylation5
perfluorooctane sulfonic acidaffects expression, decreases expression, increases expression3
2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-oneincreases reaction, decreases reaction, increases expression3
Resveratrolaffects cotreatment, increases expression3
Decitabineaffects cotreatment, increases expression, increases reaction3
Arsenic Trioxidedecreases reaction, increases expression, increases reaction, decreases expression3
Troglitazonedecreases expression, increases expression3
Air Pollutantsdecreases expression, increases abundance, increases expression3
Nickeldecreases expression, increases expression3
Particulate Matterdecreases expression, increases abundance, decreases methylation3
paricalcitolaffects cotreatment, increases expression2
SB 203580decreases reaction, increases expression, increases reaction2
pyrazolanthronedecreases reaction, increases expression2
lipopolysaccharide, Escherichia coli O111 B4decreases reaction, increases expression, increases reaction, affects cotreatment, increases response to substance2
lithocholic acid acetateincreases expression2
Zoledronic Acidincreases expression2
Arsenicincreases expression, decreases expression, increases abundance2
Cadmiumdecreases reaction, affects cotreatment, decreases expression, increases expression2
Cholecalciferolaffects cotreatment, increases expression, decreases reaction2
Lithocholic Acidincreases expression, increases reaction2
Testosteroneaffects cotreatment, increases expression2
Tobacco Smoke Pollutionaffects expression2
Cyclosporineincreases expression, decreases expression2
aristolochic acid Iincreases expression1
SHP099increases expression, increases reaction1

ChEMBL screening assays

9 unique, capped per target: 9 binding

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL2389992BindingActivation of human TLR4/MD-2/CD14 transfected in HEK293 cells at 10 uM after 20 to 24 hrs by SEAP assayIdentification of substituted pyrimido[5,4-b]indoles as selective Toll-like receptor 4 ligands. — J Med Chem

Cellosaurus cell lines

25 cell lines: 14 transformed cell line, 11 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_A8CRHEK-Blue-Lucia hTLR2 (NF/IL8)Transformed cell lineFemale
CVCL_B8CTAbcam HCT 116 CD14 KOCancer cell lineMale
CVCL_B8TJAbcam MCF-7 CD14 KOCancer cell lineFemale
CVCL_B9F1Abcam A-549 CD14 KOCancer cell lineMale
CVCL_D7ADLeeporter HeLa TLR4/IL-8 luciferaseCancer cell lineFemale
CVCL_D7LZUbigene A-549 CD14 KOCancer cell lineMale
CVCL_D9BEUbigene HEK293 CD14 KOTransformed cell lineFemale
CVCL_E1JVHyCyte GES-1 KO-hCD14Transformed cell lineSex unspecified
CVCL_E2QRTHP-1 TLR4-CD14 NFkappaB-eGFPCancer cell lineMale
CVCL_E6V0Genomeditech HEK-293 H_TLR4 ReporterTransformed cell lineFemale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.