CD2AP-DT

Summary

CD2AP-DT (CD2AP divergent transcript, HGNC:55263) is a long non-coding RNA gene on chromosome 6p12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55263
Approved symbol	CD2AP-DT
Name	CD2AP divergent transcript
Location	6p12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000270761
Ensembl biotype	lncRNA
Entrez	118732299
RNAcentral	URS00026A24C3 — lncRNA, 830 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000604014, ENST00000722837

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000604014 — 1 exons

Exon	Start	End
ENSE00004043876	47476441	47478160

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 91.63.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	91.63	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.47	silver quality
mucosa of transverse colon	UBERON:0004991	84.03	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	82.49	gold quality
adult mammalian kidney	UBERON:0000082	80.34	gold quality
cortex of kidney	UBERON:0001225	79.33	gold quality
kidney	UBERON:0002113	79.22	gold quality
metanephros cortex	UBERON:0010533	78.39	gold quality
right uterine tube	UBERON:0001302	77.34	gold quality
body of pancreas	UBERON:0001150	76.69	gold quality
right lobe of liver	UBERON:0001114	75.88	gold quality
pancreas	UBERON:0001264	75.13	gold quality
adenohypophysis	UBERON:0002196	75.01	gold quality
pituitary gland	UBERON:0000007	74.27	gold quality
transverse colon	UBERON:0001157	73.00	gold quality
liver	UBERON:0002107	72.65	gold quality
islet of Langerhans	UBERON:0000006	72.12	gold quality
right lung	UBERON:0002167	72.11	gold quality
rectum	UBERON:0001052	71.52	gold quality
left adrenal gland cortex	UBERON:0035825	71.22	gold quality
thyroid gland	UBERON:0002046	70.49	gold quality
left lobe of thyroid gland	UBERON:0001120	70.25	gold quality
prostate gland	UBERON:0002367	70.02	gold quality
endocervix	UBERON:0000458	69.95	gold quality
bone marrow cell	CL:0002092	69.84	gold quality
duodenum	UBERON:0002114	69.80	gold quality
colonic epithelium	UBERON:0000397	69.49	silver quality
tonsil	UBERON:0002372	69.41	gold quality
left adrenal gland	UBERON:0001234	69.32	gold quality
skeletal muscle tissue	UBERON:0001134	69.03	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.