CD36
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Also known as SCARB3GPIVFATGP4GP3BGPIIIB
Summary
CD36 (CD36 molecule (CD36 blood group), HGNC:1663) is a protein-coding gene on chromosome 7q21.11, encoding Platelet glycoprotein 4 (P16671). Multifunctional glycoprotein that acts as a receptor for a broad range of ligands.
The protein encoded by this gene is the fourth major glycoprotein of the platelet surface and serves as a receptor for thrombospondin in platelets and various cell lines. Since thrombospondins are widely distributed proteins involved in a variety of adhesive processes, this protein may have important functions as a cell adhesion molecule. It binds to collagen, thrombospondin, anionic phospholipids and oxidized LDL. It directly mediates cytoadherence of Plasmodium falciparum parasitized erythrocytes and it binds long chain fatty acids and may function in the transport and/or as a regulator of fatty acid transport. Mutations in this gene cause platelet glycoprotein deficiency. Multiple alternatively spliced transcript variants have been found for this gene.
Source: NCBI Gene 948 — RefSeq curated summary.
At a glance
- Gene–disease (curated): platelet-type bleeding disorder 10 (Strong, GenCC)
- GWAS associations: 45
- Clinical variants (ClinVar): 341 total — 29 pathogenic, 32 likely-pathogenic
- Phenotypes (HPO): 5
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity unscored
- MANE Select transcript:
NM_001001548
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:1663 |
| Approved symbol | CD36 |
| Name | CD36 molecule (CD36 blood group) |
| Location | 7q21.11 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | SCARB3, GPIV, FAT, GP4, GP3B, GPIIIB |
| Ensembl gene | ENSG00000135218 |
| Ensembl biotype | protein_coding |
| OMIM | 173510 |
| Entrez | 948 |
Gene structure
Transcript identifiers
Ensembl transcripts: 120 — 113 protein_coding, 4 protein_coding_CDS_not_defined, 2 retained_intron, 1 nonsense_mediated_decay
ENST00000309881, ENST00000394788, ENST00000413265, ENST00000419819, ENST00000426978, ENST00000428497, ENST00000432207, ENST00000433696, ENST00000435819, ENST00000436384, ENST00000438020, ENST00000441034, ENST00000441109, ENST00000447544, ENST00000464213, ENST00000478292, ENST00000480599, ENST00000482059, ENST00000488048, ENST00000526804, ENST00000534394, ENST00000538969, ENST00000544133, ENST00000648416, ENST00000855923, ENST00000855924, ENST00000855925, ENST00000855926, ENST00000855927, ENST00000855928, ENST00000855929, ENST00000855930, ENST00000855931, ENST00000855932, ENST00000855933, ENST00000855934, ENST00000855935, ENST00000855936, ENST00000855937, ENST00000855938, ENST00000855939, ENST00000855940, ENST00000855941, ENST00000855942, ENST00000855943, ENST00000855944, ENST00000855945, ENST00000855946, ENST00000855947, ENST00000855948, ENST00000855949, ENST00000855950, ENST00000855951, ENST00000855952, ENST00000855953, ENST00000855954, ENST00000855955, ENST00000855956, ENST00000855957, ENST00000855958, ENST00000855959, ENST00000855960, ENST00000855961, ENST00000855962, ENST00000855963, ENST00000855964, ENST00000855965, ENST00000855966, ENST00000956914, ENST00000956915, ENST00000956916, ENST00000956917, ENST00000956918, ENST00000956919, ENST00000956920, ENST00000956921, ENST00000956922, ENST00000956923, ENST00000956924, ENST00000956925, ENST00000956926, ENST00000956927, ENST00000956928, ENST00000956929, ENST00000956930, ENST00000956931, ENST00000956932, ENST00000956933, ENST00000956934, ENST00000956935, ENST00000956936, ENST00000956937, ENST00000956938, ENST00000956939, ENST00000956940, ENST00000956941, ENST00000956942, ENST00000956943, ENST00000956944, ENST00000956945, ENST00000956946, ENST00000956947, ENST00000956948, ENST00000956949, ENST00000956950, ENST00000956951, ENST00000956952, ENST00000956953, ENST00000956954, ENST00000956955, ENST00000956956, ENST00000956957, ENST00000956958, ENST00000956959, ENST00000956960, ENST00000956961, ENST00000956962, ENST00000956963, ENST00000956964, ENST00000956965
RefSeq mRNA: 15 — MANE Select: NM_001001548
NM_000072, NM_001001547, NM_001001548, NM_001127443, NM_001127444, NM_001289908, NM_001289909, NM_001289911, NM_001371074, NM_001371075, NM_001371077, NM_001371078, NM_001371079, NM_001371080, NM_001371081
CCDS: CCDS34673, CCDS78249, CCDS78250, CCDS78251
Canonical transcript exons
ENST00000447544 — 15 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000698626 | 80666443 | 80666489 |
| ENSE00000877067 | 80669953 | 80670022 |
| ENSE00000877068 | 80670977 | 80671164 |
| ENSE00001420198 | 80646088 | 80646181 |
| ENSE00001519578 | 80673983 | 80674147 |
| ENSE00001934020 | 80676384 | 80679274 |
| ENSE00003463166 | 80672770 | 80672843 |
| ENSE00003549922 | 80671922 | 80672040 |
| ENSE00003610329 | 80673355 | 80673409 |
| ENSE00003659355 | 80664406 | 80664497 |
| ENSE00003685903 | 80646652 | 80646860 |
| ENSE00003785604 | 80661063 | 80661210 |
| ENSE00003785903 | 80656540 | 80656700 |
| ENSE00003789131 | 80662990 | 80663169 |
| ENSE00003844768 | 80638642 | 80638746 |
Expression profiles
Bgee: expression breadth ubiquitous, 252 present calls, max score 99.61.
FANTOM5 (CAGE): breadth broad, TPM avg 105.2832 / max 8849.2525, expressed in 913 samples.
FANTOM5 promoters (44 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 79306 | 80.3204 | 631 |
| 79307 | 11.7376 | 464 |
| 79312 | 2.6545 | 53 |
| 79295 | 2.1448 | 258 |
| 79305 | 0.6555 | 130 |
| 79293 | 0.6409 | 83 |
| 79291 | 0.6084 | 80 |
| 79289 | 0.5808 | 73 |
| 79303 | 0.5022 | 59 |
| 79290 | 0.4671 | 71 |
Top tissues by expression
291 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| adipose tissue of abdominal region | UBERON:0007808 | 99.61 | gold quality |
| omental fat pad | UBERON:0010414 | 99.60 | gold quality |
| monocyte | CL:0000576 | 99.55 | gold quality |
| adipose tissue | UBERON:0001013 | 99.53 | gold quality |
| jejunal mucosa | UBERON:0000399 | 99.47 | gold quality |
| peritoneum | UBERON:0002358 | 99.44 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.42 | gold quality |
| mononuclear cell | CL:0000842 | 99.33 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 99.28 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 99.25 | gold quality |
| leukocyte | CL:0000738 | 99.24 | gold quality |
| cardiac ventricle | UBERON:0002082 | 99.20 | gold quality |
| heart left ventricle | UBERON:0002084 | 99.20 | gold quality |
| apex of heart | UBERON:0002098 | 99.09 | gold quality |
| skin of hip | UBERON:0001554 | 99.02 | gold quality |
| connective tissue | UBERON:0002384 | 98.89 | gold quality |
| right atrium auricular region | UBERON:0006631 | 98.79 | gold quality |
| myocardium | UBERON:0002349 | 98.77 | gold quality |
| cardiac atrium | UBERON:0002081 | 98.72 | gold quality |
| trabecular bone tissue | UBERON:0002483 | 98.42 | gold quality |
| vena cava | UBERON:0004087 | 98.42 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 98.41 | gold quality |
| heart | UBERON:0000948 | 98.30 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 98.30 | gold quality |
| biceps brachii | UBERON:0001507 | 98.23 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 98.23 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 98.16 | gold quality |
| colonic epithelium | UBERON:0000397 | 98.08 | gold quality |
| buccal mucosa cell | CL:0002336 | 98.07 | gold quality |
| duodenum | UBERON:0002114 | 98.07 | gold quality |
Single-cell (SCXA)
Detected in 23 experiment(s), a significant marker in 20.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-81383 | yes | 5237.96 |
| E-ENAD-20 | yes | 2859.10 |
| E-HCAD-24 | yes | 2021.64 |
| E-CURD-11 | yes | 1889.19 |
| E-MTAB-6701 | yes | 1697.95 |
| E-MTAB-10553 | yes | 1548.28 |
| E-GEOD-149689 | yes | 516.49 |
| E-GEOD-83139 | yes | 178.53 |
| E-HCAD-4 | yes | 140.82 |
| E-CURD-122 | yes | 72.21 |
| E-CURD-112 | yes | 65.82 |
| E-HCAD-10 | yes | 53.10 |
| E-MTAB-10042 | yes | 28.86 |
| E-MTAB-6678 | yes | 26.03 |
| E-HCAD-9 | yes | 20.59 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
3 targets.
| Target | Regulation |
|---|---|
| CCL5 | Activation |
| CXCL1 | Activation |
| CXCL2 | Activation |
Upstream regulators (CollecTRI, top): AEBP1, AHR, CEBPA, CEBPB, CEBPG, GLI2, HIF1A, IL13, IL4, KLF2, NFE2L2, NR1H2, NR1H3, NR1H4, NR1I2, NR2C2, POU2F2, PPARA, PPARD, PPARG, RUNX3, SREBF1, STAT1, STAT5A, TCF3, TCF4, TFAP2A, TFAP2B, TNF
miRNA regulators (miRDB)
42 targeting CD36, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-6508-5P | 99.92 | 70.67 | 2465 |
| HSA-MIR-12133 | 99.92 | 71.82 | 2006 |
| HSA-MIR-1271-5P | 99.91 | 71.99 | 1972 |
| HSA-MIR-106A-5P | 99.90 | 73.94 | 2683 |
| HSA-MIR-4753-3P | 99.90 | 71.03 | 3786 |
| HSA-MIR-17-5P | 99.89 | 73.83 | 2665 |
| HSA-MIR-106B-5P | 99.88 | 74.72 | 2795 |
| HSA-MIR-20A-5P | 99.88 | 74.76 | 2769 |
| HSA-MIR-20B-5P | 99.88 | 74.01 | 2621 |
| HSA-MIR-519D-3P | 99.88 | 73.97 | 2607 |
| HSA-MIR-526B-3P | 99.88 | 74.06 | 2587 |
| HSA-MIR-93-5P | 99.88 | 73.98 | 2606 |
| HSA-MIR-8067 | 99.86 | 69.59 | 2260 |
| HSA-MIR-629-3P | 99.85 | 67.99 | 1875 |
| HSA-MIR-520F-3P | 99.82 | 71.32 | 1216 |
| HSA-MIR-4713-5P | 99.78 | 67.80 | 1794 |
| HSA-MIR-2116-3P | 99.74 | 64.32 | 889 |
| HSA-MIR-379-3P | 99.69 | 69.60 | 1524 |
| HSA-MIR-411-3P | 99.69 | 69.63 | 1524 |
| HSA-MIR-2113 | 99.58 | 71.22 | 1521 |
| HSA-MIR-3609 | 99.52 | 69.89 | 2587 |
| HSA-MIR-548AH-5P | 99.52 | 69.73 | 2626 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity Not yet evaluated (unscored). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- novel variants in individuals from malaria-endemic Ghana (PMID:11668637)
- The metabolic role of CD36 was tested by glucose loading in type I or II CD36 deficiency pts. Changes in triglyceride and glucose metabolism were seen in CD36 deficiency due to impaired fast FA clearance by muscle and increased liver FA uptake. (PMID:11686358)
- A redox-dependent conformational fraction of CD36, localized in the CD36 C-terminal cysteine-rich region, mediates cytoadherence of Plasmodium falciparum-infected erythrocytes to CD36-expressing cells and is inducible by low toxicity reducing agents. (PMID:11714819)
- CD36 Pro90Ser mutation is not necessarily related to the insulin resistance syndrome, but is associated with high free fatty acid concentrations in Japanese (PMID:11718687)
- CD36 deficiency induced by antiretroviral therapy. (PMID:11834946)
- promoter structure and trans activation by pparalpha and ppargamma ligands (PMID:11867619)
- Advanced glycation endproducts generated in situ are recognized by CD36, which might contribute to the pathogenesis of diabetic macrovascular complications. (PMID:11872368)
- identification of terminal six amino acids of carboxy cytoplasmic tail as a functional domain implicated in binding and capture of oxidized low-density lipoprotein (PMID:12023894)
- Genomic heterogeneity of type II CD36 deficiency (PMID:12031598)
- Results offer structural insights into the molecular patterns recognized by the scavenger receptor CD36 and provide a platform for the development of potential therapeutic inhibitory agents. (PMID:12105195)
- Heterozygotes, CD36+/-, have a significant reduction of long-chain fatty acids uptake in the heart independent of heart disease, suggesting genotype dependency and that CD36 might be a fundamental determinant of myocardial LCFA uptake. (PMID:12224819)
- Data show that expression of CD36 on platelet membranes was increased in myeloproliferative, but was not significantly different from normal controls in non-insulin-dependent diabetes mellitus. (PMID:12479587)
- mediates nonopsonic phagocytosis of erythrocytes infected with stage I and IIA gametocytes of Plasmodium falciparum in monocytes and macrophages (PMID:12496189)
- Adhesion of dendritic cells derived from CD34+ progenitors to resting human dermal microvascular endothelial cells is down-regulated upon maturation and partially depends on CD11a-CD18, CD11b-CD18 and CD36. (PMID:12516552)
- polySia of milk CD36 is significant for neonatal development in terms of protection and nutrition (PMID:12576469)
- Macrophage recognition and phagocytosis of apoptotic fibroblasts is critically dependent on this protein. (PMID:12598312)
- mediates endocytic uptake of advanced glycation end products (PMID:12606036)
- Expression of the monocyte-macrophage LDL scavenger receptor CD36 is increased in people with diabetes mellitus, type 2. (PMID:12618277)
- Expression in melanoma cells is regulated by NSAIDs. (PMID:12664607)
- TSP-1-induced inhibition of megakaryocytopoiesis is probably mediated in part by the binding of TSP-1 to CD36 expressed on the megakaryocytic progenitors (PMID:12679131)
- data suggest that platelet Cd36 has a key role in VLDL-induced collagen-mediated platelet aggregation, possibly contributing to atherothrombosis associated with increased VLDL levels (PMID:12716760)
- Lipoprotein abnormalities in human genetic CD36 deficiency is associated with insulin resistance and abnormal fatty acid metabolism. (PMID:12716848)
- Expression of CD36 mRNA was up-regulated by mildly- and moderately-oxLDL, but not highly-oxLDL. (PMID:12801610)
- CD36 is localized in lipid rafts but not in caveolae, and binding of OxLDL to CD36 leads to endocytosis through a lipid raft pathway (PMID:12947091)
- CD36 and SR-BI are receptors for hypochlorite-modified low density lipoprotein (PMID:12968020)
- Higher levels of fatty acid translocase/CD36 in human female liver may aid sexually dimorphic development of diseases resulting from or characterized by disturbances in lipid metabolism, such as arteriosclerosis, hyperlipidemia, and insulin resistance. (PMID:14684613)
- there is a CD36-dependent signaling cascade initiated by fibrillar amyloid species that may promote atherogenesis (PMID:14699114)
- CD36 ribozyme specifically suppresses CD36 gene expression and growth in osteosarcoma csell lines. (PMID:14719070)
- CD36 colocalizes with caveolin-3, suggesting that caveolae may regulate cellular fatty acid uptake by CD36. CD36 expression is higher in type 1 compared with type 2 fibers, whereas caveolin-3 expression is significantly higher in type 2 than in type 1 (PMID:14729862)
- CD36 was reactive with microvascular endothelium and adipocytes.Its expression on these high endothelial cells suggest that it participate in trafficking of leukocytes,especially lymphocytes to the omentum. (PMID:15048167)
- CD36 is regulated by estrogen receptors in breast cancer cells (PMID:15050739)
- CD36 has a role in beta-amyloid deposition but not with Alzheimer’s disease (PMID:15059642)
- Promoter polymorphism in CD36 is associated with atherogenesis is french population. (PMID:15064117)
- Redistribution of FAT/CD36 to the sarcolemma may contribute to the etiology of insulin resistance in human muscle. (PMID:15132977)
- A rare CD36 nonsense mutation found in a Caucasian pedigree with autosomal dominant type II diabetes. (PMID:15221799)
- Single Nucleotide Polymorphisms in CD36 Antigens is associated with cardiovascular diseases (PMID:15282206)
- In patients with type I CD36 deficiency, immunization with CD36 antigen by transfusion, can produce anti-CD36 antibody, and potentially lead to platelet transfusion refractoriness or post-tansfusion purpur (PMID:15339698)
- host membrane proteins such as AE1 contribute to the adhesion of malaria-infected erythrocytes to CD36 (PMID:15478802)
- Single nucleotide polymorphism promoter mutation in the CD36 gene represents a putative genetic marker for insulin-resistance in the French population. (PMID:15671915)
- CD36 activity appears important for uptake of fatty acids into beta-cells as well as for mediating their modulatory effects on insulin secretion. (PMID:15677505)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cd36 | ENSDARG00000032639 |
| mus_musculus | Cd36 | ENSMUSG00000002944 |
| rattus_norvegicus | Cd36-ps1 | ENSRNOG00000005906 |
| rattus_norvegicus | ENSRNOG00000073733 | |
| rattus_norvegicus | ENSRNOG00000078327 | |
| rattus_norvegicus | ENSRNOG00000090226 | |
| caenorhabditis_elegans | WBGENE00013039 | |
| caenorhabditis_elegans | WBGENE00013578 | |
| caenorhabditis_elegans | WBGENE00015389 |
Paralogs (2): SCARB1 (ENSG00000073060), SCARB2 (ENSG00000138760)
Protein
Protein identifiers
Platelet glycoprotein 4 — P16671 (reviewed: P16671)
Alternative names: Fatty acid translocase, Glycoprotein IIIb, Leukocyte differentiation antigen CD36, PAS IV, PAS-4, Platelet collagen receptor, Platelet glycoprotein IV, Thrombospondin receptor
All UniProt accessions (11): A4D1B1, E7ERZ9, E7EU05, E7EVU1, E7EWI4, E7EX47, P16671, E9PC45, E9PJX8, E9PLT1, H0YEE7
UniProt curated annotations — full annotation on UniProt →
Function. Multifunctional glycoprotein that acts as a receptor for a broad range of ligands. Ligands can be of proteinaceous nature like thrombospondin, fibronectin, collagen or amyloid-beta as well as of lipidic nature such as oxidized low-density lipoprotein (oxLDL), anionic phospholipids, long-chain fatty acids and bacterial diacylated lipopeptides. They are generally multivalent and can therefore engage multiple receptors simultaneously, the resulting formation of CD36 clusters initiates signal transduction and internalization of receptor-ligand complexes. The dependency on coreceptor signaling is strongly ligand specific. Cellular responses to these ligands are involved in angiogenesis, inflammatory response, fatty acid metabolism, taste and dietary fat processing in the intestine. Binds long-chain fatty acids and facilitates their transport into cells, thus participating in muscle lipid utilization, adipose energy storage, and gut fat absorption. Mechanistically, palmitoylated CD36 captures fatty acids on the cell surface, the binding of fatty acids activates downstream kinase LYN, which phosphorylates the palmitoyltransferase ZDHHC5 and inactivates it, resulting in the subsequent depalmitoylation of CD36, a step needed to initiate the endocytic process and delivery of fatty acids into the cell. In the small intestine, plays a role in proximal absorption of dietary fatty acid and cholesterol for optimal chylomicron formation, possibly through the activation of MAPK1/3 (ERK1/2) signaling pathway. Involved in oral fat perception and preferences. Detection into the tongue of long-chain fatty acids leads to a rapid and sustained rise in flux and protein content of pancreatobiliary secretions. In taste receptor cells, mediates the induction of an increase in intracellular calcium levels by long-chain fatty acids, leading to the activation of the gustatory neurons in the nucleus of the solitary tract. Important factor in both ventromedial hypothalamus neuronal sensing of long-chain fatty acid and the regulation of energy and glucose homeostasis. Receptor for thrombospondins, THBS1 and THBS2, mediating their antiangiogenic effects. Involved in inducing apoptosis in podocytes in response to elevated free fatty acids, acting together with THBS1. As a coreceptor for TLR4:TLR6 heterodimer, promotes inflammation in monocytes/macrophages. Upon ligand binding, such as oxLDL or amyloid-beta 42, interacts with the heterodimer TLR4:TLR6, the complex is internalized and triggers inflammatory response, leading to NF-kappa-B-dependent production of CXCL1, CXCL2 and CCL9 cytokines, via MYD88 signaling pathway, and CCL5 cytokine, via TICAM1 signaling pathway, as well as IL1B secretion, through the priming and activation of the NLRP3 inflammasome. Selective and nonredundant sensor of microbial diacylated lipopeptide that signal via TLR2:TLR6 heterodimer, this cluster triggers signaling from the cell surface, leading to the NF-kappa-B-dependent production of TNF, via MYD88 signaling pathway and subsequently is targeted to the Golgi in a lipid-raft dependent pathway. (Microbial infection) Directly mediates cytoadherence of Plasmodium falciparum parasitized erythrocytes and the internalization of particles independently of TLR signaling.
Subunit / interactions. Interacts with THBS1 and THBS2; the interactions mediate the THBS antiangiogenic activity. Upon interaction with a ligand, such as oxidized low-density lipoprotein (oxLDL) or amyloid-beta 42, rapidly forms a complex with TLR4 and TLR6; the complex is internalized and triggers an inflammatory signal. Through its C-terminus, interacts with PTK2, PXN and LYN, but not with SRC. LYN kinase activity is required for facilitating TLR4:TLR6 heterodimerization and signal initiation. Upon interaction with ligands such as diacylated lipopeptides, interacts with the TLR2:TLR6 heterodimer. Interacts with CD9, CD81, FCER1G, ITGB2 and/or ITGB2; forming a membrane heteromeric complex required for the internalization of CD36 and its ligands. Interacts (when palmitoylated) with ARF6; this interaction mediates CD36 transport to the plasma membrane. (Microbial infection) Binds to Plasmodium falciparum EMP1.
Subcellular location. Cell membrane. Membrane raft. Golgi apparatus. Apical cell membrane.
Post-translational modifications. N-glycosylated and O-glycosylated with a ratio of 2:1. Palmitoylated by ZDHHC5. Palmitoylation is required for proper localization at the plasma membrane. Ubiquitinated at Lys-469 and Lys-472. Ubiquitination is induced by fatty acids such as oleic acid and leads to degradation by the proteasome. Ubiquitination and degradation are inhibited by insulin which blocks the effect of fatty acids.
Disease relevance. Platelet glycoprotein IV deficiency (PG4D) [MIM:608404] A disorder characterized by macrothrombocytopenia without notable hemostatic problems and bleeding tendency. Platelet glycoprotein IV deficiency can be divided into 2 subgroups. The type I phenotype is characterized by platelets and monocytes/macrophages exhibiting complete CD36 deficiency. The type II phenotype lacks the surface expression of CD36 in platelets, but expression in monocytes/macrophages is near normal. The disease is caused by variants affecting the gene represented in this entry. Patients also have postprandial hypertriglyceridemia, insulin resistance and hypertension increasing atherosclerotic risk. Coronary heart disease 7 (CHDS7) [MIM:610938] A multifactorial disease characterized by an imbalance between myocardial functional requirements and the capacity of the coronary vessels to supply sufficient blood flow. Decreased capacity of the coronary vessels is often associated with thickening and loss of elasticity of the coronary arteries. Disease susceptibility is associated with variants affecting the gene represented in this entry.
Polymorphism. Genetic variations in CD36 are involved in susceptibility to malaria and influence the severity and outcome of malaria infection [MIM:611162].
Similarity. Belongs to the CD36 family.
Isoforms (4)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P16671-1 | 1 | yes |
| P16671-2 | 2, ex8-del | |
| P16671-3 | 3, ex6-7-del | |
| P16671-4 | 4, ex4-del |
RefSeq proteins (15): NP_000063, NP_001001547, NP_001001548, NP_001120915, NP_001120916, NP_001276837, NP_001276838, NP_001276840, NP_001358003, NP_001358004, NP_001358006, NP_001358007, NP_001358008, NP_001358009, NP_001358010 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002159 | CD36_fam | Family |
| IPR005428 | CD36/SCARB1/SNMP1 | Family |
Pfam: PF01130
Catalyzed reactions (Rhea), 10 shown:
- (9Z)-octadecenoate(out) = (9Z)-octadecenoate(in) (RHEA:33655)
- a fatty acid(in) = a fatty acid(out) (RHEA:38879)
- a long-chain fatty acid(out) = a long-chain fatty acid(in) (RHEA:39283)
- octadecanoate(in) = octadecanoate(out) (RHEA:39807)
- butanoate(out) = butanoate(in) (RHEA:45248)
- tetradecanoate(out) = tetradecanoate(in) (RHEA:45252)
- hexadecanoate(out) = hexadecanoate(in) (RHEA:45256)
- tetracosanoate(out) = tetracosanoate(in) (RHEA:45260)
- (9Z,12Z)-octadecadienoate(out) = (9Z,12Z)-octadecadienoate(in) (RHEA:45264)
- (5Z,8Z,11Z,14Z)-eicosatetraenoate(out) = (5Z,8Z,11Z,14Z)-eicosatetraenoate(in) (RHEA:71395)
UniProt features (98 total): strand 23, helix 18, sequence variant 11, glycosylation site 10, turn 6, lipid moiety-binding region 4, splice variant 4, mutagenesis site 4, topological domain 3, disulfide bond 3, sequence conflict 3, cross-link 2, transmembrane region 2, region of interest 2, initiator methionine 1, chain 1, site 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5LGD | X-RAY DIFFRACTION | 2.07 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P16671-F1 | 94.14 | 0.84 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 463 (critical for tlr4-tlr6 dimerization and signaling)
Post-translational modifications (6): 3, 7, 464, 466, 469, 472
Disulfide bonds (3): 243–311, 272–333, 313–322
Glycosylation sites (10): 79, 102, 134, 163, 205, 220, 235, 247, 321, 417
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 462–472 | no effect on cell surface location. loss of oxldl-induced nf-kappa-b activation. |
| 463 | no effect on cell surface location. loss of oxldl-induced nf-kappa-b activation. loss of complex formation with tlr4 and |
| 464 | no effect on cell surface location, nor on oxldl-induced nf-kappa-b activation. |
| 469–472 | abolishes ubiquitination induced by lipids. enhances fatty acid uptake. |
Function
Pathways and Gene Ontology
Reactome pathways
47 pathways
| ID | Pathway |
|---|---|
| R-HSA-114608 | Platelet degranulation |
| R-HSA-1236973 | Cross-presentation of particulate exogenous antigens (phagosomes) |
| R-HSA-1236974 | ER-Phagosome pathway |
| R-HSA-166058 | MyD88:MAL(TIRAP) cascade initiated on plasma membrane |
| R-HSA-168188 | Toll Like Receptor TLR6:TLR2 Cascade |
| R-HSA-1989781 | PPARA activates gene expression |
| R-HSA-3000471 | Scavenging by Class B Receptors |
| R-HSA-381340 | Transcriptional regulation of white adipocyte differentiation |
| R-HSA-434313 | Intracellular metabolism of fatty acids regulates insulin secretion |
| R-HSA-5602498 | MyD88 deficiency (TLR2/4) |
| R-HSA-5603041 | IRAK4 deficiency (TLR2/4) |
| R-HSA-5686938 | Regulation of TLR by endogenous ligand |
| R-HSA-6785807 | Interleukin-4 and Interleukin-13 signaling |
| R-HSA-6798695 | Neutrophil degranulation |
| R-HSA-9841922 | MLL4 and MLL3 complexes regulate expression of PPARG target genes in adipogenesis and hepatic steatosis |
| R-HSA-109582 | Hemostasis |
| R-HSA-1236975 | Antigen processing-Cross presentation |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-1280215 | Cytokine Signaling in Immune system |
| R-HSA-1280218 | Adaptive Immune System |
| R-HSA-1430728 | Metabolism |
| R-HSA-163685 | Integration of energy metabolism |
| R-HSA-1643685 | Disease |
| R-HSA-166016 | Toll Like Receptor 4 (TLR4) Cascade |
| R-HSA-168179 | Toll Like Receptor TLR1:TLR2 Cascade |
| R-HSA-168249 | Innate Immune System |
| R-HSA-168256 | Immune System |
| R-HSA-168898 | Toll-like Receptor Cascades |
| R-HSA-181438 | Toll Like Receptor 2 (TLR2) Cascade |
| R-HSA-212165 | Epigenetic regulation of gene expression |
MSigDB gene sets: 688 (showing top):
GOBP_CELLULAR_RESPONSE_TO_LIPOPROTEIN_PARTICLE_STIMULUS, REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION, GOBP_DIGESTION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_REGULATION_OF_LIPID_STORAGE, REACTOME_INNATE_IMMUNE_SYSTEM, CHIBA_RESPONSE_TO_TSA_UP, GOBP_POSITIVE_REGULATION_OF_ENDOCYTOSIS, KEGG_ADIPOCYTOKINE_SIGNALING_PATHWAY, GOBP_REGULATION_OF_WOUND_HEALING, GOBP_CIRCULATORY_SYSTEM_PROCESS, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_INFLAMMATORY_RESPONSE
GO Biological Process (85): negative regulation of transcription by RNA polymerase II (GO:0000122), MAPK cascade (GO:0000165), positive regulation of cell-matrix adhesion (GO:0001954), production of molecular mediator involved in inflammatory response (GO:0002532), lipid metabolic process (GO:0006629), fatty acid metabolic process (GO:0006631), receptor-mediated endocytosis (GO:0006898), phagocytosis, recognition (GO:0006910), phagocytosis, engulfment (GO:0006911), inflammatory response (GO:0006954), cell adhesion (GO:0007155), cell surface receptor signaling pathway (GO:0007166), positive regulation of cytosolic calcium ion concentration (GO:0007204), blood coagulation (GO:0007596), positive regulation of gene expression (GO:0010628), negative regulation of gene expression (GO:0010629), positive regulation of macrophage derived foam cell differentiation (GO:0010744), positive regulation of cholesterol storage (GO:0010886), fatty acid transport (GO:0015908), long-chain fatty acid transport (GO:0015909), long-chain fatty acid import across plasma membrane (GO:0015911), short-chain fatty acid transport (GO:0015912), negative regulation of angiogenesis (GO:0016525), lipid storage (GO:0019915), obsolete cGMP-mediated signaling (GO:0019934), positive regulation of blood coagulation (GO:0030194), intestinal cholesterol absorption (GO:0030299), cholesterol transport (GO:0030301), receptor internalization (GO:0031623), regulation of lipopolysaccharide-mediated signaling pathway (GO:0031664), positive regulation of interleukin-1 beta production (GO:0032731), positive regulation of interleukin-12 production (GO:0032735), positive regulation of interleukin-6 production (GO:0032755), positive regulation of tumor necrosis factor production (GO:0032760), response to lipid (GO:0033993), regulation of toll-like receptor signaling pathway (GO:0034121), positive regulation of toll-like receptor 4 signaling pathway (GO:0034145), triglyceride transport (GO:0034197), plasma lipoprotein particle clearance (GO:0034381), low-density lipoprotein particle clearance (GO:0034383)
GO Molecular Function (18): amyloid-beta binding (GO:0001540), low-density lipoprotein particle receptor activity (GO:0005041), scavenger receptor activity (GO:0005044), long-chain fatty acid transmembrane transporter activity (GO:0005324), high-density lipoprotein particle binding (GO:0008035), lipid binding (GO:0008289), short-chain fatty acid transmembrane transporter activity (GO:0015636), low-density lipoprotein particle binding (GO:0030169), Toll-like receptor binding (GO:0035325), cargo receptor activity (GO:0038024), protein-containing complex binding (GO:0044877), transforming growth factor beta binding (GO:0050431), thrombospondin receptor activity (GO:0070053), lipoteichoic acid immune receptor activity (GO:0070892), lipoprotein particle binding (GO:0071813), oxidised low-density lipoprotein particle receptor activity (GO:0150025), oleate transmembrane transporter activity (GO:1901480), protein binding (GO:0005515)
GO Cellular Component (18): obsolete extracellular space (GO:0005615), Golgi apparatus (GO:0005794), plasma membrane (GO:0005886), caveola (GO:0005901), external side of plasma membrane (GO:0009897), cell surface (GO:0009986), membrane (GO:0016020), endocytic vesicle membrane (GO:0030666), platelet alpha granule membrane (GO:0031092), brush border membrane (GO:0031526), specific granule membrane (GO:0035579), signaling receptor complex (GO:0043235), membrane raft (GO:0045121), phagocytic vesicle (GO:0045335), cell periphery (GO:0071944), collagen trimer (GO:0005581), apical plasma membrane (GO:0016324), apical part of cell (GO:0045177)
Reactome top-level categories
Rollup of top-17 pathways:
| Category | Pathways |
|---|---|
| Antigen processing-Cross presentation | 2 |
| Diseases associated with the TLR signaling cascade | 2 |
| Immune System | 2 |
| Response to elevated platelet cytosolic Ca2+ | 1 |
| Toll Like Receptor 4 (TLR4) Cascade | 1 |
| Toll Like Receptor TLR1:TLR2 Cascade | 1 |
| Toll Like Receptor TLR6:TLR2 Cascade | 1 |
| Toll Like Receptor 2 (TLR2) Cascade | 1 |
| Regulation of lipid metabolism by PPARalpha | 1 |
| Binding and Uptake of Ligands by Scavenger Receptors | 1 |
| Adipogenesis | 1 |
| Free fatty acids regulate insulin secretion | 1 |
| Toll-like Receptor Cascades | 1 |
| Signaling by Interleukins | 1 |
| Innate Immune System | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| binding | 3 |
| phagocytosis | 2 |
| cargo receptor activity | 2 |
| gene expression | 2 |
| regulation of gene expression | 2 |
| lipoprotein particle receptor activity | 2 |
| fatty acid transmembrane transporter activity | 2 |
| lipoprotein particle binding | 2 |
| endocytic vesicle | 2 |
| secretory granule membrane | 2 |
| protein-containing complex | 2 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| negative regulation of DNA-templated transcription | 1 |
| intracellular signaling cassette | 1 |
| regulation of cell-matrix adhesion | 1 |
| cell-matrix adhesion | 1 |
| positive regulation of cell-substrate adhesion | 1 |
| inflammatory response | 1 |
| multicellular organismal process | 1 |
| primary metabolic process | 1 |
| lipid metabolic process | 1 |
| monocarboxylic acid metabolic process | 1 |
| endocytosis | 1 |
| cell recognition | 1 |
| plasma membrane invagination | 1 |
| defense response | 1 |
| cellular process | 1 |
| signal transduction | 1 |
| regulation of biological quality | 1 |
| hemostasis | 1 |
| wound healing | 1 |
| coagulation | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| negative regulation of macromolecule biosynthetic process | 1 |
| macrophage derived foam cell differentiation | 1 |
| regulation of macrophage derived foam cell differentiation | 1 |
| positive regulation of cell differentiation | 1 |
| cholesterol storage | 1 |
Protein interactions and networks
STRING
5204 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CD36 | TLR2 | O60603 | 996 |
| CD36 | THBS1 | P07996 | 996 |
| CD36 | TLR4 | O00206 | 996 |
| CD36 | CD47 | Q08722 | 994 |
| CD36 | GP2 | P55259 | 994 |
| CD36 | TLR6 | Q9Y2C9 | 993 |
| CD36 | GP5 | P40197 | 991 |
| CD36 | CD163 | Q86VB7 | 976 |
| CD36 | LYN | P07948 | 973 |
| CD36 | FYN | P06241 | 958 |
| CD36 | CAV1 | Q03135 | 956 |
| CD36 | THBS2 | P35442 | 954 |
| CD36 | TLR1 | Q15399 | 930 |
| CD36 | APOB | P04114 | 917 |
| CD36 | FCGR3A | P08637 | 916 |
| CD36 | FCGR3B | O75015 | 916 |
IntAct
26 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| THBS1 | CD36 | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| CD36 | UNG | psi-mi:“MI:0915”(physical association) | 0.560 |
| APP | CD36 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CD36 | LYN | psi-mi:“MI:0915”(physical association) | 0.500 |
| LYN | CD36 | psi-mi:“MI:0915”(physical association) | 0.500 |
| CD36 | LYN | psi-mi:“MI:0914”(association) | 0.500 |
| CD36 | PXN | psi-mi:“MI:0914”(association) | 0.460 |
| Scarb2 | CD36 | psi-mi:“MI:0915”(physical association) | 0.400 |
| CHRD | CD36 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CD36 | TLR4 | psi-mi:“MI:0914”(association) | 0.350 |
| CAND1 | GTPBP10 | psi-mi:“MI:0914”(association) | 0.350 |
| CD36 | TTMP | psi-mi:“MI:0914”(association) | 0.350 |
| VPS37C | psi-mi:“MI:0914”(association) | 0.350 | |
| SMPD2 | A2ML1 | psi-mi:“MI:0914”(association) | 0.350 |
| CD36 | dacD | psi-mi:“MI:0915”(physical association) | 0.000 |
| CD36 | icc | psi-mi:“MI:0915”(physical association) | 0.000 |
| yapE | CD36 | psi-mi:“MI:0915”(physical association) | 0.000 |
| mpaA | CD36 | psi-mi:“MI:0915”(physical association) | 0.000 |
| CD36 | cutA | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (38): CROT (Affinity Capture-MS), C3orf52 (Affinity Capture-MS), MBOAT7 (Affinity Capture-MS), CD36 (Affinity Capture-Western), IRS1 (Affinity Capture-Western), FYN (Affinity Capture-Western), APOB (Reconstituted Complex), GPC4 (Co-localization), GPC4 (Affinity Capture-Western), CD36 (Affinity Capture-Western), HSD11B1 (Reconstituted Complex), LDLR (Reconstituted Complex), VLDLR (Reconstituted Complex), FYN (Affinity Capture-Western), LYN (Affinity Capture-Western)
ESM2 similar proteins: B0X4H5, B2LT48, B2RFN2, B3MTS2, B3P048, B4GMC9, B4IKJ4, B4JG39, B4KB36, B4LYC5, B4NK88, B4PQC2, B4R136, B7Z031, C3U0S3, D2A0H5, E0W3E3, E1JI63, E2IHA6, E5EZW6, E5EZW7, E5EZW9, E5EZX0, O02351, O35114, P16671, P26201, P27615, P70110, P86905, Q07969, Q08857, Q09606, Q11124, Q14108, Q17A88, Q24046, Q27367, Q295A8, Q7Q6R1
Diamond homologs: B2RFN2, C3U0S3, E1JI63, P16671, P26201, P70110, Q07969, Q08857, Q7Q6R1, O18824, O35114, P27615, P97943, Q14108, Q27367, Q60417, Q61009, Q8SQC1, Q8WTV0, Q11124, Q55FQ9, Q9BKJ9, Q9XYS8, P86905
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| CD36 | “up-regulates quantity” | “Fatty acid” | relocalization |
| GRK2 | “down-regulates quantity by destabilization” | CD36 | phosphorylation |
| CD36 | down-regulates | Angiogenesis | |
| TFEB | “up-regulates quantity by expression” | CD36 | “transcriptional regulation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
341 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 29 |
| Likely pathogenic | 32 |
| Uncertain significance | 184 |
| Likely benign | 17 |
| Benign | 26 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1301547 | NM_001001548.3(CD36):c.667_671dup (p.Ala225fs) | Pathogenic |
| 1322041 | NM_001001548.3(CD36):c.638_639del (p.Lys213fs) | Pathogenic |
| 1322043 | NM_001001548.3(CD36):c.729C>A (p.Cys243Ter) | Pathogenic |
| 13540 | NM_001001548.3(CD36):c.760T>C (p.Phe254Leu) | Pathogenic |
| 13541 | NM_001001548.3(CD36):c.1237A>C (p.Ile413Leu) | Pathogenic |
| 1356762 | NM_001001548.3(CD36):c.1086_1109dup (p.Tyr370Ter) | Pathogenic |
| 155322 | GRCh38/hg38 7q21.11(chr7:80627421-80651297)x1 | Pathogenic |
| 1708387 | NM_001001548.3(CD36):c.120+1G>A | Pathogenic |
| 285207 | NM_001001548.3(CD36):c.1155del (p.Lys385fs) | Pathogenic |
| 3036442 | NM_001001548.3(CD36):c.1047_1051dup (p.Pro351fs) | Pathogenic |
| 3062947 | GRCh37/hg19 7q21.11(chr7:80107707-80303798)x1 | Pathogenic |
| 3374841 | NM_001001548.3(CD36):c.1062_1098dup (p.His367delinsArgThrTyrTer) | Pathogenic |
| 3779488 | NM_001001548.3(CD36):c.430-1G>C | Pathogenic |
| 3902427 | NM_001001548.3(CD36):c.15del (p.Asn6fs) | Pathogenic |
| 4076050 | GRCh37/hg19 7q21.11(chr7:80256738-80280613)x1 | Pathogenic |
| 4279118 | GRCh37/hg19 7q21.11(chr7:80256738-80276756)x1 | Pathogenic |
| 4279163 | GRCh37/hg19 7q21.11(chr7:80257096-80280613)x1 | Pathogenic |
| 442306 | GRCh37/hg19 7q21.11(chr7:80256737-80277776)x0 | Pathogenic |
| 685689 | GRCh37/hg19 7q21.11(chr7:80256254-80276756)x1 | Pathogenic |
| 686205 | GRCh37/hg19 7q21.11(chr7:80242420-80303812)x1 | Pathogenic |
| 686312 | GRCh37/hg19 7q21.11(chr7:80262999-80276756)x1 | Pathogenic |
| 686525 | GRCh37/hg19 7q21.11(chr7:80256737-80276756)x1 | Pathogenic |
| 686719 | GRCh37/hg19 7q21.11(chr7:80262999-80276756)x1 | Pathogenic |
| 686754 | GRCh37/hg19 7q21.11(chr7:80254791-80276756)x1 | Pathogenic |
| 688139 | GRCh37/hg19 7q21.11(chr7:80262999-80276756)x1 | Pathogenic |
| 688327 | GRCh37/hg19 7q21.11(chr7:80254409-80276756)x1 | Pathogenic |
| 688623 | GRCh37/hg19 7q21.11(chr7:80256737-80276756)x1 | Pathogenic |
| 689019 | GRCh37/hg19 7q21.11(chr7:80256888-80276756)x1 | Pathogenic |
| 987919 | NM_001001547.2:c.(?-183)(120_?)del | Pathogenic |
| 1302074 | NM_001001548.3(CD36):c.430-1G>A | Likely pathogenic |
SpliceAI
6221 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 7:80414611:A:G | donor_gain | 1.0000 |
| 7:80458861:CCT:C | acceptor_gain | 1.0000 |
| 7:80458863:T:C | acceptor_gain | 1.0000 |
| 7:80462324:C:CT | acceptor_gain | 1.0000 |
| 7:80462325:A:T | acceptor_gain | 1.0000 |
| 7:80478839:A:AC | donor_gain | 1.0000 |
| 7:80478840:C:CC | donor_gain | 1.0000 |
| 7:80478840:CTAAG:C | donor_gain | 1.0000 |
| 7:80488533:A:AC | donor_gain | 1.0000 |
| 7:80488534:C:CT | donor_gain | 1.0000 |
| 7:80488534:CTG:C | donor_gain | 1.0000 |
| 7:80488534:CTGCA:C | donor_gain | 1.0000 |
| 7:80494603:A:AC | donor_gain | 1.0000 |
| 7:80494604:C:CC | donor_gain | 1.0000 |
| 7:80541148:G:T | donor_gain | 1.0000 |
| 7:80656539:GCAA:G | acceptor_gain | 1.0000 |
| 7:80661049:T:A | acceptor_gain | 1.0000 |
| 7:80661062:GA:G | acceptor_gain | 1.0000 |
| 7:80661206:TGGCA:T | donor_gain | 1.0000 |
| 7:80661207:GGCA:G | donor_gain | 1.0000 |
| 7:80661207:GGCAG:G | donor_gain | 1.0000 |
| 7:80661208:GCA:G | donor_gain | 1.0000 |
| 7:80661208:GCAG:G | donor_gain | 1.0000 |
| 7:80661209:CAG:C | donor_loss | 1.0000 |
| 7:80661210:AGT:A | donor_loss | 1.0000 |
| 7:80661211:G:A | donor_loss | 1.0000 |
| 7:80661211:G:GG | donor_gain | 1.0000 |
| 7:80661212:TGA:T | donor_loss | 1.0000 |
| 7:80661213:G:GC | donor_loss | 1.0000 |
| 7:80661214:AG:A | donor_loss | 1.0000 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000027409 (7:80663604 G>A), RS1000032231 (7:80679458 T>C), RS1000107107 (7:80659528 C>T), RS1000114141 (7:80637436 C>A), RS1000129194 (7:80628340 C>G,T), RS1000191047 (7:80617349 CA>C,CAA), RS1000270618 (7:80674365 T>C), RS1000297566 (7:80608616 T>G), RS1000338107 (7:80679492 T>A), RS1000347504 (7:80641672 A>G), RS1000432594 (7:80660685 G>A), RS1000440867 (7:80620297 C>T), RS1000465011 (7:80661051 C>A,T), RS1000465877 (7:80629617 A>C,G), RS1000484969 (7:80641376 T>A)
Disease associations
OMIM: gene MIM:173510 | disease phenotypes: MIM:608404, MIM:610938, MIM:611162, MIM:231200, MIM:125853
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| platelet-type bleeding disorder 10 | Strong | Autosomal recessive |
Mondo (6): platelet-type bleeding disorder 10 (MONDO:0012031), coronary heart disease, susceptibility to, 7 (MONDO:0012585), malaria, susceptibility to (MONDO:0021024), osteopetrosis (MONDO:0017198), inherited bleeding disorder, platelet-type (MONDO:0000009), type 2 diabetes mellitus (MONDO:0005148)
Orphanet (3): Malaria (Orphanet:673), Osteopetrosis and related disorders (Orphanet:2781), Rare hemorrhagic disorder due to a platelet anomaly (Orphanet:248326)
HPO phenotypes
5 total (6 of 5 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0001873 | Thrombocytopenia |
| HP:0001892 | Abnormal bleeding |
| HP:0001902 | Giant platelets |
| HP:0003010 | Prolonged bleeding time |
| HP:0011002 | Osteopetrosis |
GWAS associations
45 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000407_1 | Left ventricular mass | 3.000000e-06 |
| GCST001632_4 | Response to fenofibrate | 8.000000e-08 |
| GCST002043_2 | HDL cholesterol | 6.000000e-10 |
| GCST003542_206 | Night sleep phenotypes | 3.000000e-06 |
| GCST004599_53 | Mean platelet volume | 5.000000e-12 |
| GCST004601_98 | Red blood cell count | 2.000000e-12 |
| GCST004602_54 | Mean corpuscular volume | 1.000000e-13 |
| GCST004603_39 | Platelet count | 4.000000e-12 |
| GCST005991_90 | Platelet count | 2.000000e-17 |
| GCST005992_31 | Mean corpuscular hemoglobin concentration | 4.000000e-11 |
| GCST005999_16 | Aspartate aminotransferase levels | 3.000000e-14 |
| GCST006005_13 | High density lipoprotein cholesterol levels | 5.000000e-21 |
| GCST006585_627 | Blood protein levels | 1.000000e-06 |
| GCST006611_151 | HDL cholesterol | 3.000000e-27 |
| GCST006804_111 | Red cell distribution width | 2.000000e-17 |
| GCST008047_5 | Platelet count | 3.000000e-09 |
| GCST008075_12 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 6.000000e-45 |
| GCST008075_147 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 6.000000e-51 |
| GCST008075_98 | HDL cholesterol levels x alcohol consumption (regular vs non-regular drinkers) interaction (2df) | 5.000000e-08 |
| GCST008084_166 | HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 2.000000e-08 |
| GCST008084_63 | HDL cholesterol levels x alcohol consumption (drinkers vs non-drinkers) interaction (2df) | 5.000000e-08 |
| GCST008085_189 | HDL cholesterol levels in current drinkers | 5.000000e-06 |
| GCST008085_71 | HDL cholesterol levels in current drinkers | 2.000000e-07 |
| GCST010396_259 | Gut microbiota (bacterial taxa, hurdle binary method) | 2.000000e-07 |
| GCST010396_277 | Gut microbiota (bacterial taxa, hurdle binary method) | 4.000000e-06 |
| GCST010796_591 | Electrocardiogram morphology (amplitude at temporal datapoints) | 3.000000e-08 |
| GCST011010_14 | Electrocardiographic traits (multivariate) | 5.000000e-09 |
| GCST011348_13 | High density lipoprotein cholesterol levels | 1.000000e-18 |
| GCST011351_11 | Aspartate aminotransferase levels | 1.000000e-12 |
| GCST012032_7 | Platelet count | 6.000000e-08 |
EFO canonical traits (14, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0008205 | left ventricular structural measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004305 | erythrocyte count |
| EFO:0004309 | platelet count |
| EFO:0004528 | mean corpuscular hemoglobin concentration |
| EFO:0004736 | aspartate aminotransferase measurement |
| EFO:0009188 | Red cell distribution width |
| EFO:0004329 | alcohol drinking |
| EFO:0007874 | gut microbiome measurement |
| EFO:0004327 | electrocardiography |
| EFO:0005090 | basophil count |
| EFO:0004509 | hemoglobin measurement |
| EFO:0010701 | mean reticulocyte volume |
| EFO:0007985 | platelet crit |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D003924 | Diabetes Mellitus, Type 2 | C18.452.394.750.149; C19.246.300 |
| D010022 | Osteopetrosis | C05.116.099.708.702.678 |
| C564245 | Platelet Glycoprotein IV Deficiency (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1744526 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: other protein — CD molecules
Most potent curated ligand interactions (2 total), top 2:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| peptide 1 [PMID: 31774287] | Antagonist | 7.1 | pKd |
| compound 3c [PMID: 30360354] | Antagonist | 5.6 | pIC50 |
ChEMBL bioactivities
1 potent at pChembl≥5 of 1 total, top 1 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 5.40 | IC50 | 4000 | nM | CHEMBL6161924 |
CTD chemical–gene interactions
186 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Rosiglitazone | affects cotreatment, decreases reaction, increases expression, increases reaction, affects reaction (+1 more) | 16 |
| bisphenol A | increases methylation, increases activity, increases response to substance, affects reaction, decreases reaction (+2 more) | 9 |
| Tetradecanoylphorbol Acetate | affects cotreatment, increases expression, decreases reaction, increases reaction, decreases expression | 9 |
| Troglitazone | decreases expression, decreases reaction, increases expression | 6 |
| Oleic Acid | affects cotreatment, increases expression, decreases reaction | 6 |
| Tetrachlorodibenzodioxin | decreases ubiquitination, decreases reaction, increases expression, affects cotreatment, decreases expression | 5 |
| Valproic Acid | decreases reaction, increases expression, increases methylation | 5 |
| Palmitic Acid | decreases reaction, increases expression, affects cotreatment, decreases expression | 5 |
| Pioglitazone | increases expression, affects reaction, affects cotreatment, decreases expression, decreases reaction | 4 |
| Amiodarone | increases expression, decreases expression | 4 |
| Aflatoxin B1 | decreases expression, decreases methylation, increases expression | 4 |
| 2-chloro-5-nitrobenzanilide | decreases expression, decreases reaction, affects cotreatment, increases expression | 3 |
| Resveratrol | decreases expression, decreases reaction, increases expression | 3 |
| Acetylcysteine | increases expression, decreases reaction | 3 |
| Dexamethasone | decreases reaction, affects reaction, affects binding, increases reaction, increases expression | 3 |
| Estradiol | affects cotreatment, increases expression, decreases expression | 3 |
| Quercetin | affects cotreatment, decreases reaction, increases expression, decreases expression | 3 |
| Tamoxifen | affects cotreatment, increases expression, decreases reaction, affects binding, decreases expression | 3 |
| Tobacco Smoke Pollution | decreases expression | 3 |
| fluorotelomer sulfonic acids | increases uptake, decreases expression | 2 |
| sodium arsenate | decreases expression, increases abundance | 2 |
| perfluorooctanoic acid | increases expression | 2 |
| nickel sulfate | decreases expression | 2 |
| perfluorooctane sulfonic acid | increases uptake, increases expression | 2 |
| 2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-one | increases expression, affects cotreatment, decreases reaction | 2 |
| 2-(2-amino-3-methoxyphenyl)-4H-1-benzopyran-4-one | increases expression, decreases reaction | 2 |
| GW 7647 | affects cotreatment, increases expression | 2 |
| T 0070907 | decreases reaction, increases expression | 2 |
| 15-deoxyprostaglandin J2 | increases reaction, affects cotreatment, increases expression | 2 |
| bisphenol B | decreases expression, increases expression | 2 |
ChEMBL screening assays
6 unique, capped per target: 5 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1764258 | Binding | Antagonist activity at human CD36-oxLDL binding at 1 uM after 2 hrs by ELISA | Synthesis and structure-activity relationship of N-(2-arylethyl) isoquinoline derivatives as human scavenger receptor CD36 antagonists. — Eur J Med Chem |
| CHEMBL1764260 | Functional | Antagonist activity at human CD36 expressed in insect Sf9 cells assessed as inhibition of DiL-acetylated LDL uptake at 10 ug/ml after 5 hrs by fluorometric analysis | Synthesis and structure-activity relationship of N-(2-arylethyl) isoquinoline derivatives as human scavenger receptor CD36 antagonists. — Eur J Med Chem |
Cellosaurus cell lines
9 cell lines: 7 cancer cell line, 1 spontaneously immortalized cell line, 1 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_8848 | CHO-CD36 | Spontaneously immortalized cell line | Female |
| CVCL_B5FY | SYSUSCi002-A | Induced pluripotent stem cell | Female |
| CVCL_B7WH | Abcam Raji CD36 KO | Cancer cell line | Male |
| CVCL_B9X2 | Abcam THP-1 CD36 KO | Cancer cell line | Male |
| CVCL_C0UP | HP-Nak | Cancer cell line | Female |
| CVCL_C6Z0 | Abcam PC-3 CD36 KO | Cancer cell line | Male |
| CVCL_E8DS | BPS Bioscience THP-1 CD36 KO | Cancer cell line | Male |
| CVCL_SH71 | HAP1 CD36 (-) 1 | Cancer cell line | Male |
| CVCL_XM58 | HAP1 CD36 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT06630572 | PHASE4 | TERMINATED | Rifaximin in Cirrhosis: Effects on Endotoxin and Haemostatic Indexes |
| NCT00006163 | PHASE4 | COMPLETED | Computer-assisted Diabetes Self-management Interventions |
| NCT00036504 | PHASE4 | COMPLETED | Efficacy and Safety of Twice-Daily Insulin Lispro Low Mixture Compared to a Once-Daily Long Acting Insulin Comparator in Patients Who Have Been Using One or More Oral Antihyperglycemic Agents Without Insulin |
| NCT00044460 | PHASE4 | COMPLETED | Efficacy and Safety In Poorly Controlled Type 2 Diabetics |
| NCT00095446 | PHASE4 | COMPLETED | NovoLog Observation Trial in Subjects With Type 1 and Type 2 Diabetes |
| NCT00101751 | PHASE4 | COMPLETED | INITIATE Plus (INITiation of Insulin to Reach A1c TargEt) Study |
| NCT00110370 | PHASE4 | COMPLETED | Comparing Pre-Mixed Insulin With Insulin Glargine Combined With Rapid-Acting Insulin in Patients With Type 2 Diabetes |
| NCT00110448 | PHASE4 | COMPLETED | Japanese Primary Prevention of Atherosclerosis With Aspirin for Diabetes (JPAD) Trial |
| NCT00118950 | PHASE4 | COMPLETED | Effect of Metformin Versus Repaglinide Treatment in Non-Obese Type 2 Diabetic Patients Uncontrolled by Diet |
| NCT00118963 | PHASE4 | COMPLETED | Effect of Repaglinide Versus Metformin Treatment in Non-Obese Patients With Type-2-Diabetes |
| NCT00121966 | PHASE4 | COMPLETED | South Danish Diabetes Study: Evaluation of the Antidiabetic Treatment of Type 2 Diabetes Mellitus |
| NCT00123604 | PHASE4 | COMPLETED | Vascular Effects of Carvedilol Versus Metoprolol in Hypertensive Patients With Type 2 Diabetes |
| NCT00123643 | PHASE4 | COMPLETED | Vascular Effects of Rosiglitazone Versus Glyburide in Type 2 Diabetic Patients |
| NCT00124397 | PHASE4 | COMPLETED | Atorvastatin and Endothelial Function in Type 2 Diabetes Mellitus (ATTEND-Study) |
| NCT00129233 | PHASE4 | COMPLETED | Comparison of Valsartan With Amlodipine in Hypertensive Patients With Glucose Intolerance |
| NCT00133718 | PHASE4 | COMPLETED | A 2 Year Trial of Patients With Type 2 Diabetes Focusing on Cardiovascular Diagnostics and Metabolic Control |
| NCT00135070 | PHASE4 | TERMINATED | Hospital In-Patient Insulin Study |
| NCT00141232 | PHASE4 | COMPLETED | Evaluating Atorvastatin With Omega-3 Fatty Acids in Cardiovascular Risk Reduction in Patients With Type 2 Diabetes |
| NCT00144144 | PHASE4 | UNKNOWN | A Study on Ca Blocker Versus AII Antagonists in Hypertension With Type 2 Diabetes |
| NCT00149331 | PHASE4 | COMPLETED | The Effects of Two Education Strategies About Insulin on Patient Preferences and Perceptions About Insulin Therapy |
| NCT00162357 | PHASE4 | COMPLETED | Post-PCI:Cardiac Imaging in Patients With Diabetes to Detect Coronary Artery Blockages Previously Opened by Angioplasty |
| NCT00174681 | PHASE4 | COMPLETED | Tulip Study: Testing the Usefulness of Lantus When Initiated Prematurely In Patients With Type 2 Diabetes |
| NCT00174824 | PHASE4 | COMPLETED | Comparison of Insulin Glargine and NPH Human Insulin in Progression of Diabetic Retinopathy in Type 2 Diabetic Patients |
| NCT00177398 | PHASE4 | COMPLETED | Effect of Glargine Insulin on Glucose Control in Hospitalized Patients Who Receive Tube Feedings |
| NCT00179400 | PHASE4 | COMPLETED | The Role of Acute Combined PPAR Alpha and Gamma Stimulation on Insulin Action in Humans |
| NCT00184561 | PHASE4 | COMPLETED | Effectiveness and Safety of Biphasic Insulin Aspart 70/30 in Subjects With Type 2 Diabetes |
| NCT00184626 | PHASE4 | COMPLETED | Comparison of Insulin Glargine Versus Biphasic Insulin Aspart 30/70 or Biphasic Insulin Aspart 30/70 in Combination With Metformin in Subjects With Type 2 Diabetes. |
| NCT00191178 | PHASE4 | COMPLETED | Effects of Insulin in Perceived Mood Symptoms in Patients With Type 2 Diabetes |
| NCT00191282 | PHASE4 | COMPLETED | Hyperglycemia and Cardiovascular Outcomes With Type 2 Diabetes |
| NCT00191464 | PHASE4 | COMPLETED | Long-Term Effects of Insulin Plus Metformin Regimens on the Overall and Postprandial Glycemic Control of Patients With Type 2 Diabetes |
| NCT00192803 | PHASE4 | UNKNOWN | Non-Insulin Dependent Diabetes Mellitus (NIDDM) and Angiotensin Converting Enzyme 2 (ACE2): Diabetic Patients Treated With Antihypertensive Drugs |
| NCT00202033 | PHASE4 | COMPLETED | Impact of Self-Monitoring Blood Glucose Frequency on Glycemic Control in Patients With Type 2 Diabetes |
| NCT00205660 | PHASE4 | COMPLETED | Changes in Adiposity, Metabolic Measures From Atypicals to Aripiprazole |
| NCT00212290 | PHASE4 | COMPLETED | Insulin Resistance and Central Nervous System (CNS) Function in Type 2 Diabetes |
| NCT00212303 | PHASE4 | COMPLETED | Exercise Training in Type 2 Diabetes and Hypertension |
| NCT00225342 | PHASE4 | WITHDRAWN | Study Protocol for Rosiglitazone Versus Gliclazide in Diabetics With Angina |
| NCT00238472 | PHASE4 | COMPLETED | A Pilot Study to Evaluate the Effects of Nateglinide vs. Glibenclamide on Renal Hemodynamics and Albumin Excretion |
| NCT00239538 | PHASE4 | COMPLETED | SMOOTH - Blood Pressure Control in Diabetic/Obese Patients |
| NCT00240253 | PHASE4 | COMPLETED | A Study Evaluating the Efficacy and Safety of Adding Symlin® to Lantus® (Insulin Glargine) in Subjects With Type 2 Diabetes |
| NCT00240422 | PHASE4 | COMPLETED | Trial to Compare the Effects of Either Telmisartan (40-80 mg PO Once Daily) or Ramipril (5-10 mg PO Once Daily) on Renal Endothelial Dysfunction in Hypertensive Patients With Type 2 Diabetes |
Related Atlas pages
- Associated diseases: platelet-type bleeding disorder 10
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): coronary heart disease, susceptibility to, 7, inherited bleeding disorder, platelet-type, malaria, susceptibility to, osteopetrosis, platelet-type bleeding disorder 10