CD81-AS1

Summary

CD81-AS1 (CD81 antisense RNA 1, HGNC:49384) is a long non-coding RNA gene on chromosome 11p15.5.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49384
Approved symbol	CD81-AS1
Name	CD81 antisense RNA 1
Location	11p15.5
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000238184
Ensembl biotype	lncRNA
Entrez	101927682
RNAcentral	URS0000759B3A — lncRNA, 1186 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000413483, ENST00000427151

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000413483 — 3 exons

Exon	Start	End
ENSE00001658751	2334911	2335019
ENSE00001769558	2377586	2377992
ENSE00001784393	2328749	2329692

Expression profiles

Bgee: expression breadth ubiquitous, 144 present calls, max score 81.23.

FANTOM5 (CAGE): breadth broad, TPM avg 1.2942 / max 21.3712, expressed in 762 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
118216	1.2942	762

Top tissues by expression

232 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.23	gold quality
sural nerve	UBERON:0015488	66.37	gold quality
bone marrow cell	CL:0002092	65.30	silver quality
cortical plate	UBERON:0005343	62.88	gold quality
ventricular zone	UBERON:0003053	62.02	gold quality
ganglionic eminence	UBERON:0004023	59.54	gold quality
body of uterus	UBERON:0009853	56.83	gold quality
right lung	UBERON:0002167	55.94	gold quality
mucosa of stomach	UBERON:0001199	55.57	gold quality
left ovary	UBERON:0002119	55.48	gold quality
descending thoracic aorta	UBERON:0002345	55.04	gold quality
tibia	UBERON:0000979	54.93	gold quality
prefrontal cortex	UBERON:0000451	54.83	gold quality
popliteal artery	UBERON:0002250	54.26	gold quality
tibial artery	UBERON:0007610	54.25	gold quality
left uterine tube	UBERON:0001303	54.02	gold quality
right ovary	UBERON:0002118	53.95	gold quality
stromal cell of endometrium	CL:0002255	53.85	silver quality
ectocervix	UBERON:0012249	53.77	gold quality
granulocyte	CL:0000094	53.70	gold quality
aorta	UBERON:0000947	53.52	gold quality
muscle layer of sigmoid colon	UBERON:0035805	53.49	gold quality
skin of hip	UBERON:0001554	53.48	silver quality
endocervix	UBERON:0000458	53.44	gold quality
nasal cavity epithelium	UBERON:0005384	53.04	gold quality
ovary	UBERON:0000992	52.74	gold quality
thoracic aorta	UBERON:0001515	52.73	gold quality
monocyte	CL:0000576	52.49	gold quality
ascending aorta	UBERON:0001496	52.42	gold quality
right coronary artery	UBERON:0001625	52.39	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.62

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.