CDC20B
geneOn this page
Also known as FLJ37927
Summary
CDC20B (cell division cycle 20B, HGNC:24222) is a protein-coding gene on chromosome 5q11.2, encoding Cell division cycle protein 20 homolog B (Q86Y33). Protein regulator of centriole-deuterosome disengagement and subsequently participates in the ciliogenesis in multiciliated cells (MCCs).
Predicted to enable anaphase-promoting complex binding activity and ubiquitin ligase activator activity. Involved in de novo centriole assembly. Located in deuterosome.
Source: NCBI Gene 166979 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 109 total
- MANE Select transcript:
NM_001170402
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:24222 |
| Approved symbol | CDC20B |
| Name | cell division cycle 20B |
| Location | 5q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ37927 |
| Ensembl gene | ENSG00000164287 |
| Ensembl biotype | protein_coding |
| OMIM | 620335 |
| Entrez | 166979 |
Gene structure
Transcript identifiers
Ensembl transcripts: 5 — 3 protein_coding, 2 nonsense_mediated_decay
ENST00000296733, ENST00000322374, ENST00000381375, ENST00000507931, ENST00000513180
RefSeq mRNA: 3 — MANE Select: NM_001170402
NM_001145734, NM_001170402, NM_152623
CCDS: CCDS3966, CCDS47207, CCDS54852
Canonical transcript exons
ENST00000381375 — 12 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001083099 | 55133412 | 55133528 |
| ENSE00001083106 | 55128421 | 55128617 |
| ENSE00001083133 | 55127257 | 55127351 |
| ENSE00001083150 | 55140314 | 55140407 |
| ENSE00001263609 | 55143513 | 55143643 |
| ENSE00001263615 | 55146628 | 55146856 |
| ENSE00001263621 | 55172588 | 55172650 |
| ENSE00002042568 | 55112971 | 55114318 |
| ENSE00002050096 | 55172938 | 55173177 |
| ENSE00003469235 | 55120425 | 55120550 |
| ENSE00003553164 | 55119801 | 55119918 |
| ENSE00003624223 | 55124803 | 55125028 |
Expression profiles
Bgee: expression breadth broad, 50 present calls, max score 80.68.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1332 / max 23.0403, expressed in 43 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 61685 | 0.0714 | 29 |
| 61684 | 0.0618 | 19 |
Top tissues by expression
226 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| secondary oocyte | CL:0000655 | 80.68 | gold quality |
| buccal mucosa cell | CL:0002336 | 80.27 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 77.67 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 77.14 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 73.29 | gold quality |
| bronchial epithelial cell | CL:0002328 | 67.90 | gold quality |
| oviduct epithelium | UBERON:0004804 | 66.96 | gold quality |
| bronchus | UBERON:0002185 | 66.66 | gold quality |
| left testis | UBERON:0004533 | 62.96 | gold quality |
| testis | UBERON:0000473 | 62.33 | gold quality |
| right testis | UBERON:0004534 | 62.16 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 61.13 | silver quality |
| nasal cavity mucosa | UBERON:0001826 | 58.23 | gold quality |
| oocyte | CL:0000023 | 54.90 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 53.60 | gold quality |
| endometrium | UBERON:0001295 | 51.27 | gold quality |
| skin of hip | UBERON:0001554 | 51.05 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 51.04 | gold quality |
| lower lobe of lung | UBERON:0008949 | 50.77 | silver quality |
| biceps brachii | UBERON:0001507 | 49.27 | gold quality |
| fallopian tube | UBERON:0003889 | 48.02 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 46.00 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 45.94 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 45.78 | silver quality |
| upper leg skin | UBERON:0004262 | 45.15 | silver quality |
| middle temporal gyrus | UBERON:0002771 | 44.81 | gold quality |
| ventricular zone | UBERON:0003053 | 44.62 | gold quality |
| sural nerve | UBERON:0015488 | 44.28 | gold quality |
| kidney | UBERON:0002113 | 44.20 | gold quality |
| deltoid | UBERON:0001476 | 44.07 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-10283 | yes | 1153.01 |
| E-CURD-114 | yes | 652.81 |
| E-ANND-3 | yes | 4.99 |
| E-ENAD-27 | no | 3.75 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
92 targeting CDC20B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4455 | 100.00 | 65.48 | 1587 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-10401-5P | 99.99 | 65.79 | 948 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-302C-5P | 99.97 | 72.56 | 3642 |
| HSA-MIR-6825-5P | 99.96 | 69.81 | 3431 |
| HSA-MIR-651-3P | 99.94 | 73.48 | 5177 |
| HSA-MIR-3143 | 99.93 | 71.96 | 3104 |
| HSA-MIR-1305 | 99.91 | 71.43 | 3443 |
| HSA-MIR-1297 | 99.91 | 73.41 | 3162 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-548D-3P | 99.87 | 70.67 | 4362 |
| HSA-MIR-548BB-3P | 99.86 | 70.58 | 4354 |
| HSA-MIR-369-3P | 99.85 | 70.52 | 2264 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-548AC | 99.84 | 70.77 | 4351 |
| HSA-MIR-548H-3P | 99.84 | 70.80 | 4349 |
| HSA-MIR-548Z | 99.84 | 70.80 | 4349 |
| HSA-MIR-548AJ-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548F-5P | 99.78 | 71.02 | 3093 |
| HSA-MIR-548G-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-548X-5P | 99.78 | 71.12 | 3085 |
| HSA-MIR-1273H-5P | 99.77 | 66.32 | 2471 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-30B-3P | 99.70 | 65.76 | 2325 |
Literature-anchored findings (GeneRIF, showing 2)
- CDC20B protein associates to deuterosomes and is required for centriole release and subsequent cilia production. (PMID:30405130)
- Circular RNA hsa_circ_0008896 accelerates atherosclerosis by promoting the proliferation, migration and invasion of vascular smooth muscle cells via hsa-miR-633/CDC20B (cell division cycle 20B) axis. (PMID:35212610)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Cdc20b | ENSMUSG00000078926 |
| drosophila_melanogaster | fzy | FBGN0001086 |
Paralogs (2): FZR1 (ENSG00000105325), CDC20 (ENSG00000117399)
Protein
Protein identifiers
Cell division cycle protein 20 homolog B — Q86Y33 (reviewed: Q86Y33)
All UniProt accessions (1): Q86Y33
UniProt curated annotations — full annotation on UniProt →
Function. Protein regulator of centriole-deuterosome disengagement and subsequently participates in the ciliogenesis in multiciliated cells (MCCs).
Subcellular location. Cytoplasm.
Tissue specificity. Expressed in multiciliated cells (MCCs).
Similarity. Belongs to the WD repeat CDC20/Fizzy family.
Isoforms (5)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q86Y33-1 | 1 | yes |
| Q86Y33-2 | 2 | |
| Q86Y33-3 | 3 | |
| Q86Y33-4 | 4 | |
| Q86Y33-5 | 5 |
RefSeq proteins (3): NP_001139206, NP_001163873, NP_689836 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001680 | WD40_rpt | Repeat |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Homologous_superfamily |
| IPR019775 | WD40_repeat_CS | Conserved_site |
| IPR033010 | Cdc20/Fizzy | Family |
| IPR036322 | WD40_repeat_dom_sf | Homologous_superfamily |
| IPR056150 | WD40_CDC20-Fz | Domain |
Pfam: PF24807
UniProt features (24 total): repeat 7, splice variant 7, sequence variant 6, compositionally biased region 2, chain 1, region of interest 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q86Y33-F1 | 69.60 | 0.50 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 120 (showing top):
E2F_Q4_01, GOBP_REGULATION_OF_PROTEASOMAL_UBIQUITIN_DEPENDENT_PROTEIN_CATABOLIC_PROCESS, BENPORATH_ES_WITH_H3K27ME3, GOBP_ANAPHASE_PROMOTING_COMPLEX_DEPENDENT_CATABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_PROTEIN_CATABOLIC_PROCESS, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, CCANNAGRKGGC_UNKNOWN, GOBP_CENTRIOLE_ASSEMBLY, E2F1DP1_01, E2F_Q3, E2F1DP2_01, GOBP_REGULATION_OF_CATABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_CATABOLIC_PROCESS, GOBP_ORGANELLE_ASSEMBLY, GOBP_REGULATION_OF_PROTEIN_CATABOLIC_PROCESS
GO Biological Process (4): anaphase-promoting complex-dependent catabolic process (GO:0031145), de novo centriole assembly (GO:0097742), positive regulation of anaphase-promoting complex-dependent catabolic process (GO:1905786), positive regulation of ubiquitin protein ligase activity (GO:1904668)
GO Molecular Function (4): anaphase-promoting complex binding (GO:0010997), ubiquitin ligase activator activity (GO:1990757), protein binding (GO:0005515), ubiquitin-protein transferase activator activity (GO:0097027)
GO Cellular Component (3): anaphase-promoting complex (GO:0005680), cytoplasm (GO:0005737), deuterosome (GO:0098536)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| proteasome-mediated ubiquitin-dependent protein catabolic process | 1 |
| centriole assembly | 1 |
| anaphase-promoting complex-dependent catabolic process | 1 |
| positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1 |
| regulation of anaphase-promoting complex-dependent catabolic process | 1 |
| positive regulation of ubiquitin-protein transferase activity | 1 |
| ubiquitin protein ligase activity | 1 |
| regulation of ubiquitin protein ligase activity | 1 |
| protein-containing complex binding | 1 |
| ubiquitin-protein transferase activator activity | 1 |
| positive regulation of ubiquitin protein ligase activity | 1 |
| binding | 1 |
| ubiquitin-protein transferase activity | 1 |
| enzyme activator activity | 1 |
| ubiquitin-protein transferase regulator activity | 1 |
| nuclear ubiquitin ligase complex | 1 |
| cullin-RING ubiquitin ligase complex | 1 |
| intracellular anatomical structure | 1 |
| cellular anatomical structure | 1 |
| intracellular membraneless organelle | 1 |
Protein interactions and networks
STRING
2867 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CDC20B | CDK6 | Q00534 | 745 |
| CDC20B | CDC25A | P30304 | 742 |
| CDC20B | CCNO | P22674 | 681 |
| CDC20B | E2F1 | Q01094 | 652 |
| CDC20B | DEUP1 | Q05D60 | 628 |
| CDC20B | MCIDAS | D6RGH6 | 591 |
| CDC20B | FOXJ1 | Q92949 | 485 |
| CDC20B | GMNC | A6NCL1 | 456 |
| CDC20B | LINC03043 | A4D0Y5 | 430 |
| CDC20B | FOXN4 | Q96NZ1 | 427 |
| CDC20B | OR5I1 | Q13606 | 420 |
| CDC20B | CCP110 | O43303 | 412 |
| CDC20B | HDAC1 | Q13547 | 393 |
| CDC20B | PTTG2 | Q9NZH5 | 387 |
| CDC20B | ESPL1 | Q14674 | 378 |
IntAct
42 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CDC20B | TRIM37 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRIM27 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | TRIM23 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MAGEA11 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| GOLGA2 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRAF2 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | KRT31 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | CCDC57 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | MTUS2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| KRT40 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| SPAG5 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | PLK2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | TRIM27 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | MAGEA11 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | GOLGA2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | TRAF2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MTUS2 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| CDC20B | KRT40 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRIM37 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
| TRIM23 | CDC20B | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (47): CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CDC20B (Two-hybrid), CCDC57 (Two-hybrid), CDC20B (Affinity Capture-MS), UBA5 (Affinity Capture-MS), MAN2C1 (Affinity Capture-MS)
ESM2 similar proteins: A0A1L8GXY4, A0A1L8I2C5, A1A5R7, A6PWY4, A9X1C6, B1ANS9, B2KIQ4, D3Z3I0, E9Q7R9, F1QHZ6, O13286, O74845, O94411, P26309, P43254, P51956, P93471, Q09786, Q4V837, Q5R6T6, Q5TKR9, Q5XHI9, Q5ZKI7, Q6DTM3, Q6GM71, Q6GPU3, Q6VZ17, Q7Z2W4, Q80Z32, Q86VD1, Q86Y33, Q8BZ21, Q8CDP0, Q8K3E5, Q8L4H0, Q8N157, Q8N4N8, Q8NA75, Q8NDM7, Q8NEM8
Diamond homologs: A0A1L8I2C5, A0A396ISC0, D3Z3I0, F4K5R6, O13286, O65418, O94423, P26309, P53197, P78972, Q12834, Q1HPW4, Q3E906, Q4PSE4, Q54KM3, Q54MZ3, Q5H7C0, Q62623, Q86Y33, Q8L3Z8, Q8LPL5, Q8VZS9, Q9FN19, Q9JJ66, Q9M7I2, Q9R1K5, Q9S7H3, Q9S7I8, Q9SZA4, Q9UM11, A3LQ86, O94411, O94620, P25387, Q09786, Q15269, Q5RFQ3, Q8NEZ3, Q93134, Q9P783
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
109 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 90 |
| Likely benign | 8 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2236 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 5:55125025:CCCA:C | acceptor_gain | 1.0000 |
| 5:55125026:CCA:C | acceptor_gain | 1.0000 |
| 5:55125026:CCAC:C | acceptor_gain | 1.0000 |
| 5:55125027:CA:C | acceptor_gain | 1.0000 |
| 5:55125027:CAC:C | acceptor_gain | 1.0000 |
| 5:55125029:C:CC | acceptor_gain | 1.0000 |
| 5:55128509:A:AC | donor_gain | 1.0000 |
| 5:55128509:AAGT:A | donor_gain | 1.0000 |
| 5:55128510:A:C | donor_gain | 1.0000 |
| 5:55133410:A:AC | donor_gain | 1.0000 |
| 5:55133411:C:CC | donor_gain | 1.0000 |
| 5:55160397:G:GG | donor_gain | 1.0000 |
| 5:55172586:A:AC | donor_gain | 1.0000 |
| 5:55172587:C:CC | donor_gain | 1.0000 |
| 5:55172646:CTTTC:C | acceptor_gain | 1.0000 |
| 5:55172934:TCAC:T | donor_loss | 1.0000 |
| 5:55172935:CA:C | donor_loss | 1.0000 |
| 5:55172936:A:AC | donor_gain | 1.0000 |
| 5:55172936:AC:A | donor_gain | 1.0000 |
| 5:55172936:ACC:A | donor_gain | 1.0000 |
| 5:55172937:C:CT | donor_gain | 1.0000 |
| 5:55172937:CC:C | donor_gain | 1.0000 |
| 5:55172937:CCC:C | donor_gain | 1.0000 |
| 5:55172937:CCCA:C | donor_gain | 1.0000 |
| 5:55125037:T:C | acceptor_gain | 0.9900 |
| 5:55125037:T:TC | acceptor_gain | 0.9900 |
| 5:55125040:C:CT | acceptor_gain | 0.9900 |
| 5:55127352:C:CC | acceptor_gain | 0.9900 |
| 5:55128419:A:AC | donor_gain | 0.9900 |
| 5:55128420:C:CC | donor_gain | 0.9900 |
AlphaMissense
3401 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 5:55127259:G:C | S329R | 0.996 |
| 5:55127259:G:T | S329R | 0.996 |
| 5:55127261:T:G | S329R | 0.996 |
| 5:55125028:A:C | S330R | 0.994 |
| 5:55125028:A:T | S330R | 0.994 |
| 5:55127258:T:G | S330R | 0.994 |
| 5:55125026:C:T | G331E | 0.991 |
| 5:55125027:C:A | G331W | 0.990 |
| 5:55124902:G:C | S372R | 0.988 |
| 5:55124902:G:T | S372R | 0.988 |
| 5:55124904:T:G | S372R | 0.988 |
| 5:55124931:A:G | W363R | 0.988 |
| 5:55124931:A:T | W363R | 0.988 |
| 5:55128443:C:T | G291D | 0.987 |
| 5:55128449:G:T | A289E | 0.986 |
| 5:55127279:A:G | W323R | 0.985 |
| 5:55127279:A:T | W323R | 0.985 |
| 5:55127348:A:G | W300R | 0.983 |
| 5:55127348:A:T | W300R | 0.983 |
| 5:55124803:C:A | K405N | 0.982 |
| 5:55124803:C:G | K405N | 0.982 |
| 5:55125024:A:G | S332P | 0.981 |
| 5:55128444:C:G | G291R | 0.980 |
| 5:55127263:A:G | L328P | 0.979 |
| 5:55128578:G:T | A246D | 0.979 |
| 5:55119872:C:T | G463D | 0.978 |
| 5:55128474:A:G | W281R | 0.977 |
| 5:55128474:A:T | W281R | 0.977 |
| 5:55127293:A:T | V318D | 0.976 |
| 5:55128450:C:G | A289P | 0.975 |
dbSNP variants (sampled 300 via entrez): RS1000008120 (5:55169268 A>T), RS1000013840 (5:55124488 T>G), RS1000032277 (5:55154524 A>G), RS1000064221 (5:55161974 G>A,T), RS1000079331 (5:55117900 A>C), RS1000204806 (5:55163201 T>C), RS1000259581 (5:55143723 T>C), RS1000294198 (5:55130790 G>A,C), RS1000317488 (5:55136908 C>A), RS1000321443 (5:55117099 T>A,G), RS1000327497 (5:55136592 A>G), RS1000336973 (5:55124751 A>G), RS1000390144 (5:55170864 A>G,T), RS1000459556 (5:55163629 C>T), RS1000543736 (5:55161750 A>G)
Disease associations
OMIM: gene MIM:620335 | disease phenotypes: MIM:613659
GenCC curated gene-disease
Mondo (1): gastric cancer (MONDO:0001056)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST008399_7 | Cocaine dependence | 8.000000e-06 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs10061133 | CDC20B, MIR449A, MIR449B | 0.00 | 0 |
CTD chemical–gene interactions
36 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | increases expression, increases methylation | 2 |
| Benzo(a)pyrene | decreases expression, increases methylation | 2 |
| tetrabromobisphenol S | increases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| methyleugenol | decreases expression | 1 |
| 2,3-pentanedione | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| tetrabromobisphenol A | increases expression | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression, affects cotreatment | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| abrine | increases expression | 1 |
| Grape Seed Proanthocyanidins | decreases expression, affects cotreatment | 1 |
| 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine | increases expression, increases response to substance | 1 |
| Rosiglitazone | decreases expression | 1 |
| Troglitazone | decreases expression | 1 |
| Vorinostat | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Cadmium | decreases expression, increases abundance | 1 |
| Catechin | affects cotreatment, decreases expression | 1 |
| Diacetyl | decreases expression | 1 |
| Diethylhexyl Phthalate | decreases expression | 1 |
| Endosulfan | affects cotreatment, decreases expression | 1 |
| Estradiol | decreases expression | 1 |
| Lead | decreases expression | 1 |
| Lipopolysaccharides | increases expression, affects response to substance, affects cotreatment | 1 |
| Smoke | increases abundance, increases expression | 1 |
| Tetrachlorodibenzodioxin | affects cotreatment, decreases expression | 1 |
| Thimerosal | increases expression | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00365508 | PHASE4 | COMPLETED | Counseling and Nicotine Replacement Therapy in Helping Adult Smokers Quit Smoking |
| NCT00558155 | PHASE4 | COMPLETED | The Impact of Immunostimulating Nutrition on the Outcome of Surgery |
| NCT00576940 | PHASE4 | COMPLETED | Standard and Immunostimulating Enteral Nutrition in Surgical Patients |
| NCT00666978 | PHASE4 | COMPLETED | Health Education Counseling With or Without Bupropion in Helping African Americans Stop Smoking |
| NCT01038154 | PHASE4 | UNKNOWN | Study to Evaluate the Efficacy of Pravastatin on Survival and Recurrence of Advanced Gastroesophageal Cancer |
| NCT01234272 | PHASE4 | COMPLETED | Comparison of the Analgesic Effect Between Intrathecal Morphine and IV-fentanyl Patient Controlled Analgesia (ITM-IVPCA) and Epidural PCA (PCEA) in Patients Undergoing Gastrectomy -Randomized Allocation Study- |
| NCT01260194 | PHASE4 | TERMINATED | A Study of Herceptin (Trastuzumab) in Combination With Standard Chemotherapy in Patients With HER Positive Metastatic Gastric Cancer |
| NCT01271582 | PHASE4 | UNKNOWN | Investigation of Association Between UGT1A1 Polymorphisms and Irinotecan Toxicity in Korean Patients |
| NCT01401075 | PHASE4 | COMPLETED | RCT With Adjuvant Mistletoe Treatment in Gastric Cancer Patients |
| NCT01471756 | PHASE4 | COMPLETED | Improving Complete Endoscopic Mucosal Resection (EMR) of Colorectal Neoplasia |
| NCT01766765 | PHASE4 | UNKNOWN | Early Jejunostomy Nutrition Minimizes Time to Chemotherapy |
| NCT01910948 | PHASE4 | UNKNOWN | Perioperative Application of Omega-3 Polyunsaturated Fatty Acids in Gastric Cancer Patients |
| NCT01927328 | PHASE4 | UNKNOWN | Iron Replacement in Oesophagogastric Neoplasia |
| NCT01962272 | PHASE4 | COMPLETED | The Effect of Nutritional Counseling for Cancer Patients |
| NCT01962376 | PHASE4 | UNKNOWN | Preoperative Chemotherapy With Bevacizumab For Potentially Resectable Gastric Cancer With Liver Metastasis |
| NCT02047994 | PHASE4 | RECRUITING | Multicentric Randomized Study of H. Pylori Eradication and Pepsinogen Testing for Prevention of Gastric Cancer Mortality |
| NCT02235246 | PHASE4 | COMPLETED | The Effect of Perioperative Intravenous Magnesium on Pain After Endoscopic Submucosal Dissection for Gastric Neoplasm: Prospective Randomized Double-blind Placebo Controlled Study |
| NCT02366819 | PHASE4 | SUSPENDED | Genetic Analysis-Guided Irinotecan Hydrochloride Dosing of mFOLFIRINOX in Treating Patients With Locally Advanced Gastroesophageal or Stomach Cancer |
| NCT02401971 | PHASE4 | UNKNOWN | Irinotecan Plus Thalidomide in Second Line Advanced Gastric Cancer |
| NCT02458573 | PHASE4 | COMPLETED | Comparison of the Effects of Continuous Epidural Analgesia and Continuous Intravenous Analgesia on Postoperative Bowel Movement in Patients Undergoing Laparoscopic Gastrectomy |
| NCT02638584 | PHASE4 | COMPLETED | Effects of Ilaprazole on Ulcer Healing Rate and Prevention of Gastrointestinal Bleeding in the Patients Undergone ESD. |
| NCT02776527 | PHASE4 | UNKNOWN | A Clinical Trial of Maintenance Treatment of Apatinib in Advanced Gastric Cancer Patients Have Completed Postoprative Adjuvant Chemotherapy |
| NCT03384511 | PHASE4 | COMPLETED | The Use of 18F-ALF-NOTA-PRGD2 PET/CT Scan to Predict the Efficacy and Adverse Events of Apatinib in Malignancies. |
| NCT03550482 | PHASE4 | COMPLETED | Oncoxin® and Quality of Life in Cancer Patients |
| NCT03609892 | PHASE4 | COMPLETED | Helicobacter Rescue Therapy With Berberine Plus Amoxicillin Quadruple Therapy Versus Tetracycline Plus Furazolidone Quadruple Therapy |
| NCT03642093 | PHASE4 | UNKNOWN | HOPE - A Study to Evaluate the Effect of a Prehabilitation Program on GI Cancer Patients Planning to Undergo Surgery |
| NCT03733639 | PHASE4 | UNKNOWN | Tisseel® as a Reinforcement of Esophagojejunal Anastomoses |
| NCT04168346 | PHASE4 | NOT_YET_RECRUITING | Preoperative Intravenous Iron Therapy in Patients With Gastric Cancer |
| NCT04209933 | PHASE4 | COMPLETED | Helicobacter Pylori Eradication With Different Bismuth Quadruple Therapies |
| NCT04591028 | PHASE4 | WITHDRAWN | A Study to Evaluate Indocyanine Green Lymphangiography to Improve Lymphadenectomy in Gastric Cancer Patients |
| NCT04607057 | PHASE4 | UNKNOWN | Supplemental Parenteral Nutrition During Postgastrectomy in Nutritionally at Risk Patient |
| NCT04660123 | PHASE4 | COMPLETED | A Real World Study of Bismuth Colloidal Pectin Granules Quadruple Therapy for H. Pylori Eradication |
| NCT04678492 | PHASE4 | COMPLETED | Helicobacter Rescue Therapy With High-dose Esomeprazole and Amoxicillin Dual Therapy Versus Bismuth-containing Quadruple Therapy |
| NCT04697186 | PHASE4 | COMPLETED | Helicobacter Pylori Eradication With Berberine Plus Amoxicillin Triple Therapy Versus Bismuth-containing Quadruple Therapy |
| NCT05029453 | PHASE4 | UNKNOWN | Apatinib Combined With Chemotherapy Versus Chemotherapy in Second-line Gastric Cancer Receiving Prior Anti-PD-1 Therapy |
| NCT05183126 | PHASE4 | RECRUITING | Pharmacokinetic Study of Skeletal Muscle Area-based Paclitaxel Infusion in Patients With Cancer |
| NCT05354856 | PHASE4 | TERMINATED | The Effect of Chemoradiotherapy on Gastric Perfusion in Patients With Gastric Cancer. |
| NCT05410535 | PHASE4 | COMPLETED | To Evaluate Efficacy of Ursodeoxycholic Acid (UDCA) for the Prevention of Gallstone Formation After Gasterectomy |
| NCT05498766 | PHASE4 | NOT_YET_RECRUITING | Effect and Safety of Huaier Granule Versus SOX Regimen in Gastric Cancer Patients |
| NCT05518929 | PHASE4 | COMPLETED | Hypoxia During Gastroenterological Endoscope Procedures Sedated With Ciprofol In Overweight Or Obesity Patients |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cocaine dependence, gastric cancer