CDC37L1-DT

Summary

CDC37L1-DT (CDC37L1 divergent transcript, HGNC:49735) is a long non-coding RNA gene on chromosome 9p24.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49735
Approved symbol	CDC37L1-DT
Name	CDC37L1 divergent transcript
Location	9p24.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000273061
Ensembl biotype	lncRNA
Entrez	101929351
RNAcentral	URS000075E127 — lncRNA, 332 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000607997, ENST00000609131, ENST00000835203, ENST00000835204, ENST00000835205, ENST00000835206, ENST00000835207, ENST00000835208, ENST00000835209, ENST00000835210, ENST00000835211, ENST00000835212

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000607997 — 2 exons

Exon	Start	End
ENSE00004253479	4679387	4679547
ENSE00004253490	4678551	4679165

Expression profiles

Bgee: expression breadth ubiquitous, 135 present calls, max score 92.41.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 3.6987 / max 96.6072, expressed in 1349 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
99803	3.6987	1349

Top tissues by expression

137 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.41	gold quality
thymus	UBERON:0002370	91.42	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.89	gold quality
pituitary gland	UBERON:0000007	85.64	gold quality
right uterine tube	UBERON:0001302	85.54	gold quality
adenohypophysis	UBERON:0002196	85.11	gold quality
right lobe of liver	UBERON:0001114	83.64	gold quality
left testis	UBERON:0004533	83.59	gold quality
testis	UBERON:0000473	83.31	gold quality
corpus callosum	UBERON:0002336	83.30	gold quality
right testis	UBERON:0004534	83.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	82.92	gold quality
spinal cord	UBERON:0002240	82.73	gold quality
right adrenal gland	UBERON:0001233	82.70	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	82.70	gold quality
right adrenal gland cortex	UBERON:0035827	82.67	gold quality
left adrenal gland cortex	UBERON:0035825	82.23	gold quality
liver	UBERON:0002107	82.20	gold quality
cerebellar vermis	UBERON:0004720	82.19	gold quality
substantia nigra	UBERON:0002038	82.06	gold quality
left adrenal gland	UBERON:0001234	81.73	gold quality
quadriceps femoris	UBERON:0001377	81.17	gold quality
adrenal gland	UBERON:0002369	80.95	gold quality
islet of Langerhans	UBERON:0000006	80.49	gold quality
pancreas	UBERON:0001264	80.23	gold quality
body of pancreas	UBERON:0001150	80.13	gold quality
mucosa of transverse colon	UBERON:0004991	79.80	gold quality
adult mammalian kidney	UBERON:0000082	79.71	gold quality
hypothalamus	UBERON:0001898	79.37	gold quality
metanephros cortex	UBERON:0010533	79.06	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.