CDH23-AS1

Summary

CDH23-AS1 (CDH23 antisense RNA 1, HGNC:31433) is a long non-coding RNA gene on chromosome 10q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:31433
Approved symbol	CDH23-AS1
Name	CDH23 antisense RNA 1
Location	10q22.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	bA327E2.3
Ensembl gene	ENSG00000223817
Ensembl biotype	lncRNA
Entrez	102723377
RNAcentral	URS000075E11A — lncRNA, 425 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000428918

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000428918 — 3 exons

Exon	Start	End
ENSE00001605157	71509915	71510010
ENSE00001764845	71508153	71508338
ENSE00001797698	71511778	71511873

Expression profiles

Bgee: expression breadth broad, 51 present calls, max score 66.84.

Top tissues by expression

51 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
blood	UBERON:0000178	66.84	gold quality
monocyte	CL:0000576	65.41	gold quality
thoracic mammary gland	UBERON:0005200	62.24	silver quality
prefrontal cortex	UBERON:0000451	60.23	gold quality
liver	UBERON:0002107	60.03	gold quality
gall bladder	UBERON:0002110	57.81	gold quality
endometrium	UBERON:0001295	57.15	silver quality
calcaneal tendon	UBERON:0003701	55.34	gold quality
cortex of kidney	UBERON:0001225	55.04	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	50.27	gold quality
gastrocnemius	UBERON:0001388	49.44	gold quality
Ammon’s horn	UBERON:0001954	49.42	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	48.37	gold quality
heart left ventricle	UBERON:0002084	48.12	gold quality
right testis	UBERON:0004534	47.39	gold quality
left testis	UBERON:0004533	46.76	gold quality
testis	UBERON:0000473	46.73	gold quality
body of pancreas	UBERON:0001150	46.69	gold quality
amygdala	UBERON:0001876	46.61	gold quality
left lobe of thyroid gland	UBERON:0001120	46.54	gold quality
lower esophagus	UBERON:0013473	46.52	gold quality
multicellular organism	UBERON:0000468	45.80	gold quality
subcutaneous adipose tissue	UBERON:0002190	45.75	gold quality
tibial artery	UBERON:0007610	45.51	gold quality
body of stomach	UBERON:0001161	45.00	gold quality
omental fat pad	UBERON:0010414	44.86	silver quality
left coronary artery	UBERON:0001626	44.73	silver quality
anterior cingulate cortex	UBERON:0009835	44.44	gold quality
minor salivary gland	UBERON:0001830	44.43	silver quality
caudate nucleus	UBERON:0001873	44.42	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.