CDH4-AS2

Summary

CDH4-AS2 (CDH4 antisense RNA 2, HGNC:58218) is a long non-coding RNA gene on chromosome 20q13.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58218
Approved symbol	CDH4-AS2
Name	CDH4 antisense RNA 2
Location	20q13.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000179253
Ensembl biotype	lncRNA
Entrez	100128310
RNAcentral	URS00007CB9E7 — lncRNA, 2000 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000317652

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000317652 — 2 exons

Exon	Start	End
ENSE00001237722	61719630	61719748
ENSE00001237731	61717506	61719386

Expression profiles

Bgee: expression breadth broad, 62 present calls, max score 62.80.

Top tissues by expression

62 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
leukocyte	CL:0000738	62.80	gold quality
ventricular zone	UBERON:0003053	62.17	gold quality
granulocyte	CL:0000094	59.63	gold quality
ganglionic eminence	UBERON:0004023	58.73	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	56.69	gold quality
lymph node	UBERON:0000029	56.12	gold quality
blood	UBERON:0000178	54.40	gold quality
urinary bladder	UBERON:0001255	52.87	gold quality
saliva-secreting gland	UBERON:0001044	51.09	silver quality
muscle of leg	UBERON:0001383	50.46	silver quality
prefrontal cortex	UBERON:0000451	50.23	silver quality
endometrium	UBERON:0001295	50.16	silver quality
duodenum	UBERON:0002114	49.26	gold quality
gastrocnemius	UBERON:0001388	48.87	gold quality
bone marrow	UBERON:0002371	48.85	silver quality
right lobe of liver	UBERON:0001114	48.66	silver quality
vermiform appendix	UBERON:0001154	48.58	gold quality
tonsil	UBERON:0002372	48.23	gold quality
multicellular organism	UBERON:0000468	47.93	gold quality
fallopian tube	UBERON:0003889	46.85	gold quality
adrenal gland	UBERON:0002369	46.41	silver quality
gall bladder	UBERON:0002110	46.10	silver quality
lung	UBERON:0002048	45.51	silver quality
ovary	UBERON:0000992	45.01	gold quality
superior frontal gyrus	UBERON:0002661	44.67	silver quality
right atrium auricular region	UBERON:0006631	44.60	gold quality
temporal lobe	UBERON:0001871	44.22	gold quality
tibial artery	UBERON:0007610	43.58	silver quality
spleen	UBERON:0002106	43.38	gold quality
skin of abdomen	UBERON:0001416	43.30	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.