CEDORA

Summary

CEDORA (CDH13 antisense oligodendrocyte and neuron associated lncRNA, HGNC:56653) is a long non-coding RNA gene on chromosome 16q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56653
Approved symbol	CEDORA
Name	CDH13 antisense oligodendrocyte and neuron associated lncRNA
Location	16q23.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-298D21.1, FEDORA
Ensembl gene	ENSG00000260788
Ensembl biotype	lncRNA
Entrez	124903732
RNAcentral	URS00026A1EAC — lncRNA, 1648 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 11 — 11 lncRNA

ENST00000563981, ENST00000567860, ENST00000569165, ENST00000570056, ENST00000654587, ENST00000664525, ENST00000667932, ENST00000669198, ENST00000670287, ENST00000702290, ENST00000717702

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563981 — 4 exons

Exon	Start	End
ENSE00002587005	83728868	83728999
ENSE00002625464	83725475	83725588
ENSE00002628848	83720403	83721650
ENSE00004033192	83772809	83772936

Expression profiles

Bgee: expression breadth ubiquitous, 112 present calls, max score 93.19.

Top tissues by expression

112 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
corpus callosum	UBERON:0002336	93.19	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	91.26	gold quality
substantia nigra	UBERON:0002038	88.94	gold quality
Ammon’s horn	UBERON:0001954	84.49	gold quality
putamen	UBERON:0001874	83.58	gold quality
primary visual cortex	UBERON:0002436	79.78	gold quality
sural nerve	UBERON:0015488	79.03	gold quality
caudate nucleus	UBERON:0001873	78.25	gold quality
hypothalamus	UBERON:0001898	78.05	gold quality
Brodmann (1909) area 9	UBERON:0013540	77.29	gold quality
amygdala	UBERON:0001876	75.96	gold quality
temporal lobe	UBERON:0001871	75.93	gold quality
brain	UBERON:0000955	73.99	gold quality
cerebral cortex	UBERON:0000956	73.69	gold quality
prefrontal cortex	UBERON:0000451	73.29	gold quality
frontal cortex	UBERON:0001870	72.44	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	72.41	gold quality
right frontal lobe	UBERON:0002810	71.14	gold quality
colonic epithelium	UBERON:0000397	69.90	silver quality
superior frontal gyrus	UBERON:0002661	69.28	gold quality
skeletal muscle tissue	UBERON:0001134	69.20	gold quality
nucleus accumbens	UBERON:0001882	68.80	gold quality
anterior cingulate cortex	UBERON:0009835	67.64	gold quality
calcaneal tendon	UBERON:0003701	67.18	gold quality
right hemisphere of cerebellum	UBERON:0014890	67.06	gold quality
cerebellum	UBERON:0002037	65.96	gold quality
cerebellar cortex	UBERON:0002129	65.85	gold quality
cerebellar hemisphere	UBERON:0002245	65.76	gold quality
cortical plate	UBERON:0005343	64.39	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.78

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.