CENPN-AS1

Summary

CENPN-AS1 (CENPN antisense RNA 1, HGNC:55106) is a long non-coding RNA gene on chromosome 16q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55106
Approved symbol	CENPN-AS1
Name	CENPN antisense RNA 1
Location	16q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260213
Ensembl biotype	lncRNA
Entrez	107984858
RNAcentral	URS0000DBB156 — lncRNA, 2535 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000561808, ENST00000562315, ENST00000566390, ENST00000649061

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000561808 — 3 exons

Exon	Start	End
ENSE00002594280	81024055	81024605
ENSE00002605635	81034755	81034926
ENSE00002607693	81035669	81035734

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 79.23.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right testis	UBERON:0004534	79.23	gold quality
left testis	UBERON:0004533	79.17	gold quality
testis	UBERON:0000473	78.77	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.90	gold quality
sural nerve	UBERON:0015488	70.86	gold quality
colonic epithelium	UBERON:0000397	69.51	silver quality
bone marrow cell	CL:0002092	68.44	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	68.20	gold quality
cortical plate	UBERON:0005343	67.89	gold quality
substantia nigra	UBERON:0002038	66.99	gold quality
putamen	UBERON:0001874	64.94	gold quality
stromal cell of endometrium	CL:0002255	64.45	gold quality
bone marrow	UBERON:0002371	63.91	gold quality
amygdala	UBERON:0001876	63.69	gold quality
temporal lobe	UBERON:0001871	63.48	gold quality
ganglionic eminence	UBERON:0004023	63.32	gold quality
Ammon’s horn	UBERON:0001954	62.40	gold quality
ventricular zone	UBERON:0003053	61.24	gold quality
muscle tissue	UBERON:0002385	61.14	gold quality
prefrontal cortex	UBERON:0000451	61.01	gold quality
caudate nucleus	UBERON:0001873	60.88	gold quality
hypothalamus	UBERON:0001898	60.65	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.36	gold quality
nucleus accumbens	UBERON:0001882	59.82	gold quality
cerebral cortex	UBERON:0000956	58.94	gold quality
frontal cortex	UBERON:0001870	58.90	gold quality
brain	UBERON:0000955	58.76	gold quality
monocyte	CL:0000576	58.46	gold quality
leukocyte	CL:0000738	58.39	gold quality
anterior cingulate cortex	UBERON:0009835	58.38	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.69

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.