CEP83-DT

Summary

CEP83-DT (CEP83 divergent transcript, HGNC:27055) is a long non-coding RNA gene on chromosome 12q22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27055
Approved symbol	CEP83-DT
Name	CEP83 divergent transcript
Location	12q22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000278916
Ensembl biotype	lncRNA
Entrez	144486
RNAcentral	URS000075B1AA — lncRNA, 2568 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000623122

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000623122 — 1 exons

Exon	Start	End
ENSE00004116528	94460000	94462484

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 81.93.

FANTOM5 (CAGE): breadth broad, TPM avg 1.0560 / max 64.5052, expressed in 542 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
127418	0.6241	312
127417	0.2552	112
127416	0.1768	69

Top tissues by expression

236 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.93	gold quality
sperm	CL:0000019	78.29	silver quality
left testis	UBERON:0004533	77.68	gold quality
right testis	UBERON:0004534	77.13	gold quality
testis	UBERON:0000473	75.31	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	67.64	gold quality
pancreatic ductal cell	CL:0002079	67.44	silver quality
hindlimb stylopod muscle	UBERON:0004252	62.08	gold quality
ganglionic eminence	UBERON:0004023	61.96	gold quality
ventricular zone	UBERON:0003053	61.58	gold quality
adult organism	UBERON:0007023	61.54	silver quality
cortical plate	UBERON:0005343	59.76	gold quality
endothelial cell	CL:0000115	58.51	gold quality
myocardium	UBERON:0002349	56.32	gold quality
cerebellar vermis	UBERON:0004720	56.17	gold quality
tibialis anterior	UBERON:0001385	55.83	silver quality
islet of Langerhans	UBERON:0000006	55.69	gold quality
epithelial cell of pancreas	CL:0000083	55.55	gold quality
cartilage tissue	UBERON:0002418	55.27	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
vena cava	UBERON:0004087	54.19	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
buccal mucosa cell	CL:0002336	53.84	gold quality
middle temporal gyrus	UBERON:0002771	53.78	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
Brodmann (1909) area 23	UBERON:0013554	53.23	gold quality
Brodmann (1909) area 46	UBERON:0006483	53.02	gold quality
calcaneal tendon	UBERON:0003701	52.50	silver quality
stromal cell of endometrium	CL:0002255	52.29	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.73

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.